| Clone Name | bast58c02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ577361.1|HVU577361 Hordeum vulgare partial mRNA for beta3-glucuronyltransferase (pglcat4 gene), clone 1 Length = 1300 Score = 920 bits (464), Expect = 0.0 Identities = 470/472 (99%) Strand = Plus / Plus Query: 1 caccacagccgccgccgaggcccacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 293 caccacagccgccgccgaggcccacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 352 Query: 61 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacacccactt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 353 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacacccactt 412 Query: 121 cttcgatgagatccgccagatcgaggcgtttgggacatggccggtggcaacgatgtccgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 cttcgatgagatccgccagatcgaggcgtttgggacatggccggtggcaacgatgtccgc 472 Query: 181 tggagagaagaaggttgtggttgagggcccaatgtgcagcgcctcgaaggtagtcggctg 240 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 473 tggagagaagaaggttgtggttgagggcccactgtgcagcgcctcgaaggtagtcggatg 532 Query: 241 gttctcgaggaacttcaatgatggtaccactcgttcagtgacatataacactgaggttga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 gttctcgaggaacttcaatgatggtaccactcgttcagtgacatataacactgaggttga 592 Query: 301 cttgaatcctgccggtgctgctggcacgcgagcccacacgatcgatgtatcggggtttgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 cttgaatcctgccggtgctgctggcacgcgagcccacacgatcgatgtatcggggtttgc 652 Query: 361 tttcaacagttctattttgtgggaccctgagcggtggggacgaccgacgtcattaccgga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 tttcaacagttctattttgtgggaccctgagcggtggggacgaccgacgtcattaccgga 712 Query: 421 cacttcccaggattcaatcaagtttgtgcaggaggtggtgctggaggacagg 472 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 cacttcccaggattcaatcaagtttgtgcaggaggtggtgctggaggacagg 764
>emb|AJ577569.1|TAE577569 Triticum aestivum partial mRNA for beta3-glucuronyltransferase (pglcat4 gene) Length = 1181 Score = 801 bits (404), Expect = 0.0 Identities = 455/472 (96%) Strand = Plus / Plus Query: 1 caccacagccgccgccgaggcccacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 216 caccaccgccgccgccgaggcccacgcgcagcgcaacgccgcgctcgcgcacgtcgagaa 275 Query: 61 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacacccactt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 gcaccgtctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacacccactt 335 Query: 121 cttcgatgagatccgccagatcgaggcgtttgggacatggccggtggcaacgatgtccgc 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 cttcgaggagatccgccagatcgaggcgtttgggacatggccggtggcaacgatgtccgc 395 Query: 181 tggagagaagaaggttgtggttgagggcccaatgtgcagcgcctcgaaggtagtcggctg 240 || |||||||| || ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 396 gggcgagaagaaagtagtggttgagggcccactgtgcagcgcctcgaaggtagtcggctg 455 Query: 241 gttctcgaggaacttcaatgatggtaccactcgttcagtgacatataacactgaggttga 300 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 456 gttctcgaggaacttcaatgatggtaccacccgttcagtgacatataacactgaggttga 515 Query: 301 cttgaatcctgccggtgctgctggcacgcgagcccacacgatcgatgtatcggggtttgc 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 516 cttgaatcctgccggtgctgctggcacgcgagcccacacgatcgatgtatcagggtttgc 575 Query: 361 tttcaacagttctattttgtgggaccctgagcggtggggacgaccgacgtcattaccgga 420 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 576 gttcaacagttctattttgtgggaccctgagcgatggggacgaccgacgtcattaccgga 635 Query: 421 cacttcccaggattcaatcaagtttgtgcaggaggtggtgctggaggacagg 472 |||||| ||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 636 cacttcacaggactcgatcaagtttgtgcaagaggtggtgctggaggacagg 687
>ref|XM_475525.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1116 Score = 515 bits (260), Expect = e-143 Identities = 407/456 (89%) Strand = Plus / Plus Query: 1 caccacagccgccgccgaggcccacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 60 |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 531 caccaccgccgacgccgaggcgcacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 590 Query: 61 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacacccactt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 591 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacgcccattt 650 Query: 121 cttcgatgagatccgccagatcgaggcgtttgggacatggccggtggcaacgatgtccgc 180 |||||| |||||||||||||||||||| ||||| |||||||| |||||||| ||||| || Sbjct: 651 cttcgacgagatccgccagatcgaggcatttggcacatggccagtggcaacaatgtcggc 710 Query: 181 tggagagaagaaggttgtggttgagggcccaatgtgcagcgcctcgaaggtagtcggctg 240 || |||||||| || || || |||||||| | ||||| | ||| ||||| ||||| || Sbjct: 711 aggcgagaagaaagtggtagtcgagggcccgctatgcagtgactccaaggttgtcggttg 770 Query: 241 gttctcgaggaacttcaatgatggtaccactcgttcagtgacatataacactgaggttga 300 |||||||||| ||||||||||||| ||||| ||| |||||||||||||||| |||| || Sbjct: 771 gttctcgagggacttcaatgatgggaccacccgtgcagtgacatataacacagaggcgga 830 Query: 301 cttgaatcctgccggtgctgctggcacgcgagcccacacgatcgatgtatcggggtttgc 360 |||||||||||| |||||||||||||||||||| |||||||| || || || |||||||| Sbjct: 831 cttgaatcctgctggtgctgctggcacgcgagctcacacgattgacgtctcagggtttgc 890 Query: 361 tttcaacagttctattttgtgggaccctgagcggtggggacgaccgacgtcattaccgga 420 ||||||||||||||||||||||| || ||||| ||||| | |||||||||||||| || Sbjct: 891 gttcaacagttctattttgtgggatcccgagcgttggggcaggccgacgtcattaccaga 950 Query: 421 cacttcccaggattcaatcaagtttgtgcaggaggt 456 |||||| |||||||| |||||||||||||| ||||| Sbjct: 951 cacttcacaggattccatcaagtttgtgcaagaggt 986
>dbj|AK120892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029N22, full insert sequence Length = 1780 Score = 515 bits (260), Expect = e-143 Identities = 407/456 (89%) Strand = Plus / Plus Query: 1 caccacagccgccgccgaggcccacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 60 |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 846 caccaccgccgacgccgaggcgcacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 905 Query: 61 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacacccactt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 906 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacgcccattt 965 Query: 121 cttcgatgagatccgccagatcgaggcgtttgggacatggccggtggcaacgatgtccgc 180 |||||| |||||||||||||||||||| ||||| |||||||| |||||||| ||||| || Sbjct: 966 cttcgacgagatccgccagatcgaggcatttggcacatggccagtggcaacaatgtcggc 1025 Query: 181 tggagagaagaaggttgtggttgagggcccaatgtgcagcgcctcgaaggtagtcggctg 240 || |||||||| || || || |||||||| | ||||| | ||| ||||| ||||| || Sbjct: 1026 aggcgagaagaaagtggtagtcgagggcccgctatgcagtgactccaaggttgtcggttg 1085 Query: 241 gttctcgaggaacttcaatgatggtaccactcgttcagtgacatataacactgaggttga 300 |||||||||| ||||||||||||| ||||| ||| |||||||||||||||| |||| || Sbjct: 1086 gttctcgagggacttcaatgatgggaccacccgtgcagtgacatataacacagaggcgga 1145 Query: 301 cttgaatcctgccggtgctgctggcacgcgagcccacacgatcgatgtatcggggtttgc 360 |||||||||||| |||||||||||||||||||| |||||||| || || || |||||||| Sbjct: 1146 cttgaatcctgctggtgctgctggcacgcgagctcacacgattgacgtctcagggtttgc 1205 Query: 361 tttcaacagttctattttgtgggaccctgagcggtggggacgaccgacgtcattaccgga 420 ||||||||||||||||||||||| || ||||| ||||| | |||||||||||||| || Sbjct: 1206 gttcaacagttctattttgtgggatcccgagcgttggggcaggccgacgtcattaccaga 1265 Query: 421 cacttcccaggattcaatcaagtttgtgcaggaggt 456 |||||| |||||||| |||||||||||||| ||||| Sbjct: 1266 cacttcacaggattccatcaagtttgtgcaagaggt 1301
>emb|AJ969049.1| Saccharum officinarum mRNA for glycosyltransferase (pglcat4 gene) Length = 2057 Score = 387 bits (195), Expect = e-104 Identities = 393/459 (85%) Strand = Plus / Plus Query: 1 caccacagccgccgccgaggcccacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 60 |||||| |||| ||||||||| |||| |||||| |||||||||||||| || |||||||| Sbjct: 1045 caccaccgccgacgccgaggctcacgtgcagcggaacgccgcgctcgcgcatgtcgagaa 1104 Query: 61 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacacccactt 120 |||||| ||| |||||||| | |||||||||||||||||||||||||||||| | || Sbjct: 1105 gcaccgactcgccggcgtcctgcacttcgccgacgccgccggcgtctacgacgtcggatt 1164 Query: 121 cttcgatgagatccgccagatcgaggcgtttgggacatggccggtggcaacgatgtccgc 180 |||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||| || Sbjct: 1165 cttcgaccagatccgccagatcgaggcgtttggcacatggcctgtggcaacaatgtcggc 1224 Query: 181 tggagagaagaaggttgtggttgagggcccaatgtgcagcgcctcgaaggtagtcggctg 240 || |||||||| || || || || || ||| | ||||| ||||| ||||||||||| || Sbjct: 1225 aggcgagaagaaagtggtagtggaaggtccactatgcagtgcctcaaaggtagtcggttg 1284 Query: 241 gttctcgaggaacttcaatgatggtaccactcgttcagtgacatataacactgaggttga 300 |||||| ||| |||| || ||||| ||||| ||||||||||| |||||||| || ||||| Sbjct: 1285 gttctcaagggactttaacgatgggaccacccgttcagtgacgtataacacagaagttga 1344 Query: 301 cttgaatcctgccggtgctgctggcacgcgagcccacacgatcgatgtatcggggtttgc 360 |||||||||||| ||||||||||| || |||||||||||||| || || || || || || Sbjct: 1345 cttgaatcctgctggtgctgctggtacacgagcccacacgattgacgtctcaggcttcgc 1404 Query: 361 tttcaacagttctattttgtgggaccctgagcggtggggacgaccgacgtcattaccgga 420 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||||| || Sbjct: 1405 gttcaacagttcaattttgtgggatcctgagcggtggggacggccaacgtctttaccaga 1464 Query: 421 cacttcccaggattcaatcaagtttgtgcaggaggtggt 459 ||||| ||||| || |||||||||||||| || ||||| Sbjct: 1465 tacttcacaggactccatcaagtttgtgcaagaagtggt 1503
>gb|AC079021.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0008A07, complete sequence Length = 135809 Score = 244 bits (123), Expect = 2e-61 Identities = 243/283 (85%) Strand = Plus / Plus Query: 149 tttgggacatggccggtggcaacgatgtccgctggagagaagaaggttgtggttgagggc 208 ||||| |||||||| |||||||| ||||| || || |||||||| || || || |||||| Sbjct: 17757 tttggcacatggccagtggcaacaatgtcggcaggcgagaagaaagtggtagtcgagggc 17816 Query: 209 ccaatgtgcagcgcctcgaaggtagtcggctggttctcgaggaacttcaatgatggtacc 268 || | ||||| | ||| ||||| ||||| |||||||||||| ||||||||||||| ||| Sbjct: 17817 ccgctatgcagtgactccaaggttgtcggttggttctcgagggacttcaatgatgggacc 17876 Query: 269 actcgttcagtgacatataacactgaggttgacttgaatcctgccggtgctgctggcacg 328 || ||| |||||||||||||||| |||| |||||||||||||| ||||||||||||||| Sbjct: 17877 acccgtgcagtgacatataacacagaggcggacttgaatcctgctggtgctgctggcacg 17936 Query: 329 cgagcccacacgatcgatgtatcggggtttgctttcaacagttctattttgtgggaccct 388 ||||| |||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 17937 cgagctcacacgattgacgtctcagggtttgcgttcaacagttctattttgtgggatccc 17996 Query: 389 gagcggtggggacgaccgacgtcattaccggacacttcccagg 431 ||||| ||||| | |||||||||||||| |||||||| |||| Sbjct: 17997 gagcgttggggcaggccgacgtcattaccagacacttcacagg 18039 Score = 240 bits (121), Expect = 3e-60 Identities = 139/145 (95%) Strand = Plus / Plus Query: 1 caccacagccgccgccgaggcccacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 60 |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14463 caccaccgccgacgccgaggcgcacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 14522 Query: 61 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacacccactt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 14523 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacgcccattt 14582 Query: 121 cttcgatgagatccgccagatcgag 145 |||||| |||||||||||||||||| Sbjct: 14583 cttcgacgagatccgccagatcgag 14607 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 428 caggattcaatcaagtttgtgcaggaggt 456 |||||||| |||||||||||||| ||||| Sbjct: 19318 caggattccatcaagtttgtgcaagaggt 19346
>emb|AJ577238.1|ZMA577238 Zea mays mRNA for putative beta3-glucuronyltransferase (pglcat4 gene), clone 1 Length = 1546 Score = 244 bits (123), Expect = 2e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 1 caccacagccgccgccgaggcccacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 60 |||||| |||| ||||||||| |||| |||||| |||||||||||||| || |||||||| Sbjct: 679 caccaccgccgacgccgaggctcacgtgcagcggaacgccgcgctcgcgcatgtcgagaa 738 Query: 61 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacacccactt 120 |||||| ||| |||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 739 gcaccgactcgccggcgtcctgcacttcgccgacgccgccggcgtctacgacacccactt 798 Query: 121 cttcgatgagatccgccagatcgaggcgtttgggacatggccggtggcaacgatgtccgc 180 |||||| ||||||||||||||||||||||| || ||||||| ||||| ||| |||| || Sbjct: 799 cttcgaggagatccgccagatcgaggcgttcggcgcatggcccgtggcgacggtgtcggc 858 Query: 181 tggagagaagaaggttgtggttgagggcccaatgtgcagcgcctcgaaggtagtcggctg 240 || ||||||||||| || || || || |||||||||||||| |||| |||||||| Sbjct: 859 gggcgagaagaaggtgacagtggaaggtccgctgtgcagcgcctcggaggtcgtcggctg 918 Query: 241 gttctcgaggaactt 255 |||||||||| |||| Sbjct: 919 gttctcgagggactt 933 Score = 65.9 bits (33), Expect = 1e-07 Identities = 89/107 (83%), Gaps = 3/107 (2%) Strand = Plus / Plus Query: 362 ttcaacagttctattttgtgggaccctgagcggtggggacgaccgacgtcat---taccg 418 |||||||| || ||| ||||||| || ||||||||||| || ||| |||| | | ||| Sbjct: 1049 ttcaacagctccattctgtgggatcccgagcggtgggggcggccggcgtcgtcgttgccg 1108 Query: 419 gacacttcccaggattcaatcaagtttgtgcaggaggtggtgctgga 465 |||||||| ||||| || |||||||| |||||||| ||||||||||| Sbjct: 1109 gacacttcacaggactccatcaagttcgtgcaggaagtggtgctgga 1155
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 244 bits (123), Expect = 2e-61 Identities = 243/283 (85%) Strand = Plus / Plus Query: 149 tttgggacatggccggtggcaacgatgtccgctggagagaagaaggttgtggttgagggc 208 ||||| |||||||| |||||||| ||||| || || |||||||| || || || |||||| Sbjct: 1222944 tttggcacatggccagtggcaacaatgtcggcaggcgagaagaaagtggtagtcgagggc 1223003 Query: 209 ccaatgtgcagcgcctcgaaggtagtcggctggttctcgaggaacttcaatgatggtacc 268 || | ||||| | ||| ||||| ||||| |||||||||||| ||||||||||||| ||| Sbjct: 1223004 ccgctatgcagtgactccaaggttgtcggttggttctcgagggacttcaatgatgggacc 1223063 Query: 269 actcgttcagtgacatataacactgaggttgacttgaatcctgccggtgctgctggcacg 328 || ||| |||||||||||||||| |||| |||||||||||||| ||||||||||||||| Sbjct: 1223064 acccgtgcagtgacatataacacagaggcggacttgaatcctgctggtgctgctggcacg 1223123 Query: 329 cgagcccacacgatcgatgtatcggggtttgctttcaacagttctattttgtgggaccct 388 ||||| |||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 1223124 cgagctcacacgattgacgtctcagggtttgcgttcaacagttctattttgtgggatccc 1223183 Query: 389 gagcggtggggacgaccgacgtcattaccggacacttcccagg 431 ||||| ||||| | |||||||||||||| |||||||| |||| Sbjct: 1223184 gagcgttggggcaggccgacgtcattaccagacacttcacagg 1223226 Score = 240 bits (121), Expect = 3e-60 Identities = 139/145 (95%) Strand = Plus / Plus Query: 1 caccacagccgccgccgaggcccacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 60 |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1219650 caccaccgccgacgccgaggcgcacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 1219709 Query: 61 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacacccactt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 1219710 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacgcccattt 1219769 Query: 121 cttcgatgagatccgccagatcgag 145 |||||| |||||||||||||||||| Sbjct: 1219770 cttcgacgagatccgccagatcgag 1219794 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 428 caggattcaatcaagtttgtgcaggaggt 456 |||||||| |||||||||||||| ||||| Sbjct: 1224505 caggattccatcaagtttgtgcaagaggt 1224533 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgacgccgccggcgtc 106 |||||||||||||||||||| Sbjct: 3209320 tcgccgacgccgccggcgtc 3209339
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 244 bits (123), Expect = 2e-61 Identities = 243/283 (85%) Strand = Plus / Plus Query: 149 tttgggacatggccggtggcaacgatgtccgctggagagaagaaggttgtggttgagggc 208 ||||| |||||||| |||||||| ||||| || || |||||||| || || || |||||| Sbjct: 73230 tttggcacatggccagtggcaacaatgtcggcaggcgagaagaaagtggtagtcgagggc 73289 Query: 209 ccaatgtgcagcgcctcgaaggtagtcggctggttctcgaggaacttcaatgatggtacc 268 || | ||||| | ||| ||||| ||||| |||||||||||| ||||||||||||| ||| Sbjct: 73290 ccgctatgcagtgactccaaggttgtcggttggttctcgagggacttcaatgatgggacc 73349 Query: 269 actcgttcagtgacatataacactgaggttgacttgaatcctgccggtgctgctggcacg 328 || ||| |||||||||||||||| |||| |||||||||||||| ||||||||||||||| Sbjct: 73350 acccgtgcagtgacatataacacagaggcggacttgaatcctgctggtgctgctggcacg 73409 Query: 329 cgagcccacacgatcgatgtatcggggtttgctttcaacagttctattttgtgggaccct 388 ||||| |||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 73410 cgagctcacacgattgacgtctcagggtttgcgttcaacagttctattttgtgggatccc 73469 Query: 389 gagcggtggggacgaccgacgtcattaccggacacttcccagg 431 ||||| ||||| | |||||||||||||| |||||||| |||| Sbjct: 73470 gagcgttggggcaggccgacgtcattaccagacacttcacagg 73512 Score = 240 bits (121), Expect = 3e-60 Identities = 139/145 (95%) Strand = Plus / Plus Query: 1 caccacagccgccgccgaggcccacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 60 |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 69936 caccaccgccgacgccgaggcgcacgcgcagcgcaacgccgcgctcgcccacgtcgagaa 69995 Query: 61 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacacccactt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 69996 gcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacgcccattt 70055 Query: 121 cttcgatgagatccgccagatcgag 145 |||||| |||||||||||||||||| Sbjct: 70056 cttcgacgagatccgccagatcgag 70080 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 428 caggattcaatcaagtttgtgcaggaggt 456 |||||||| |||||||||||||| ||||| Sbjct: 74791 caggattccatcaagtttgtgcaagaggt 74819
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 157 bits (79), Expect = 4e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 62257 gcgcaacgccgcgctcgcccacgtcgagaagcactacttctccggcgtcgtccacttcgc 62316 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 |||||||||||| ||||||||| |||| |||||||| |||||||||||| |||| Sbjct: 62317 cgacgccgccggtgtctacgacgcccatttcttcgacaagatccgccagaccgag 62371
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 157 bits (79), Expect = 4e-35 Identities = 106/115 (92%) Strand = Plus / Minus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 32681650 gcgcaacgccgcgctcgcccacgtcgagaagcactacttctccggcgtcgtccacttcgc 32681591 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 |||||||||||| ||||||||| |||| |||||||| |||||||||||| |||| Sbjct: 32681590 cgacgccgccggtgtctacgacgcccatttcttcgacaagatccgccagaccgag 32681536 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 29 cagcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttc 88 |||||||||| |||||||| ||| ||||| | ||||||||| |||||||||||| |||| Sbjct: 9919100 cagcgcaacgtcgcgctcggacacatcgagcaccaccgcctcgccggcgtcgtcctcttc 9919159 Query: 89 gccg 92 |||| Sbjct: 9919160 gccg 9919163 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 tggccggtggcaacgatgtc 177 |||||||||||||||||||| Sbjct: 9921111 tggccggtggcaacgatgtc 9921130
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 157 bits (79), Expect = 4e-35 Identities = 106/115 (92%) Strand = Plus / Minus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 32772160 gcgcaacgccgcgctcgcccacgtcgagaagcactacttctccggcgtcgtccacttcgc 32772101 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 |||||||||||| ||||||||| |||| |||||||| |||||||||||| |||| Sbjct: 32772100 cgacgccgccggtgtctacgacgcccatttcttcgacaagatccgccagaccgag 32772046 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 29 cagcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttc 88 |||||||||| |||||||| ||| ||||| | ||||||||| |||||||||||| |||| Sbjct: 9917221 cagcgcaacgtcgcgctcggacacatcgagcaccaccgcctcgccggcgtcgtcctcttc 9917280 Query: 89 gccg 92 |||| Sbjct: 9917281 gccg 9917284 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 tggccggtggcaacgatgtc 177 |||||||||||||||||||| Sbjct: 9919232 tggccggtggcaacgatgtc 9919251
>ref|XM_469957.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1358 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 578 gcgcaacgccgcgctcgcccacgtcgagaagcactacttctccggcgtcgtccacttcgc 637 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccaga 140 |||||||||||| ||||||||| |||| |||||||| |||||||||||| Sbjct: 638 cgacgccgccggtgtctacgacgcccatttcttcgacaagatccgccaga 687
>dbj|AK067897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123L13, full insert sequence Length = 1359 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 579 gcgcaacgccgcgctcgcccacgtcgagaagcactacttctccggcgtcgtccacttcgc 638 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccaga 140 |||||||||||| ||||||||| |||| |||||||| |||||||||||| Sbjct: 639 cgacgccgccggtgtctacgacgcccatttcttcgacaagatccgccaga 688
>ref|XM_478943.1| Oryza sativa (japonica cultivar-group), mRNA Length = 926 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 |||||||||||||||||||||||||||||||||| | || ||||||||||||||||||| Sbjct: 572 gcgcaacgccgcgctcgcccacgtcgagaagcactacttccccggcgtcgtccacttcgc 631 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 |||||||||||| ||||||||| |||| |||||||| |||||||||||| |||| Sbjct: 632 cgacgccgccggtgtctacgacgcccatttcttcgacaagatccgccagaccgag 686
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 ||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||| Sbjct: 110420 gcgcaacgccgcgctcgcccacgtcgacaagcactacttctccggcgtcgtccacttcgc 110479 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 |||||||||||| ||||||||| |||| |||||||| |||||||||||| |||| Sbjct: 110480 cgacgccgccggtgtctacgacgcccatttcttcgacaagatccgccagaccgag 110534
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 ||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||| Sbjct: 2334421 gcgcaacgccgcgctcgcccacgtcgacaagcactacttctccggcgtcgtccacttcgc 2334480 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 |||||||||||| ||||||||| |||| |||||||| |||||||||||| |||| Sbjct: 2334481 cgacgccgccggtgtctacgacgcccatttcttcgacaagatccgccagaccgag 2334535
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 |||||||||||||||||||||||||||||||||| | || ||||||||||||||||||| Sbjct: 23938393 gcgcaacgccgcgctcgcccacgtcgagaagcactacttccccggcgtcgtccacttcgc 23938452 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 |||||||||||| ||||||||| |||| |||||||| |||||||||||| |||| Sbjct: 23938453 cgacgccgccggtgtctacgacgcccatttcttcgacaagatccgccagaccgag 23938507
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 |||||||||||||||||||||||||||||||||| | || ||||||||||||||||||| Sbjct: 93320 gcgcaacgccgcgctcgcccacgtcgagaagcactacttccccggcgtcgtccacttcgc 93379 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 |||||||||||| ||||||||| |||| |||||||| |||||||||||| |||| Sbjct: 93380 cgacgccgccggtgtctacgacgcccatttcttcgacaagatccgccagaccgag 93434
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 ||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||| Sbjct: 2342202 gcgcaacgccgcgctcgcccacgtcgacaagcactacttctccggcgtcgtccacttcgc 2342261 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 |||||||||||| ||||||||| |||| |||||||| |||||||||||| |||| Sbjct: 2342262 cgacgccgccggtgtctacgacgcccatttcttcgacaagatccgccagaccgag 2342316
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 141 bits (71), Expect = 2e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||| Sbjct: 56137 gcgcaacgccgcgctcgcccatgtcgagaagcaccgcctcttcagcgtcgtccacttcgc 56196 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 | |||| ||| ||||||||| || | ||||||||||||||||||||||||||| Sbjct: 56197 ccacgcaagcggtgtctacgacgcctatttcttcgatgagatccgccagatcgag 56251
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 141 bits (71), Expect = 2e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||| Sbjct: 34602016 gcgcaacgccgcgctcgcccatgtcgagaagcaccgcctcttcagcgtcgtccacttcgc 34602075 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 | |||| ||| ||||||||| || | ||||||||||||||||||||||||||| Sbjct: 34602076 ccacgcaagcggtgtctacgacgcctatttcttcgatgagatccgccagatcgag 34602130 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Plus Query: 34 caacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgccga 93 ||||||||| |||| | |||||| || ||||||||| ||||||| || |||||||||| Sbjct: 207495 caacgccgccctcgacatcgtcgacaaccaccgcctcgacggcgtcctctacttcgccga 207554 Query: 94 cg 95 || Sbjct: 207555 cg 207556
>dbj|AK067186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094J18, full insert sequence Length = 925 Score = 141 bits (71), Expect = 2e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 |||||||||||||||||||||||||||||||||| | || ||||||||||||||| ||| Sbjct: 571 gcgcaacgccgcgctcgcccacgtcgagaagcactacttccccggcgtcgtccactccgc 630 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 |||||||||||| ||||||||| |||| |||||||| |||||||||||| |||| Sbjct: 631 cgacgccgccggtgtctacgacgcccatttcttcgacaagatccgccagaccgag 685
>emb|AL732350.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0101F08, complete sequence Length = 63897 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 |||||| |||||||||||||| ||| ||||||||||||||| |||||||||||||||||| Sbjct: 55798 gcgcaatgccgcgctcgcccatgtcaagaagcaccgcctcttcggcgtcgtccacttcgc 55857 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 | |||| ||| ||||||||| || | |||||| |||||||||||||||||||| Sbjct: 55858 ccacgcaagcggtgtctacgacgcctatttcttcaatgagatccgccagatcgag 55912
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 31 gcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgc 90 |||||| |||||||||||||| ||| ||||||||||||||| |||||||||||||||||| Sbjct: 6731 gcgcaatgccgcgctcgcccatgtcaagaagcaccgcctcttcggcgtcgtccacttcgc 6790 Query: 91 cgacgccgccggcgtctacgacacccacttcttcgatgagatccgccagatcgag 145 | |||| ||| ||||||||| || | |||||| |||||||||||||||||||| Sbjct: 6791 ccacgcaagcggtgtctacgacgcctatttcttcaatgagatccgccagatcgag 6845
>gb|BT017346.1| Zea mays clone EL01N0323D05.c mRNA sequence Length = 1125 Score = 65.9 bits (33), Expect = 1e-07 Identities = 89/107 (83%), Gaps = 3/107 (2%) Strand = Plus / Plus Query: 362 ttcaacagttctattttgtgggaccctgagcggtggggacgaccgacgtcat---taccg 418 |||||||| || ||| ||||||| || ||||||||||| || ||| |||| | | ||| Sbjct: 628 ttcaacagctccattctgtgggatcccgagcggtgggggcggccggcgtcgtcgttgccg 687 Query: 419 gacacttcccaggattcaatcaagtttgtgcaggaggtggtgctgga 465 |||||||| ||||| || |||||||| |||||||| ||||||||||| Sbjct: 688 gacacttcacaggactccatcaagttcgtgcaggaagtggtgctgga 734 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 213 tgtgcagcgcctcgaaggtagtcggctggttctcgaggaactt 255 |||||||||||||| |||| |||||||||||||||||| |||| Sbjct: 470 tgtgcagcgcctcggaggtcgtcggctggttctcgagggactt 512
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 29 cagcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttc 88 |||||||||| |||||||| ||| ||||| | ||||||||| |||||||||||| |||| Sbjct: 81489 cagcgcaacgtcgcgctcggacacatcgagcaccaccgcctcgccggcgtcgtcctcttc 81548 Query: 89 gccg 92 |||| Sbjct: 81549 gccg 81552 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 tggccggtggcaacgatgtc 177 |||||||||||||||||||| Sbjct: 83500 tggccggtggcaacgatgtc 83519
>emb|AJ577362.1|HVU577362 Hordeum vulgare partial mRNA for beta3-glucuronyltransferase (pglcat6 gene), clone 4 Length = 1306 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 52 cgtcgagaagcaccgcctctccggcgtcgtccacttcgccgacg 95 ||||||||| ||||||||| |||||||||| |||||||||||| Sbjct: 319 cgtcgagaaccaccgcctcgacggcgtcgtctacttcgccgacg 362
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 43 gctcgcccacgtcgagaagcaccgcctct 71 |||||||||||||||||||||| |||||| Sbjct: 25971847 gctcgcccacgtcgagaagcactgcctct 25971819
>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1226_A12 Length = 113025 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 43 gctcgcccacgtcgagaagcaccgcctct 71 |||||||||||||||||||||| |||||| Sbjct: 9705 gctcgcccacgtcgagaagcactgcctct 9677
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 43 gctcgcccacgtcgagaagcaccgcctct 71 |||||||||||||||||||||| |||||| Sbjct: 126945 gctcgcccacgtcgagaagcactgcctct 126917
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 184 agagaagaaggttgtggttgagg 206 ||||||||||||||||||||||| Sbjct: 3435362 agagaagaaggttgtggttgagg 3435340
>ref|XM_470958.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Plus Query: 34 caacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgccga 93 ||||||||| |||| | |||||| || ||||||||| ||||||| || |||||||||| Sbjct: 615 caacgccgccctcgacatcgtcgacaaccaccgcctcgacggcgtcctctacttcgccga 674 Query: 94 cg 95 || Sbjct: 675 cg 676
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15, complete sequence Length = 144778 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Plus Query: 34 caacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgccga 93 ||||||||| |||| | |||||| || ||||||||| ||||||| || |||||||||| Sbjct: 3315 caacgccgccctcgacatcgtcgacaaccaccgcctcgacggcgtcctctacttcgccga 3374 Query: 94 cg 95 || Sbjct: 3375 cg 3376
>gb|AY935504.1| Populus tremula x Populus tremuloides secondary cell wall-related glycosyltransferase family 43 mRNA, complete cds Length = 1392 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 143 gaggcgtttgggacatggccggtggc 168 |||| ||||||||||||||||||||| Sbjct: 794 gaggtgtttgggacatggccggtggc 819
>dbj|AK070873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023071K13, full insert sequence Length = 1867 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Plus Query: 34 caacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgccga 93 ||||||||| |||| | |||||| || ||||||||| ||||||| || |||||||||| Sbjct: 826 caacgccgccctcgacatcgtcgacaaccaccgcctcgacggcgtcctctacttcgccga 885 Query: 94 cg 95 || Sbjct: 886 cg 887
>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06, complete sequence Length = 145517 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Plus Query: 34 caacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgccga 93 ||||||||| |||| | |||||| || ||||||||| ||||||| || |||||||||| Sbjct: 138782 caacgccgccctcgacatcgtcgacaaccaccgcctcgacggcgtcctctacttcgccga 138841 Query: 94 cg 95 || Sbjct: 138842 cg 138843
>ref|XM_550204.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1650 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 72 ccggcgtcgtccacttcgccgacgccgccggcgtctacgac 112 |||||||||| |||||||||| ||| || ||||||||||| Sbjct: 494 ccggcgtcgtgcacttcgccgccgcttccagcgtctacgac 534
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 caggaggtggtgctggaggac 469 ||||||||||||||||||||| Sbjct: 1260357 caggaggtggtgctggaggac 1260377
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 cgcagcgcaacgccgcgctcg 47 ||||||||||||||||||||| Sbjct: 1014918 cgcagcgcaacgccgcgctcg 1014938
>gb|AY196994.1| Streptomyces griseoruber heda cluster, complete sequence Length = 45603 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 67 cctctccggcgtcgtccacttcgccgacg 95 |||| ||||||||||| |||||||||||| Sbjct: 35592 cctcgccggcgtcgtcgacttcgccgacg 35620
>ref|XM_850357.1| PREDICTED: Canis familiaris similar to Fc fragment of IgG binding protein (LOC612624), mRNA Length = 5772 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cggtgctgctggcacgcgagcccac 337 ||||||||||||| ||||||||||| Sbjct: 1040 cggtgctgctggcgcgcgagcccac 1064
>emb|AJ969048.1| Zea mays mRNA for glycosyltransferase (pglcat2 gene) Length = 1449 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Plus Query: 35 aacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgccgac 94 ||||| ||||||| |||| ||||| | |||||| || |||| ||||| ||||||||||| Sbjct: 540 aacgcggcgctcgaccacatcgagcaccaccgcatccacggcctcgtctacttcgccgac 599 Query: 95 g 95 | Sbjct: 600 g 600
>emb|AJ969047.1| Sorghum bicolor mRNA for glycosyltransferase (pglcat2 gene) Length = 1393 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Plus Query: 35 aacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgccgac 94 ||||| ||||||| |||| ||||| | |||||| || |||| ||||| ||||||||||| Sbjct: 496 aacgcggcgctcgaccacatcgagcaccaccgcatccacggcctcgtctacttcgccgac 555 Query: 95 g 95 | Sbjct: 556 g 556
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 cggtgctgctggcacgcgagc 333 ||||||||||||||||||||| Sbjct: 2221687 cggtgctgctggcacgcgagc 2221667
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 72 ccggcgtcgtccacttcgccgacgccgccggcgtctacgac 112 |||||||||| |||||||||| ||| || ||||||||||| Sbjct: 3038791 ccggcgtcgtgcacttcgccgccgcttccagcgtctacgac 3038831
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 acgacacccacttcttcgatg 128 ||||||||||||||||||||| Sbjct: 1171976 acgacacccacttcttcgatg 1171956
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 72 ccggcgtcgtccacttcgccgacgccgccggcgtctacgac 112 |||||||||| |||||||||| ||| || ||||||||||| Sbjct: 120308 ccggcgtcgtgcacttcgccgccgcttccagcgtctacgac 120348
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 72 ccggcgtcgtccacttcgccgacgccgccggcgtctacgac 112 |||||||||| |||||||||| ||| || ||||||||||| Sbjct: 6831 ccggcgtcgtgcacttcgccgccgcttccagcgtctacgac 6871
>ref|NM_185277.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgacgccgccggcgtc 106 |||||||||||||||||||| Sbjct: 503 tcgccgacgccgccggcgtc 522
>ref|XM_464323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2028 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cgccgacgccgccggcgtct 107 |||||||||||||||||||| Sbjct: 307 cgccgacgccgccggcgtct 288
>ref|XM_464066.1| Oryza sativa (japonica cultivar-group), mRNA Length = 934 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 acgtcgagaagcaccgcctctccg 74 |||||| ||||||||||||||||| Sbjct: 370 acgtcgggaagcaccgcctctccg 393
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgacgccgccggcgtc 106 |||||||||||||||||||| Sbjct: 87037 tcgccgacgccgccggcgtc 87056
>gb|DQ232587.1| Rhodobacter sphaeroides 2.4.1 plasmid E, partial sequence Length = 37100 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 atcctgccggtgctgctggc 325 |||||||||||||||||||| Sbjct: 4858 atcctgccggtgctgctggc 4839
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 atcctgccggtgctgctggc 325 |||||||||||||||||||| Sbjct: 600799 atcctgccggtgctgctggc 600818
>ref|XM_855044.1| PREDICTED: Canis familiaris similar to supervillin isoform 1, transcript variant 4 (LOC477965), mRNA Length = 7040 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccgaggcccacgcgcagcgc 34 |||||||||||||||||||| Sbjct: 1170 ccgaggcccacgcgcagcgc 1189
>ref|XM_844807.1| PREDICTED: Canis familiaris similar to supervillin isoform 1, transcript variant 2 (LOC477965), mRNA Length = 6692 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccgaggcccacgcgcagcgc 34 |||||||||||||||||||| Sbjct: 1170 ccgaggcccacgcgcagcgc 1189
>ref|XM_854935.1| PREDICTED: Canis familiaris similar to supervillin isoform 1, transcript variant 3 (LOC477965), mRNA Length = 5789 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccgaggcccacgcgcagcgc 34 |||||||||||||||||||| Sbjct: 1170 ccgaggcccacgcgcagcgc 1189
>gb|AY365059.1| Chlamydomonas reinhardtii NADH:ubiquinone oxidoreductase 20,9 kD-like subunit mRNA, complete cds; nuclear gene for mitochondrial product Length = 1201 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 cggtgctgctggcacgcgag 332 |||||||||||||||||||| Sbjct: 666 cggtgctgctggcacgcgag 685
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ggcccacgcgcagcgcaacg 38 |||||||||||||||||||| Sbjct: 282461 ggcccacgcgcagcgcaacg 282480
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgtccacttcgccgacgccg 98 |||||||||||||||||||| Sbjct: 1714006 cgtccacttcgccgacgccg 1714025
>ref|XM_787908.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC588213 (LOC588213), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 ctgaggttgacttgaatcct 310 |||||||||||||||||||| Sbjct: 1519 ctgaggttgacttgaatcct 1500
>gb|AC175363.2| Pan troglodytes chromosome X clone CH251-7A1 map human ortholog p11.4, complete sequence Length = 221738 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 atcctgccggtgctgctggc 325 |||||||||||||||||||| Sbjct: 214104 atcctgccggtgctgctggc 214085
>ref|XM_780115.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC580034 (LOC580034), mRNA Length = 2271 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 caggaggtggtgctggagga 468 |||||||||||||||||||| Sbjct: 1459 caggaggtggtgctggagga 1440
>emb|CR378667.1| Photobacterium profundum SS9; segment 5/12 Length = 349080 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 gattcaatcaagtttgtgca 450 |||||||||||||||||||| Sbjct: 219574 gattcaatcaagtttgtgca 219555
>emb|CR382291.11| Zebrafish DNA sequence from clone CH211-245G10, complete sequence Length = 159807 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 aagaaggttgtggttgaggg 207 |||||||||||||||||||| Sbjct: 68177 aagaaggttgtggttgaggg 68196
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcgccgacgccgccggcgtc 106 |||||||||||||||||||| Sbjct: 358646 tcgccgacgccgccggcgtc 358627
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ccgccagatcgaggcgtttg 152 |||||||||||||||||||| Sbjct: 2727838 ccgccagatcgaggcgtttg 2727819
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gccgcgctcgcccacgtcga 57 |||||||||||||||||||| Sbjct: 2489368 gccgcgctcgcccacgtcga 2489349
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcgccgacgccgccggcgtc 106 |||||||||||||||||||| Sbjct: 972356 tcgccgacgccgccggcgtc 972337
>emb|AL772373.23| Zebrafish DNA sequence from clone CH211-143A22 in linkage group 14, complete sequence Length = 185265 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 aagaaggttgtggttgaggg 207 |||||||||||||||||||| Sbjct: 133314 aagaaggttgtggttgaggg 133295
>gb|AC154038.1| Mus musculus 6 BAC RP23-49L8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213878 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 gcaggaggtggtgctggagg 467 |||||||||||||||||||| Sbjct: 48651 gcaggaggtggtgctggagg 48670
>ref|XM_625286.1| PREDICTED: Apis mellifera hypothetical protein LOC552459 (LOC552459), mRNA Length = 1825 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 ggaggtggtgctggaggaca 470 |||||||||||||||||||| Sbjct: 523 ggaggtggtgctggaggaca 542
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgacgccgccggcgtc 106 |||||||||||||||||||| Sbjct: 7419902 tcgccgacgccgccggcgtc 7419921
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cgccgacgccgccggcgtct 107 |||||||||||||||||||| Sbjct: 4115547 cgccgacgccgccggcgtct 4115566 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 acgtcgagaagcaccgcctctccg 74 |||||| ||||||||||||||||| Sbjct: 2007601 acgtcgggaagcaccgcctctccg 2007624
>gb|AC133965.3| Homo sapiens BAC clone RP11-781F15 from 2, complete sequence Length = 48376 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 gcaggaggtggtgctggagg 467 |||||||||||||||||||| Sbjct: 28025 gcaggaggtggtgctggagg 28044
>gb|AC068491.4| Homo sapiens BAC clone RP11-803D5 from 2, complete sequence Length = 176551 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 gcaggaggtggtgctggagg 467 |||||||||||||||||||| Sbjct: 121346 gcaggaggtggtgctggagg 121365
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 caacgccgcgctcgcccacg 53 |||||||||||||||||||| Sbjct: 867779 caacgccgcgctcgcccacg 867798
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 123 tcgatgagatccgccagatcgaggcgtt 150 |||||||| | ||||||||||||||||| Sbjct: 8633362 tcgatgagctgcgccagatcgaggcgtt 8633335
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 atccgccagatcgaggcgtt 150 |||||||||||||||||||| Sbjct: 6679803 atccgccagatcgaggcgtt 6679784
>dbj|AP003017.1| Mesorhizobium loti MAFF303099 plasmid pMLb DNA, complete genome Length = 208315 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atccgccagatcgaggcgtt 150 |||||||||||||||||||| Sbjct: 39347 atccgccagatcgaggcgtt 39366
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cgccgacgccgccggcgtct 107 |||||||||||||||||||| Sbjct: 25561 cgccgacgccgccggcgtct 25580
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cgccgacgccgccggcgtct 107 |||||||||||||||||||| Sbjct: 162213 cgccgacgccgccggcgtct 162232
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 acgtcgagaagcaccgcctctccg 74 |||||| ||||||||||||||||| Sbjct: 57809 acgtcgggaagcaccgcctctccg 57832
>ref|XM_317596.2| Anopheles gambiae str. PEST ENSANGP00000007267 (ENSANGG00000005482), partial mRNA Length = 4299 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 accgcctctccggcgtcgtccact 86 ||||||||| |||||||||||||| Sbjct: 766 accgcctctacggcgtcgtccact 789
>gb|AF116403.1|REMB034R1 Rhizobium etli mutant MB034 RosR-transcriptionally regulated sequence Length = 361 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gccgcgctcgcccacgtcga 57 |||||||||||||||||||| Sbjct: 203 gccgcgctcgcccacgtcga 222
>gb|AY037858.1| Cercopithicine herpesvirus 15 strain LCL8664, complete genome Length = 171096 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 gcaggaggtggtgctggagg 467 |||||||||||||||||||| Sbjct: 90139 gcaggaggtggtgctggagg 90158
>dbj|AK101629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054L18, full insert sequence Length = 2538 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 acgtcgagaagcaccgcctctccg 74 |||||| ||||||||||||||||| Sbjct: 371 acgtcgggaagcaccgcctctccg 394
>gb|AF103943.1|AF103943 Streptomyces griseus factor C protein precursor, gene, complete cds Length = 975 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cgccgccggcgtctacgaca 113 |||||||||||||||||||| Sbjct: 624 cgccgccggcgtctacgaca 643
>dbj|AK060530.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-H12, full insert sequence Length = 934 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 acgtcgagaagcaccgcctctccg 74 |||||| ||||||||||||||||| Sbjct: 370 acgtcgggaagcaccgcctctccg 393
>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds; chivosazol biosynthetic gene cluster, complete sequence; and hypothetical protein gene, complete cds Length = 96547 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cttcgccgacgccgccggcg 104 |||||||||||||||||||| Sbjct: 52803 cttcgccgacgccgccggcg 52784
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgacgccgccggcgtc 106 |||||||||||||||||||| Sbjct: 7419781 tcgccgacgccgccggcgtc 7419800
>emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 98782 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgacgccgccggcgtc 106 |||||||||||||||||||| Sbjct: 9578 tcgccgacgccgccggcgtc 9597
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgacgccgccggcgtc 106 |||||||||||||||||||| Sbjct: 3144 tcgccgacgccgccggcgtc 3163 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,631,779 Number of Sequences: 3902068 Number of extensions: 3631779 Number of successful extensions: 78648 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76082 Number of HSP's gapped (non-prelim): 2563 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)