>PDXJ_BRUSU (Q8FZT6) Pyridoxal phosphate biosynthetic protein pdxJ (PNP|
           synthase)
          Length = 246

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 PDDQAGRSDQRGWDGMAAADANVPPVGRAKG 108
           PDD    +   GWD M+ AD   P V R KG
Sbjct: 99  PDDPMQATSDHGWDFMSKADFLAPIVARLKG 129

>PDXJ_BRUME (Q8YI24) Pyridoxal phosphate biosynthetic protein pdxJ (PNP|
           synthase)
          Length = 246

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 PDDQAGRSDQRGWDGMAAADANVPPVGRAKG 108
           PDD    +   GWD M+ AD   P V R KG
Sbjct: 99  PDDPMQATSDHGWDFMSKADFLAPIVARLKG 129

>PDXJ_BRUAB (Q57CC2) Pyridoxal phosphate biosynthetic protein pdxJ (PNP|
           synthase)
          Length = 246

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 PDDQAGRSDQRGWDGMAAADANVPPVGRAKG 108
           PDD    +   GWD M+ AD   P V R KG
Sbjct: 99  PDDPMQATSDHGWDFMSKADFLAPIVARLKG 129

>PDXJ_BRUA2 (Q2YQM7) Pyridoxal phosphate biosynthetic protein pdxJ (PNP|
           synthase)
          Length = 246

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 PDDQAGRSDQRGWDGMAAADANVPPVGRAKG 108
           PDD    +   GWD M+ AD   P V R KG
Sbjct: 99  PDDPMQATSDHGWDFMSKADFLAPIVARLKG 129

>LEU2_BORPE (Q7VY75) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 467

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 188 AGRSDQRGWDGMAAADANVPPVGRAKGIQ 102
           AGR   R    +A AD NVP + RA+GI+
Sbjct: 47  AGRQPWRVGANLAVADHNVPTLNRAQGIE 75

>LEU2_BORPA (Q7W931) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 467

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 188 AGRSDQRGWDGMAAADANVPPVGRAKGIQ 102
           AGR   R    +A AD NVP + RA+GI+
Sbjct: 47  AGRQPWRVGANLAVADHNVPTLNRAQGIE 75

>LEU2_BORBR (Q7WKH6) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 467

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 188 AGRSDQRGWDGMAAADANVPPVGRAKGIQ 102
           AGR   R    +A AD NVP + RA+GI+
Sbjct: 47  AGRQPWRVGANLAVADHNVPTLNRAQGIE 75


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,579,661
Number of Sequences: 219361
Number of extensions: 405054
Number of successful extensions: 955
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)