ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast58b12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468602.1| Oryza sativa (japonica cultivar-group), mRNA Length = 219 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 380 ccgctcgacccctgcggccgccaccgcctgcagctcgccgtcgacgcgctccaccgc 436 |||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 43 ccgcccgacccatgcggccgccaccgcctccagctcgccgtcgacgcgctccaccgc 99
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 380 ccgctcgacccctgcggccgccaccgcctgcagctcgccgtcgacgcgctccaccgc 436 |||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 35108 ccgcccgacccatgcggccgccaccgcctccagctcgccgtcgacgcgctccaccgc 35164
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 380 ccgctcgacccctgcggccgccaccgcctgcagctcgccgtcgacgcgctccaccgc 436 |||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 16549224 ccgcccgacccatgcggccgccaccgcctccagctcgccgtcgacgcgctccaccgc 16549168
>gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genomic sequence, complete sequence Length = 133843 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 380 ccgctcgacccctgcggccgccaccgcctgcagctcgccgtcgacgcgctccaccgc 436 |||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104819 ccgcccgacccatgcggccgccaccgcctccagctcgccgtcgacgcgctccaccgc 104875
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 380 ccgctcgacccctgcggccgccaccgcctgcagctcgccgtcgacgcgctccaccgc 436 |||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 16542857 ccgcccgacccatgcggccgccaccgcctccagctcgccgtcgacgcgctccaccgc 16542801
>gb|DQ355996.1| Oryza sativa (indica cultivar-group) grain length and weight protein (GS3) gene, complete cds Length = 6766 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 380 ccgctcgacccctgcggccgccaccgcctgcagctcgccgtcgacgcgctccaccgc 436 |||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 606 ccgcccgacccatgcggccgccaccgcctccagctcgccgtcgacgcgctccaccgc 662
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 172 tgatctgatctgccagcttgatca 195 |||||||||||||||||||||||| Sbjct: 89765 tgatctgatctgccagcttgatca 89788 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 172 tgatctgatctgccagcttgatca 195 |||||||||||||||||||||||| Sbjct: 75204 tgatctgatctgccagcttgatca 75227
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 172 tgatctgatctgccagcttgatca 195 |||||||||||||||||||||||| Sbjct: 20449617 tgatctgatctgccagcttgatca 20449640 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 172 tgatctgatctgccagcttgatca 195 |||||||||||||||||||||||| Sbjct: 20435056 tgatctgatctgccagcttgatca 20435079
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 172 tgatctgatctgccagcttgatca 195 |||||||||||||||||||||||| Sbjct: 20460889 tgatctgatctgccagcttgatca 20460912 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 172 tgatctgatctgccagcttgatca 195 |||||||||||||||||||||||| Sbjct: 20446328 tgatctgatctgccagcttgatca 20446351
>gb|AC121845.3| Mus musculus BAC clone RP24-82B23 from 5, complete sequence Length = 217530 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 251 tcccggcctccgctcctctcctggccta 278 |||||||||| ||||||||||||||||| Sbjct: 153890 tcccggcctcagctcctctcctggccta 153917
>emb|AL031123.14|HS80N2 Human DNA sequence from clone RP1-80N2 on chromosome 6p24.1-25.3 Contains the gene for MD-1,RP105-associated, part of a putative novel gene and three putative CpG islands, complete sequence Length = 193731 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 158 catcccatcccctctgatctga 179 |||||||||||||||||||||| Sbjct: 105686 catcccatcccctctgatctga 105665
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 408 tgcagctcgccgtcgacgcgct 429 |||||||||||||||||||||| Sbjct: 4938458 tgcagctcgccgtcgacgcgct 4938479
>gb|AY603543.1| Mycobacterium avium subsp. paratuberculosis strain RIVM 1997-1803 tandem repeat Length = 248 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 ccgcctgcagctcgccgtcga 423 ||||||||||||||||||||| Sbjct: 209 ccgcctgcagctcgccgtcga 229
>ref|XM_464830.1| Oryza sativa (japonica cultivar-group), mRNA Length = 954 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 ctccgccgccgcccggcctct 103 ||||||||||||||||||||| Sbjct: 775 ctccgccgccgcccggcctct 755
>gb|AC073208.4| Homo sapiens BAC clone RP11-418B19 from 7, complete sequence Length = 71606 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 ttcctgtctcctcctccttcc 63 ||||||||||||||||||||| Sbjct: 33328 ttcctgtctcctcctccttcc 33308
>gb|AC146048.3| Pan troglodytes BAC clone RP43-44J1 from 7, complete sequence Length = 135620 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 ttcctgtctcctcctccttcc 63 ||||||||||||||||||||| Sbjct: 59983 ttcctgtctcctcctccttcc 59963
>gb|AC087649.6| Homo sapiens chromosome 17, clone RP11-46I22, complete sequence Length = 25057 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctct 172 ||||||||||||||||||||| Sbjct: 5300 ccatcccatcccatcccctct 5320
>gb|AC159710.9| Mus musculus 10 BAC RP24-325N16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 204302 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctct 172 ||||||||||||||||||||| Sbjct: 153788 ccatcccatcccatcccctct 153808
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 ctccgccgccgcccggcctct 103 ||||||||||||||||||||| Sbjct: 8428194 ctccgccgccgcccggcctct 8428174 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 ctagctagccagccggcgcg 295 |||||||||||||||||||| Sbjct: 8868477 ctagctagccagccggcgcg 8868496 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 gctcgccgtcgacgcgctcc 431 |||||||||||||||||||| Sbjct: 1903143 gctcgccgtcgacgcgctcc 1903162
>gb|AC012365.6| Homo sapiens BAC clone RP11-459C22 from 2, complete sequence Length = 187848 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctct 172 ||||||||||||||||||||| Sbjct: 96090 ccatcccatcccatcccctct 96110 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctct 172 ||||||||||||||||||||| Sbjct: 95895 ccatcccatcccatcccctct 95915
>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011N12 Length = 158586 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 ctccgccgccgcccggcctct 103 ||||||||||||||||||||| Sbjct: 81044 ctccgccgccgcccggcctct 81024
>emb|AL163246.2|HS21C046 Homo sapiens chromosome 21 segment HS21C046 Length = 340000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 gccatcccatcccatcccctc 171 ||||||||||||||||||||| Sbjct: 117198 gccatcccatcccatcccctc 117178
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 ccgcctgcagctcgccgtcga 423 ||||||||||||||||||||| Sbjct: 3689029 ccgcctgcagctcgccgtcga 3689049
>gb|AC147476.3| Mus musculus BAC clone RP23-132H10 from 3, complete sequence Length = 197405 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctctgatc 176 ||||||||||||||||| ||||||| Sbjct: 76514 ccatcccatcccatcccgtctgatc 76538
>gb|AC161053.5| Mus musculus BAC clone RP23-381G13 from chromosome 3, complete sequence Length = 205395 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctctgatc 176 ||||||||||||||||| ||||||| Sbjct: 197712 ccatcccatcccatcccgtctgatc 197736
>emb|AJ006995.1|HSF18108 Homo sapiens chromosome 21 PAC LLNLP704F18108Q13, complete sequence Length = 152383 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 gccatcccatcccatcccctc 171 ||||||||||||||||||||| Sbjct: 114238 gccatcccatcccatcccctc 114218
>gb|AC161045.2| Mus musculus BAC clone RP24-326E14 from chromosome 13, complete sequence Length = 150469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 30220 ccatcccatcccatcccctc 30201
>ref|XM_482480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 318 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 gccacctccgcctctctccgccgc 91 |||||||||||||| ||||||||| Sbjct: 76 gccacctccgcctcgctccgccgc 53
>gb|DQ213183.1| Taeniopygia guttata clone 0058P0051B05 homeobox protein DBX1-like mRNA, complete sequence Length = 1154 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccgcctctctccgccgccgc 94 |||||||||||||||||||| Sbjct: 373 ccgcctctctccgccgccgc 354
>ref|XM_506712.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0081C13.10 mRNA Length = 1515 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 gctcgccgtcgacgcgctcc 431 |||||||||||||||||||| Sbjct: 141 gctcgccgtcgacgcgctcc 160
>ref|XM_464047.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1396 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 gctcgccgtcgacgcgctcc 431 |||||||||||||||||||| Sbjct: 154 gctcgccgtcgacgcgctcc 173
>ref|NM_192083.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1455 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 73 ccatcccatcccatcccctc 54
>ref|XM_477592.1| Oryza sativa (japonica cultivar-group), mRNA Length = 270 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cccctgcggccgccaccgcc 407 |||||||||||||||||||| Sbjct: 114 cccctgcggccgccaccgcc 95
>gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, complete sequence Length = 147518 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 ctctccgccgccgcccggcctctg 104 ||||||||||||||||| |||||| Sbjct: 144457 ctctccgccgccgcccgccctctg 144480
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cgcctctctccgccgccgcc 95 |||||||||||||||||||| Sbjct: 300726 cgcctctctccgccgccgcc 300707
>gb|AC150871.4| Bos taurus BAC CH240-316E7 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 167244 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 atcccatcccctctgatctg 178 |||||||||||||||||||| Sbjct: 108640 atcccatcccctctgatctg 108659
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 Score = 40.1 bits (20), Expect = 5.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 68 gccacctccgcctctctccgccgccgcc 95 |||||||||||||| ||||||||||||| Sbjct: 117844 gccacctccgcctc-ctccgccgccgcc 117818
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 40.1 bits (20), Expect = 5.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 68 gccacctccgcctctctccgccgccgcc 95 |||||||||||||| ||||||||||||| Sbjct: 15207 gccacctccgcctc-ctccgccgccgcc 15181
>ref|XM_368775.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00469.4) partial mRNA Length = 2868 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 tgtctcctcctccttccggcggcc 70 |||||||||||||||||| ||||| Sbjct: 2285 tgtctcctcctccttccgccggcc 2308
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 cgccgtcgacgcgctccacc 434 |||||||||||||||||||| Sbjct: 1898371 cgccgtcgacgcgctccacc 1898352
>gb|AC160469.5| Mus musculus chromosome 5, clone RP23-318I19, complete sequence Length = 221860 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 147198 ccatcccatcccatcccctc 147217
>gb|AF419671.1| Uncultured bacterium a2b010 16S ribosomal RNA gene, partial sequence Length = 1551 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 accccagtcgccagccctac 35 |||||||||||||||||||| Sbjct: 1530 accccagtcgccagccctac 1511
>gb|AC139939.6| Mus musculus chromosome 1, clone RP23-458O23, complete sequence Length = 175033 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 79749 ccatcccatcccatcccctc 79768
>gb|BC059215.1| Mus musculus transcriptional regulating factor 1, mRNA (cDNA clone MGC:66566 IMAGE:6412734), complete cds Length = 4555 Score = 40.1 bits (20), Expect = 5.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 68 gccacctccgcctctctccgccgccgcc 95 |||||||||||||| ||||||||||||| Sbjct: 2337 gccacctccgcctc-ctccgccgccgcc 2363
>ref|XM_567784.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK00960) partial mRNA Length = 2751 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cgcctctctccgccgccgcc 95 |||||||||||||||||||| Sbjct: 1795 cgcctctctccgccgccgcc 1814
>gb|AC009159.12| Homo sapiens chromosome 16 clone RP11-70D24, complete sequence Length = 165921 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 gacttcctgtctcctcctccttcc 63 |||||||||| ||||||||||||| Sbjct: 157320 gacttcctgtttcctcctccttcc 157343
>gb|AC121839.3| Mus musculus BAC clone RP24-76E2 from chromosome 13, complete sequence Length = 182835 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 73705 ccatcccatcccatcccctc 73686
>gb|AC087728.3| Papio anubis clone RP41-340H23, complete sequence Length = 198888 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 71002 ccatcccatcccatcccctc 71021
>gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, complete sequence Length = 190816 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 catcccatcccatcccctct 172 |||||||||||||||||||| Sbjct: 141301 catcccatcccatcccctct 141320
>gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, complete sequence Length = 206979 Score = 40.1 bits (20), Expect = 5.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 68 gccacctccgcctctctccgccgccgcc 95 |||||||||||||| ||||||||||||| Sbjct: 102757 gccacctccgcctc-ctccgccgccgcc 102783
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 ccaccgcctgcagctcgccg 419 |||||||||||||||||||| Sbjct: 4515291 ccaccgcctgcagctcgccg 4515272
>gb|AC119420.12| Mus musculus strain 129S6/SvEvTac clone rp22-121i21 map 11, complete sequence Length = 168186 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 82798 ccatcccatcccatcccctc 82817
>emb|BX070866.1|CNS09QUE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC8AG03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 303 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 262 gcgagcgagcgagctctccg 243
>emb|BX070865.1|CNS09QUD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC8AG03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 558 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 519 gcgagcgagcgagctctccg 538
>emb|BX070781.1|CNS09QS1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC8AB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 933 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 471 gcgagcgagcgagctctccg 452
>emb|BX070780.1|CNS09QS0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC8AB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 985 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 495 gcgagcgagcgagctctccg 514
>emb|BX067906.1|CNS09OK6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC51DC01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 773 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 437 gcgagcgagcgagctctccg 418
>emb|BX067905.1|CNS09OK5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC51DC01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 982 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 513 gcgagcgagcgagctctccg 532
>emb|BX064763.1|CNS09M4V Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC48BC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 448 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 358 gcgagcgagcgagctctccg 339
>emb|BX064762.1|CNS09M4U Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC48BC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 593 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 519 gcgagcgagcgagctctccg 538
>emb|BX064600.1|CNS09M0C Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC46DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 505 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 460 gcgagcgagcgagctctccg 441
>emb|BX064599.1|CNS09M0B Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC46DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 954 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 541 gcgagcgagcgagctctccg 560
>emb|BX060782.1|CNS09J2A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC41BC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 760 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 458 gcgagcgagcgagctctccg 439
>emb|BX060781.1|CNS09J29 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC41BC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 941 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 536 gcgagcgagcgagctctccg 555
>emb|BX055282.1|CNS09ETI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC33DD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 787 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 455 gcgagcgagcgagctctccg 436
>emb|BX055281.1|CNS09ETH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC33DD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 869 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 479 gcgagcgagcgagctctccg 498
>emb|BX052931.1|CNS09D07 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC30BC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 986 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 447 gcgagcgagcgagctctccg 428
>emb|BX052930.1|CNS09D06 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC30BC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1018 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 530 gcgagcgagcgagctctccg 549
>emb|BX050591.1|CNS09B77 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC27AF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 751 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 454 gcgagcgagcgagctctccg 435
>emb|BX050590.1|CNS09B76 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC27AF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 939 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 524 gcgagcgagcgagctctccg 543
>emb|BX041628.1|CNS094A8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC13AF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 716 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 386 gcgagcgagcgagctctccg 367
>emb|BX041627.1|CNS094A7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC13AF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 555 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 526 gcgagcgagcgagctctccg 545
>emb|BX020503.1|CNS08NZF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA30AG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 162 gcgagcgagcgagctctccg 143
>emb|BX014485.1|CNS08JC9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA21DB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 878 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 398 gcgagcgagcgagctctccg 379
>emb|BX014484.1|CNS08JC8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA21DB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 988 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 537 gcgagcgagcgagctctccg 556
>emb|BX013858.1|CNS08IUU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA20DC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 974 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 443 gcgagcgagcgagctctccg 424
>emb|BX013857.1|CNS08IUT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA20DC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1008 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 526 gcgagcgagcgagctctccg 545
>emb|BX012067.1|CNS08HH3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA19AH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 942 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 457 gcgagcgagcgagctctccg 438
>emb|BX012066.1|CNS08HH2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA19AH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 947 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 536 gcgagcgagcgagctctccg 555
>emb|BX009407.1|CNS08FF7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15BA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 721 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 452 gcgagcgagcgagctctccg 433
>emb|BX009406.1|CNS08FF6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15BA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 849 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 533 gcgagcgagcgagctctccg 552
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 cgccgtcgacgcgctccacc 434 |||||||||||||||||||| Sbjct: 57095 cgccgtcgacgcgctccacc 57076
>emb|BX321863.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 8/10 Length = 286850 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 cgcgagcgagcgagctctcc 311 |||||||||||||||||||| Sbjct: 275121 cgcgagcgagcgagctctcc 275102
>gb|AC152392.6| Mus musculus chromosome 1, clone RP23-300P10, complete sequence Length = 225267 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 216789 ccatcccatcccatcccctc 216808
>gb|AC069306.6| Homo sapiens BAC clone RP11-654F3 from 4, complete sequence Length = 49353 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gcctctgaatccccttggcc 117 |||||||||||||||||||| Sbjct: 25690 gcctctgaatccccttggcc 25671
>gb|AC010785.8| Homo sapiens, clone RP11-6O24, complete sequence Length = 146665 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 cggccatcccatcccatccc 168 |||||||||||||||||||| Sbjct: 31840 cggccatcccatcccatccc 31821
>dbj|AK046822.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830015H24 product:ZINC FINGER TRANSCRIPTION FACTOR TREP-132 homolog [Homo sapiens], full insert sequence Length = 3953 Score = 40.1 bits (20), Expect = 5.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 68 gccacctccgcctctctccgccgccgcc 95 |||||||||||||| ||||||||||||| Sbjct: 1815 gccacctccgcctc-ctccgccgccgcc 1841
>dbj|AK035176.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430096I18 product:similar to ZINC FINGER TRANSCRIPTION FACTOR TREP-132 [Homo sapiens], full insert sequence Length = 3255 Score = 40.1 bits (20), Expect = 5.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 68 gccacctccgcctctctccgccgccgcc 95 |||||||||||||| ||||||||||||| Sbjct: 1944 gccacctccgcctc-ctccgccgccgcc 1970
>dbj|AK079074.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330155L08 product:thiopurine methyltransferase, full insert sequence Length = 1885 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 catcccatcccatcccctct 172 |||||||||||||||||||| Sbjct: 611 catcccatcccatcccctct 630
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 cgccgtcgacgcgctccacc 434 |||||||||||||||||||| Sbjct: 58130 cgccgtcgacgcgctccacc 58111
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 ctgcagctcgccgtcgacgcgctc 430 |||||||||||| ||||||||||| Sbjct: 834127 ctgcagctcgccttcgacgcgctc 834150
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 tgtctcctcctccttccggcggcc 70 ||||||||||||| |||||||||| Sbjct: 21376498 tgtctcctcctccgtccggcggcc 21376521 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 899091 ccatcccatcccatcccctc 899110
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 gccacctccgcctctctccgccgc 91 |||||||||||||| ||||||||| Sbjct: 20461420 gccacctccgcctcgctccgccgc 20461443
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cccctgcggccgccaccgcc 407 |||||||||||||||||||| Sbjct: 11711227 cccctgcggccgccaccgcc 11711246
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 cctccgcctctctccgccgccgcc 95 |||||||||||| ||||||||||| Sbjct: 17337664 cctccgcctctccccgccgccgcc 17337687
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 68 gccacctccgcctctctccgccgccgcc 95 |||||||||||||| ||||||||||||| Sbjct: 19414495 gccacctccgcctc-ctccgccgccgcc 19414469
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 28233330 ccatcccatcccatcccctc 28233311
>gb|AY081774.1| Mus musculus transcriptional regulating protein 132 mRNA, complete cds Length = 4272 Score = 40.1 bits (20), Expect = 5.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 68 gccacctccgcctctctccgccgccgcc 95 |||||||||||||| ||||||||||||| Sbjct: 2084 gccacctccgcctc-ctccgccgccgcc 2110
>gb|AC129569.17| Mus musculus chromosome 5, clone RP23-121M13, complete sequence Length = 199799 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ctctccgccgccgcccggcctctg 104 ||||||||||||||||| |||||| Sbjct: 195348 ctctccgccgccgcccgccctctg 195325
>gb|AC007849.24| Homo sapiens 3 BAC RP11-3K16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 199835 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 102497 ccatcccatcccatcccctc 102478
>gb|AC006431.9| Homo sapiens 12 BAC RP11-451H11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 126552 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 44807 ccatcccatcccatcccctc 44826
>gb|AC034099.16| Mus Musculus Strain C57BL6/J Chromosome 7 BAC, RP23-145I16, complete sequence Length = 229553 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 151691 ccatcccatcccatcccctc 151672
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0478H03 Length = 167560 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 67837 ccatcccatcccatcccctc 67818
>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445E10 Length = 145912 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 117324 ccatcccatcccatcccctc 117305
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 ctagctagccagccggcgcg 295 |||||||||||||||||||| Sbjct: 73495 ctagctagccagccggcgcg 73514
>dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H06 Length = 142832 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 cctccgcctctctccgccgccgcc 95 |||||||||||| ||||||||||| Sbjct: 74257 cctccgcctctccccgccgccgcc 74280
>dbj|AP006344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0680C01 Length = 145580 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cccctgcggccgccaccgcc 407 |||||||||||||||||||| Sbjct: 69386 cccctgcggccgccaccgcc 69405
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 gctcgccgtcgacgcgctcc 431 |||||||||||||||||||| Sbjct: 42704 gctcgccgtcgacgcgctcc 42723
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 gccacctccgcctctctccgccgc 91 |||||||||||||| ||||||||| Sbjct: 92050 gccacctccgcctcgctccgccgc 92073
>dbj|AK112028.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G01, full insert sequence Length = 1396 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 gctcgccgtcgacgcgctcc 431 |||||||||||||||||||| Sbjct: 154 gctcgccgtcgacgcgctcc 173
>dbj|AK111732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039H16, full insert sequence Length = 1516 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 gctcgccgtcgacgcgctcc 431 |||||||||||||||||||| Sbjct: 142 gctcgccgtcgacgcgctcc 161
>ref|XM_558342.1| Anopheles gambiae str. PEST ENSANGP00000026319 (ENSANGG00000000822), partial mRNA Length = 1010 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 535 gcgagcgagcgagctctccg 554
>ref|XM_314228.2| Anopheles gambiae str. PEST ENSANGP00000000937 (ENSANGG00000000821), partial mRNA Length = 1001 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcgagcgagcgagctctccg 312 |||||||||||||||||||| Sbjct: 535 gcgagcgagcgagctctccg 554
>dbj|AK103494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130P11, full insert sequence Length = 1159 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ctagctagccagccggcgcg 295 |||||||||||||||||||| Sbjct: 972 ctagctagccagccggcgcg 953
>emb|CT571265.12| Mouse DNA sequence from clone RP23-181D9 on chromosome 14, complete sequence Length = 206513 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 cttcctgtctcctcctcctt 61 |||||||||||||||||||| Sbjct: 21541 cttcctgtctcctcctcctt 21560
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 347 aggccggcaatggcggcgcccaggccca 374 |||||| ||||||||||| ||||||||| Sbjct: 4036070 aggccgacaatggcggcggccaggccca 4036043
>gb|AC096628.14| Mus musculus strain C57BL/6J chromosome 13 clone rp23-81n4, complete sequence Length = 194818 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 catcccatcccatcccctct 172 |||||||||||||||||||| Sbjct: 98517 catcccatcccatcccctct 98498
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 aatggcggcgcccaggccca 374 |||||||||||||||||||| Sbjct: 2483713 aatggcggcgcccaggccca 2483694
>gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, complete sequence Length = 231380 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 166884 ccatcccatcccatcccctc 166865
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 tgtctcctcctccttccggcggcc 70 ||||||||||||| |||||||||| Sbjct: 21302717 tgtctcctcctccgtccggcggcc 21302740 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 899091 ccatcccatcccatcccctc 899110
>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134217 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 36676 ccatcccatcccatcccctc 36695
>gb|AC144858.3| Mus musculus BAC clone RP24-144F3 from 8, complete sequence Length = 185158 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctctgat 175 ||||||||||||||||| |||||| Sbjct: 105189 ccatcccatcccatcccatctgat 105166
>emb|CT010486.13| Mouse DNA sequence from clone RP23-129J22 on chromosome 13, complete sequence Length = 199574 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 30837 ccatcccatcccatcccctc 30818
>ref|NM_172622.1| Mus musculus transcriptional regulating factor 1 (Trerf1), mRNA Length = 3953 Score = 40.1 bits (20), Expect = 5.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 68 gccacctccgcctctctccgccgccgcc 95 |||||||||||||| ||||||||||||| Sbjct: 1815 gccacctccgcctc-ctccgccgccgcc 1841
>gb|BC108416.1| Mus musculus transcriptional regulating factor 1, mRNA (cDNA clone MGC:118525 IMAGE:5697521), complete cds Length = 4018 Score = 40.1 bits (20), Expect = 5.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 68 gccacctccgcctctctccgccgccgcc 95 |||||||||||||| ||||||||||||| Sbjct: 1797 gccacctccgcctc-ctccgccgccgcc 1823
>gb|AC110817.6| Mus musculus BAC clone RP23-155B20 from 13, complete sequence Length = 200362 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 171961 ccatcccatcccatcccctc 171942
>emb|AL731864.25| Mouse DNA sequence from clone RP23-342F20 on chromosome 7, complete sequence Length = 148047 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 79609 ccatcccatcccatcccctc 79628
>emb|AL670951.6| Mouse DNA sequence from clone RP23-6N18 on chromosome 2, complete sequence Length = 207571 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tctgatctgatctgccagct 189 |||||||||||||||||||| Sbjct: 141240 tctgatctgatctgccagct 141259
>emb|AL672241.6| Mouse DNA sequence from clone RP23-147D3 on chromosome 2, complete sequence Length = 197925 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ccatcccatcccatcccctc 171 |||||||||||||||||||| Sbjct: 167616 ccatcccatcccatcccctc 167597
>emb|AL672062.4| Mouse DNA sequence from clone RP23-34D17 on chromosome X, complete sequence Length = 199306 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 catcccatcccatcccctct 172 |||||||||||||||||||| Sbjct: 66977 catcccatcccatcccctct 66958
>dbj|AB055156.1| Oryza sativa mRNA for Sec13p, complete cds Length = 1466 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 gctcgccgtcgacgcgctcc 431 |||||||||||||||||||| Sbjct: 92 gctcgccgtcgacgcgctcc 111 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,404,983 Number of Sequences: 3902068 Number of extensions: 4404983 Number of successful extensions: 113037 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 110273 Number of HSP's gapped (non-prelim): 2824 length of query: 439 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 417 effective length of database: 17,147,199,772 effective search space: 7150382304924 effective search space used: 7150382304924 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
