ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast58b06 |
|---|---|
| Clone Library Name | barley_pub |
>XYLA_HORVU (Q40082) Xylose isomerase (EC 5.3.1.5)| Length = 479 Score = 187 bits (474), Expect = 1e-47 Identities = 86/107 (80%), Positives = 86/107 (80%) Frame = +2 Query: 122 MKGGEXXXXXXXXXXXXXXXXXXQETCPADIGAKCGDAASDDWEGEFFPGIAKINYEGPT 301 MKGGE QETCPADIGAKC DAASDDWEGEFFPGI KINYEGPT Sbjct: 1 MKGGELLVLLLASSLCLSAAVAAQETCPADIGAKCTDAASDDWEGEFFPGIDKINYEGPT 60 Query: 302 SKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAPT 442 SKKPLSYKWYNAEEVILGKKMKDW RFSVAFWHTFRGTGGDPFGAPT Sbjct: 61 SKKPLSYKWYNAEEVILGKKMKDWFRFSVAFWHTFRGTGGDPFGAPT 107
>XYLA_ARATH (Q9FKK7) Xylose isomerase (EC 5.3.1.5)| Length = 472 Score = 149 bits (375), Expect = 4e-36 Identities = 65/82 (79%), Positives = 71/82 (86%) Frame = +2 Query: 197 TCPADIGAKCGDAASDDWEGEFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWL 376 TCPAD+G KC D SDDW+G+FFP I KI YEGP+SK PL+Y+WYNAEE ILGKKMKDW Sbjct: 26 TCPADLGGKCSD--SDDWQGDFFPEIPKIKYEGPSSKNPLAYRWYNAEEEILGKKMKDWF 83 Query: 377 RFSVAFWHTFRGTGGDPFGAPT 442 RFSVAFWHTFRGTGGDPFGA T Sbjct: 84 RFSVAFWHTFRGTGGDPFGAAT 105
>XYLA_RHOBA (Q7UVG2) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 89.7 bits (221), Expect = 3e-18 Identities = 37/60 (61%), Positives = 45/60 (75%) Frame = +2 Query: 263 FPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAPT 442 FP + I YEGP S PL+++WYN +EVI GK MKD +RFS+ +WHTFRGTG DPFG T Sbjct: 4 FPDVPVIQYEGPQSDNPLAFRWYNPDEVIEGKTMKDHMRFSIVYWHTFRGTGADPFGPGT 63
>XYLA_BACTN (Q8A9M2) Xylose isomerase (EC 5.3.1.5)| Length = 438 Score = 89.4 bits (220), Expect = 4e-18 Identities = 38/62 (61%), Positives = 49/62 (79%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 EFFPGI KI +EG SK P+++++Y+AE+VI GKKMKDWLRF++A+WHT GGD FG Sbjct: 5 EFFPGIEKIKFEGKDSKNPMAFRYYDAEKVINGKKMKDWLRFAMAWWHTLCAEGGDQFGG 64 Query: 437 PT 442 T Sbjct: 65 GT 66
>XYLA_RHIME (Q92LW9) Xylose isomerase (EC 5.3.1.5)| Length = 436 Score = 85.5 bits (210), Expect = 5e-17 Identities = 37/61 (60%), Positives = 47/61 (77%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 439 FF IAKI YEGP S PL+++ YN ++V+LGK+M+D LRF+VA+WHTF GGDPFG Sbjct: 5 FFGDIAKIKYEGPESTNPLAFRHYNPDDVVLGKRMEDHLRFAVAYWHTFVWPGGDPFGGQ 64 Query: 440 T 442 T Sbjct: 65 T 65
>XYLA_THEYO (Q9KGU2) Xylose isomerase (EC 5.3.1.5)| Length = 438 Score = 85.5 bits (210), Expect = 5e-17 Identities = 35/62 (56%), Positives = 47/62 (75%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 E+F + K+ YEGP S P ++K+YN +E+I GK +K+ LRF+VA+WHTF GTG DPFGA Sbjct: 2 EYFKNVPKVQYEGPKSNNPYAFKFYNPDEIIDGKPLKEHLRFAVAYWHTFTGTGTDPFGA 61 Query: 437 PT 442 T Sbjct: 62 ST 63
>XYLA_BRUSU (Q8G204) Xylose isomerase (EC 5.3.1.5)| Length = 435 Score = 84.7 bits (208), Expect = 9e-17 Identities = 35/61 (57%), Positives = 47/61 (77%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 439 FF I K+ YEGP S PL+++ YNA+E++LGK+M+D LRF+VA+WH+F GGDPFG Sbjct: 5 FFGDIQKVRYEGPESDNPLAFRHYNADEIVLGKRMEDHLRFAVAYWHSFAWEGGDPFGGR 64 Query: 440 T 442 T Sbjct: 65 T 65
>XYLA_BRUME (Q8YFX5) Xylose isomerase (EC 5.3.1.5)| Length = 435 Score = 84.7 bits (208), Expect = 9e-17 Identities = 35/61 (57%), Positives = 47/61 (77%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 439 FF I K+ YEGP S PL+++ YNA+E++LGK+M+D LRF+VA+WH+F GGDPFG Sbjct: 5 FFGDIQKVRYEGPESDNPLAFRHYNADEIVLGKRMEDHLRFAVAYWHSFAWEGGDPFGGR 64 Query: 440 T 442 T Sbjct: 65 T 65
>XYLA_THEET (P22842) Xylose isomerase (EC 5.3.1.5)| Length = 438 Score = 84.3 bits (207), Expect = 1e-16 Identities = 35/62 (56%), Positives = 46/62 (74%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 E+F + +I YEGP S P ++K+YN +E+I GK +K+ LRFSVA+WHTF G DPFGA Sbjct: 2 EYFKNVPQIKYEGPKSNNPYAFKFYNPDEIIDGKPLKEHLRFSVAYWHTFTANGTDPFGA 61 Query: 437 PT 442 PT Sbjct: 62 PT 63
>XYLA_AGRT5 (Q8U7G6) Xylose isomerase (EC 5.3.1.5)| Length = 436 Score = 84.0 bits (206), Expect = 2e-16 Identities = 36/61 (59%), Positives = 46/61 (75%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 439 FF IAKI YEGP S PL+++ YN +E++ GK+M+D LRF+VA+WHTF GGDPFG Sbjct: 5 FFGDIAKIKYEGPDSTNPLAFRHYNPDEIVGGKRMEDHLRFAVAYWHTFTWPGGDPFGGQ 64 Query: 440 T 442 T Sbjct: 65 T 65
>XYLA_FERGO (Q6T6K9) Xylose isomerase (EC 5.3.1.5)| Length = 433 Score = 84.0 bits (206), Expect = 2e-16 Identities = 35/57 (61%), Positives = 44/57 (77%) Frame = +2 Query: 272 IAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAPT 442 + K+ YEGP+SK L+YK+YN EE I GKKM+DW RF+VA+WHTF G DPFG+ T Sbjct: 5 VEKVVYEGPSSKNLLAYKFYNPEEEIAGKKMRDWFRFAVAYWHTFNSRGEDPFGSAT 61
>XYLA_THENE (P45687) Xylose isomerase (EC 5.3.1.5)| Length = 444 Score = 83.6 bits (205), Expect = 2e-16 Identities = 37/62 (59%), Positives = 46/62 (74%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 EFFP I K+ +EG S PL++K+Y+ EE+I GK +KD L+FSVAFWHTF G DPFG Sbjct: 3 EFFPEIPKVQFEGKESTNPLAFKFYDPEEIIDGKPLKDHLKFSVAFWHTFVNEGRDPFGD 62 Query: 437 PT 442 PT Sbjct: 63 PT 64
>XYLA_RHILO (Q98CR8) Xylose isomerase (EC 5.3.1.5)| Length = 441 Score = 83.6 bits (205), Expect = 2e-16 Identities = 35/61 (57%), Positives = 46/61 (75%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 439 FF I KI YEGP S PL+Y++YN +EV+ GK+++D LRF+VA+WH+F GGDPFG Sbjct: 5 FFGDIQKIKYEGPDSTNPLAYRFYNPDEVVAGKRLEDHLRFAVAYWHSFAWPGGDPFGGQ 64 Query: 440 T 442 T Sbjct: 65 T 65
>XYLA_THEMA (Q9X1Z5) Xylose isomerase (EC 5.3.1.5)| Length = 444 Score = 81.3 bits (199), Expect = 1e-15 Identities = 37/62 (59%), Positives = 45/62 (72%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 EFFP I KI +EG S PL++++Y+ EVI GK +KD L+FSVAFWHTF G DPFG Sbjct: 3 EFFPEIPKIQFEGKESTNPLAFRFYDPNEVIDGKPLKDHLKFSVAFWHTFVNEGRDPFGD 62 Query: 437 PT 442 PT Sbjct: 63 PT 64
>XYLA_BACHD (Q9K993) Xylose isomerase (EC 5.3.1.5)| Length = 440 Score = 81.3 bits (199), Expect = 1e-15 Identities = 33/61 (54%), Positives = 43/61 (70%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 439 FF + K+ YEGP S P ++K+YN EE++ GK M + LRFS+A+WHTF G G DPFG Sbjct: 3 FFNDVEKVQYEGPRSTNPYAFKYYNPEEIVAGKTMAEHLRFSIAYWHTFVGDGSDPFGVG 62 Query: 440 T 442 T Sbjct: 63 T 63
>XYLA_BACSW (P54272) Xylose isomerase (EC 5.3.1.5)| Length = 441 Score = 80.1 bits (196), Expect = 2e-15 Identities = 35/59 (59%), Positives = 44/59 (74%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 +F I+ I YEGP SK PL++K+YN EE + K M++ LRFSVA+WHTF G G DPFGA Sbjct: 3 YFDNISTIAYEGPASKNPLAFKFYNPEEKVGDKTMEEHLRFSVAYWHTFTGDGSDPFGA 61
>XYLA_BACST (P54273) Xylose isomerase (EC 5.3.1.5)| Length = 441 Score = 80.1 bits (196), Expect = 2e-15 Identities = 35/59 (59%), Positives = 44/59 (74%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 +F I+ I YEGP SK PL++K+YN EE + K M++ LRFSVA+WHTF G G DPFGA Sbjct: 3 YFDNISTIAYEGPASKNPLAFKFYNPEEKVGDKTMEEHLRFSVAYWHTFTGDGSDPFGA 61
>XYLA_THETU (P19148) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 78.6 bits (192), Expect = 7e-15 Identities = 34/62 (54%), Positives = 44/62 (70%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 ++F ++KI YEGP S P S+K+YN EEVI GK M++ LRFS+A+WHTF G D FG Sbjct: 3 KYFENVSKIKYEGPKSNNPYSFKFYNPEEVIDGKTMEEHLRFSIAYWHTFTADGTDQFGK 62 Query: 437 PT 442 T Sbjct: 63 AT 64
>XYLA_THESA (P30435) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 78.6 bits (192), Expect = 7e-15 Identities = 34/62 (54%), Positives = 44/62 (70%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 ++F ++KI YEGP S P S+K+YN EEVI GK M++ LRFS+A+WHTF G D FG Sbjct: 3 KYFENVSKIKYEGPKSNNPYSFKFYNPEEVIDGKTMEEHLRFSIAYWHTFTADGTDQFGK 62 Query: 437 PT 442 T Sbjct: 63 AT 64
>XYLA_BACME (O08325) Xylose isomerase (EC 5.3.1.5)| Length = 445 Score = 78.6 bits (192), Expect = 7e-15 Identities = 36/60 (60%), Positives = 42/60 (70%) Frame = +2 Query: 263 FPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAPT 442 F K+ YEG SK PL++K+YN EEV+ GK MKD LRFSVA+WH F G DPFGA T Sbjct: 12 FESANKVLYEGKDSKNPLAFKYYNPEEVVGGKTMKDQLRFSVAYWHQFTADGTDPFGAAT 71
>XYLA_BACC1 (Q739D2) Xylose isomerase (EC 5.3.1.5)| Length = 445 Score = 78.2 bits (191), Expect = 8e-15 Identities = 33/61 (54%), Positives = 44/61 (72%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 439 +F + K+ YEG SK PL++K+YN EE++ K MK+ LRFS+A+WHTF G DPFGA Sbjct: 11 YFESVNKVLYEGKGSKNPLAFKYYNPEEIVGDKTMKEQLRFSIAYWHTFTADGTDPFGAA 70 Query: 440 T 442 T Sbjct: 71 T 71
>XYLA1_XANCP (Q8P9T9) Xylose isomerase 1 (EC 5.3.1.5)| Length = 446 Score = 77.0 bits (188), Expect = 2e-14 Identities = 33/62 (53%), Positives = 44/62 (70%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 E+FPGI KI +EG S PL++K Y+A + + GK M + LRF+VA+WH+F G G DPFG Sbjct: 11 EYFPGIGKIGFEGRDSDNPLAFKVYDANKQVAGKSMAEHLRFAVAYWHSFCGNGADPFGP 70 Query: 437 PT 442 T Sbjct: 71 GT 72
>XYLA2_XANCP (Q8P3H1) Xylose isomerase 2 (EC 5.3.1.5)| Length = 446 Score = 76.6 bits (187), Expect = 2e-14 Identities = 33/62 (53%), Positives = 44/62 (70%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 E+FPGI KI +EG S PL++K Y+A + + GK M + LRF+VA+WH+F G G DPFG Sbjct: 11 EYFPGIGKIGFEGRDSDNPLAFKVYDANKQVAGKTMAEHLRFAVAYWHSFCGNGADPFGP 70 Query: 437 PT 442 T Sbjct: 71 GT 72
>XYLA_RUMFL (Q9S306) Xylose isomerase (EC 5.3.1.5)| Length = 438 Score = 76.6 bits (187), Expect = 2e-14 Identities = 34/62 (54%), Positives = 44/62 (70%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 EFF I KI Y+GP S PLS+K+YN EEVI GK M++ L+F++++WHT G G D FG Sbjct: 2 EFFSNIGKIQYQGPKSTDPLSFKYYNPEEVINGKTMREHLKFALSWWHTMGGDGTDMFGC 61 Query: 437 PT 442 T Sbjct: 62 GT 63
>XYLA_CLOTS (P29441) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 76.6 bits (187), Expect = 2e-14 Identities = 33/62 (53%), Positives = 44/62 (70%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 ++F ++KI YEGP S P ++K+YN EEVI GK M++ LRFS+A+WHTF G D FG Sbjct: 3 KYFEKVSKIKYEGPKSNNPYAFKFYNPEEVIDGKTMEEHLRFSIAYWHTFTADGTDQFGK 62 Query: 437 PT 442 T Sbjct: 63 AT 64
>XYLA_TETHA (O82845) Xylose isomerase (EC 5.3.1.5)| Length = 435 Score = 75.9 bits (185), Expect = 4e-14 Identities = 32/62 (51%), Positives = 42/62 (67%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 ++F + K+ YEG +K +++ YN EE+I+GK MKD LRFSVAFWHT G DPFG Sbjct: 2 DYFENVPKVQYEGKNAKSKYAFRHYNPEEIIMGKPMKDHLRFSVAFWHTMTEDGSDPFGD 61 Query: 437 PT 442 T Sbjct: 62 GT 63
>XYLA_ENTFA (Q7C3R3) Xylose isomerase (EC 5.3.1.5)| Length = 435 Score = 74.3 bits (181), Expect = 1e-13 Identities = 31/58 (53%), Positives = 42/58 (72%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 433 +FP I KI YEG +K +++ YN+EE+I+GK MK+ LRF+VA+WHT G DPFG Sbjct: 3 YFPKIEKIKYEGTNTKNMYAFRHYNSEEIIMGKTMKEHLRFAVAYWHTMTQDGSDPFG 60
>XYLA1_XANAC (Q8PLL9) Xylose isomerase 1 (EC 5.3.1.5)| Length = 441 Score = 73.9 bits (180), Expect = 2e-13 Identities = 33/62 (53%), Positives = 43/62 (69%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 E+FPGI KI +EG S PL++K Y+A + I K M + LRF+VA+WH+F G G DPFG Sbjct: 7 EYFPGIGKIGFEGRDSDNPLAFKVYDANKTIGDKTMAEHLRFAVAYWHSFCGNGADPFGP 66 Query: 437 PT 442 T Sbjct: 67 GT 68
>XYLA2_XANAC (Q8PEW5) Xylose isomerase 2 (EC 5.3.1.5)| Length = 445 Score = 73.9 bits (180), Expect = 2e-13 Identities = 33/62 (53%), Positives = 43/62 (69%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 E+FPGI KI +EG S PL++K Y+A + I K M + LRF+VA+WH+F G G DPFG Sbjct: 11 EYFPGIGKIGFEGRDSDNPLAFKVYDANKTIGDKTMAEHLRFAVAYWHSFCGNGADPFGP 70 Query: 437 PT 442 T Sbjct: 71 GT 72
>XYLA_LACBR (P29443) Xylose isomerase (EC 5.3.1.5)| Length = 449 Score = 73.6 bits (179), Expect = 2e-13 Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKP-LSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 433 E++ G+ KI Y G KK L +++YN EE I+GKKMKDWLRF+VA+WHTF DPFG Sbjct: 4 EYWKGVDKIQYVGHQDKKSGLGFQYYNPEEEIMGKKMKDWLRFAVAYWHTFDQRLVDPFG 63 Query: 434 APT 442 T Sbjct: 64 DGT 66
>XYLA_BACLD (P77832) Xylose isomerase (EC 5.3.1.5)| Length = 448 Score = 72.4 bits (176), Expect = 5e-13 Identities = 32/61 (52%), Positives = 41/61 (67%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 439 FF I I YEG S+ P ++K+YN +E + GK MK+ LRF+VA+WHTF G DPFG Sbjct: 2 FFRNIGMIEYEGADSENPYAFKYYNPDEFVGGKTMKEHLRFAVAYWHTFDADGKDPFGDG 61 Query: 440 T 442 T Sbjct: 62 T 62
>XYLA_BACSU (P04788) Xylose isomerase (EC 5.3.1.5)| Length = 445 Score = 72.0 bits (175), Expect = 6e-13 Identities = 32/61 (52%), Positives = 42/61 (68%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 439 +F K+ YEG S PL++K+YN +EVI GK +K+ LRFS+A+WHTF G D FGA Sbjct: 11 YFGSANKVVYEGKDSTNPLAFKYYNPQEVIGGKTLKEHLRFSIAYWHTFTADGTDVFGAA 70 Query: 440 T 442 T Sbjct: 71 T 71
>XYLA_PHOLL (Q7N4P7) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 71.6 bits (174), Expect = 8e-13 Identities = 31/59 (52%), Positives = 42/59 (71%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 +F + +I+YEG S PL+++ YN EE+ILGKKMKD LRF+V +WH F G D FG+ Sbjct: 4 YFERVNRISYEGRQSNNPLAFRHYNPEEIILGKKMKDHLRFAVCYWHNFCWDGTDMFGS 62
>XYLA_LACPE (P21938) Xylose isomerase (EC 5.3.1.5)| Length = 449 Score = 70.5 bits (171), Expect = 2e-12 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKP-LSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 433 E++ G+ +I Y G KK L +++YN +EVI GKKM+DWLRFSVA+WHTF DPFG Sbjct: 4 EYWQGVDQIKYIGHQDKKSGLGFQYYNPDEVIGGKKMRDWLRFSVAYWHTFDQRLVDPFG 63 Query: 434 APT 442 T Sbjct: 64 DGT 66
>XYLA_SALTY (Q8ZL90) Xylose isomerase (EC 5.3.1.5)| Length = 440 Score = 69.7 bits (169), Expect = 3e-12 Identities = 27/58 (46%), Positives = 41/58 (70%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 433 +F + ++ YEGP S PL+++ YN +E++LGK+M+D LRF+ +WHTF G D FG Sbjct: 4 YFDQLDRVRYEGPQSTNPLAFRHYNPDELVLGKRMEDHLRFAACYWHTFCWNGADMFG 61
>XYLA_SALTI (Q7C637) Xylose isomerase (EC 5.3.1.5)| Length = 440 Score = 69.7 bits (169), Expect = 3e-12 Identities = 27/58 (46%), Positives = 41/58 (70%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 433 +F + ++ YEGP S PL+++ YN +E++LGK+M+D LRF+ +WHTF G D FG Sbjct: 4 YFDQLDRVRYEGPQSTNPLAFRHYNPDELVLGKRMEDHLRFAACYWHTFCWNGADMFG 61
>XYLA_KLEPN (P29442) Xylose isomerase (EC 5.3.1.5) (XI)| Length = 440 Score = 69.7 bits (169), Expect = 3e-12 Identities = 27/58 (46%), Positives = 41/58 (70%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 433 +F + ++ YEGP S PL+++ YN +E++LGK+M+D LRF+ +WHTF G D FG Sbjct: 4 YFDQLDRVRYEGPKSTNPLAFRHYNPDELVLGKRMEDHLRFAACYWHTFCWNGADMFG 61
>XYLA_PHOPR (Q6LUY7) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 68.9 bits (167), Expect = 5e-12 Identities = 31/62 (50%), Positives = 41/62 (66%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 EFF I KI +EG + PL+++ Y+AE +ILGK MK+ LRF+ +WH F G D FGA Sbjct: 3 EFFKNINKIQFEGTDAINPLAFRHYDAERMILGKSMKEHLRFAACYWHNFCWPGSDVFGA 62 Query: 437 PT 442 T Sbjct: 63 AT 64
>XYLA_LACLA (Q9CFG7) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 66.6 bits (161), Expect = 3e-11 Identities = 29/61 (47%), Positives = 39/61 (63%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 439 +F IA I YEG +K +++ YN EEV+ GK M++ L F++AFWHT G DPFG Sbjct: 3 YFNDIAPIKYEGTKTKNMFAFRHYNPEEVVAGKTMEEQLHFALAFWHTITMDGSDPFGGA 62 Query: 440 T 442 T Sbjct: 63 T 63
>XYLA_PSESM (Q880Z4) Xylose isomerase (EC 5.3.1.5)| Length = 438 Score = 66.2 bits (160), Expect = 3e-11 Identities = 27/61 (44%), Positives = 41/61 (67%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 439 +FP + K+ YEGP S PL+++ Y+A++ +LGK M++ LR + +WHTF G D FG Sbjct: 3 YFPTVDKVIYEGPDSDSPLAFRHYDADKRVLGKPMREHLRMAACYWHTFVWPGADMFGVG 62 Query: 440 T 442 T Sbjct: 63 T 63
>XYLA_YERPE (Q8Z9Z1) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 65.5 bits (158), Expect = 6e-11 Identities = 28/59 (47%), Positives = 39/59 (66%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 +F + ++ YEG S PL++ YN +E+ILGK+M D LRF+ +WHTF G D FGA Sbjct: 4 YFNELEQVRYEGSQSTNPLAFHHYNPDEMILGKRMADHLRFAACYWHTFCWGGADMFGA 62
>XYLA_STAXY (P27157) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 65.5 bits (158), Expect = 6e-11 Identities = 29/54 (53%), Positives = 35/54 (64%) Frame = +2 Query: 272 IAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 433 I K+NYEGP S S+K+YN EE + M + LRFSVA+WHTF DPFG Sbjct: 6 INKVNYEGPKSNNAFSFKYYNPEEKLGNHSMSELLRFSVAYWHTFTADLSDPFG 59
>XYLA_ECOLI (P00944) Xylose isomerase (EC 5.3.1.5) (D-xylulose keto-isomerase)| Length = 440 Score = 65.5 bits (158), Expect = 6e-11 Identities = 25/58 (43%), Positives = 40/58 (68%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 433 +F + ++ YEG S PL+++ YN +E++LGK+M++ LRF+ +WHTF G D FG Sbjct: 4 YFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMFG 61
>XYLA_ECOL6 (Q8FCE3) Xylose isomerase (EC 5.3.1.5)| Length = 440 Score = 65.5 bits (158), Expect = 6e-11 Identities = 25/58 (43%), Positives = 40/58 (68%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 433 +F + ++ YEG S PL+++ YN +E++LGK+M++ LRF+ +WHTF G D FG Sbjct: 4 YFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMFG 61
>XYLA_ECO57 (Q7A9X4) Xylose isomerase (EC 5.3.1.5)| Length = 440 Score = 65.5 bits (158), Expect = 6e-11 Identities = 25/58 (43%), Positives = 40/58 (68%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 433 +F + ++ YEG S PL+++ YN +E++LGK+M++ LRF+ +WHTF G D FG Sbjct: 4 YFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMFG 61
>XYLA_HAEIN (P44398) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 63.2 bits (152), Expect = 3e-10 Identities = 28/58 (48%), Positives = 38/58 (65%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFG 433 +F I KI++EG S P ++K Y+A +VILGK M + LR +V +WHTF G D FG Sbjct: 4 YFDKIEKISFEGEKSTNPFAFKHYDANQVILGKTMAEHLRLAVCYWHTFCWNGNDMFG 61
>XYLA_BIFLO (Q8G3Q1) Xylose isomerase (EC 5.3.1.5)| Length = 449 Score = 63.2 bits (152), Expect = 3e-10 Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 2/59 (3%) Frame = +2 Query: 272 IAKINYEGPTS--KKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAPT 442 + KI Y G K+ ++ +Y+A++V+ GKKMKDWLRF VA+WHTF DPFG T Sbjct: 6 VDKIEYVGRAKGPKEDFAFHYYDADKVVAGKKMKDWLRFGVAWWHTFNQELVDPFGTGT 64
>XYLA_OCEIH (Q8ELU7) Xylose isomerase (EC 5.3.1.5)| Length = 439 Score = 62.0 bits (149), Expect = 6e-10 Identities = 29/61 (47%), Positives = 37/61 (60%) Frame = +2 Query: 260 FFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGAP 439 +F I I YEG S P ++K+YN E I G+ M++ LRF VA+WHTF DPFG Sbjct: 3 YFNEIGTIQYEGAKSDNPFAFKFYNPTESINGQTMEEHLRFGVAYWHTFTEDLSDPFGNG 62 Query: 440 T 442 T Sbjct: 63 T 63
>XYLA_BRAJA (Q89VC7) Xylose isomerase (EC 5.3.1.5)| Length = 440 Score = 54.7 bits (130), Expect = 1e-07 Identities = 20/62 (32%), Positives = 38/62 (61%) Frame = +2 Query: 257 EFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDPFGA 436 +FF + + G + +++WY+ + ++ G++++D LRF+V +WH+ GGDPFG Sbjct: 6 KFFEESTPVAFAGQDAGPAPAFRWYDKDRLVHGRRLEDHLRFAVCYWHSLCWPGGDPFGG 65 Query: 437 PT 442 T Sbjct: 66 ET 67
>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 33.1 bits (74), Expect = 0.31 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Frame = -1 Query: 270 PGKNSPSQSSEAASPHLAPMSAG----QVSCAATAADRQRDEASSRTRSSPPF 124 P N + + SP +AP+S G ++ ++AD Q D S RTRS PF Sbjct: 181 PEVNRREEGRTSESPEVAPLSRGPGRHEMHAPGSSADLQPDTWSRRTRSPEPF 233
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 32.0 bits (71), Expect = 0.70 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = -1 Query: 258 SPSQSSEAASPHLAPMSAGQVSCAATAADRQRDEASSRTRSSPPFMAQG 112 SP + AASP +P+ AG+++ AATA + + +S + A G Sbjct: 1535 SPGATPPAASPKTSPLPAGKLTAAATAPQTKGNSSSGAANARQQTAATG 1583
>REPS2_HUMAN (Q8NFH8) RalBP1-associated Eps domain-containing protein 2| (RalBP1-interacting protein 2) (Partner of RalBP1) Length = 660 Score = 30.8 bits (68), Expect = 1.6 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Frame = -1 Query: 432 PKGSPPVPRNVCQNAT-LNRNQSFIFFPRITSSALYHL*ESGFLLVGPS*LILAMPGKNS 256 P PP P+ A+ L+ N+ +F P + ++ +SG L P A+P + Sbjct: 477 PPTPPPRPQKTHSRASSLDLNK--VFQPSVPAT------KSGLLPPPP-----ALPPRPC 523 Query: 255 PSQSSEAASPHLAPMSAGQVSCAATAADRQRDEASSRTRSSP 130 PSQS + + L P + S AA ++ ++D S+ S P Sbjct: 524 PSQSEQVSEAELLPQLSRAPSQAAESSPAKKDVLYSQPPSKP 565
>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac| Length = 1120 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = -1 Query: 252 SQSSEAASPHLAPMSAGQVSCAATAADRQRDEASS 148 S+++ A+S A SAGQ S +ATAA + + A+S Sbjct: 298 SKTAAASSASAASTSAGQASASATAAGKSAESAAS 332
>DNAJ_LACSK (O87778) Chaperone protein dnaJ| Length = 383 Score = 29.6 bits (65), Expect = 3.5 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Frame = +2 Query: 215 GAKCGDAASDDWEGEFFPGIAKINYEGPTSKKPLSYKW-YNAEEVILGKKMKDWLRFS-V 388 G G DD FF G A+ GP L Y+ EE + GK+ K + +S Sbjct: 93 GGAEGFGGFDDIFSSFFGGGARQQPNGPRQGSDLQYRMDLKFEEAVFGKETK--ISYSRE 150 Query: 389 AFWHTFRGTGGDP 427 A HT G+G P Sbjct: 151 AECHTCHGSGAKP 163
>RIMS1_HUMAN (Q86UR5) Regulating synaptic membrane exocytosis protein 1| (Rab3-interacting molecule 1) (RIM 1) Length = 1692 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = -1 Query: 270 PGKNSPSQSSEAASPHLAPMSAGQVSCAATAADRQRDEASSRTRSSPP 127 P + + S +AA P P + + A ++ +ASSR+RS PP Sbjct: 221 PLSTAAASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPP 268
>SNPC4_HUMAN (Q5SXM2) snRNA-activating protein complex subunit 4 (SNAPc subunit| 4) (snRNA-activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) (Proximal sequence element-binding transcription factor alpha subunit) (PSE-binding factor alpha Length = 1469 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +2 Query: 239 SDDWEGEFFPGIAKINYEGPTSKKPLSYKWYNAEEVILGKKMKDWLR 379 S DWE I+ IN+EG S + + W N+E + K ++W R Sbjct: 260 SHDWEK-----ISNINFEGSRSAEEIRKFWQNSEHPSINK--QEWSR 299
>Y401_BUCAP (Q8K9D9) Hypothetical protein BUsg401| Length = 219 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = +2 Query: 278 KINYEGPTSKKPLSYKW--YNAEEVILGKKMKDWLRFSVAFWHTFRGTGGDP 427 +I+YE KK + KW N +E+IL K+K W + TGG+P Sbjct: 51 QISYEKIIMKKKSNRKWSYMNVKEIILIIKIKKWTAKHIVI------TGGEP 96 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,278,637 Number of Sequences: 219361 Number of extensions: 916210 Number of successful extensions: 2786 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 2690 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2785 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
