ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast58b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 82 8e-16
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 64 2e-10
3APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 47 2e-05
4APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 41 0.001
5Y505_PASMU (Q9CNC7) Hypothetical UPF0275 protein PM0505 34 0.20
6GS14_BACSU (P80871) General stress protein 14 (GSP14) (EC 1.6.99.-) 31 1.7
7PPOX_YEAST (P40012) Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO) 30 3.7
8MCD4_YEAST (P36051) GPI-anchor biosynthetic protein MCD4 29 4.8
9PMM2_MOUSE (Q9Z2M7) Phosphomannomutase 2 (EC 5.4.2.8) (PMM 2) 28 8.2
10RBL2_THIDA (Q60028) Ribulose bisphosphate carboxylase (EC 4.1.1.... 28 8.2

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 81.6 bits (200), Expect = 8e-16
 Identities = 46/94 (48%), Positives = 57/94 (60%)
 Frame = +2

Query: 155 FRTVYAFGDSFTDTGNTHSTTGPYSYGYVSNPPYGATFFHRSTNRYSDGRLVVDFLATDA 334
           F  ++ FGDS +DTG      G  +  Y  NPPYG TFFHRST RYSDGRL++DF+A   
Sbjct: 32  FPAIFNFGDSNSDTG------GKAAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIA--- 82

Query: 335 LALPSFLPPYLSLASSPNATNKYYGVNFAVAGAT 436
               SF  PYLS   S   +N  +G +FA AG+T
Sbjct: 83  ---ESFNLPYLSPYLSSLGSNFKHGADFATAGST 113



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 37/93 (39%), Positives = 52/93 (55%)
 Frame = +2

Query: 155 FRTVYAFGDSFTDTGNTHSTTGPYSYGYVSNPPYGATFFHRSTNRYSDGRLVVDFLATDA 334
           F  ++ FGDS +DTG   +  G       + PP+G++FF     RY DGRLV+DF+A ++
Sbjct: 28  FPAIFNFGDSNSDTGGLSAAFGQ------AGPPHGSSFFGSPAGRYCDGRLVIDFIA-ES 80

Query: 335 LALPSFLPPYLSLASSPNATNKYYGVNFAVAGA 433
           L L     PYLS       +N  +G NFA AG+
Sbjct: 81  LGL-----PYLSAFLDSVGSNFSHGANFATAGS 108



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
 Frame = +2

Query: 164 VYAFGDSFTDTGNTHSTTGPYSYGYVSNPPYGATF-FHRSTNRYSDGRLVVDFLATDALA 340
           V+ FGDS  DTGN ++        Y    PYG  F F  +T R+S+G +  D+LA   + 
Sbjct: 205 VFFFGDSVFDTGNNNNLETKIKSNY---RPYGMDFKFRVATGRFSNGMVASDYLA-KYMG 260

Query: 341 LPSFLPPYLSLASSPNATNKYYGVNFAVAGA 433
           +   +P YL     PN  +   GV+FA  GA
Sbjct: 261 VKEIVPAYLDPKIQPN--DLLTGVSFASGGA 289



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
 Frame = +2

Query: 164 VYAFGDSFTDTGNTHSTTGPYSYGYVSNPPYGATF-FHRSTNRYSDGRLVVDFLATDALA 340
           V+ FGDS  DTGN ++        Y    PYG  F    +T R+S+GR+  D++ +  L 
Sbjct: 126 VFFFGDSIFDTGNNNNLDTKLKCNY---RPYGMDFPMGVATGRFSNGRVASDYI-SKYLG 181

Query: 341 LPSFLPPYLSLASSPN----ATNKYYGVNFAVAGA 433
           +   +P Y+      N     ++   GV+FA  GA
Sbjct: 182 VKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGA 216



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>Y505_PASMU (Q9CNC7) Hypothetical UPF0275 protein PM0505|
          Length = 142

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = +2

Query: 224 YSYGYVSNPPYGATFFHRSTNRYSDGRLVVDFLAT--DALALPSFLPPYLSLASSPNATN 397
           +SYG  +N PY A   + S NR +DG ++ D+L+T  D+ A   F    L+    P  T 
Sbjct: 5   FSYGTYNNRPYKACGVYESDNRENDG-VITDYLSTIPDSYADNGF--KVLAAVKDPTITR 61

Query: 398 KYYGVNFAVAGATAIEHD 451
           ++     + A    IEHD
Sbjct: 62  EWID---SQAFEALIEHD 76



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>GS14_BACSU (P80871) General stress protein 14 (GSP14) (EC 1.6.99.-)|
          Length = 175

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +2

Query: 284 NRYSDGRLVVDFLATDALALPSFLPPYLSLASSPNATNKYYGVNFAVA 427
           N YS   L+  F AT  L    +LPPY+           +YGVN+A A
Sbjct: 120 NHYSISELLKPFQATSNLIGMKYLPPYV-----------FYGVNYAAA 156



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>PPOX_YEAST (P40012) Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO)|
          Length = 539

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 329 DALALPSFLPPYLSLASSPNATNKYYGVNFAVAGATAIEH 448
           D++   +F P +  L+++PNA NKY  V   + G    EH
Sbjct: 401 DSVIERNFKPLFDKLSTNPNALNKYTKVTAMIGGCMLNEH 440



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>MCD4_YEAST (P36051) GPI-anchor biosynthetic protein MCD4|
          Length = 919

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +2

Query: 233 GYVSNPPYGATFFHRSTNRYSDGRLVVDFLATDALALPSFLPPYLSLASSPNATNKY-YG 409
           G+ SNP    +FF++ST+ YS G              P  LP +   AS PN  + + Y 
Sbjct: 125 GWKSNPVNFDSFFNQSTHTYSFGS-------------PDILPMFKDGASDPNKVDTWMYD 171

Query: 410 VNFAVAGATAIEHD 451
             F     ++IE D
Sbjct: 172 HTFEDFTQSSIELD 185



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>PMM2_MOUSE (Q9Z2M7) Phosphomannomutase 2 (EC 5.4.2.8) (PMM 2)|
          Length = 242

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 155 FRTVYAFGDSFTDTGNTHST-TGPYSYGYVSNPP 253
           ++T+Y FGD     GN H   T P + GY    P
Sbjct: 197 YKTIYFFGDKTMPGGNDHEIFTDPRTVGYTVTAP 230



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>RBL2_THIDA (Q60028) Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO)|
          Length = 459

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 197 GNTHSTTGPYSYGYVSNPPYGATFFHRSTNRYSDGRLVVDF 319
           GN  +T G  SYG++ +P  GA    +S   +  G   ++F
Sbjct: 386 GNVINTAGGGSYGHIDSPAAGAISLRQSYECWKQGADPIEF 426


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,983,644
Number of Sequences: 219361
Number of extensions: 374949
Number of successful extensions: 1295
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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