ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast58b04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY795560.1| Triticum aestivum AS2 mRNA, complete cds Length = 1237 Score = 763 bits (385), Expect = 0.0 Identities = 406/413 (98%) Strand = Plus / Plus Query: 15 ggcgcgaaggatggcctcgtcgtcggcgtcgtcgttgccggcgccgggcggatcggtgat 74 |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 185 ggcgtgaaggatggcctcgtcgtcggcgtcttcgttgccggcgccgggaggatcggtgat 244 Query: 75 caccttggccgcctcgtcggcggggggcaacggcgccggcggggtgtgcggcacggggtc 134 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 245 caccttggccgcctcatcggcggggggcaacggcgccggcggcgtgtgcggcacggggtc 304 Query: 135 gccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcgcc 194 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 gccgtgcgcggcgtgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcgcc 364 Query: 195 ctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgccag 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 ctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgccag 424 Query: 255 caacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaactc 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 caacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaactc 484 Query: 315 cctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtaat 374 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 485 cctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtcat 544 Query: 375 ctccatcctccagcgcaacctccgccagctccagcaggacctcgcccgcgcca 427 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 ctccatcctccagcgcaacctccgccagctccagcaggacctcgcccgcgcca 597
>ref|NM_190212.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 810 Score = 539 bits (272), Expect = e-150 Identities = 299/308 (97%) Strand = Plus / Plus Query: 120 gtgcggcacggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctga 179 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 96 gtgcggcacggggtcgccgtgcgcggcgtgcaagttcctccgccgcaagtgccagcccga 155 Query: 180 ctgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccg 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 156 ctgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtccacgtgcaccg 215 Query: 240 cgtcttcggcgccagcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcga 299 |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 216 cgtcttcggcgcgagcaacgtgaccaagctgctgaacgagctgcacccctaccagcgcga 275 Query: 300 ggacgccgtgaactccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacgg 359 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 ggacgccgtgaactcgctcgcctacgaggccgacatgcgcctccgcgaccccgtctacgg 335 Query: 360 ctgcgtcgccgtaatctccatcctccagcgcaacctccgccagctccagcaggacctcgc 419 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 ctgcgtcgccatcatctccatcctccagcgcaacctccgccagctccagcaggacctcgc 395 Query: 420 ccgcgcca 427 |||||||| Sbjct: 396 ccgcgcca 403
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 539 bits (272), Expect = e-150 Identities = 299/308 (97%) Strand = Plus / Plus Query: 120 gtgcggcacggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctga 179 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 38670552 gtgcggcacggggtcgccgtgcgcggcgtgcaagttcctccgccgcaagtgccagcccga 38670611 Query: 180 ctgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccg 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 38670612 ctgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtccacgtgcaccg 38670671 Query: 240 cgtcttcggcgccagcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcga 299 |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 38670672 cgtcttcggcgcgagcaacgtgaccaagctgctgaacgagctgcacccctaccagcgcga 38670731 Query: 300 ggacgccgtgaactccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacgg 359 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38670732 ggacgccgtgaactcgctcgcctacgaggccgacatgcgcctccgcgaccccgtctacgg 38670791 Query: 360 ctgcgtcgccgtaatctccatcctccagcgcaacctccgccagctccagcaggacctcgc 419 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38670792 ctgcgtcgccatcatctccatcctccagcgcaacctccgccagctccagcaggacctcgc 38670851 Query: 420 ccgcgcca 427 |||||||| Sbjct: 38670852 ccgcgcca 38670859 Score = 163 bits (82), Expect = 6e-37 Identities = 214/258 (82%) Strand = Plus / Minus Query: 133 tcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcg 192 |||||||||||||| ||||||||||| || || ||||||| ||| | |||||||||||| Sbjct: 3551100 tcgccgtgcgcggcgtgcaagttcctgcggcggaagtgcctgccgggctgcgtgttcgct 3551041 Query: 193 ccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgcc 252 || |||||||||||||| | ||||||||||||| |||| ||| || ||||||||| Sbjct: 3551040 ccttacttcccgccggaggagccgcagaagttcgccaacgtccacaaggtgttcggcgcc 3550981 Query: 253 agcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaac 312 || ||||| |||||||| || |||||||| | ||| ||||||| ||||||||||||| | Sbjct: 3550980 agtaacgtcaccaagctcctcaacgagctgctgccgcaccagcgggaggacgccgtgagc 3550921 Query: 313 tccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgta 372 || ||||| ||||||||||| ||| || |||||||||||||||||||||| || Sbjct: 3550920 tcgctcgcgtacgaggccgaggcccgcgtcaaggaccccgtctacggctgcgtcggcgcc 3550861 Query: 373 atctccatcctccagcgc 390 |||||| ||||||||||| Sbjct: 3550860 atctccgtcctccagcgc 3550843 Score = 46.1 bits (23), Expect = 0.095 Identities = 38/43 (88%) Strand = Plus / Minus Query: 231 cgtgcaccgcgtcttcggcgccagcaacgtgaccaagctgctg 273 ||||||| | || |||||||||||||||||| | ||||||||| Sbjct: 32586918 cgtgcacagggtgttcggcgccagcaacgtggcgaagctgctg 32586876 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 22 aggatggcctcgtcgtcggcgtcgtcgttgccggcgccgggcggatcggtgatcacc 78 |||||||| || ||||| |||||||| ||||||||||| || |||||||||||| Sbjct: 38670454 aggatggcgtcatcgtcagcgtcgtccgtgccggcgccgtcggggtcggtgatcacc 38670510 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gtcttcggcgccagcaacgt 260 |||||||||||||||||||| Sbjct: 35251553 gtcttcggcgccagcaacgt 35251572 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cggcggggggcaacggcgccggcg 115 |||||| ||||||||||||||||| Sbjct: 24974779 cggcggtgggcaacggcgccggcg 24974802
>dbj|AB200237.1| Oryza sativa (japonica cultivar-group) CRLL3 mRNA for LOB domain protein, complete cds Length = 810 Score = 539 bits (272), Expect = e-150 Identities = 299/308 (97%) Strand = Plus / Plus Query: 120 gtgcggcacggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctga 179 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 96 gtgcggcacggggtcgccgtgcgcggcgtgcaagttcctccgccgcaagtgccagcccga 155 Query: 180 ctgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccg 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 156 ctgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtccacgtgcaccg 215 Query: 240 cgtcttcggcgccagcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcga 299 |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 216 cgtcttcggcgcgagcaacgtgaccaagctgctgaacgagctgcacccctaccagcgcga 275 Query: 300 ggacgccgtgaactccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacgg 359 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 ggacgccgtgaactcgctcgcctacgaggccgacatgcgcctccgcgaccccgtctacgg 335 Query: 360 ctgcgtcgccgtaatctccatcctccagcgcaacctccgccagctccagcaggacctcgc 419 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 ctgcgtcgccatcatctccatcctccagcgcaacctccgccagctccagcaggacctcgc 395 Query: 420 ccgcgcca 427 |||||||| Sbjct: 396 ccgcgcca 403
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 539 bits (272), Expect = e-150 Identities = 299/308 (97%) Strand = Plus / Plus Query: 120 gtgcggcacggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctga 179 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 128525 gtgcggcacggggtcgccgtgcgcggcgtgcaagttcctccgccgcaagtgccagcccga 128584 Query: 180 ctgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccg 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 128585 ctgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtccacgtgcaccg 128644 Query: 240 cgtcttcggcgccagcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcga 299 |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 128645 cgtcttcggcgcgagcaacgtgaccaagctgctgaacgagctgcacccctaccagcgcga 128704 Query: 300 ggacgccgtgaactccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacgg 359 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128705 ggacgccgtgaactcgctcgcctacgaggccgacatgcgcctccgcgaccccgtctacgg 128764 Query: 360 ctgcgtcgccgtaatctccatcctccagcgcaacctccgccagctccagcaggacctcgc 419 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128765 ctgcgtcgccatcatctccatcctccagcgcaacctccgccagctccagcaggacctcgc 128824 Query: 420 ccgcgcca 427 |||||||| Sbjct: 128825 ccgcgcca 128832 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 22 aggatggcctcgtcgtcggcgtcgtcgttgccggcgccgggcggatcggtgatcacc 78 |||||||| || ||||| |||||||| ||||||||||| || |||||||||||| Sbjct: 128427 aggatggcgtcatcgtcagcgtcgtccgtgccggcgccgtcggggtcggtgatcacc 128483
>dbj|AK119575.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B04, full insert sequence Length = 1515 Score = 539 bits (272), Expect = e-150 Identities = 299/308 (97%) Strand = Plus / Plus Query: 120 gtgcggcacggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctga 179 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 564 gtgcggcacggggtcgccgtgcgcggcgtgcaagttcctccgccgcaagtgccagcccga 623 Query: 180 ctgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccg 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 624 ctgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtccacgtgcaccg 683 Query: 240 cgtcttcggcgccagcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcga 299 |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 684 cgtcttcggcgcgagcaacgtgaccaagctgctgaacgagctgcacccctaccagcgcga 743 Query: 300 ggacgccgtgaactccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacgg 359 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 ggacgccgtgaactcgctcgcctacgaggccgacatgcgcctccgcgaccccgtctacgg 803 Query: 360 ctgcgtcgccgtaatctccatcctccagcgcaacctccgccagctccagcaggacctcgc 419 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 ctgcgtcgccatcatctccatcctccagcgcaacctccgccagctccagcaggacctcgc 863 Query: 420 ccgcgcca 427 |||||||| Sbjct: 864 ccgcgcca 871 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 22 aggatggcctcgtcgtcggcgtcgtcgttgccggcgccgggcggatcggtgatcacc 78 |||||||| || ||||| |||||||| ||||||||||| || |||||||||||| Sbjct: 466 aggatggcgtcatcgtcagcgtcgtccgtgccggcgccgtcggggtcggtgatcacc 522
>dbj|AK071407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089G14, full insert sequence Length = 1464 Score = 539 bits (272), Expect = e-150 Identities = 299/308 (97%) Strand = Plus / Plus Query: 120 gtgcggcacggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctga 179 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 396 gtgcggcacggggtcgccgtgcgcggcgtgcaagttcctccgccgcaagtgccagcccga 455 Query: 180 ctgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccg 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 456 ctgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtccacgtgcaccg 515 Query: 240 cgtcttcggcgccagcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcga 299 |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 516 cgtcttcggcgcgagcaacgtgaccaagctgctgaacgagctgcacccctaccagcgcga 575 Query: 300 ggacgccgtgaactccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacgg 359 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 576 ggacgccgtgaactcgctcgcctacgaggccgacatgcgcctccgcgaccccgtctacgg 635 Query: 360 ctgcgtcgccgtaatctccatcctccagcgcaacctccgccagctccagcaggacctcgc 419 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 ctgcgtcgccatcatctccatcctccagcgcaacctccgccagctccagcaggacctcgc 695 Query: 420 ccgcgcca 427 |||||||| Sbjct: 696 ccgcgcca 703 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 22 aggatggcctcgtcgtcggcgtcgtcgttgccggcgccgggcggatcggtgatcacc 78 |||||||| || ||||| |||||||| ||||||||||| || |||||||||||| Sbjct: 298 aggatggcgtcatcgtcagcgtcgtccgtgccggcgccgtcggggtcggtgatcacc 354
>gb|AY940681.1| Zea mays ASYMMETRIC LEAVES2 mRNA, complete cds Length = 1442 Score = 482 bits (243), Expect = e-133 Identities = 294/311 (94%) Strand = Plus / Plus Query: 117 ggtgtgcggcacggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcc 176 ||||||||||||||| || || ||||| || ||||||||||| || |||||||||||||| Sbjct: 228 ggtgtgcggcacgggctccccatgcgctgcgtgcaagttcctgcgtcgcaagtgccagcc 287 Query: 177 tgactgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgca 236 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 288 ggactgcgtgttcgcgccctacttcccaccggacaacccgcagaagttcgtgcacgtgca 347 Query: 237 ccgcgtcttcggcgccagcaacgtgaccaagctgctgaacgagctccacccgtaccagcg 296 ||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 348 ccgcgtcttcggcgcgagcaacgtgaccaagctgctgaacgagctccaccccttccagcg 407 Query: 297 cgaggacgccgtgaactccctcgcctacgaggccgacatgcgcctccgcgaccccgtcta 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 cgaggacgccgtgaactccctcgcctacgaggccgacatgcgcctccgcgaccccgtcta 467 Query: 357 cggctgcgtcgccgtaatctccatcctccagcgcaacctccgccagctccagcaggacct 416 ||||||||||| ||| |||||||||||||||| |||||| || ||||||||||||||||| Sbjct: 468 cggctgcgtcggcgtcatctccatcctccagcacaacctacgacagctccagcaggacct 527 Query: 417 cgcccgcgcca 427 ||||||||||| Sbjct: 528 cgcccgcgcca 538
>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05, complete sequence Length = 107407 Score = 444 bits (224), Expect = e-121 Identities = 356/400 (89%) Strand = Plus / Minus Query: 27 ggcctcgtcgtcggcgtcgtcgttgccggcgccgggcggatcggtgatcaccttggccgc 86 |||||||||||||||||||||||||||| | || ||| |||||||||||| | || | Sbjct: 7846 ggcctcgtcgtcggcgtcgtcgttgccgctgtcgtccggctcggtgatcaccgtctcctc 7787 Query: 87 ctcgtcggcggggggcaacggcgccggcggggtgtgcggcacggggtcgccgtgcgcggc 146 ||| |||||| |||| || ||||||| | |||| |||||||||||||||||||| Sbjct: 7786 gtcgccggcggtgggcgcgagctccggcggcggcggcgggacggggtcgccgtgcgcggc 7727 Query: 147 ctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcgccctacttcccgcc 206 ||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 7726 gtgcaagttcctgcggcgcaagtgccagccggactgcgtgttcgcgccctacttcccgcc 7667 Query: 207 ggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgccagcaacgtgaccaa 266 ||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 7666 ggacaacccgcagaagttcgtgcacgtgcaccgggtgttcggcgcgagcaacgtgaccaa 7607 Query: 267 gctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaactccctcgcctacga 326 ||||||||||||||||||||| |||||||| |||||||| |||||||| || || ||||| Sbjct: 7606 gctgctgaacgagctccacccttaccagcgggaggacgcggtgaactcgctggcgtacga 7547 Query: 327 ggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtaatctccatcctcca 386 ||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| Sbjct: 7546 ggccgacatgcgcctccgcgaccccgtctacggctgcgtcggcgtcatctccgtcctcca 7487 Query: 387 gcgcaacctccgccagctccagcaggacctcgcccgcgcc 426 || | | ||||||||||||||||| |||||| |||||||| Sbjct: 7486 gcaccagctccgccagctccagcaagacctctcccgcgcc 7447
>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0084P24, complete sequence Length = 148784 Score = 444 bits (224), Expect = e-121 Identities = 356/400 (89%) Strand = Plus / Minus Query: 27 ggcctcgtcgtcggcgtcgtcgttgccggcgccgggcggatcggtgatcaccttggccgc 86 |||||||||||||||||||||||||||| | || ||| |||||||||||| | || | Sbjct: 112528 ggcctcgtcgtcggcgtcgtcgttgccgctgtcgtccggctcggtgatcaccgtctcctc 112469 Query: 87 ctcgtcggcggggggcaacggcgccggcggggtgtgcggcacggggtcgccgtgcgcggc 146 ||| |||||| |||| || ||||||| | |||| |||||||||||||||||||| Sbjct: 112468 gtcgccggcggtgggcgcgagctccggcggcggcggcgggacggggtcgccgtgcgcggc 112409 Query: 147 ctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcgccctacttcccgcc 206 ||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112408 gtgcaagttcctgcggcgcaagtgccagccggactgcgtgttcgcgccctacttcccgcc 112349 Query: 207 ggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgccagcaacgtgaccaa 266 ||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 112348 ggacaacccgcagaagttcgtgcacgtgcaccgggtgttcggcgcgagcaacgtgaccaa 112289 Query: 267 gctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaactccctcgcctacga 326 ||||||||||||||||||||| |||||||| |||||||| |||||||| || || ||||| Sbjct: 112288 gctgctgaacgagctccacccttaccagcgggaggacgcggtgaactcgctggcgtacga 112229 Query: 327 ggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtaatctccatcctcca 386 ||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| Sbjct: 112228 ggccgacatgcgcctccgcgaccccgtctacggctgcgtcggcgtcatctccgtcctcca 112169 Query: 387 gcgcaacctccgccagctccagcaggacctcgcccgcgcc 426 || | | ||||||||||||||||| |||||| |||||||| Sbjct: 112168 gcaccagctccgccagctccagcaagacctctcccgcgcc 112129
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 444 bits (224), Expect = e-121 Identities = 356/400 (89%) Strand = Plus / Minus Query: 27 ggcctcgtcgtcggcgtcgtcgttgccggcgccgggcggatcggtgatcaccttggccgc 86 |||||||||||||||||||||||||||| | || ||| |||||||||||| | || | Sbjct: 20274256 ggcctcgtcgtcggcgtcgtcgttgccgctgtcgtccggctcggtgatcaccgtctcctc 20274197 Query: 87 ctcgtcggcggggggcaacggcgccggcggggtgtgcggcacggggtcgccgtgcgcggc 146 ||| |||||| |||| || ||||||| | |||| |||||||||||||||||||| Sbjct: 20274196 gtcgccggcggtgggcgcgagctccggcggcggcggcgggacggggtcgccgtgcgcggc 20274137 Query: 147 ctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcgccctacttcccgcc 206 ||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 20274136 gtgcaagttcctgcggcgcaagtgccagccggactgcgtgttcgcgccctacttcccgcc 20274077 Query: 207 ggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgccagcaacgtgaccaa 266 ||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 20274076 ggacaacccgcagaagttcgtgcacgtgcaccgggtgttcggcgcgagcaacgtgaccaa 20274017 Query: 267 gctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaactccctcgcctacga 326 ||||||||||||||||||||| |||||||| |||||||| |||||||| || || ||||| Sbjct: 20274016 gctgctgaacgagctccacccttaccagcgggaggacgcggtgaactcgctggcgtacga 20273957 Query: 327 ggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtaatctccatcctcca 386 ||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| Sbjct: 20273956 ggccgacatgcgcctccgcgaccccgtctacggctgcgtcggcgtcatctccgtcctcca 20273897 Query: 387 gcgcaacctccgccagctccagcaggacctcgcccgcgcc 426 || | | ||||||||||||||||| |||||| |||||||| Sbjct: 20273896 gcaccagctccgccagctccagcaagacctctcccgcgcc 20273857 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 234 gcaccgcgtcttcggcgccagcaac 258 ||||||||||||||||||||||||| Sbjct: 1206770 gcaccgcgtcttcggcgccagcaac 1206746 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 26 tggcctcgtcgtcggcgtcgtcgttgccggcgcc 59 |||||||||||||| ||||||| | ||||||||| Sbjct: 16227610 tggcctcgtcgtcgtcgtcgtcctcgccggcgcc 16227643 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 gaccccgtctacggctgcgtcg 367 |||||||||||||||||||||| Sbjct: 16192401 gaccccgtctacggctgcgtcg 16192380 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gtcttcggcgccagcaacgt 260 |||||||||||||||||||| Sbjct: 3784902 gtcttcggcgccagcaacgt 3784883 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tcgtcgtcggcgtcgtcgttgccg 54 ||||||||||||||| |||||||| Sbjct: 1692684 tcgtcgtcggcgtcggcgttgccg 1692707
>gb|DQ327701.1| Zea mays ramosa 2 (ra2) gene, complete cds Length = 6032 Score = 218 bits (110), Expect = 1e-53 Identities = 203/234 (86%) Strand = Plus / Plus Query: 134 cgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcgc 193 ||||||||||||| ||||||||||| || |||||||||| ||| | ||||||||||||| Sbjct: 2632 cgccgtgcgcggcgtgcaagttcctgcggcgcaagtgcctgccggggtgcgtgttcgcgc 2691 Query: 194 cctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgcca 253 |||||||||||||||| | ||||||||||||| |||||||| || |||||||||| Sbjct: 2692 cctacttcccgccggaggagccgcagaagttcgccaacgtgcacaaggtgttcggcgcca 2751 Query: 254 gcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaact 313 |||||||||||||||||||||||||||| | ||| ||||||| ||||||||||||| || Sbjct: 2752 gcaacgtgaccaagctgctgaacgagctgctgccgcaccagcgggaggacgccgtgagct 2811 Query: 314 ccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcg 367 | ||||||||||||||||| |||| || |||||||||||||||||||||| Sbjct: 2812 cgctcgcctacgaggccgaggcgcgcgtcaaggaccccgtctacggctgcgtcg 2865
>gb|DQ327703.1| Sorghum bicolor ramosa 2 gene, partial cds Length = 804 Score = 216 bits (109), Expect = 5e-53 Identities = 220/257 (85%) Strand = Plus / Plus Query: 134 cgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcgc 193 ||||||||||||| ||||||||||| || |||||||||| ||| | ||||||||||||| Sbjct: 83 cgccgtgcgcggcgtgcaagttcctgcggcgcaagtgcctgccggggtgcgtgttcgcgc 142 Query: 194 cctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgcca 253 |||||||||||||||| | ||||||||||||| |||||||| || |||||||||| Sbjct: 143 cctacttcccgccggaggagccgcagaagttcgccaacgtgcacaaggtgttcggcgcca 202 Query: 254 gcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaact 313 ||||||||||||||||||| |||||||| | ||| ||||||| ||||||||||||| || Sbjct: 203 gcaacgtgaccaagctgctcaacgagctgctgccgcaccagcgggaggacgccgtgagct 262 Query: 314 ccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtaa 373 | ||||||||||||||||| |||| || |||||||||||||||||||||| || | Sbjct: 263 cgctcgcctacgaggccgaggcgcgcgtcaaggaccccgtctacggctgcgtcggcgcca 322 Query: 374 tctccatcctccagcgc 390 ||||| | ||||||||| Sbjct: 323 tctccgtgctccagcgc 339
>gb|DQ327702.1| Hordeum vulgare ramosa 2 gene, partial cds Length = 771 Score = 176 bits (89), Expect = 4e-41 Identities = 215/257 (83%) Strand = Plus / Plus Query: 134 cgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcgc 193 |||||||||| || ||||||||||| || |||||||||| || | |||||||||||||| Sbjct: 77 cgccgtgcgctgcgtgcaagttcctgcggcgcaagtgcctccccggctgcgtgttcgcgc 136 Query: 194 cctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgcca 253 |||||||||||||||| | ||||||||||||| |||||||| || |||||||||| Sbjct: 137 cctacttcccgccggaggagccgcagaagttcgccaacgtgcacaaggtgttcggcgcca 196 Query: 254 gcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaact 313 ||||||||||||||||||| |||||||| | ||| ||||||| || |||||||||| || Sbjct: 197 gcaacgtgaccaagctgctcaacgagctgccgccgcaccagcgggaagacgccgtgagct 256 Query: 314 ccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtaa 373 | || ||||||||||| || ||| || |||||||||||||||||||||| || | Sbjct: 257 cgctggcctacgaggcggaggcgcgggtcaaggaccccgtctacggctgcgtcggcgcca 316 Query: 374 tctccatcctccagcgc 390 ||||| | ||||||||| Sbjct: 317 tctccgtgctccagcgc 333
>ref|XM_463174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 174 bits (88), Expect = 2e-40 Identities = 178/208 (85%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||||||||| | ||| ||||||| |||||||| Sbjct: 64 tgcgtgttcgcgccctacttcccgccggaccagccggccaagttcgccaacgtgcacaag 123 Query: 241 gtcttcggcgccagcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgag 300 || |||||||| ||||||||||| |||||||| ||||| || || ||| | ||||| ||| Sbjct: 124 gtgttcggcgcgagcaacgtgacgaagctgctcaacgacctgcagccggagcagcgggag 183 Query: 301 gacgccgtgaactccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggc 360 |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||| Sbjct: 184 gacgccgtgaactcgctggcgtacgaggccgaggcgcgcctccgcgaccccgtctacggc 243 Query: 361 tgcgtcgccgtaatctccatcctccagc 388 ||||||||| |||||||||||||||| Sbjct: 244 tgcgtcgcctacatctccatcctccagc 271
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 174 bits (88), Expect = 2e-40 Identities = 178/208 (85%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||||||||| | ||| ||||||| |||||||| Sbjct: 22935899 tgcgtgttcgcgccctacttcccgccggaccagccggccaagttcgccaacgtgcacaag 22935958 Query: 241 gtcttcggcgccagcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgag 300 || |||||||| ||||||||||| |||||||| ||||| || || ||| | ||||| ||| Sbjct: 22935959 gtgttcggcgcgagcaacgtgacgaagctgctcaacgacctgcagccggagcagcgggag 22936018 Query: 301 gacgccgtgaactccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggc 360 |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||| Sbjct: 22936019 gacgccgtgaactcgctggcgtacgaggccgaggcgcgcctccgcgaccccgtctacggc 22936078 Query: 361 tgcgtcgccgtaatctccatcctccagc 388 ||||||||| |||||||||||||||| Sbjct: 22936079 tgcgtcgcctacatctccatcctccagc 22936106 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 128 cggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgt 187 ||||||||||||||| ||| ||||||||||| || ||||||||| | | || ||||||| Sbjct: 2704778 cggggtcgccgtgcggggcgtgcaagttcctgcggcgcaagtgcgcggcggagtgcgtgt 2704837 Query: 188 tcgcgccctacttc 201 |||||||||||||| Sbjct: 2704838 tcgcgccctacttc 2704851 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||||||| | | ||||| ||||||| |||| ||| Sbjct: 25557437 tgcgtgttcgcgccctacttcccgccgggcgagccgcacaagttcgccaacgtccacaag 25557496 Query: 241 gtcttcggcgccagcaa 257 ||||||||||||||||| Sbjct: 25557497 gtcttcggcgccagcaa 25557513 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||||||||| Sbjct: 7737986 cgcctccgcgaccccgtctacggctgcgtcgcc 7737954 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 343 cgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||| Sbjct: 2704996 cgcgaccccgtctacggctgcgtcgcc 2705022 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 244 ttcggcgccagcaacgtgaccaagctgct 272 |||||||||||||||||| |||||||||| Sbjct: 7738079 ttcggcgccagcaacgtgtccaagctgct 7738051 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 244 ttcggcgccagcaacgtgaccaagctgct 272 |||||||||||||||||| |||||||||| Sbjct: 2709107 ttcggcgccagcaacgtgtccaagctgct 2709079 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||| |||| |||||||||||| Sbjct: 2709014 cgcctccgcgaccccatctatggctgcgtcgcc 2708982 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 gcgtcgtcgttgccggcgccg 60 ||||||||||||||||||||| Sbjct: 30155567 gcgtcgtcgttgccggcgccg 30155587 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 234 gcaccgcgtcttcggcgccagcaac 258 ||||||||| ||||||||||||||| Sbjct: 9888905 gcaccgcgtgttcggcgccagcaac 9888881 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 135 gccgtgcgcggcctgcaagttcctccgccgcaagtgc 171 |||||||| ||| ||||||||||| || ||||||||| Sbjct: 7738191 gccgtgcggggcgtgcaagttcctgcggcgcaagtgc 7738155
>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete sequence Length = 184783 Score = 174 bits (88), Expect = 2e-40 Identities = 178/208 (85%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||||||||| | ||| ||||||| |||||||| Sbjct: 138429 tgcgtgttcgcgccctacttcccgccggaccagccggccaagttcgccaacgtgcacaag 138488 Query: 241 gtcttcggcgccagcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgag 300 || |||||||| ||||||||||| |||||||| ||||| || || ||| | ||||| ||| Sbjct: 138489 gtgttcggcgcgagcaacgtgacgaagctgctcaacgacctgcagccggagcagcgggag 138548 Query: 301 gacgccgtgaactccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggc 360 |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||| Sbjct: 138549 gacgccgtgaactcgctggcgtacgaggccgaggcgcgcctccgcgaccccgtctacggc 138608 Query: 361 tgcgtcgccgtaatctccatcctccagc 388 ||||||||| |||||||||||||||| Sbjct: 138609 tgcgtcgcctacatctccatcctccagc 138636
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 174 bits (88), Expect = 2e-40 Identities = 178/208 (85%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||||||||| | ||| ||||||| |||||||| Sbjct: 22928927 tgcgtgttcgcgccctacttcccgccggaccagccggccaagttcgccaacgtgcacaag 22928986 Query: 241 gtcttcggcgccagcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgag 300 || |||||||| ||||||||||| |||||||| ||||| || || ||| | ||||| ||| Sbjct: 22928987 gtgttcggcgcgagcaacgtgacgaagctgctcaacgacctgcagccggagcagcgggag 22929046 Query: 301 gacgccgtgaactccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggc 360 |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||| Sbjct: 22929047 gacgccgtgaactcgctggcgtacgaggccgaggcgcgcctccgcgaccccgtctacggc 22929106 Query: 361 tgcgtcgccgtaatctccatcctccagc 388 ||||||||| |||||||||||||||| Sbjct: 22929107 tgcgtcgcctacatctccatcctccagc 22929134 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 128 cggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgt 187 ||||||||||||||| ||| ||||||||||| || ||||||||| | | || ||||||| Sbjct: 2704888 cggggtcgccgtgcggggcgtgcaagttcctgcggcgcaagtgcgcggcggagtgcgtgt 2704947 Query: 188 tcgcgccctacttc 201 |||||||||||||| Sbjct: 2704948 tcgcgccctacttc 2704961 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||||||| | | ||||| ||||||| |||| ||| Sbjct: 25648746 tgcgtgttcgcgccctacttcccgccgggcgagccgcacaagttcgccaacgtccacaag 25648805 Query: 241 gtcttcggcgccagcaa 257 ||||||||||||||||| Sbjct: 25648806 gtcttcggcgccagcaa 25648822 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||||||||| Sbjct: 7735821 cgcctccgcgaccccgtctacggctgcgtcgcc 7735789 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 343 cgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||| Sbjct: 2705106 cgcgaccccgtctacggctgcgtcgcc 2705132 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 244 ttcggcgccagcaacgtgaccaagctgct 272 |||||||||||||||||| |||||||||| Sbjct: 7735914 ttcggcgccagcaacgtgtccaagctgct 7735886 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 244 ttcggcgccagcaacgtgaccaagctgct 272 |||||||||||||||||| |||||||||| Sbjct: 2709217 ttcggcgccagcaacgtgtccaagctgct 2709189 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||| |||| |||||||||||| Sbjct: 2709124 cgcctccgcgaccccatctatggctgcgtcgcc 2709092 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 gcgtcgtcgttgccggcgccg 60 ||||||||||||||||||||| Sbjct: 30246989 gcgtcgtcgttgccggcgccg 30247009 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 234 gcaccgcgtcttcggcgccagcaac 258 ||||||||| ||||||||||||||| Sbjct: 9887026 gcaccgcgtgttcggcgccagcaac 9887002 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 135 gccgtgcgcggcctgcaagttcctccgccgcaagtgc 171 |||||||| ||| ||||||||||| || ||||||||| Sbjct: 7736026 gccgtgcggggcgtgcaagttcctgcggcgcaagtgc 7735990
>ref|XM_462810.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1324 Score = 163 bits (82), Expect = 6e-37 Identities = 214/258 (82%) Strand = Plus / Plus Query: 133 tcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcg 192 |||||||||||||| ||||||||||| || || ||||||| ||| | |||||||||||| Sbjct: 380 tcgccgtgcgcggcgtgcaagttcctgcggcggaagtgcctgccgggctgcgtgttcgct 439 Query: 193 ccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgcc 252 || |||||||||||||| | ||||||||||||| |||| ||| || ||||||||| Sbjct: 440 ccttacttcccgccggaggagccgcagaagttcgccaacgtccacaaggtgttcggcgcc 499 Query: 253 agcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaac 312 || ||||| |||||||| || |||||||| | ||| ||||||| ||||||||||||| | Sbjct: 500 agtaacgtcaccaagctcctcaacgagctgctgccgcaccagcgggaggacgccgtgagc 559 Query: 313 tccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgta 372 || ||||| ||||||||||| ||| || |||||||||||||||||||||| || Sbjct: 560 tcgctcgcgtacgaggccgaggcccgcgtcaaggaccccgtctacggctgcgtcggcgcc 619 Query: 373 atctccatcctccagcgc 390 |||||| ||||||||||| Sbjct: 620 atctccgtcctccagcgc 637
>dbj|AB200238.1| Oryza sativa (japonica cultivar-group) CRLL4 mRNA for LOB domain protein, complete cds Length = 756 Score = 163 bits (82), Expect = 6e-37 Identities = 214/258 (82%) Strand = Plus / Plus Query: 133 tcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcg 192 |||||||||||||| ||||||||||| || || ||||||| ||| | |||||||||||| Sbjct: 85 tcgccgtgcgcggcgtgcaagttcctgcggcggaagtgcctgccgggctgcgtgttcgct 144 Query: 193 ccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgcc 252 || |||||||||||||| | ||||||||||||| |||| ||| || ||||||||| Sbjct: 145 ccttacttcccgccggaggagccgcagaagttcgccaacgtccacaaggtgttcggcgcc 204 Query: 253 agcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaac 312 || ||||| |||||||| || |||||||| | ||| ||||||| ||||||||||||| | Sbjct: 205 agtaacgtcaccaagctcctcaacgagctgctgccgcaccagcgggaggacgccgtgagc 264 Query: 313 tccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgta 372 || ||||| ||||||||||| ||| || |||||||||||||||||||||| || Sbjct: 265 tcgctcgcgtacgaggccgaggcccgcgtcaaggaccccgtctacggctgcgtcggcgcc 324 Query: 373 atctccatcctccagcgc 390 |||||| ||||||||||| Sbjct: 325 atctccgtcctccagcgc 342
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 163 bits (82), Expect = 6e-37 Identities = 214/258 (82%) Strand = Plus / Minus Query: 133 tcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcg 192 |||||||||||||| ||||||||||| || || ||||||| ||| | |||||||||||| Sbjct: 119168 tcgccgtgcgcggcgtgcaagttcctgcggcggaagtgcctgccgggctgcgtgttcgct 119109 Query: 193 ccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgcc 252 || |||||||||||||| | ||||||||||||| |||| ||| || ||||||||| Sbjct: 119108 ccttacttcccgccggaggagccgcagaagttcgccaacgtccacaaggtgttcggcgcc 119049 Query: 253 agcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaac 312 || ||||| |||||||| || |||||||| | ||| ||||||| ||||||||||||| | Sbjct: 119048 agtaacgtcaccaagctcctcaacgagctgctgccgcaccagcgggaggacgccgtgagc 118989 Query: 313 tccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgta 372 || ||||| ||||||||||| ||| || |||||||||||||||||||||| || Sbjct: 118988 tcgctcgcgtacgaggccgaggcccgcgtcaaggaccccgtctacggctgcgtcggcgcc 118929 Query: 373 atctccatcctccagcgc 390 |||||| ||||||||||| Sbjct: 118928 atctccgtcctccagcgc 118911
>dbj|AK105527.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G05, full insert sequence Length = 1324 Score = 163 bits (82), Expect = 6e-37 Identities = 214/258 (82%) Strand = Plus / Plus Query: 133 tcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcg 192 |||||||||||||| ||||||||||| || || ||||||| ||| | |||||||||||| Sbjct: 380 tcgccgtgcgcggcgtgcaagttcctgcggcggaagtgcctgccgggctgcgtgttcgct 439 Query: 193 ccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgcc 252 || |||||||||||||| | ||||||||||||| |||| ||| || ||||||||| Sbjct: 440 ccttacttcccgccggaggagccgcagaagttcgccaacgtccacaaggtgttcggcgcc 499 Query: 253 agcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaac 312 || ||||| |||||||| || |||||||| | ||| ||||||| ||||||||||||| | Sbjct: 500 agtaacgtcaccaagctcctcaacgagctgctgccgcaccagcgggaggacgccgtgagc 559 Query: 313 tccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgta 372 || ||||| ||||||||||| ||| || |||||||||||||||||||||| || Sbjct: 560 tcgctcgcgtacgaggccgaggcccgcgtcaaggaccccgtctacggctgcgtcggcgcc 619 Query: 373 atctccatcctccagcgc 390 |||||| ||||||||||| Sbjct: 620 atctccgtcctccagcgc 637
>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028E10 Length = 140791 Score = 163 bits (82), Expect = 6e-37 Identities = 214/258 (82%) Strand = Plus / Minus Query: 133 tcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgttcgcg 192 |||||||||||||| ||||||||||| || || ||||||| ||| | |||||||||||| Sbjct: 137860 tcgccgtgcgcggcgtgcaagttcctgcggcggaagtgcctgccgggctgcgtgttcgct 137801 Query: 193 ccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgcgtcttcggcgcc 252 || |||||||||||||| | ||||||||||||| |||| ||| || ||||||||| Sbjct: 137800 ccttacttcccgccggaggagccgcagaagttcgccaacgtccacaaggtgttcggcgcc 137741 Query: 253 agcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaac 312 || ||||| |||||||| || |||||||| | ||| ||||||| ||||||||||||| | Sbjct: 137740 agtaacgtcaccaagctcctcaacgagctgctgccgcaccagcgggaggacgccgtgagc 137681 Query: 313 tccctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgta 372 || ||||| ||||||||||| ||| || |||||||||||||||||||||| || Sbjct: 137680 tcgctcgcgtacgaggccgaggcccgcgtcaaggaccccgtctacggctgcgtcggcgcc 137621 Query: 373 atctccatcctccagcgc 390 |||||| ||||||||||| Sbjct: 137620 atctccgtcctccagcgc 137603
>ref|NM_105235.3| Arabidopsis thaliana AS2 (ASYMMETRIC LEAVES 2) AT1G65620 (AS2) mRNA, complete cds Length = 1055 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 256 aacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaactcc 315 |||||||| ||||| || |||||||| ||||| | || || || ||||| |||||||| Sbjct: 376 aacgtgacaaagctcctcaacgagcttcacccttcacaacgtgaagacgcagtgaactct 435 Query: 316 ctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtaatc 375 | ||||| || ||||||||||||||||| ||||| |||||||||||||||| ||| ||| Sbjct: 436 ttggcctatgaagccgacatgcgcctccgtgaccctgtctacggctgcgtcggcgtcatc 495 Query: 376 tccatcctcca 386 || ||||||| Sbjct: 496 tctctcctcca 506
>gb|AY519483.1| Arabidopsis thaliana ecotype Blanes AS2 (At1G65620) gene, complete cds Length = 748 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 256 aacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaactcc 315 |||||||| ||||| || |||||||| ||||| | || || || ||||| |||||||| Sbjct: 210 aacgtgacaaagctcctcaacgagcttcacccttcacaacgtgaagacgcagtgaactct 269 Query: 316 ctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtaatc 375 | ||||| || ||||||||||||||||| ||||| |||||||||||||||| ||| ||| Sbjct: 270 ttggcctatgaagccgacatgcgcctccgtgaccctgtctacggctgcgtcggcgtcatc 329 Query: 376 tccatcctcca 386 || ||||||| Sbjct: 330 tctctcctcca 340
>gb|BT025163.1| Arabidopsis thaliana At1g65620 mRNA, complete cds Length = 600 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 256 aacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaactcc 315 |||||||| ||||| || |||||||| ||||| | || || || ||||| |||||||| Sbjct: 145 aacgtgacaaagctcctcaacgagcttcacccttcacaacgtgaagacgcagtgaactct 204 Query: 316 ctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtaatc 375 | ||||| || ||||||||||||||||| ||||| |||||||||||||||| ||| ||| Sbjct: 205 ttggcctatgaagccgacatgcgcctccgtgaccctgtctacggctgcgtcggcgtcatc 264 Query: 376 tccatcctcca 386 || ||||||| Sbjct: 265 tctctcctcca 275
>gb|AF447887.1| Arabidopsis thaliana LOB DOMAIN 6 (LBD6) mRNA, complete cds Length = 980 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 256 aacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaactcc 315 |||||||| ||||| || |||||||| ||||| | || || || ||||| |||||||| Sbjct: 312 aacgtgacaaagctcctcaacgagcttcacccttcacaacgtgaagacgcagtgaactct 371 Query: 316 ctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtaatc 375 | ||||| || ||||||||||||||||| ||||| |||||||||||||||| ||| ||| Sbjct: 372 ttggcctatgaagccgacatgcgcctccgtgaccctgtctacggctgcgtcggcgtcatc 431 Query: 376 tccatcctcca 386 || ||||||| Sbjct: 432 tctctcctcca 442
>gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete sequence Length = 109560 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 256 aacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaactcc 315 |||||||| ||||| || |||||||| ||||| | || || || ||||| |||||||| Sbjct: 79360 aacgtgacaaagctcctcaacgagcttcacccttcacaacgtgaagacgcagtgaactct 79419 Query: 316 ctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtaatc 375 | ||||| || ||||||||||||||||| ||||| |||||||||||||||| ||| ||| Sbjct: 79420 ttggcctatgaagccgacatgcgcctccgtgaccctgtctacggctgcgtcggcgtcatc 79479 Query: 376 tccatcctcca 386 || ||||||| Sbjct: 79480 tctctcctcca 79490
>dbj|AB080802.1| Arabidopsis thaliana AS2 mRNA for ASYMMETRIC LEAVES2, complete cds Length = 1055 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 256 aacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaactcc 315 |||||||| ||||| || |||||||| ||||| | || || || ||||| |||||||| Sbjct: 376 aacgtgacaaagctcctcaacgagcttcacccttcacaacgtgaagacgcagtgaactct 435 Query: 316 ctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccgtaatc 375 | ||||| || ||||||||||||||||| ||||| |||||||||||||||| ||| ||| Sbjct: 436 ttggcctatgaagccgacatgcgcctccgtgaccctgtctacggctgcgtcggcgtcatc 495 Query: 376 tccatcctcca 386 || ||||||| Sbjct: 496 tctctcctcca 506
>ref|XM_470234.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 543 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 128 cggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgt 187 ||||||||||||||| ||| ||||||||||| || ||||||||| | | || ||||||| Sbjct: 29 cggggtcgccgtgcggggcgtgcaagttcctgcggcgcaagtgcgcggcggagtgcgtgt 88 Query: 188 tcgcgccctacttc 201 |||||||||||||| Sbjct: 89 tcgcgccctacttc 102 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 343 cgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||| Sbjct: 247 cgcgaccccgtctacggctgcgtcgcc 273
>dbj|AB200235.1| Oryza sativa (japonica cultivar-group) CRLL1 mRNA for LOB domain protein, complete cds Length = 558 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 128 cggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgt 187 ||||||||||||||| ||| ||||||||||| || ||||||||| | | || ||||||| Sbjct: 29 cggggtcgccgtgcggggcgtgcaagttcctgcggcgcaagtgcgcggcggagtgcgtgt 88 Query: 188 tcgcgccctacttc 201 |||||||||||||| Sbjct: 89 tcgcgccctacttc 102 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 343 cgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||| Sbjct: 247 cgcgaccccgtctacggctgcgtcgcc 273
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 128 cggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgt 187 ||||||||||||||| ||| ||||||||||| || ||||||||| | | || ||||||| Sbjct: 49697 cggggtcgccgtgcggggcgtgcaagttcctgcggcgcaagtgcgcggcggagtgcgtgt 49756 Query: 188 tcgcgccctacttc 201 |||||||||||||| Sbjct: 49757 tcgcgccctacttc 49770 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 343 cgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||| Sbjct: 49915 cgcgaccccgtctacggctgcgtcgcc 49941 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 244 ttcggcgccagcaacgtgaccaagctgct 272 |||||||||||||||||| |||||||||| Sbjct: 54026 ttcggcgccagcaacgtgtccaagctgct 53998 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||| |||| |||||||||||| Sbjct: 53933 cgcctccgcgaccccatctatggctgcgtcgcc 53901
>dbj|AK107949.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-B09, full insert sequence Length = 722 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 128 cggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtgt 187 ||||||||||||||| ||| ||||||||||| || ||||||||| | | || ||||||| Sbjct: 65 cggggtcgccgtgcggggcgtgcaagttcctgcggcgcaagtgcgcggcggagtgcgtgt 124 Query: 188 tcgcgccctacttc 201 |||||||||||||| Sbjct: 125 tcgcgccctacttc 138 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 343 cgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||| Sbjct: 283 cgcgaccccgtctacggctgcgtcgcc 309
>ref|NM_194979.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0042K08.9), mRNA Length = 810 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||||||||| Sbjct: 301 cgcctccgcgaccccgtctacggctgcgtcgcc 333 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 244 ttcggcgccagcaacgtgaccaagctgctg 273 |||||||||||||||||| ||||||||||| Sbjct: 208 ttcggcgccagcaacgtgtccaagctgctg 237
>ref|XM_469116.1| Oryza sativa (japonica cultivar-group), mRNA Length = 645 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||||||| | | ||||| ||||||| |||| ||| Sbjct: 166 tgcgtgttcgcgccctacttcccgccgggcgagccgcacaagttcgccaacgtccacaag 225 Query: 241 gtcttcggcgccagcaa 257 ||||||||||||||||| Sbjct: 226 gtcttcggcgccagcaa 242
>gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0042K08, complete sequence Length = 117839 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||||||||| Sbjct: 86904 cgcctccgcgaccccgtctacggctgcgtcgcc 86872 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 244 ttcggcgccagcaacgtgaccaagctgctg 273 |||||||||||||||||| ||||||||||| Sbjct: 86997 ttcggcgccagcaacgtgtccaagctgctg 86968
>gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genomic sequence, complete sequence Length = 167427 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||||||| | | ||||| ||||||| |||| ||| Sbjct: 144914 tgcgtgttcgcgccctacttcccgccgggcgagccgcacaagttcgccaacgtccacaag 144855 Query: 241 gtcttcggcgccagcaa 257 ||||||||||||||||| Sbjct: 144854 gtcttcggcgccagcaa 144838
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||||||||| Sbjct: 3972136 cgcctccgcgaccccgtctacggctgcgtcgcc 3972104 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 244 ttcggcgccagcaacgtgaccaagctgctg 273 |||||||||||||||||| ||||||||||| Sbjct: 3972229 ttcggcgccagcaacgtgtccaagctgctg 3972200 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 28 gcctcgtcgtcggcgtcgtcgttgcc 53 |||||||||||| ||||||||||||| Sbjct: 12921505 gcctcgtcgtcgtcgtcgtcgttgcc 12921480 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcg 48 |||||||||||||||||||| Sbjct: 18956110 cctcgtcgtcggcgtcgtcg 18956091 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcgttgc 52 ||||||||||| |||||||||||| Sbjct: 15592895 cctcgtcgtcgtcgtcgtcgttgc 15592872
>dbj|AB200236.1| Oryza sativa (japonica cultivar-group) CRLL2 mRNA for LOB domain protein, complete cds Length = 810 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||||||||| Sbjct: 301 cgcctccgcgaccccgtctacggctgcgtcgcc 333 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 244 ttcggcgccagcaacgtgaccaagctgctg 273 |||||||||||||||||| ||||||||||| Sbjct: 208 ttcggcgccagcaacgtgtccaagctgctg 237
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||||||||| Sbjct: 3972057 cgcctccgcgaccccgtctacggctgcgtcgcc 3972025 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 244 ttcggcgccagcaacgtgaccaagctgctg 273 |||||||||||||||||| ||||||||||| Sbjct: 3972150 ttcggcgccagcaacgtgtccaagctgctg 3972121 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 28 gcctcgtcgtcggcgtcgtcgttgcc 53 |||||||||||| ||||||||||||| Sbjct: 12928845 gcctcgtcgtcgtcgtcgtcgttgcc 12928820 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcg 48 |||||||||||||||||||| Sbjct: 18967340 cctcgtcgtcggcgtcgtcg 18967321 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcgttgc 52 ||||||||||| |||||||||||| Sbjct: 15601136 cctcgtcgtcgtcgtcgtcgttgc 15601113
>gb|AC174464.1| Oryza sativa (japonica cultivar-group) chromosome 10 BAC clone OSJNBb0094D21, complete sequence Length = 127821 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||||||||| Sbjct: 26062 cgcctccgcgaccccgtctacggctgcgtcgcc 26030 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 244 ttcggcgccagcaacgtgaccaagctgctg 273 |||||||||||||||||| ||||||||||| Sbjct: 26155 ttcggcgccagcaacgtgtccaagctgctg 26126
>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||||||||| Sbjct: 114808 cgcctccgcgaccccgtctacggctgcgtcgcc 114840 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 244 ttcggcgccagcaacgtgaccaagctgct 272 |||||||||||||||||| |||||||||| Sbjct: 114715 ttcggcgccagcaacgtgtccaagctgct 114743 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 135 gccgtgcgcggcctgcaagttcctccgccgcaagtgc 171 |||||||| ||| ||||||||||| || ||||||||| Sbjct: 114603 gccgtgcggggcgtgcaagttcctgcggcgcaagtgc 114639
>gb|BT009057.1| Triticum aestivum clone wdr1f.pk002.l10:fis, full insert mRNA sequence Length = 852 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 127 acggggtcgccgtgcgcggcctgcaagttcctccgccgcaagtgccagcctgactgcgtg 186 |||||||||||||||| ||| ||||||||||| || ||| |||| | | || |||||| Sbjct: 104 acggggtcgccgtgcggggcgtgcaagttcctgcggcgccggtgcgcggcggagtgcgtg 163 Query: 187 ttcgcgccctacttc 201 ||||||||||||||| Sbjct: 164 ttcgcgccctacttc 178 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 343 cgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||||||||||||| Sbjct: 323 cgcgaccccgtctacggctgcgtcgcc 349
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 346 gaccccgtctacggctgcgtcgccgtaatctccatcctccag 387 ||||||||||||||||||||||||| |||||| |||||||| Sbjct: 330332 gaccccgtctacggctgcgtcgccgccatctccttcctccag 330373 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||| |||| | ||||| ||||| |||||||| Sbjct: 330167 tgcgtgttcgcgccctacttcccggcggaggaggcgcagcggttcgccatggtgcaccgg 330226 Query: 241 gtcttcggcgccagcaacgtgaccaagctgctg 273 || ||||||||||||||||| | |||| ||||| Sbjct: 330227 gtgttcggcgccagcaacgtcagcaagatgctg 330259 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 gtcggcgtcgtcgttgccggcg 57 |||||||||||||||||||||| Sbjct: 5507086 gtcggcgtcgtcgttgccggcg 5507107
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 346 gaccccgtctacggctgcgtcgccgtaatctccatcctccag 387 ||||||||||||||||||||||||| |||||| |||||||| Sbjct: 313934 gaccccgtctacggctgcgtcgccgccatctccttcctccag 313975 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||| |||| | ||||| ||||| |||||||| Sbjct: 313769 tgcgtgttcgcgccctacttcccggcggaggaggcgcagcggttcgccatggtgcaccgg 313828 Query: 241 gtcttcggcgccagcaacgtgaccaagctgctg 273 || ||||||||||||||||| | |||| ||||| Sbjct: 313829 gtgttcggcgccagcaacgtcagcaagatgctg 313861
>dbj|AK109211.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-D02, full insert sequence Length = 693 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 346 gaccccgtctacggctgcgtcgccgtaatctccatcctccag 387 ||||||||||||||||||||||||| |||||| |||||||| Sbjct: 310 gaccccgtctacggctgcgtcgccgccatctccttcctccag 351 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||| |||| | ||||| ||||| |||||||| Sbjct: 145 tgcgtgttcgcgccctacttcccggcggaggaggcgcagcggttcgccatggtgcaccgg 204 Query: 241 gtcttcggcgccagcaacgtgaccaagctgctg 273 || ||||||||||||||||| | |||| ||||| Sbjct: 205 gtgttcggcgccagcaacgtcagcaagatgctg 237
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 346 gaccccgtctacggctgcgtcgccgtaatctccatcctccag 387 ||||||||||||||||||||||||| |||||| |||||||| Sbjct: 313934 gaccccgtctacggctgcgtcgccgccatctccttcctccag 313975 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||| |||| | ||||| ||||| |||||||| Sbjct: 313769 tgcgtgttcgcgccctacttcccggcggaggaggcgcagcggttcgccatggtgcaccgg 313828 Query: 241 gtcttcggcgccagcaacgtgaccaagctgctg 273 || ||||||||||||||||| | |||| ||||| Sbjct: 313829 gtgttcggcgccagcaacgtcagcaagatgctg 313861
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 346 gaccccgtctacggctgcgtcgccgtaatctccatcctccag 387 ||||||||||||||||||||||||| |||||| |||||||| Sbjct: 330332 gaccccgtctacggctgcgtcgccgccatctccttcctccag 330373 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||| |||| | ||||| ||||| |||||||| Sbjct: 330167 tgcgtgttcgcgccctacttcccggcggaggaggcgcagcggttcgccatggtgcaccgg 330226 Query: 241 gtcttcggcgccagcaacgtgaccaagctgctg 273 || ||||||||||||||||| | |||| ||||| Sbjct: 330227 gtgttcggcgccagcaacgtcagcaagatgctg 330259 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 gtcggcgtcgtcgttgccggcg 57 |||||||||||||||||||||| Sbjct: 5507075 gtcggcgtcgtcgttgccggcg 5507096
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 346 gaccccgtctacggctgcgtcgccgtaatctccatcctccag 387 ||||||||||||||||||||||||| |||||| |||||||| Sbjct: 63383 gaccccgtctacggctgcgtcgccgccatctccttcctccag 63424 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||| |||| | ||||| ||||| |||||||| Sbjct: 63218 tgcgtgttcgcgccctacttcccggcggaggaggcgcagcggttcgccatggtgcaccgg 63277 Query: 241 gtcttcggcgccagcaacgtgaccaagctgctg 273 || ||||||||||||||||| | |||| ||||| Sbjct: 63278 gtgttcggcgccagcaacgtcagcaagatgctg 63310
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 346 gaccccgtctacggctgcgtcgccgtaatctccatcctccag 387 ||||||||||||||||||||||||| |||||| |||||||| Sbjct: 21252 gaccccgtctacggctgcgtcgccgccatctccttcctccag 21293 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtgcacgtgcaccgc 240 |||||||||||||||||||||||| |||| | ||||| ||||| |||||||| Sbjct: 21087 tgcgtgttcgcgccctacttcccggcggaggaggcgcagcggttcgccatggtgcaccgg 21146 Query: 241 gtcttcggcgccagcaacgtgaccaagctgctg 273 || ||||||||||||||||| | |||| ||||| Sbjct: 21147 gtgttcggcgccagcaacgtcagcaagatgctg 21179
>ref|XM_468436.1| Oryza sativa (japonica cultivar-group), mRNA Length = 931 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 340 ctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||| |||||||||||| Sbjct: 370 ctccgcgaccccgtctatggctgcgtcgcc 399 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttc 201 ||||||||||||||||||||| Sbjct: 208 tgcgtgttcgcgccctacttc 228
>ref|XM_507056.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1202_E07.33 mRNA Length = 1002 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 340 ctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||| |||||||||||| Sbjct: 377 ctccgcgaccccgtctatggctgcgtcgcc 406 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttc 201 ||||||||||||||||||||| Sbjct: 215 tgcgtgttcgcgccctacttc 235
>gb|AY790250.1| Lotus corniculatus var. japonicus lateral organ boundaries-like 3 (LOB3) mRNA, partial cds Length = 779 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 253 agcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaac 312 |||||||| |||||||| || || ||||||| ||| | ||| | |||||||| || ||| Sbjct: 115 agcaacgttaccaagcttctcaatgagctcctccctcatcagagggaggacgcagtaaac 174 Query: 313 tccctcgcctacga 326 |||||||||||||| Sbjct: 175 tccctcgcctacga 188
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 340 ctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||| |||||||||||| Sbjct: 35246727 ctccgcgaccccgtctatggctgcgtcgcc 35246698 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 tgcgtgttcgcgccctacttc 201 ||||||||||||||||||||| Sbjct: 35246889 tgcgtgttcgcgccctacttc 35246869 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 27 ggcctcgtcgtcggcgtcgtcgttgccg 54 ||||||||||||| ||||||||| |||| Sbjct: 35280216 ggcctcgtcgtcgtcgtcgtcgtcgccg 35280243 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcgtcggcgtcgtcgttgccggcg 57 |||||| ||||||||||||||||| Sbjct: 31885480 tcgtcgtcgtcgtcgttgccggcg 31885457
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 340 ctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||| |||||||||||| Sbjct: 58777 ctccgcgaccccgtctatggctgcgtcgcc 58748 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 tgcgtgttcgcgccctacttc 201 ||||||||||||||||||||| Sbjct: 58939 tgcgtgttcgcgccctacttc 58919 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 27 ggcctcgtcgtcggcgtcgtcgttgccg 54 ||||||||||||| ||||||||| |||| Sbjct: 92266 ggcctcgtcgtcgtcgtcgtcgtcgccg 92293
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 340 ctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||| |||||||||||| Sbjct: 142083 ctccgcgaccccgtctatggctgcgtcgcc 142054 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 tgcgtgttcgcgccctacttc 201 ||||||||||||||||||||| Sbjct: 142245 tgcgtgttcgcgccctacttc 142225
>dbj|AK064187.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-C02, full insert sequence Length = 1002 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 340 ctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||||| |||||||||||| Sbjct: 377 ctccgcgaccccgtctatggctgcgtcgcc 406 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttc 201 ||||||||||||||||||||| Sbjct: 215 tgcgtgttcgcgccctacttc 235
>dbj|AP006365.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT31H17, TM0171, complete sequence Length = 126380 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 253 agcaacgtgaccaagctgctgaacgagctccacccgtaccagcgcgaggacgccgtgaac 312 |||||||| |||||||| || || ||||||| ||| | ||| | |||||||| || ||| Sbjct: 96339 agcaacgttaccaagcttctcaatgagctcctccctcatcagagggaggacgcagtaaac 96280 Query: 313 tccctcgcctacga 326 |||||||||||||| Sbjct: 96279 tccctcgcctacga 96266
>ref|XM_470235.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 864 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||| |||| |||||||||||| Sbjct: 223 cgcctccgcgaccccatctatggctgcgtcgcc 255 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 244 ttcggcgccagcaacgtgaccaagctgct 272 |||||||||||||||||| |||||||||| Sbjct: 130 ttcggcgccagcaacgtgtccaagctgct 158
>gb|AY736375.1| Oryza sativa (japonica cultivar-group) adventitious rootless1 (ARL1) mRNA, complete cds Length = 780 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||| |||| |||||||||||| Sbjct: 223 cgcctccgcgaccccatctatggctgcgtcgcc 255 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 244 ttcggcgccagcaacgtgaccaagctgct 272 |||||||||||||||||| |||||||||| Sbjct: 130 ttcggcgccagcaacgtgtccaagctgct 158
>gb|AC079021.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0008A07, complete sequence Length = 135809 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 234 gcaccgcgtcttcggcgccagcaac 258 ||||||||||||||||||||||||| Sbjct: 1583 gcaccgcgtcttcggcgccagcaac 1559
>dbj|AB200234.1| Oryza sativa (japonica cultivar-group) CRL1 mRNA for LOB domain protein, complete cds Length = 780 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 337 cgcctccgcgaccccgtctacggctgcgtcgcc 369 ||||||||||||||| |||| |||||||||||| Sbjct: 223 cgcctccgcgaccccatctatggctgcgtcgcc 255 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 244 ttcggcgccagcaacgtgaccaagctgct 272 |||||||||||||||||| |||||||||| Sbjct: 130 ttcggcgccagcaacgtgtccaagctgct 158
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 234 gcaccgcgtcttcggcgccagcaac 258 ||||||||||||||||||||||||| Sbjct: 57056 gcaccgcgtcttcggcgccagcaac 57032
>ref|NM_079505.2| Drosophila melanogaster Germ line transcription factor 1 CG1119-RA, transcript variant A (Gnf1), mRNA Length = 3204 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 249 cgccagcaacgtgaccaagctgctgaac 276 |||||||||||||||||||||| ||||| Sbjct: 1411 cgccagcaacgtgaccaagctgatgaac 1438
>gb|BT003618.1| Drosophila melanogaster GH06471 full insert cDNA Length = 4119 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 249 cgccagcaacgtgaccaagctgctgaac 276 |||||||||||||||||||||| ||||| Sbjct: 2305 cgccagcaacgtgaccaagctgatgaac 2332
>gb|U97685.1|DMU97685 Drosophila melanogaster replication factor C large subunit (Gnf1) mRNA, complete cds Length = 2961 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 249 cgccagcaacgtgaccaagctgctgaac 276 |||||||||||||||||||||| ||||| Sbjct: 1323 cgccagcaacgtgaccaagctgatgaac 1350
>gb|AC152495.1| Zea mays BAC clone Z486N13, complete sequence Length = 169348 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttccc 203 ||||||||||||||||||||||| Sbjct: 3292 tgcgtgttcgcgccctacttccc 3314
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 46.1 bits (23), Expect = 0.095 Identities = 38/43 (88%) Strand = Plus / Minus Query: 231 cgtgcaccgcgtcttcggcgccagcaacgtgaccaagctgctg 273 ||||||| | || |||||||||||||||||| | ||||||||| Sbjct: 49713 cgtgcacagggtgttcggcgccagcaacgtggcgaagctgctg 49671
>gb|AY111610.1| Zea mays CL34485_1 mRNA sequence Length = 607 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttccc 203 ||||||||||||||||||||||| Sbjct: 384 tgcgtgttcgcgccctacttccc 406
>ref|NM_189019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 366 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 cgtgcaccgcgtcttcggcgccagcaacgt 260 ||||||| | |||||||||||||||||||| Sbjct: 312 cgtgcacagggtcttcggcgccagcaacgt 341
>ref|NM_191430.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1125 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 244 ttcggcgccagcaacgtgaccaagctgctg 273 |||||||||||||||||| | ||||||||| Sbjct: 556 ttcggcgccagcaacgtggcgaagctgctg 585
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 26 tggcctcgtcgtcggcgtcgtcgttgccggcgcc 59 |||||||||||||| ||||||| | ||||||||| Sbjct: 74967 tggcctcgtcgtcgtcgtcgtcctcgccggcgcc 75000 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 gaccccgtctacggctgcgtcg 367 |||||||||||||||||||||| Sbjct: 39758 gaccccgtctacggctgcgtcg 39737
>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0052F16, complete sequence Length = 162082 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 26 tggcctcgtcgtcggcgtcgtcgttgccggcgcc 59 |||||||||||||| ||||||| | ||||||||| Sbjct: 18963 tggcctcgtcgtcgtcgtcgtcctcgccggcgcc 18996
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 28 gcctcgtcgtcggcgtcgtcgttgcc 53 |||||||||||| ||||||||||||| Sbjct: 20421 gcctcgtcgtcgtcgtcgtcgttgcc 20396
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 33 gtcgtcggcgtcgtcgttgccggcgc 58 ||||||||||||||||| |||||||| Sbjct: 102346 gtcgtcggcgtcgtcgtcgccggcgc 102371
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 gcctcgtcgtcggcgtcgtcgt 49 |||||||||||||||||||||| Sbjct: 351669 gcctcgtcgtcggcgtcgtcgt 351648
>gb|AF291748.1|AF291748 Zea mays high mobility group I/Y-2 mRNA, complete cds Length = 1084 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 31 tcgtcgtcggcgtcgtcgttgc 52 |||||||||||||||||||||| Sbjct: 812 tcgtcgtcggcgtcgtcgttgc 833
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 cgtgcaccgcgtcttcggcgccagcaacgt 260 ||||||| | |||||||||||||||||||| Sbjct: 25644171 cgtgcacagggtcttcggcgccagcaacgt 25644200 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcgt 49 ||||||||||||||||||||| Sbjct: 22976664 cctcgtcgtcggcgtcgtcgt 22976644 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 tgcaccgcgtcttcggcgccagca 256 ||||||||||| |||||||||||| Sbjct: 22540308 tgcaccgcgtcatcggcgccagca 22540285 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gtcggcgtcgtcgttgccgg 55 |||||||||||||||||||| Sbjct: 13059933 gtcggcgtcgtcgttgccgg 13059952
>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 117585 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 gtcggcgtcgtcgttgccggcg 57 |||||||||||||||||||||| Sbjct: 91067 gtcggcgtcgtcgttgccggcg 91046
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 cgtgcaccgcgtcttcggcgccagcaacgt 260 ||||||| | |||||||||||||||||||| Sbjct: 130862 cgtgcacagggtcttcggcgccagcaacgt 130891
>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0700D12 Length = 145177 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 cgtgcaccgcgtcttcggcgccagcaacgt 260 ||||||| | |||||||||||||||||||| Sbjct: 21919 cgtgcacagggtcttcggcgccagcaacgt 21948
>dbj|AK112071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-E04, full insert sequence Length = 626 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 cgtgcaccgcgtcttcggcgccagcaacgt 260 ||||||| | |||||||||||||||||||| Sbjct: 398 cgtgcacagggtcttcggcgccagcaacgt 427
>dbj|AK106384.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E04, full insert sequence Length = 1236 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 26 tggcctcgtcgtcggcgtcgtcgttgccggcgcc 59 |||||||||||||| ||||||| | ||||||||| Sbjct: 826 tggcctcgtcgtcgtcgtcgtcctcgccggcgcc 793
>dbj|AK103441.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129D12, full insert sequence Length = 930 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 344 gcgaccccgtctacggctgcgtcgcc 369 ||||||||||||| |||||||||||| Sbjct: 373 gcgaccccgtctatggctgcgtcgcc 398 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgcgtgttcgcgccctacttc 201 ||||||||||||||||||||| Sbjct: 207 tgcgtgttcgcgccctacttc 227
>ref|NM_210066.1| Eremothecium gossypii AEL148Wp (AEL148W), mRNA Length = 1722 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 gcctcgtcgtcggcgtcgtcgt 49 |||||||||||||||||||||| Sbjct: 581 gcctcgtcgtcggcgtcgtcgt 560
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160556 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 gtcggcgtcgtcgttgccggcg 57 |||||||||||||||||||||| Sbjct: 59891 gtcggcgtcgtcgttgccggcg 59912
>ref|XM_482854.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1565 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcgt 49 ||||||||||||||||||||| Sbjct: 676 cctcgtcgtcggcgtcgtcgt 656
>gb|AY022848.1| Oryza sativa microsatellite MRG5173 containing (CGG)X8, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 135 gccgtgcgcggcctgcaagttcctccgccgcaagtgc 171 |||||||| ||| ||||||||||| || ||||||||| Sbjct: 176 gccgtgcggggcgtgcaagttcctgcggcgcaagtgc 212
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 gcgtcgtcgttgccggcgccg 60 ||||||||||||||||||||| Sbjct: 68328 gcgtcgtcgttgccggcgccg 68308
>ref|XM_860432.1| PREDICTED: Canis familiaris similar to arrestin domain containing 2 isoform 2, transcript variant 3 (LOC609489), mRNA Length = 1335 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 396 ccgccagctccagcaggacctcgcccgcg 424 |||||||||||||||||||| ||||||| Sbjct: 229 ccgccagctccagcaggacccggcccgcg 201
>ref|XM_860412.1| PREDICTED: Canis familiaris similar to arrestin domain containing 2 isoform 2, transcript variant 2 (LOC609489), mRNA Length = 1224 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 396 ccgccagctccagcaggacctcgcccgcg 424 |||||||||||||||||||| ||||||| Sbjct: 118 ccgccagctccagcaggacccggcccgcg 90
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ggcctcgtcgtcggcgtcgtcgttg 51 |||||||||| |||||||||||||| Sbjct: 220759 ggcctcgtcggcggcgtcgtcgttg 220735
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 ccatcctccagcgcaacctcc 397 ||||||||||||||||||||| Sbjct: 1851563 ccatcctccagcgcaacctcc 1851543
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 gccagctccagcaggacctcg 418 ||||||||||||||||||||| Sbjct: 2134677 gccagctccagcaggacctcg 2134657 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 cgtcgtcggcgtcgtcgttg 51 |||||||||||||||||||| Sbjct: 778490 cgtcgtcggcgtcgtcgttg 778509
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 cggcgtcgtcgttgccggcgc 58 ||||||||||||||||||||| Sbjct: 20312482 cggcgtcgtcgttgccggcgc 20312462
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 234 gcaccgcgtcttcggcgccagcaac 258 ||||||||| ||||||||||||||| Sbjct: 51294 gcaccgcgtgttcggcgccagcaac 51270
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 gcgccgggcggatcggtgatc 75 ||||||||||||||||||||| Sbjct: 5036059 gcgccgggcggatcggtgatc 5036039
>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0052O11 Length = 106467 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 cggcgtcgtcgttgccggcgc 58 ||||||||||||||||||||| Sbjct: 55093 cggcgtcgtcgttgccggcgc 55073
>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0678G09 Length = 139220 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 cggcgtcgtcgttgccggcgc 58 ||||||||||||||||||||| Sbjct: 21382 cggcgtcgtcgttgccggcgc 21362
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcgt 49 ||||||||||||||||||||| Sbjct: 150502 cctcgtcgtcggcgtcgtcgt 150482
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcgt 49 ||||||||||||||||||||| Sbjct: 36392 cctcgtcgtcggcgtcgtcgt 36372
>dbj|AK105541.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-H10, full insert sequence Length = 1567 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcgt 49 ||||||||||||||||||||| Sbjct: 677 cctcgtcgtcggcgtcgtcgt 657
>dbj|AK072515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131K07, full insert sequence Length = 1098 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 gcaccgcgtcttcggcgccagcaac 258 ||||||||| ||||||||||||||| Sbjct: 368 gcaccgcgtgttcggcgccagcaac 392
>dbj|AK071512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098N15, full insert sequence Length = 1499 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 cggcgtcgtcgttgccggcgc 58 ||||||||||||||||||||| Sbjct: 1070 cggcgtcgtcgttgccggcgc 1090
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ggcctcgtcgtcggcgtcgtcgttg 51 ||||| ||||||||||||||||||| Sbjct: 2144304 ggccttgtcgtcggcgtcgtcgttg 2144280
>dbj|AP004468.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09A24, TM0003, complete sequence Length = 88828 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 88 tcgtcggcggggggcaacggcgccggcgg 116 |||||||||| |||| ||||||||||||| Sbjct: 27188 tcgtcggcggagggcgacggcgccggcgg 27160
>ref|XM_482784.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1531 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 tgcaccgcgtcttcggcgccagca 256 ||||||||||| |||||||||||| Sbjct: 239 tgcaccgcgtcatcggcgccagca 216
>ref|XM_507257.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.35 mRNA Length = 1560 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 tgcaccgcgtcttcggcgccagca 256 ||||||||||| |||||||||||| Sbjct: 254 tgcaccgcgtcatcggcgccagca 231
>ref|XM_475658.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 624 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gtcttcggcgccagcaacgt 260 |||||||||||||||||||| Sbjct: 184 gtcttcggcgccagcaacgt 203
>ref|XM_468445.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 27 ggcctcgtcgtcggcgtcgtcgttgccg 54 ||||||||||||| ||||||||| |||| Sbjct: 123 ggcctcgtcgtcgtcgtcgtcgtcgccg 96
>ref|XM_450043.1| Oryza sativa (japonica cultivar-group), mRNA Length = 558 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 gtcgtcgttgccggcgccgg 61 |||||||||||||||||||| Sbjct: 195 gtcgtcgttgccggcgccgg 214
>ref|NM_197274.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0015K05.5), mRNA Length = 942 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cctcgtcgtcggcgtcgtcg 48 |||||||||||||||||||| Sbjct: 14 cctcgtcgtcggcgtcgtcg 33
>ref|NM_196734.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0094K20.9), mRNA Length = 759 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcgttgc 52 ||||||||||| |||||||||||| Sbjct: 682 cctcgtcgtcgtcgtcgtcgttgc 659
>ref|NM_190397.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gtcttcggcgccagcaacgt 260 |||||||||||||||||||| Sbjct: 313 gtcttcggcgccagcaacgt 332
>ref|NM_192884.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2319 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 cggcggggggcaacggcgccggcg 115 |||||| ||||||||||||||||| Sbjct: 573 cggcggtgggcaacggcgccggcg 550
>gb|AY596298.1| Haloarcula marismortui ATCC 43049 chromosome II, complete sequence Length = 288050 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 gtcgtcggcgtcgtcgttgc 52 |||||||||||||||||||| Sbjct: 113654 gtcgtcggcgtcgtcgttgc 113635
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcg 48 |||||||||||||||||||| Sbjct: 360236 cctcgtcgtcggcgtcgtcg 360217
>gb|AY360387.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0003M24, complete sequence Length = 150085 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gtcggcgtcgtcgttgccgg 55 |||||||||||||||||||| Sbjct: 123323 gtcggcgtcgtcgttgccgg 123304
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tgccggcgccgggcggatcg 69 |||||||||||||||||||| Sbjct: 775981 tgccggcgccgggcggatcg 776000
>gb|AC006716.1| Caenorhabditis elegans cosmid Y13C8A, complete sequence Length = 6561 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 tcgtcgtcggcgtcgtcgttgccg 54 ||||||||| |||||||||||||| Sbjct: 2465 tcgtcgtcgtcgtcgtcgttgccg 2442
>gb|AC006776.1| Caenorhabditis elegans cosmid Y46H3C, complete sequence Length = 32263 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 cctcgtcgtcggcgtcgtcgttgc 52 ||||||||||| |||||||||||| Sbjct: 5358 cctcgtcgtcgtcgtcgtcgttgc 5381
>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06, complete sequence Length = 142659 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tcgtcgtcggcgtcgtcgttgccg 54 ||||||||||||||| |||||||| Sbjct: 5413 tcgtcgtcggcgtcggcgttgccg 5436
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tcgtcgtcggcgtcgtcgttgccg 54 ||||||||||||||| |||||||| Sbjct: 144842 tcgtcgtcggcgtcggcgttgccg 144865
>ref|XM_368035.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07939.4) partial mRNA Length = 3327 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ccttggccgcctcgtcggcg 96 |||||||||||||||||||| Sbjct: 187 ccttggccgcctcgtcggcg 168
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcgtcggcgtcgtcgttgccggcg 57 |||||| ||||||||||||||||| Sbjct: 103648 tcgtcgtcgtcgtcgttgccggcg 103625
>gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0027N19, complete sequence Length = 141368 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gtcttcggcgccagcaacgt 260 |||||||||||||||||||| Sbjct: 105832 gtcttcggcgccagcaacgt 105813
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 tcgtcgtcggcgtcgtcgttgccg 54 ||||||||| |||||||||||||| Sbjct: 30413 tcgtcgtcgtcgtcgtcgttgccg 30390
>gb|AY423467.1| Frankia sp. ARgP5ag essential primary sigma 70 factor (rpoD) gene, partial cds Length = 652 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 397 cgccagctccagcaggacctcgcccgcg 424 |||||||||| ||||||||||| ||||| Sbjct: 374 cgccagctcctgcaggacctcggccgcg 401
>ref|XM_800612.1| Trypanosoma cruzi strain CL Brener nucleolar RNA helicase II (Tc00.1047053508205.20) partial mRNA Length = 1983 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 cagcaggacctcgcccgcgc 425 |||||||||||||||||||| Sbjct: 388 cagcaggacctcgcccgcgc 369
>ref|XM_802042.1| Trypanosoma cruzi strain CL Brener nucleolar RNA helicase II (Tc00.1047053506123.40) partial mRNA Length = 1902 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 cagcaggacctcgcccgcgc 425 |||||||||||||||||||| Sbjct: 388 cagcaggacctcgcccgcgc 369
>ref|XM_808274.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511575.50) partial mRNA Length = 5316 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gcggcctgcaagttcctccg 161 |||||||||||||||||||| Sbjct: 4803 gcggcctgcaagttcctccg 4784
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 ggtcgccgtgcgcggcctgc 150 |||||||||||||||||||| Sbjct: 3184989 ggtcgccgtgcgcggcctgc 3185008
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 cggcgtcgtcgttgccggcgccgg 61 ||||| |||||||||||||||||| Sbjct: 4802672 cggcggcgtcgttgccggcgccgg 4802649
>emb|Z11165.1|RCPHSYNG R.capsulatus complete photosynthesis gene cluster Length = 45959 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gatcggtgatcaccttggcc 84 |||||||||||||||||||| Sbjct: 28513 gatcggtgatcaccttggcc 28494
>gb|AY795561.1| Triticum aestivum LOB1 mRNA, complete cds Length = 1020 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gtcttcggcgccagcaacgt 260 |||||||||||||||||||| Sbjct: 326 gtcttcggcgccagcaacgt 345
>emb|BX649209.1| Mycobacterium ulcerans plasmid pMUM001, complete plasmid genome Length = 174155 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 gccggcgccgggcggatcgg 70 |||||||||||||||||||| Sbjct: 77255 gccggcgccgggcggatcgg 77274 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 gccggcgccgggcggatcgg 70 |||||||||||||||||||| Sbjct: 25811 gccggcgccgggcggatcgg 25792 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 gccggcgccgggcggatcgg 70 |||||||||||||||||||| Sbjct: 21843 gccggcgccgggcggatcgg 21862
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cggcgccgggcggatcggtg 72 |||||||||||||||||||| Sbjct: 273475 cggcgccgggcggatcggtg 273456
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cggcgccgggcggatcggtg 72 |||||||||||||||||||| Sbjct: 39150 cggcgccgggcggatcggtg 39131
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 cggcgtcgtcgttgccggcgccgg 61 ||||| |||||||||||||||||| Sbjct: 325888 cggcggcgtcgttgccggcgccgg 325911
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccttggccgcctcgtcggcg 96 |||||||||||||||||||| Sbjct: 531279 ccttggccgcctcgtcggcg 531298
>emb|AJ417910.1|SOL417910 Streptomyces olivaceoviridis ngcE gene, ngcF gene, ngcG gene and ngcR gene Length = 5639 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ccttggccgcctcgtcggcg 96 |||||||||||||||||||| Sbjct: 2057 ccttggccgcctcgtcggcg 2038
>gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 genomic sequence, complete sequence Length = 123292 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cctcgtcgtcggcgtcgtcg 48 |||||||||||||||||||| Sbjct: 38931 cctcgtcgtcggcgtcgtcg 38950
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cctcgtcgtcggcgtcgtcg 48 |||||||||||||||||||| Sbjct: 122578 cctcgtcgtcggcgtcgtcg 122597
>gb|DQ145933.1| Hordeum vulgare subsp. vulgare ABA 8'-hydroxylase 2 mRNA, complete cds Length = 1567 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcg 48 |||||||||||||||||||| Sbjct: 868 cctcgtcgtcggcgtcgtcg 849
>ref|NM_001029781.1| Caenorhabditis elegans Y13C8A.2 (Y13C8A.2) mRNA, complete cds Length = 350 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 tcgtcgtcggcgtcgtcgttgccg 54 ||||||||| |||||||||||||| Sbjct: 167 tcgtcgtcgtcgtcgtcgttgccg 144
>ref|NM_071083.1| Caenorhabditis elegans Y46H3C.5 (Y46H3C.5) mRNA, complete cds Length = 519 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcgttgc 52 ||||||||||| |||||||||||| Sbjct: 62 cctcgtcgtcgtcgtcgtcgttgc 39
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tcgtcgtcggcgtcgtcgttgccg 54 ||||||||||||||||||| |||| Sbjct: 65361 tcgtcgtcggcgtcgtcgtcgccg 65384
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcgtcggcgtcgtcgttgccggcg 57 |||||| ||||||||||||||||| Sbjct: 21647022 tcgtcgtcgtcgtcgttgccggcg 21646999 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gtcgtcgttgccggcgccgg 61 |||||||||||||||||||| Sbjct: 1219480 gtcgtcgttgccggcgccgg 1219461
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcgttgc 52 ||||||||||| |||||||||||| Sbjct: 80261 cctcgtcgtcgtcgtcgtcgttgc 80238
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gtcttcggcgccagcaacgt 260 |||||||||||||||||||| Sbjct: 130637 gtcttcggcgccagcaacgt 130656
>dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0006C01 Length = 153865 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cggcggggggcaacggcgccggcg 115 |||||| ||||||||||||||||| Sbjct: 47302 cggcggtgggcaacggcgccggcg 47325
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 tgcaccgcgtcttcggcgccagca 256 ||||||||||| |||||||||||| Sbjct: 13809 tgcaccgcgtcatcggcgccagca 13786
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gtcttcggcgccagcaacgt 260 |||||||||||||||||||| Sbjct: 15414 gtcttcggcgccagcaacgt 15433
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 27 ggcctcgtcgtcggcgtcgtcgttgccg 54 ||||||||||||| ||||||||| |||| Sbjct: 30550 ggcctcgtcgtcgtcgtcgtcgtcgccg 30577
>dbj|AP005789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0563F09 Length = 174905 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gtcgtcgttgccggcgccgg 61 |||||||||||||||||||| Sbjct: 50354 gtcgtcgttgccggcgccgg 50335
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcgtcggcgtcgtcgttgccggcg 57 |||||| ||||||||||||||||| Sbjct: 46481 tcgtcgtcgtcgtcgttgccggcg 46458
>dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone: B1100F03 Length = 139217 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gtcggcgtcgtcgttgccgg 55 |||||||||||||||||||| Sbjct: 40453 gtcggcgtcgtcgttgccgg 40472
>gb|AE004997.1| Halobacterium sp. NRC-1 section 28 of 170 of the complete genome Length = 17112 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcgtcggcgtcgtcgttgcc 53 |||||||||||||||||||| Sbjct: 2298 tcgtcggcgtcgtcgttgcc 2279
>gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequence Length = 35159 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccttggccgcctcgtcggcg 96 |||||||||||||||||||| Sbjct: 21538 ccttggccgcctcgtcggcg 21557
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 tgcaccgcgtcttcggcgccagca 256 ||||||||||| |||||||||||| Sbjct: 135236 tgcaccgcgtcatcggcgccagca 135213
>dbj|AK121919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106D14, full insert sequence Length = 1129 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gtcttcggcgccagcaacgt 260 |||||||||||||||||||| Sbjct: 452 gtcttcggcgccagcaacgt 471
>emb|X52291.1|RCCRTAK Rhodobacter capsulatus clustered genes crtA-F, I and K involved in carotenoid biosynthesis Length = 10068 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gatcggtgatcaccttggcc 84 |||||||||||||||||||| Sbjct: 2655 gatcggtgatcaccttggcc 2636
>dbj|AK109969.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-C04, full insert sequence Length = 3464 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 tcgtcgtcggcgtcgtcgttgccg 54 |||||| ||||||||||||||||| Sbjct: 3357 tcgtcgccggcgtcgtcgttgccg 3334
>dbj|AK109236.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-F08, full insert sequence Length = 607 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 cctcgtcgtcggcgtcgtcgttgc 52 ||||||||||| |||||||||||| Sbjct: 257 cctcgtcgtcgtcgtcgtcgttgc 234
>dbj|AK104843.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G07, full insert sequence Length = 1531 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 tgcaccgcgtcttcggcgccagca 256 ||||||||||| |||||||||||| Sbjct: 239 tgcaccgcgtcatcggcgccagca 216
>dbj|AK099586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042N12, full insert sequence Length = 3025 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcgtcggcgtcgtcgttgccggcg 57 |||||| ||||||||||||||||| Sbjct: 2475 tcgtcgtcgtcgtcgttgccggcg 2452
>dbj|AK071203.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083E07, full insert sequence Length = 1560 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 tgcaccgcgtcttcggcgccagca 256 ||||||||||| |||||||||||| Sbjct: 254 tgcaccgcgtcatcggcgccagca 231
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cgtcggcgtcgtcgttgccg 54 |||||||||||||||||||| Sbjct: 750038 cgtcggcgtcgtcgttgccg 750019
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 tcaccttggccgcctcgtcggcgg 97 |||||||||| ||||||||||||| Sbjct: 19201 tcaccttggcggcctcgtcggcgg 19178
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cttggccgcctcgtcggcgg 97 |||||||||||||||||||| Sbjct: 882494 cttggccgcctcgtcggcgg 882475
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 gccggcgccgggcggatcggtgat 74 ||||||||||||||||| |||||| Sbjct: 1829420 gccggcgccgggcggattggtgat 1829397
>emb|Z81519.1|CEF29C12 Caenorhabditis elegans Cosmid F29C12, complete sequence Length = 30225 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 tcgtcgtcggcgtcgtcgttgccg 54 ||||||||| |||||||||||||| Sbjct: 6426 tcgtcgtcgtcgtcgtcgttgccg 6403
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cgcaagtgccagcctgactg 182 |||||||||||||||||||| Sbjct: 2670790 cgcaagtgccagcctgactg 2670771
>gb|J04969.1|RCACRTI Rhodobacter capsulatus photoprotective pigment (crtI) gene, complete cds Length = 1660 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gatcggtgatcaccttggcc 84 |||||||||||||||||||| Sbjct: 806 gatcggtgatcaccttggcc 787 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,492,618 Number of Sequences: 3902068 Number of extensions: 2492618 Number of successful extensions: 65390 Number of sequences better than 10.0: 174 Number of HSP's better than 10.0 without gapping: 197 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61553 Number of HSP's gapped (non-prelim): 3819 length of query: 434 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 412 effective length of database: 17,147,199,772 effective search space: 7064646306064 effective search space used: 7064646306064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
