ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast58a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191206.1| Oryza sativa (japonica cultivar-group), predic... 250 3e-63
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 250 3e-63
3dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic D... 250 3e-63
4gb|AY365053.1| Ralstonia eutropha JMP134 plasmid pJP4, complete ... 46 0.10
5gb|CP000093.1| Ralstonia eutropha JMP134 plasmid 1, complete seq... 46 0.10
6gb|BC053437.1| Mus musculus CCR4-NOT transcription complex, subu... 44 0.40
7gb|BC030332.1| Mus musculus CCR4-NOT transcription complex, subu... 44 0.40
8dbj|AK141718.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 44 0.40
9dbj|AK173003.1| Mus musculus mRNA for mKIAA0691 protein 44 0.40
10ref|NM_146176.1| Mus musculus CCR4-NOT transcription complex, su... 44 0.40
11gb|AC121792.3| Mus musculus BAC clone RP23-404J7 from 3, complet... 44 0.40
12ref|XM_465897.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
13gb|AE009369.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.6
14gb|AE008245.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 1.6
15emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 42 1.6
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
17dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.6
18dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19ref|XM_479587.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
20ref|XM_525116.1| PREDICTED: Pan troglodytes similar to serologic... 40 6.2
21gb|AC119670.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
22ref|XM_417386.1| PREDICTED: Gallus gallus similar to sulfatase 2... 40 6.2
23ref|XM_653499.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.2
24gb|AY429655.1| Danio rerio mitochondrial topoisomerase I mRNA, c... 40 6.2
25gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, comple... 40 6.2
26gb|BC096851.1| Danio rerio mitochondrial topoisomerase I, mRNA (... 40 6.2
27gb|AC096539.2| Homo sapiens chromosome 1 clone RP11-150L22, comp... 40 6.2
28ref|NM_001001838.1| Danio rerio mitochondrial topoisomerase I (t... 40 6.2
29gb|AC010515.8| Homo sapiens chromosome 19 clone LLNLR-249H9, com... 40 6.2
30dbj|AK023517.1| Homo sapiens cDNA FLJ13455 fis, clone PLACE1003256 40 6.2
31dbj|AB074972.2| Oryza sativa (japonica cultivar-group) OsEIL2 mR... 40 6.2
32dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
35gb|AE004696.1| Pseudomonas aeruginosa PAO1, section 257 of 529 o... 40 6.2
36gb|AF235504.1|AF235504 Streptomyces hygroscopicus var. ascomycet... 40 6.2
37dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
38emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 6.2
39emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 6.2
40dbj|AK060806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
41gb|AY108352.1| Zea mays PCO148182 mRNA sequence 40 6.2
42gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
43gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
44emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.2
45emb|AL713948.4|CNS07YPR Oryza sativa chromosome 12, . BAC OJ1008... 40 6.2 
>ref|NM_191206.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1071

 Score =  250 bits (126), Expect = 3e-63
 Identities = 174/190 (91%)
 Strand = Plus / Plus

                                                                       
Query: 272 gtccccgacggtggggcacatcgagggcgcgcgcgccatctgggagctccccgcggcgcc 331
           ||||||||||||||||  ||| |  || ||||||||||||||||||||||||||||||||
Sbjct: 216 gtccccgacggtggggtccataggtggtgcgcgcgccatctgggagctccccgcggcgcc 275

                                                                       
Query: 332 ggccaggggggtcctcttcgtagcccacggctgccactgccgcccggagaacttctggcc 391
           |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 276 ggccagggcggtcctcttcgtcgcccacgggtgccactgccgcccggagaacttctggcc 335

                                                                       
Query: 392 gccgtcccagcactgccccggctgcgttgggctgccggaggacgtcgccatcacggcccg 451
           |||||||| || ||||||||| ||||| || |||||||||||||||||||||||||  ||
Sbjct: 336 gccgtccccgcgctgccccgggtgcgtcggcctgccggaggacgtcgccatcacggaacg 395

                     
Query: 452 cgcgctacgg 461
           ||||||||||
Sbjct: 396 cgcgctacgg 405



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 180 gccgccggcgtcttcctctactcc 203
           ||||||||||| ||||||||||||
Sbjct: 112 gccgccggcgtattcctctactcc 135
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  250 bits (126), Expect = 3e-63
 Identities = 174/190 (91%)
 Strand = Plus / Minus

                                                                            
Query: 272      gtccccgacggtggggcacatcgagggcgcgcgcgccatctgggagctccccgcggcgcc 331
                ||||||||||||||||  ||| |  || ||||||||||||||||||||||||||||||||
Sbjct: 31314822 gtccccgacggtggggtccataggtggtgcgcgcgccatctgggagctccccgcggcgcc 31314763

                                                                            
Query: 332      ggccaggggggtcctcttcgtagcccacggctgccactgccgcccggagaacttctggcc 391
                |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 31314762 ggccagggcggtcctcttcgtcgcccacgggtgccactgccgcccggagaacttctggcc 31314703

                                                                            
Query: 392      gccgtcccagcactgccccggctgcgttgggctgccggaggacgtcgccatcacggcccg 451
                |||||||| || ||||||||| ||||| || |||||||||||||||||||||||||  ||
Sbjct: 31314702 gccgtccccgcgctgccccgggtgcgtcggcctgccggaggacgtcgccatcacggaacg 31314643

                          
Query: 452      cgcgctacgg 461
                ||||||||||
Sbjct: 31314642 cgcgctacgg 31314633



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 180      gccgccggcgtcttcctctactcc 203
                ||||||||||| ||||||||||||
Sbjct: 31314926 gccgccggcgtattcctctactcc 31314903
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>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0481E12
          Length = 161563

 Score =  250 bits (126), Expect = 3e-63
 Identities = 174/190 (91%)
 Strand = Plus / Minus

                                                                         
Query: 272   gtccccgacggtggggcacatcgagggcgcgcgcgccatctgggagctccccgcggcgcc 331
             ||||||||||||||||  ||| |  || ||||||||||||||||||||||||||||||||
Sbjct: 69105 gtccccgacggtggggtccataggtggtgcgcgcgccatctgggagctccccgcggcgcc 69046

                                                                         
Query: 332   ggccaggggggtcctcttcgtagcccacggctgccactgccgcccggagaacttctggcc 391
             |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 69045 ggccagggcggtcctcttcgtcgcccacgggtgccactgccgcccggagaacttctggcc 68986

                                                                         
Query: 392   gccgtcccagcactgccccggctgcgttgggctgccggaggacgtcgccatcacggcccg 451
             |||||||| || ||||||||| ||||| || |||||||||||||||||||||||||  ||
Sbjct: 68985 gccgtccccgcgctgccccgggtgcgtcggcctgccggaggacgtcgccatcacggaacg 68926

                       
Query: 452   cgcgctacgg 461
             ||||||||||
Sbjct: 68925 cgcgctacgg 68916



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 180   gccgccggcgtcttcctctactcc 203
             ||||||||||| ||||||||||||
Sbjct: 69209 gccgccggcgtattcctctactcc 69186
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>gb|AY365053.1| Ralstonia eutropha JMP134 plasmid pJP4, complete sequence
          Length = 87688

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 422   gctgccggaggacgtcgccatcacggcccgc 452
             |||||||| ||||| ||||||||||||||||
Sbjct: 44456 gctgccggtggacggcgccatcacggcccgc 44486
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>gb|CP000093.1| Ralstonia eutropha JMP134 plasmid 1, complete sequence
          Length = 87688

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 422   gctgccggaggacgtcgccatcacggcccgc 452
             |||||||| ||||| ||||||||||||||||
Sbjct: 44456 gctgccggtggacggcgccatcacggcccgc 44486
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>gb|BC053437.1| Mus musculus CCR4-NOT transcription complex, subunit 3, mRNA (cDNA
            clone MGC:59466 IMAGE:6394085), complete cds
          Length = 2767

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 236  ctcaaaggaatccagtacggca 257
            ||||||||||||||||||||||
Sbjct: 1525 ctcaaaggaatccagtacggca 1546
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>gb|BC030332.1| Mus musculus CCR4-NOT transcription complex, subunit 3, mRNA (cDNA
            clone MGC:40675 IMAGE:5400871), complete cds
          Length = 2849

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 236  ctcaaaggaatccagtacggca 257
            ||||||||||||||||||||||
Sbjct: 1693 ctcaaaggaatccagtacggca 1714
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>dbj|AK141718.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030040O10 product:CCR4-NOT
            transcription complex, subunit 3, full insert sequence
          Length = 2964

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 236  ctcaaaggaatccagtacggca 257
            ||||||||||||||||||||||
Sbjct: 1824 ctcaaaggaatccagtacggca 1845
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>dbj|AK173003.1| Mus musculus mRNA for mKIAA0691 protein
          Length = 2309

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 236  ctcaaaggaatccagtacggca 257
            ||||||||||||||||||||||
Sbjct: 1178 ctcaaaggaatccagtacggca 1199
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>ref|NM_146176.1| Mus musculus CCR4-NOT transcription complex, subunit 3 (Cnot3), mRNA
          Length = 2849

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 236  ctcaaaggaatccagtacggca 257
            ||||||||||||||||||||||
Sbjct: 1693 ctcaaaggaatccagtacggca 1714
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>gb|AC121792.3| Mus musculus BAC clone RP23-404J7 from 3, complete sequence
          Length = 191723

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 236   ctcaaaggaatccagtacggca 257
             ||||||||||||||||||||||
Sbjct: 68701 ctcaaaggaatccagtacggca 68722
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>ref|XM_465897.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 558

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 gcgcgcgcgccatctgggagc 318
           |||||||||||||||||||||
Sbjct: 419 gcgcgcgcgccatctgggagc 439
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>gb|AE009369.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 139 of
            187 of the complete sequence
          Length = 11923

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 432  gacgtcgccatcacggcccgcgcgc 456
            ||||| |||||||||||||||||||
Sbjct: 5240 gacgtggccatcacggcccgcgcgc 5216
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>gb|AE008245.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 49 of
           187 of the complete sequence
          Length = 11874

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 432 gacgtcgccatcacggcccgcgcgc 456
           ||||| |||||||||||||||||||
Sbjct: 578 gacgtggccatcacggcccgcgcgc 602
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 258   tcgccggcgccctcgtccccg 278
             |||||||||||||||||||||
Sbjct: 93210 tcgccggcgccctcgtccccg 93190
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 298      gcgcgcgcgccatctgggagc 318
                |||||||||||||||||||||
Sbjct: 18192187 gcgcgcgcgccatctgggagc 18192207
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 290     catcgagggcgcgcgcgccat 310
               |||||||||||||||||||||
Sbjct: 9024437 catcgagggcgcgcgcgccat 9024417
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>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0047E05
          Length = 184323

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 298    gcgcgcgcgccatctgggagc 318
              |||||||||||||||||||||
Sbjct: 115588 gcgcgcgcgccatctgggagc 115608
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>ref|XM_479587.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2104

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   agagcaagccgccgccgccg 107
            ||||||||||||||||||||
Sbjct: 1590 agagcaagccgccgccgccg 1609
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>ref|XM_525116.1| PREDICTED: Pan troglodytes similar to serologically defined colon
            cancer antigen 8; centrosomal colon cancer autoantigen
            (LOC469732), mRNA
          Length = 4038

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 259  cgccggcgccctcgtccccg 278
            ||||||||||||||||||||
Sbjct: 3108 cgccggcgccctcgtccccg 3127
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>gb|AC119670.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007H22, complete sequence
          Length = 160938

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   cgcggccgccggcgtcttcc 195
             ||||||||||||||||||||
Sbjct: 43919 cgcggccgccggcgtcttcc 43938
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>ref|XM_417386.1| PREDICTED: Gallus gallus similar to sulfatase 2 isoform a
           precursor; extracellular sulfatase SULF-2 (LOC419209),
           mRNA
          Length = 5074

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 gggagctccccgcggcgccg 332
           ||||||||||||||||||||
Sbjct: 935 gggagctccccgcggcgccg 954
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>ref|XM_653499.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0987.2), mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 33  tcctccccatcaccactccc 52
           ||||||||||||||||||||
Sbjct: 764 tcctccccatcaccactccc 745
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>gb|AY429655.1| Danio rerio mitochondrial topoisomerase I mRNA, complete cds;
           nuclear gene for mitochondrial product
          Length = 1969

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 425 gccggaggacgtcgccatca 444
           ||||||||||||||||||||
Sbjct: 673 gccggaggacgtcgccatca 692
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>gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, complete sequence
          Length = 179881

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   tccccgcggcgccggccagg 338
             ||||||||||||||||||||
Sbjct: 23695 tccccgcggcgccggccagg 23676
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>gb|BC096851.1| Danio rerio mitochondrial topoisomerase I, mRNA (cDNA clone
           MGC:111830 IMAGE:2601221), complete cds
          Length = 1969

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 425 gccggaggacgtcgccatca 444
           ||||||||||||||||||||
Sbjct: 673 gccggaggacgtcgccatca 692
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>gb|AC096539.2| Homo sapiens chromosome 1 clone RP11-150L22, complete sequence
          Length = 183307

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    cgccggcgccctcgtccccg 278
              ||||||||||||||||||||
Sbjct: 123864 cgccggcgccctcgtccccg 123883
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>ref|NM_001001838.1| Danio rerio mitochondrial topoisomerase I (top1mt), mRNA
          Length = 1969

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 425 gccggaggacgtcgccatca 444
           ||||||||||||||||||||
Sbjct: 673 gccggaggacgtcgccatca 692
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>gb|AC010515.8| Homo sapiens chromosome 19 clone LLNLR-249H9, complete sequence
          Length = 41518

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    cctccccatcaccactcccc 53
             ||||||||||||||||||||
Sbjct: 13081 cctccccatcaccactcccc 13100
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>dbj|AK023517.1| Homo sapiens cDNA FLJ13455 fis, clone PLACE1003256
          Length = 2216

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 259 cgccggcgccctcgtccccg 278
           ||||||||||||||||||||
Sbjct: 446 cgccggcgccctcgtccccg 465
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>dbj|AB074972.2| Oryza sativa (japonica cultivar-group) OsEIL2 mRNA for
            ethylene-insensitive-3-like protein, complete cds
          Length = 1934

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   agagcaagccgccgccgccg 107
            ||||||||||||||||||||
Sbjct: 1529 agagcaagccgccgccgccg 1548
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 356      ccacggctgccactgccgcc 375
                ||||||||||||||||||||
Sbjct: 16549676 ccacggctgccactgccgcc 16549695
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     cgcggccgccggcgtcttcc 195
               ||||||||||||||||||||
Sbjct: 6842932 cgcggccgccggcgtcttcc 6842913
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 88       agagcaagccgccgccgccg 107
                ||||||||||||||||||||
Sbjct: 29062994 agagcaagccgccgccgccg 29062975
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>gb|AE004696.1| Pseudomonas aeruginosa PAO1, section 257 of 529 of the complete
            genome
          Length = 14449

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   agagcaagccgccgccgccg 107
            ||||||||||||||||||||
Sbjct: 5070 agagcaagccgccgccgccg 5089
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>gb|AF235504.1|AF235504 Streptomyces hygroscopicus var. ascomyceticus FK520 biosynthetic gene
             cluster, partial sequence
          Length = 77534

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 386   ctggccgccgtcccagcactgccc 409
             |||||||||||| |||||||||||
Sbjct: 40547 ctggccgccgtcacagcactgccc 40524



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 386   ctggccgccgtcccagcactgccc 409
             |||||||||||| |||||||||||
Sbjct: 21361 ctggccgccgtcacagcactgccc 21338
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>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1200_C08
          Length = 106214

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    agagcaagccgccgccgccg 107
             ||||||||||||||||||||
Sbjct: 10951 agagcaagccgccgccgccg 10932
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 384     ttctggccgccgtcccagcactgc 407
               |||||||||||||||||| |||||
Sbjct: 1017035 ttctggccgccgtcccagaactgc 1017012
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 265     cgccctcgtccccgacggtggggc 288
               |||||||||||||||||| |||||
Sbjct: 1636565 cgccctcgtccccgacggcggggc 1636588
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>dbj|AK060806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-G01, full
            insert sequence
          Length = 2103

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   agagcaagccgccgccgccg 107
            ||||||||||||||||||||
Sbjct: 1589 agagcaagccgccgccgccg 1608
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>gb|AY108352.1| Zea mays PCO148182 mRNA sequence
          Length = 1638

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 95  gccgccgccgccgtctcacg 114
           ||||||||||||||||||||
Sbjct: 101 gccgccgccgccgtctcacg 120
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     cgcggccgccggcgtcttcc 195
               ||||||||||||||||||||
Sbjct: 6909399 cgcggccgccggcgtcttcc 6909380
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 356      ccacggctgccactgccgcc 375
                ||||||||||||||||||||
Sbjct: 16502909 ccacggctgccactgccgcc 16502928
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>emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa0054H15 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155947

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   ccacggctgccactgccgcc 375
             ||||||||||||||||||||
Sbjct: 24114 ccacggctgccactgccgcc 24095
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>emb|AL713948.4|CNS07YPR Oryza sativa chromosome 12, . BAC OJ1008_A01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 129944

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 356    ccacggctgccactgccgcc 375
              ||||||||||||||||||||
Sbjct: 121090 ccacggctgccactgccgcc 121071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,666,298
Number of Sequences: 3902068
Number of extensions: 3666298
Number of successful extensions: 93870
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92669
Number of HSP's gapped (non-prelim): 1198
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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