ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast58a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000316.1| Polaromonas sp. JS666, complete genome 46 0.096
2gb|AC166248.20| Mus musculus BAC RP23-311A8 (Roswell Park Cance... 44 0.38
3gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 44 0.38
4ref|XM_953320.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.38
5ref|XM_327697.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.38
6ref|NM_146175.2| Mus musculus zinc finger protein 282 (Zfp282), ... 44 0.38
7gb|AC166290.7| Mus musculus BAC RP23-14P17 (Roswell Park Cancer... 44 0.38
8gb|BC025581.1| Mus musculus zinc finger protein 282, mRNA (cDNA ... 44 0.38
9dbj|AK088531.1| Mus musculus 2 days neonate thymus thymic cells ... 44 0.38
10dbj|AK030516.1| Mus musculus adult male pituitary gland cDNA, RI... 44 0.38
11dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.38
12gb|AC144795.5| Mus musculus BAC clone RP24-374I3 from chromosome... 44 0.38
13gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
14ref|XM_960499.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
15ref|XM_330097.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
16ref|NM_145138.1| Mus musculus NIMA (never in mitosis gene a)-rel... 42 1.5
17gb|AC159244.4| Mus musculus BAC clone RP24-309L4 from chromosome... 42 1.5
18emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 42 1.5
19emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.5
20emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 42 1.5
21gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.5
22gb|AC113355.2| Homo sapiens chromosome 5 clone CTD-3007L5, compl... 42 1.5
23dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 1.5
24gb|AE005802.1| Caulobacter crescentus CB15 section 128 of 359 of... 42 1.5
25gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosom... 42 1.5
26dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
27dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 42 1.5
28dbj|AK173323.1| Mus musculus mRNA for mKIAA1995 protein 42 1.5
29gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 1.5
30gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 1.5
31gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.5
32gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
33emb|AJ489828.1|MMU489828 Mus musculus mRNA for NimA-related prot... 42 1.5
34ref|NM_192279.1| Oryza sativa (japonica cultivar-group), predic... 40 5.9
35gb|AC108777.7| Mus musculus chromosome 18, clone RP23-368H22, co... 40 5.9
36ref|XM_960096.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
37ref|XM_955478.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
38ref|XM_325463.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
39ref|XM_328763.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
40gb|AC126041.3| Mus musculus BAC clone RP24-268A23 from chromosom... 40 5.9
41gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 5.9
42emb|CR956430.2| M.truncatula DNA sequence from clone MTH2-49I19 ... 40 5.9
43gb|AC135413.43| Medicago truncatula clone mth2-16n19, complete s... 40 5.9
44gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 40 5.9
45gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.9
46emb|AL161614.16| Human DNA sequence from clone RP11-346L13 on ch... 40 5.9
47emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segmen... 40 5.9
48gb|AC130680.13| Mus musculus chromosome 7, clone RP23-180G17, co... 40 5.9
49gb|AC008761.8| Homo sapiens chromosome 19 clone CTD-3149D2, comp... 40 5.9
50gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold 40 5.9
51gb|AC093786.3| Homo sapiens BAC clone RP11-213A7 from 4, complet... 40 5.9
52dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
53gb|AY524791.1| Verticillium dahliae allergen Asp f2-like protein... 40 5.9
54gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.9
55dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
56dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
57gb|AC115850.11| Mus musculus chromosome 7, clone RP24-252O10, co... 40 5.9
58gb|AC171680.5| Mus musculus chromosome 7, clone RP23-146B24, com... 40 5.9
59emb|AL671910.9| Mouse DNA sequence from clone RP23-245M12 on chr... 40 5.9 
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 417     tgctggcggtgctgctggtgtgc 439
               |||||||||||||||||||||||
Sbjct: 1296530 tgctggcggtgctgctggtgtgc 1296552
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>gb|AC166248.20| Mus musculus  BAC RP23-311A8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 182636

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 312    tggcggtggtggtgccaccggcggcggcgg 341
              |||||||||||||| || ||||||||||||
Sbjct: 152864 tggcggtggtggtggcagcggcggcggcgg 152893
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 415     actgctggcggtgctgctggtg 436
               ||||||||||||||||||||||
Sbjct: 1445551 actgctggcggtgctgctggtg 1445572
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>ref|XM_953320.1| Neurospora crassa OR74A hypothetical protein (NCU07412.1) partial
            mRNA
          Length = 3966

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 316  ggtggtggtgccaccggcggcg 337
            ||||||||||||||||||||||
Sbjct: 3026 ggtggtggtgccaccggcggcg 3005
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>ref|XM_327697.1| Neurospora crassa OR74A hypothetical protein (NCU07412.1) partial
            mRNA
          Length = 3966

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 316  ggtggtggtgccaccggcggcg 337
            ||||||||||||||||||||||
Sbjct: 3026 ggtggtggtgccaccggcggcg 3005
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>ref|NM_146175.2| Mus musculus zinc finger protein 282 (Zfp282), mRNA
          Length = 3718

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 312  tggcggtggtggtgccaccggcggcggcgg 341
            |||||||||||||| || ||||||||||||
Sbjct: 1508 tggcggtggtggtggcagcggcggcggcgg 1537
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>gb|AC166290.7| Mus musculus  BAC RP23-14P17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 242055

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 312    tggcggtggtggtgccaccggcggcggcgg 341
              |||||||||||||| || ||||||||||||
Sbjct: 227835 tggcggtggtggtggcagcggcggcggcgg 227806
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>gb|BC025581.1| Mus musculus zinc finger protein 282, mRNA (cDNA clone MGC:36603
            IMAGE:5325029), complete cds
          Length = 3239

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 312  tggcggtggtggtgccaccggcggcggcgg 341
            |||||||||||||| || ||||||||||||
Sbjct: 1411 tggcggtggtggtggcagcggcggcggcgg 1440
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>dbj|AK088531.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430019K09
            product:ZINC FINGER PROTEIN 282 (HTLV-I U5RE BINDING
            PROTEIN 1) (HUB-1) homolog [Homo sapiens], full insert
            sequence
          Length = 3718

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 312  tggcggtggtggtgccaccggcggcggcgg 341
            |||||||||||||| || ||||||||||||
Sbjct: 1508 tggcggtggtggtggcagcggcggcggcgg 1537
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>dbj|AK030516.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
            enriched library, clone:5330424K19 product:ZINC FINGER
            PROTEIN 282 (HTLV-I U5RE BINDING PROTEIN 1) (HUB-1)
            homolog [Homo sapiens], full insert sequence
          Length = 3613

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 312  tggcggtggtggtgccaccggcggcggcgg 341
            |||||||||||||| || ||||||||||||
Sbjct: 1417 tggcggtggtggtggcagcggcggcggcgg 1446
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 280   aacggcggcggtgacatcggcg 301
             ||||||||||||||||||||||
Sbjct: 44843 aacggcggcggtgacatcggcg 44864
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>gb|AC144795.5| Mus musculus BAC clone RP24-374I3 from chromosome 6, complete sequence
          Length = 184775

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 312   tggcggtggtggtgccaccggcggcggcgg 341
             |||||||||||||| || ||||||||||||
Sbjct: 36885 tggcggtggtggtggcagcggcggcggcgg 36856
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>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08,
              complete sequence
          Length = 197156

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 313    ggcggtggtggtgccaccggcggcggcgg 341
              |||||||| |||| |||||||||||||||
Sbjct: 132694 ggcggtggcggtgtcaccggcggcggcgg 132722
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>ref|XM_960499.1| Neurospora crassa OR74A hypothetical protein (NCU02910.1) partial
           mRNA
          Length = 1185

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 416 ctgctggcggtgctgctggtg 436
           |||||||||||||||||||||
Sbjct: 875 ctgctggcggtgctgctggtg 895



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  actgctggcggtgctgctgg 434
            ||||||||||||||||||||
Sbjct: 1036 actgctggcggtgctgctgg 1055
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>ref|XM_330097.1| Neurospora crassa OR74A hypothetical protein (NCU02910.1) partial
           mRNA
          Length = 1185

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 416 ctgctggcggtgctgctggtg 436
           |||||||||||||||||||||
Sbjct: 875 ctgctggcggtgctgctggtg 895



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  actgctggcggtgctgctgg 434
            ||||||||||||||||||||
Sbjct: 1036 actgctggcggtgctgctgg 1055
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>ref|NM_145138.1| Mus musculus NIMA (never in mitosis gene a)-related expressed kinase
            9 (Nek9), mRNA
          Length = 5384

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 301  ggaggtggcattggcggtggtggtg 325
            |||||||||||||| ||||||||||
Sbjct: 2370 ggaggtggcattggtggtggtggtg 2394
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>gb|AC159244.4| Mus musculus BAC clone RP24-309L4 from chromosome 12, complete sequence
          Length = 216500

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 301   ggaggtggcattggcggtggtggtg 325
             |||||||||||||| ||||||||||
Sbjct: 13226 ggaggtggcattggtggtggtggtg 13202
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 313     ggcggtggtggtgccaccggc 333
               |||||||||||||||||||||
Sbjct: 4651174 ggcggtggtggtgccaccggc 4651194
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>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 416    ctgctggcggtgctgctggtg 436
              |||||||||||||||||||||
Sbjct: 124112 ctgctggcggtgctgctggtg 124092
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>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 416    ctgctggcggtgctgctggtg 436
              |||||||||||||||||||||
Sbjct: 280787 ctgctggcggtgctgctggtg 280767
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 416   ctgctggcggtgctgctggtg 436
             |||||||||||||||||||||
Sbjct: 74868 ctgctggcggtgctgctggtg 74848
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>gb|AC113355.2| Homo sapiens chromosome 5 clone CTD-3007L5, complete sequence
          Length = 130307

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 301   ggaggtggcattggcggtggtggtg 325
             |||| ||||||||||||||||||||
Sbjct: 40493 ggagctggcattggcggtggtggtg 40469
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 417     tgctggcggtgctgctggtgt 437
               |||||||||||||||||||||
Sbjct: 4809855 tgctggcggtgctgctggtgt 4809835
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>gb|AE005802.1| Caulobacter crescentus CB15 section 128 of 359 of the complete genome
          Length = 10827

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 418  gctggcggtgctgctggtgtg 438
            |||||||||||||||||||||
Sbjct: 6006 gctggcggtgctgctggtgtg 5986
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>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete sequence
          Length = 222209

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 301    ggaggtggcattggcggtggtggtg 325
              |||||||||||||| ||||||||||
Sbjct: 214885 ggaggtggcattggtggtggtggtg 214861
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 313      ggcggtggtggtgccaccggcggcggcgg 341
                |||||||| |||| |||||||||||||||
Sbjct: 18866863 ggcggtggcggtgtcaccggcggcggcgg 18866891
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 313     ggcggtggtggtgccaccggc 333
               |||||||||||||||||||||
Sbjct: 4728655 ggcggtggtggtgccaccggc 4728675
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>dbj|AK173323.1| Mus musculus mRNA for mKIAA1995 protein
          Length = 5369

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 301  ggaggtggcattggcggtggtggtg 325
            |||||||||||||| ||||||||||
Sbjct: 2379 ggaggtggcattggtggtggtggtg 2403
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 417     tgctggcggtgctgctggtgt 437
               |||||||||||||||||||||
Sbjct: 4814766 tgctggcggtgctgctggtgt 4814746
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 418     gctggcggtgctgctggtgtg 438
               |||||||||||||||||||||
Sbjct: 3534963 gctggcggtgctgctggtgtg 3534983



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 311    ttggcggtggtggtgccaccggcg 334
              |||||||||||||||||| |||||
Sbjct: 998603 ttggcggtggtggtgccagcggcg 998626
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 416     ctgctggcggtgctgctggtg 436
               |||||||||||||||||||||
Sbjct: 4451199 ctgctggcggtgctgctggtg 4451179
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 313      ggcggtggtggtgccaccggcggcggcgg 341
                |||||||| |||| |||||||||||||||
Sbjct: 19027500 ggcggtggcggtgtcaccggcggcggcgg 19027528
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>emb|AJ489828.1|MMU489828 Mus musculus mRNA for NimA-related protein kinase (Nek9 gene)
          Length = 5384

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 301  ggaggtggcattggcggtggtggtg 325
            |||||||||||||| ||||||||||
Sbjct: 2370 ggaggtggcattggtggtggtggtg 2394
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>ref|NM_192279.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 333

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 320 gtggtgccaccggcggcggc 339
           ||||||||||||||||||||
Sbjct: 77  gtggtgccaccggcggcggc 96
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>gb|AC108777.7| Mus musculus chromosome 18, clone RP23-368H22, complete sequence
          Length = 216024

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    ctgcattggtgcctaccttc 70
             ||||||||||||||||||||
Sbjct: 42475 ctgcattggtgcctaccttc 42456
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>ref|XM_960096.1| Neurospora crassa OR74A hypothetical protein (NCU08058.1) partial
           mRNA
          Length = 1869

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 314 gcggtggtggtgccaccggcggcggcgg 341
           |||||||||||||||  |||||||||||
Sbjct: 914 gcggtggtggtgccagtggcggcggcgg 887
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>ref|XM_955478.1| Neurospora crassa OR74A hypothetical protein (NCU05609.1) partial
           mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 298 ggcggaggtggcattggcggtggt 321
           ||||||||||||| ||||||||||
Sbjct: 664 ggcggaggtggcaatggcggtggt 687
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>ref|XM_325463.1| Neurospora crassa OR74A hypothetical protein (NCU05609.1) partial
           mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 298 ggcggaggtggcattggcggtggt 321
           ||||||||||||| ||||||||||
Sbjct: 664 ggcggaggtggcaatggcggtggt 687
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>ref|XM_328763.1| Neurospora crassa OR74A hypothetical protein (NCU08058.1) partial
           mRNA
          Length = 1869

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 314 gcggtggtggtgccaccggcggcggcgg 341
           |||||||||||||||  |||||||||||
Sbjct: 914 gcggtggtggtgccagtggcggcggcgg 887
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>gb|AC126041.3| Mus musculus BAC clone RP24-268A23 from chromosome 18, complete sequence
          Length = 168391

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     ctgcattggtgcctaccttc 70
              ||||||||||||||||||||
Sbjct: 107052 ctgcattggtgcctaccttc 107033
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 418     gctggcggtgctgctggtgt 437
               ||||||||||||||||||||
Sbjct: 3757063 gctggcggtgctgctggtgt 3757044



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 416    ctgctggcggtgctgctggt 435
              ||||||||||||||||||||
Sbjct: 306633 ctgctggcggtgctgctggt 306652
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>emb|CR956430.2| M.truncatula DNA sequence from clone MTH2-49I19 on chromosome 3,
             complete sequence
          Length = 97738

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   ggaggtggcattggcggtgg 320
             ||||||||||||||||||||
Sbjct: 10848 ggaggtggcattggcggtgg 10867
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>gb|AC135413.43| Medicago truncatula clone mth2-16n19, complete sequence
          Length = 92216

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   ggaggtggcattggcggtgg 320
             ||||||||||||||||||||
Sbjct: 25687 ggaggtggcattggcggtgg 25668
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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 421     ggcggtgctgctggtgtgcc 440
               ||||||||||||||||||||
Sbjct: 1207514 ggcggtgctgctggtgtgcc 1207533
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 417     tgctggcggtgctgctggtg 436
               ||||||||||||||||||||
Sbjct: 2515964 tgctggcggtgctgctggtg 2515945
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>emb|AL161614.16| Human DNA sequence from clone RP11-346L13 on chromosome 13q14.3-21.31
             Contains the 5'end of the MRPS31 gene for mitochondrial
             ribosomal protein S31, the SLC25A15 gene for solute
             carrier family 25 (mitochondrial carrier; ornithine
             transporter) member 15 (ORNT1), TPTE and PTEN homologous
             inositol lipid phosphatase (TPIP) pseudogene and 2 CpG
             islands, complete sequence
          Length = 70946

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   ccacgcccacttccgcttcc 216
             ||||||||||||||||||||
Sbjct: 34801 ccacgcccacttccgcttcc 34820
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>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7
          Length = 349213

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    gtgccaccggcggcggcggt 342
              ||||||||||||||||||||
Sbjct: 142104 gtgccaccggcggcggcggt 142123
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>gb|AC130680.13| Mus musculus chromosome 7, clone RP23-180G17, complete sequence
          Length = 136680

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      tcttgagggaggaaggcgga 23
              ||||||||||||||||||||
Sbjct: 110469 tcttgagggaggaaggcgga 110488
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>gb|AC008761.8| Homo sapiens chromosome 19 clone CTD-3149D2, complete sequence
          Length = 226170

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   cccaccatcaccacgcccacttcc 210
             ||||||| ||||||||||||||||
Sbjct: 51666 cccaccaccaccacgcccacttcc 51689
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>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold
          Length = 489372

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    ccttctcgtcctccttgcct 85
             ||||||||||||||||||||
Sbjct: 67811 ccttctcgtcctccttgcct 67792
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>gb|AC093786.3| Homo sapiens BAC clone RP11-213A7 from 4, complete sequence
          Length = 175571

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   actcacccaacacccaagga 151
             ||||||||||||||||||||
Sbjct: 25223 actcacccaacacccaagga 25242
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 320      gtggtgccaccggcggcggc 339
                ||||||||||||||||||||
Sbjct: 25812157 gtggtgccaccggcggcggc 25812138
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>gb|AY524791.1| Verticillium dahliae allergen Asp f2-like protein mRNA, complete
           cds
          Length = 1136

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 gcattggcggtggtggtgcc 327
           ||||||||||||||||||||
Sbjct: 962 gcattggcggtggtggtgcc 943
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 417     tgctggcggtgctgctggtg 436
               ||||||||||||||||||||
Sbjct: 3927717 tgctggcggtgctgctggtg 3927736
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>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0510C12
          Length = 177049

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   gtggtgccaccggcggcggc 339
             ||||||||||||||||||||
Sbjct: 52081 gtggtgccaccggcggcggc 52062
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>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0039G05
          Length = 138429

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    gtggtgccaccggcggcggc 339
              ||||||||||||||||||||
Sbjct: 114621 gtggtgccaccggcggcggc 114602
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>gb|AC115850.11| Mus musculus chromosome 7, clone RP24-252O10, complete sequence
          Length = 161457

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 316   ggtggtggtgccaccggcggcggcggta 343
             |||||||||| || ||||||||||||||
Sbjct: 64740 ggtggtggtggcagcggcggcggcggta 64713
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>gb|AC171680.5| Mus musculus chromosome 7, clone RP23-146B24, complete sequence
          Length = 200031

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      tcttgagggaggaaggcgga 23
              ||||||||||||||||||||
Sbjct: 106870 tcttgagggaggaaggcgga 106889
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>emb|AL671910.9| Mouse DNA sequence from clone RP23-245M12 on chromosome X, complete
              sequence
          Length = 141713

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     tttgctgctgcggagcagag 105
              ||||||||||||||||||||
Sbjct: 115161 tttgctgctgcggagcagag 115180


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,450,441
Number of Sequences: 3902068
Number of extensions: 3450441
Number of successful extensions: 77151
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75789
Number of HSP's gapped (non-prelim): 1362
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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