ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast57h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
2dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
3dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
4gb|AY105889.1| Zea mays PCO106909 mRNA sequence 48 0.023
5ref|XM_475550.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
6gb|BT016325.1| Zea mays clone Contig158 mRNA sequence 42 1.4
7gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
8gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
9gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
12dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
13dbj|AK120637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
14dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
15dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
16dbj|AK071658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
17dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
18dbj|AK066245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
19gb|AY104589.1| Zea mays PCO067801 mRNA sequence 42 1.4
20ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.5
21ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.5
22ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.5
23ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
24ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.5
25ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.5
26ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.5
27ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.5
28gb|BC079323.1| Rattus norvegicus RAB21, member RAS oncogene fami... 40 5.5
29ref|XM_587092.2| PREDICTED: Bos taurus similar to nuclear recept... 40 5.5
30gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complet... 40 5.5
31emb|AL672142.9| Human DNA sequence from clone RP11-101E3 on chro... 40 5.5
32gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence 40 5.5
33dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
34ref|NM_001004238.1| Rattus norvegicus RAB21, member RAS oncogene... 40 5.5
35dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
36dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
37gb|AF164960.1|AF164960 Streptomyces fradiae strain T#2717 urdamy... 40 5.5
38dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
39dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
40dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
41dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
42dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
43dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
44dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
45dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
46gb|DQ184948.1| Malus x domestica putative receptor kinase (DIPM1... 40 5.5
47dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
48gb|AC159020.2| Pan troglodytes BAC clone CH251-530A5 from chromo... 40 5.5 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                             
Query: 324      gtcgtcgtcgggccgccggtgacctaccccacgccgccagtcacc 368
                ||||||||||| |||||||| ||||||||||| || || ||||||
Sbjct: 25843883 gtcgtcgtcggcccgccggtcacctaccccacacctccggtcacc 25843927



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 324      gtcgtcgtcgggccgccggtgacctaccccacgccgcc 361
                ||||||||||| || ||||| |||||||| ||||||||
Sbjct: 25843937 gtcgtcgtcggccctccggtcacctacccgacgccgcc 25843974



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 135      cccaagggccctacctacccgtcgccgg 162
                ||||||||||| ||||||||||| ||||
Sbjct: 25843736 cccaagggccccacctacccgtctccgg 25843763
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>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0416A11
          Length = 171519

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 324    gtcgtcgtcgggccgccggtgacctaccccacgccgccagtcacc 368
              ||||||||||| |||||||| ||||||||||| || || ||||||
Sbjct: 126087 gtcgtcgtcggcccgccggtcacctaccccacacctccggtcacc 126131



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 324    gtcgtcgtcgggccgccggtgacctaccccacgccgcc 361
              ||||||||||| || ||||| |||||||| ||||||||
Sbjct: 126141 gtcgtcgtcggccctccggtcacctacccgacgccgcc 126178



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 135    cccaagggccctacctacccgtcgccgg 162
              ||||||||||| ||||||||||| ||||
Sbjct: 125940 cccaagggccccacctacccgtctccgg 125967
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>dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137N14, full
           insert sequence
          Length = 1338

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 324 gtcgtcgtcgggccgccggtgacctaccccacgccgccagtcacc 368
           ||||||||||| |||||||| ||||||||||| || || ||||||
Sbjct: 428 gtcgtcgtcggcccgccggtcacctaccccacacctccggtcacc 472



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 324 gtcgtcgtcgggccgccggtgacctaccccacgccgcc 361
           ||||||||||| || ||||| |||||||| ||||||||
Sbjct: 482 gtcgtcgtcggccctccggtcacctacccgacgccgcc 519



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 135 cccaagggccctacctacccgtcgccgg 162
           ||||||||||| ||||||||||| ||||
Sbjct: 281 cccaagggccccacctacccgtctccgg 308
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>gb|AY105889.1| Zea mays PCO106909 mRNA sequence
          Length = 1420

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 186 ccgccggtcgtcggcccgccgaagggccacctcccgcgcccgccggtc 233
           |||||||||||||| || || ||||||| | || ||||||||||||||
Sbjct: 372 ccgccggtcgtcggtcctcccaagggccccgtcacgcgcccgccggtc 419



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 189 ccggtcgtcggcccgccgaagggccacctcccgcgcccgcc 229
           |||||||||||||| || ||||||| | || ||||||||||
Sbjct: 321 ccggtcgtcggccctcccaagggccccgtcacgcgcccgcc 361
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>ref|XM_475550.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2316

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 28   ccgccgtcgcggcgcccgcca 48
            |||||||||||||||||||||
Sbjct: 1060 ccgccgtcgcggcgcccgcca 1040
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>gb|BT016325.1| Zea mays clone Contig158 mRNA sequence
          Length = 1172

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 15  ctgctcctcaccaccgccgtc 35
           |||||||||||||||||||||
Sbjct: 287 ctgctcctcaccaccgccgtc 307
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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16,
              complete sequence
          Length = 170233

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 15     ctgctcctcaccaccgccgtc 35
              |||||||||||||||||||||
Sbjct: 149546 ctgctcctcaccaccgccgtc 149526
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>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    ctgctcctcaccaccgccgtc 35
             |||||||||||||||||||||
Sbjct: 46909 ctgctcctcaccaccgccgtc 46889
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>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0079L11, complete sequence
          Length = 124104

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    ccgccgtcgcggcgcccgcca 48
             |||||||||||||||||||||
Sbjct: 57051 ccgccgtcgcggcgcccgcca 57031
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 15       ctgctcctcaccaccgccgtc 35
                |||||||||||||||||||||
Sbjct: 19446197 ctgctcctcaccaccgccgtc 19446177



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 28      ccgccgtcgcggcgcccgcca 48
               |||||||||||||||||||||
Sbjct: 1395389 ccgccgtcgcggcgcccgcca 1395369
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 179     cccgcgcccgccggtcgtcgg 199
               |||||||||||||||||||||
Sbjct: 7875389 cccgcgcccgccggtcgtcgg 7875409



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 218     cccgcgcccgccggtcgtcgg 238
               |||||||||||||||||||||
Sbjct: 7875389 cccgcgcccgccggtcgtcgg 7875409
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>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1066G12
          Length = 136263

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   cccgcgcccgccggtcgtcgg 238
             |||||||||||||||||||||
Sbjct: 70335 cccgcgcccgccggtcgtcgg 70355



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 179   cccgcgcccgccggtcgtcgg 199
             |||||||||||||||||||||
Sbjct: 70335 cccgcgcccgccggtcgtcgg 70355
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>dbj|AK120637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K02, full
            insert sequence
          Length = 2511

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 28   ccgccgtcgcggcgcccgcca 48
            |||||||||||||||||||||
Sbjct: 1070 ccgccgtcgcggcgcccgcca 1050
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>dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D07, full
           insert sequence
          Length = 1060

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 15  ctgctcctcaccaccgccgtc 35
           |||||||||||||||||||||
Sbjct: 279 ctgctcctcaccaccgccgtc 299
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>dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A08, full
           insert sequence
          Length = 1060

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 15  ctgctcctcaccaccgccgtc 35
           |||||||||||||||||||||
Sbjct: 279 ctgctcctcaccaccgccgtc 299
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>dbj|AK071658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102N05, full
           insert sequence
          Length = 703

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 218 cccgcgcccgccggtcgtcgg 238
           |||||||||||||||||||||
Sbjct: 153 cccgcgcccgccggtcgtcgg 173



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 179 cccgcgcccgccggtcgtcgg 199
           |||||||||||||||||||||
Sbjct: 153 cccgcgcccgccggtcgtcgg 173
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>dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E14, full
           insert sequence
          Length = 1106

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 15  ctgctcctcaccaccgccgtc 35
           |||||||||||||||||||||
Sbjct: 280 ctgctcctcaccaccgccgtc 300
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>dbj|AK066245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051L10, full
           insert sequence
          Length = 2539

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 218 cccgcgcccgccggtcgtcgg 238
           |||||||||||||||||||||
Sbjct: 152 cccgcgcccgccggtcgtcgg 172



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 179 cccgcgcccgccggtcgtcgg 199
           |||||||||||||||||||||
Sbjct: 152 cccgcgcccgccggtcgtcgg 172
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>gb|AY104589.1| Zea mays PCO067801 mRNA sequence
          Length = 1197

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 15  ctgctcctcaccaccgccgtc 35
           |||||||||||||||||||||
Sbjct: 333 ctgctcctcaccaccgccgtc 353
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>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1062

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 53 caccaccgccgtcgcggcgc 72
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>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 54 caccaccgccgtcgcggcgc 73
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>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1058

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 56 caccaccgccgtcgcggcgc 75
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>ref|XM_478841.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 59 caccaccgccgtcgcggcgc 78
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>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1061

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 59 caccaccgccgtcgcggcgc 78
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>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 60 caccaccgccgtcgcggcgc 79
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>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1069

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 60 caccaccgccgtcgcggcgc 79
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>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 63 caccaccgccgtcgcggcgc 82
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>gb|BC079323.1| Rattus norvegicus RAB21, member RAS oncogene family, mRNA (cDNA
           clone MGC:94502 IMAGE:7135453), complete cds
          Length = 1515

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 23  caccaccgccgtcgcggcgcccgc 46
           ||||||||||| ||||||||||||
Sbjct: 174 caccaccgccgccgcggcgcccgc 151
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>ref|XM_587092.2| PREDICTED: Bos taurus similar to nuclear receptor co-repressor 2
            (LOC510013), partial mRNA
          Length = 3710

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  cgccggccacctaccccgcg 392
            ||||||||||||||||||||
Sbjct: 2658 cgccggccacctaccccgcg 2677
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>gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complete sequence
          Length = 161566

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      ccctcctcctgctcctcacc 26
              ||||||||||||||||||||
Sbjct: 148852 ccctcctcctgctcctcacc 148833
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>emb|AL672142.9| Human DNA sequence from clone RP11-101E3 on chromosome 9 Contains the
             5' end of the CCBL1 gene for cysteine conjugate-beta
             lyase; cytoplasmic (glutamine  transaminase K, kyneurenine
             aminotransferase),  the LRRC8 gene for leucine-rich
             repeat-containing 8, the PHYHD1 gene for phytanoyl-CoA
             dioxygenase domain containing 1, the TMEM15 gene for
             transmembrane protein 15, the 5' end of the NUP188 gene
             for nucleoporin 188kDa and three CpG islands, complete
             sequence
          Length = 132179

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     ccctcctcctgctcctcacc 26
             ||||||||||||||||||||
Sbjct: 24497 ccctcctcctgctcctcacc 24478
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>gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence
          Length = 164663

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     tcctcctgctcctcaccacc 29
              ||||||||||||||||||||
Sbjct: 120039 tcctcctgctcctcaccacc 120020
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 23       caccaccgccgtcgcggcgc 42
                ||||||||||||||||||||
Sbjct: 23304271 caccaccgccgtcgcggcgc 23304290
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>ref|NM_001004238.1| Rattus norvegicus RAB21, member RAS oncogene family (Rab21), mRNA
          Length = 1515

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 23  caccaccgccgtcgcggcgcccgc 46
           ||||||||||| ||||||||||||
Sbjct: 174 caccaccgccgccgcggcgcccgc 151
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>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1065_B06
          Length = 113170

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    caccaccgccgtcgcggcgc 42
             ||||||||||||||||||||
Sbjct: 59529 caccaccgccgtcgcggcgc 59548
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>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08,
          full insert sequence
          Length = 1088

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 74 caccaccgccgtcgcggcgc 93
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>gb|AF164960.1|AF164960 Streptomyces fradiae strain T#2717 urdamycin biosynthetic gene
            cluster, partial sequence
          Length = 8018

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 14   cctgctcctcaccaccgccgtcgc 37
            ||||||||||| ||||||||||||
Sbjct: 4102 cctgctcctcatcaccgccgtcgc 4125
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>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06,
          full insert sequence
          Length = 1069

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 60 caccaccgccgtcgcggcgc 79
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>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01,
          full insert sequence
          Length = 1065

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 60 caccaccgccgtcgcggcgc 79
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>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full
           insert sequence
          Length = 1080

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  caccaccgccgtcgcggcgc 42
           ||||||||||||||||||||
Sbjct: 90  caccaccgccgtcgcggcgc 109
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>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02,
          full insert sequence
          Length = 1058

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 56 caccaccgccgtcgcggcgc 75
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>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10,
          full insert sequence
          Length = 1061

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 59 caccaccgccgtcgcggcgc 78
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>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05,
          full insert sequence
          Length = 1062

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 53 caccaccgccgtcgcggcgc 72
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>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03,
          full insert sequence
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 54 caccaccgccgtcgcggcgc 73
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>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06,
          full insert sequence
          Length = 1646

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 54 caccaccgccgtcgcggcgc 73
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>gb|DQ184948.1| Malus x domestica putative receptor kinase (DIPM1) mRNA, complete
          cds
          Length = 2440

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 8  cctcctcctgctcctcaccaccgccgtc 35
          ||||||||| |||||| |||||||||||
Sbjct: 58 cctcctcctcctcctcgccaccgccgtc 85
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>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01,
          full insert sequence
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 caccaccgccgtcgcggcgc 42
          ||||||||||||||||||||
Sbjct: 63 caccaccgccgtcgcggcgc 82
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>gb|AC159020.2| Pan troglodytes BAC clone CH251-530A5 from chromosome unknown, complete
              sequence
          Length = 219428

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      ccctcctcctgctcctcacc 26
              ||||||||||||||||||||
Sbjct: 108832 ccctcctcctgctcctcacc 108851


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,882,794
Number of Sequences: 3902068
Number of extensions: 1882794
Number of successful extensions: 58814
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58518
Number of HSP's gapped (non-prelim): 296
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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