ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast57g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RFIP3_HUMAN (O75154) Rab11 family-interacting protein 3 (Rab11-F... 34 0.13
2CSP_PLACB (P08672) Circumsporozoite protein precursor (CS) 32 0.64
3CAPP2_CHLRE (Q6R2V6) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1... 32 0.83
4PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein ... 31 1.4
5CB029_HUMAN (Q9UKZ1) Protein C2orf29 31 1.4
6AMOL2_HUMAN (Q9Y2J4) Angiomotin-like protein 2 (Leman coiled-coi... 31 1.4
7NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified i... 30 1.9
8GUN5_TRIRE (P43317) Endoglucanase-5 precursor (EC 3.2.1.4) (Endo... 30 1.9
9FOXD1_HUMAN (Q16676) Forkhead box protein D1 (Forkhead-related p... 30 2.4
10CYSP7_DICDI (Q94504) Cysteine proteinase 7 precursor (EC 3.4.22.... 30 2.4
11NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified i... 30 3.2
12YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific... 30 3.2
13PKSC_STRCO (Q9S2C0) Serine/threonine protein kinase pksC (EC 2.7... 29 4.1
14CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (C... 29 4.1
15RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-) 29 4.1
16OPAP_DROME (P23488) Male-specific opa-containing protein precurs... 29 4.1
17SYFA_THEFY (Q47N75) Phenylalanyl-tRNA synthetase alpha chain (EC... 29 5.4
18MSA2_PLAFG (P19260) Merozoite surface antigen 2 precursor (MSA-2... 29 5.4
19ERMA_ARTS3 (P09891) rRNA adenine N-6-methyltransferase (EC 2.1.1... 29 5.4
20IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2 29 5.4
21SAP30_HUMAN (O75446) Histone deacetylase complex subunit SAP30 (... 29 5.4
22AMOL2_MOUSE (Q8K371) Angiomotin-like protein 2 29 5.4
23CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family m... 29 5.4
24IF2_DESVH (Q72ER1) Translation initiation factor IF-2 28 7.1
25VIV1_MAIZE (P26307) Regulatory protein viviparous-1 28 7.1
26VE2_HPV36 (P50809) Regulatory protein E2 28 7.1
27FXR1_DROME (Q9NFU0) Fragile X mental retardation syndrome-relate... 28 7.1
28SIRT1_HUMAN (Q96EB6) NAD-dependent deacetylase sirtuin-1 (EC 3.5... 28 7.1
29YBOX2_HUMAN (Q9Y2T7) Y-box-binding protein 2 (Germ cell-specific... 28 7.1
30PHK_RHOPA (Q6N976) Probable phosphoketolase (EC 4.1.2.-) 28 7.1
31Y930_LEIXX (Q6AFM6) UPF0182 protein Lxx09300 28 9.2
32CNOT3_MOUSE (Q8K0V4) CCR4-NOT transcription complex subunit 3 (C... 28 9.2
33GRP2B_ARATH (Q38896) Glycine-rich protein 2b (AtGRP2b) 28 9.2
34ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing prote... 28 9.2
35FUSB_BURCE (P24127) Fusaric acid resistance protein fusB 28 9.2
36CTG1B_HUMAN (P78358) Cancer/testis antigen 1B (L antigen family ... 28 9.2
37CSP_PLAVB (P08677) Circumsporozoite protein precursor (CS) 28 9.2
38PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precur... 28 9.2

>RFIP3_HUMAN (O75154) Rab11 family-interacting protein 3 (Rab11-FIP3) (EF|
           hands-containing Rab-interacting protein) (Eferin)
          Length = 756

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = -2

Query: 259 AGAPAASAQQQTGARPPAGNPKASGSSGGGRRQLA-GRAN---GSLVG*RCPRAQATDSS 92
           A AP AS     G+ PP  +P+  G  G G  QLA G A    G+ VG   P++   D  
Sbjct: 2   ASAPPASPP---GSEPPGPDPEPGGPDGPGAAQLAPGPAELRLGAPVGGPDPQSPGLDEP 58

Query: 91  SYGCAAGGRPR 59
           + G AA G  R
Sbjct: 59  APGAAADGGAR 69



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>CSP_PLACB (P08672) Circumsporozoite protein precursor (CS)|
          Length = 378

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 19/63 (30%), Positives = 26/63 (41%)
 Frame = -2

Query: 259 AGAPAASAQQQTGARPPAGNPKASGSSGGGRRQLAGRANGSLVG*RCPRAQATDSSSYGC 80
           AG   A+   Q G     G P A G+  GG+    G   G+  G     AQA  +++   
Sbjct: 211 AGGQPAAGGNQAGGNRAGGQPAAGGNQAGGQPAAGGNQAGAQAGGNQAGAQAGGANAGNK 270

Query: 79  AAG 71
            AG
Sbjct: 271 KAG 273



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 20/64 (31%), Positives = 24/64 (37%)
 Frame = -2

Query: 259 AGAPAASAQQQTGARPPAGNPKASGSSGGGRRQLAGRANGSLVG*RCPRAQATDSSSYGC 80
           AG   A+   Q G     G P A G+  GG R     A G   G +     A   +  G 
Sbjct: 195 AGGQPAAGGNQAGGNRAGGQPAAGGNQAGGNRAGGQPAAG---GNQAGGQPAAGGNQAGA 251

Query: 79  AAGG 68
            AGG
Sbjct: 252 QAGG 255



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
 Frame = -2

Query: 256 GAPAASAQQQTGARP-----PAGNPKASGSSGGGRRQLAGRANGSLVG*RCPRAQATDSS 92
           GAPAA A     A P     PAGN      + GG +    RA G        +  A  + 
Sbjct: 170 GAPAAPAGDGAPAAPAGDGAPAGNRAGGQPAAGGNQAGGNRAGG--------QPAAGGNQ 221

Query: 91  SYGCAAGGRP 62
           + G  AGG+P
Sbjct: 222 AGGNRAGGQP 231



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>CAPP2_CHLRE (Q6R2V6) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEP|
           carboxylase 2) (PEPCase 2) (PEPC 2)
          Length = 1221

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
 Frame = -2

Query: 262 NAGAPAASAQQQTGARPPAGNPKASGSSGGGRRQLAGRANG---------SLVG*RCPRA 110
           +A +   SA     A    G+  A G+SGGG    AG A           S +G   P  
Sbjct: 350 DAASHGGSAASAAAAAAAGGDVVADGTSGGGAAAAAGPAAAAAADDAFTFSRLGRPRPER 409

Query: 109 QATDSSSYGCAAGG 68
            +TD  S G  AGG
Sbjct: 410 PSTDVRSVGVLAGG 423



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>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor|
           (PRP-1/PRP-2) (Parotid proline-rich protein 1/2)
           (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa)
           (Parotid isoelectric focusing variant protein) (PIF-S)
           (Parotid double-band
          Length = 166

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -2

Query: 256 GAPAASAQQQTGARPPAGNPKASGSSGGGRRQLAGRANG 140
           G P    QQQ G  PP G P+     GG      GR  G
Sbjct: 72  GPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQG 110



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>CB029_HUMAN (Q9UKZ1) Protein C2orf29|
          Length = 510

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
 Frame = -2

Query: 256 GAPAAS-----AQQQTGARPPAGNPKAS--GSSGGGRRQLAGRANGS 137
           GA AAS     A +Q G+R  AG+   S  G SGGGR   +G  +GS
Sbjct: 5   GASAASGRLLTAAEQRGSREAAGSASRSGFGGSGGGRGGASGPGSGS 51



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>AMOL2_HUMAN (Q9Y2J4) Angiomotin-like protein 2 (Leman coiled-coil protein)|
           (LCCP)
          Length = 779

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -2

Query: 238 AQQQTGARPPAGNPKASGSSGGGRRQ 161
           A QQ G RP AG+    G+ GG RRQ
Sbjct: 118 AAQQAGTRPHAGDRDPRGAPGGSRRQ 143



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>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer|
           protein 3) (Cancer-amplified transcriptional coactivator
           ASC-2) (Activating signal cointegrator 2) (ASC-2)
           (Peroxisome proliferator-activated receptor-interacting
           protein) (P
          Length = 2067

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 12/79 (15%)
 Frame = -2

Query: 256 GAPAAS-----AQQQTGARPPAGNPKASG----SSGGGRRQLAGRAN---GSLVG*RCPR 113
           G+PA+S      QQQ G RPP  NP + G     S  GR  +  + N     +V  + P 
Sbjct: 442 GSPASSPTVNQTQQQMGPRPPQNNPLSQGFQQPVSSPGRNPMVQQGNVPPNFMVMQQQPP 501

Query: 112 AQATDSSSYGCAAGGRPRR 56
            Q   S   G   GG P+R
Sbjct: 502 NQGPQSLHPG--LGGMPKR 518



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>GUN5_TRIRE (P43317) Endoglucanase-5 precursor (EC 3.2.1.4) (Endoglucanase V)|
           (Endo-1,4-beta-glucanase V) (Cellulase V) (EG V)
          Length = 242

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -2

Query: 250 PAASAQQQTGARPPAGNPKASGS---SGGGRRQLAGRANGS 137
           P       TG+ PP  +P A+ S   SGGG++ L G+  G+
Sbjct: 176 PTPVLGNDTGSTPPGSSPPATSSSPPSGGGQQTLYGQCGGA 216



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>FOXD1_HUMAN (Q16676) Forkhead box protein D1 (Forkhead-related protein FKHL8)|
           (Forkhead-related transcription factor 4) (FREAC-4)
          Length = 465

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -2

Query: 259 AGAPAASAQQQTGARPPAGNPKASGSSGGG 170
           A A AA+A Q + +  P   P A GSSGGG
Sbjct: 380 AAAQAAAAAQASPSPSPVAAPPAPGSSGGG 409



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>CYSP7_DICDI (Q94504) Cysteine proteinase 7 precursor (EC 3.4.22.-) (Proteinase|
           1)
          Length = 460

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 22/60 (36%), Positives = 32/60 (53%)
 Frame = -2

Query: 247 AASAQQQTGARPPAGNPKASGSSGGGRRQLAGRANGSLVG*RCPRAQATDSSSYGCAAGG 68
           + +A +QTGA   +G+   SG SG G   ++G A+GS  G       A+ SSS   + GG
Sbjct: 358 SGAAVKQTGAGSGSGSGSGSG-SGSGSGSVSGSASGSASG------SASGSSSGSNSNGG 410



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>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer|
           protein 3) (Cancer-amplified transcriptional coactivator
           ASC-2) (Activating signal cointegrator 2) (ASC-2)
           (Peroxisome proliferator-activated receptor-interacting
           protein) (P
          Length = 2063

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 12/79 (15%)
 Frame = -2

Query: 256 GAPAAS-----AQQQTGARPPAGNPKASG----SSGGGRRQLAGRAN---GSLVG*RCPR 113
           G+PA+S      QQQ G RPP  NP   G     S  GR  +  + N     +V  + P 
Sbjct: 438 GSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMVQQGNVPPNFMVMQQQPP 497

Query: 112 AQATDSSSYGCAAGGRPRR 56
            Q   S   G   GG P+R
Sbjct: 498 NQGPQSLHPG--LGGMPKR 514



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>YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific Y-box-binding|
           protein) (FRGY2 homolog)
          Length = 360

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = -2

Query: 259 AGAPAASAQQQTGARP-PAGNP-KASGSSGGGRRQLAGRANGSLV---G*RCPRAQATDS 95
           A  PA +A       P PAG P KA G +GGG    +G A G+ +   G R P  QAT +
Sbjct: 16  ATVPATAAGVVAVVVPVPAGEPQKAGGGAGGGGGAASGPAAGTPLHAPGPRTPGNQATAA 75

Query: 94  S 92
           S
Sbjct: 76  S 76



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>PKSC_STRCO (Q9S2C0) Serine/threonine protein kinase pksC (EC 2.7.11.1)|
          Length = 556

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -2

Query: 253 APAASAQQQTGARPPAGN--PKASGSSGG 173
           APA  AQQQ  A PP  N  P A GS  G
Sbjct: 370 APAPYAQQQAAATPPPYNLTPSAQGSGSG 398



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>CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (CCR4-associated|
           factor 3)
          Length = 753

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = -2

Query: 250 PAASAQQQTGARPPAGNPKASGSSGGGRRQLAGRANGSLVG*RCPRAQATDSSS 89
           PA S    T  RPP+  P   G  G G    +  +N S  G    +  AT  SS
Sbjct: 378 PAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGGAGKQNGATSYSS 431



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>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 574

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 24/72 (33%), Positives = 31/72 (43%)
 Frame = -2

Query: 247 AASAQQQTGARPPAGNPKASGSSGGGRRQLAGRANGSLVG*RCPRAQATDSSSYGCAAGG 68
           AA  Q++ G R   G    SGS GG R   +  A+G     R PR +         AA  
Sbjct: 426 AAEEQRRGGGRSGPGGGSRSGSGGGRRDGASAGADGKPRPRRKPRVEGE-----APAAAA 480

Query: 67  RPRREV*AAAMA 32
           +  + V AAA A
Sbjct: 481 QTEKPVVAAAAA 492



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>OPAP_DROME (P23488) Male-specific opa-containing protein precursor (Protein|
           dromsopa)
          Length = 83

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 259 AGAPAASAQQQTGARPPAGNPKASGSSGGGRRQ 161
           A  PAA+A       PPA  P+A+ + G GR++
Sbjct: 41  AAPPAAAAAPPAPPAPPAAAPQAAPAGGSGRKK 73



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>SYFA_THEFY (Q47N75) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 372

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 253 APAASAQQQTGARPPAGNPKASGSSGGGRRQL 158
           +P A A ++ GA PPA    A    GG RR++
Sbjct: 53  SPLALANREIGALPPAARADAGRRVGGARREV 84



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>MSA2_PLAFG (P19260) Merozoite surface antigen 2 precursor (MSA-2) (Allelic|
           form 2) (Membrane protein PF7)
          Length = 287

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = -2

Query: 235 QQQTGARPPAGNPKASGSSGGGRRQLAGRANGSLVG*RCPRAQATDSSSYGCAAGG 68
           +  T + PP G   ++G S GG     G A GS  G     A  +   S G +AGG
Sbjct: 41  RSMTESNPPTGASGSAGGSAGG--SAGGSAGGSAGGSAGGSAGGSAGGSAGGSAGG 94



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>ERMA_ARTS3 (P09891) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)|
           (Macrolide-lincosamide-streptogramin B resistance
           protein) (Erythromycin resistance protein)
          Length = 340

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = -2

Query: 256 GAPAASAQQQTGARP-PAGNPKASGSSGGG-RRQLAGRANG 140
           G  A     Q G R  P G P+  G +GGG RR   GR  G
Sbjct: 285 GGAARGPGDQRGRRGRPGGGPRPDGRAGGGPRRDAGGRRTG 325



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>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 23/66 (34%), Positives = 25/66 (37%)
 Frame = -2

Query: 256 GAPAASAQQQTGARPPAGNPKASGSSGGGRRQLAGRANGSLVG*RCPRAQATDSSSYGCA 77
           GAPA     + G   P  NP  SG + G  R  A R  G       PR         G A
Sbjct: 203 GAPAQRPGGRPGGPRPGNNPFTSGGNAGMARPSAPRPQGG------PR-----PGGPGGA 251

Query: 76  AGGRPR 59
            GG PR
Sbjct: 252 PGGGPR 257



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>SAP30_HUMAN (O75446) Histone deacetylase complex subunit SAP30 (Sin3-associated|
           polypeptide, 30 kDa) (Sin3 corepressor complex subunit
           SAP30)
          Length = 220

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 25/62 (40%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
 Frame = -2

Query: 259 AGAPAASAQQQTGARPPAGNPKASGSSGGGRRQLAGRANGSLV-----G*RCPRAQATDS 95
           A A AASA   TGA   A  P A   S  G    AG   G L      G RC RA    S
Sbjct: 25  AAAAAASAGNGTGAGTGAEVPGAGAVSAAGPPGAAGPGPGQLCCLREDGERCGRAAGNAS 84

Query: 94  SS 89
            S
Sbjct: 85  FS 86



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>AMOL2_MOUSE (Q8K371) Angiomotin-like protein 2|
          Length = 772

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 238 AQQQTGARPPAGN-PKASGSSGGGRRQ 161
           A QQ G+RP  G+     G SGGGRRQ
Sbjct: 118 AAQQAGSRPHVGDRDPRGGVSGGGRRQ 144



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>CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family member 1)|
           (LAGE-1 protein) (ESO-2 protein)
          Length = 210

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -2

Query: 262 NAGAPAASAQQQTGARPP--AGNPKASGSSGGGRRQLAGRANGSLVG*RCP 116
           NAG P  +    TG R P  AG  +ASG  GG  R   G A  +  G RCP
Sbjct: 30  NAGGPGEAGA--TGGRGPRGAGAARASGPRGGAPRGPHGGAASAQDG-RCP 77



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>IF2_DESVH (Q72ER1) Translation initiation factor IF-2|
          Length = 1079

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
 Frame = -2

Query: 259 AGAPAASAQQQTGARPPAGNPKASGSSGGGRRQLAGRANGSL--VG*RCPRAQATDSSSY 86
           AG P    Q++ G RP A  P+      GG  +  G+  G     G       A     +
Sbjct: 365 AGGPRPEGQREGGYRPGAPRPEGGYRPAGGAPRPEGQREGGYRPAGGPPRPGGAPRPGGF 424

Query: 85  GCAAGGRP 62
           G A GG P
Sbjct: 425 GGAPGGMP 432



 Score = 28.1 bits (61), Expect = 9.2
 Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = -2

Query: 250 PAASAQQQTGARPPAGNPKASGSSGGGRRQLAG-RANGSLVG*RCPRAQATDSSSYGCAA 74
           PAA AQQQ   +      +A G   GG+R   G R  G   G   P  Q       G   
Sbjct: 275 PAAVAQQQMQQQAAQQQREAGGYRPGGQRPEGGYRPEGQREGGYRPEGQREG----GYRP 330

Query: 73  GGRPRRE 53
           GG PR E
Sbjct: 331 GGAPRPE 337



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>VIV1_MAIZE (P26307) Regulatory protein viviparous-1|
          Length = 691

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
 Frame = -2

Query: 217 RPPAGNPKASGSSGGGRRQ---LAGRANGSLVG*RCPRAQATDSSSYGCAA----GGRPR 59
           RPP    + SGSSGGG+ +    AG    +  G   P     D  S  C      G R  
Sbjct: 619 RPPPAQEQGSGSSGGGKHRPLCPAGPERAAAAG--APEDAVVDGVSGACKGRSPEGVRRV 676

Query: 58  REV*AAAMANL 26
           R+  A AM+ +
Sbjct: 677 RQQGAGAMSQM 687



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>VE2_HPV36 (P50809) Regulatory protein E2|
          Length = 509

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 232 QQTGARPPAGNPKASGSSGGGRRQLAGRANGS 137
           + TG+R   G   A G SGGGRR+  GR++ S
Sbjct: 349 ETTGSRGARGGRGARGGSGGGRRR--GRSSSS 378



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>FXR1_DROME (Q9NFU0) Fragile X mental retardation syndrome-related protein 1|
           (dFMR1) (dfxr)
          Length = 684

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 241 SAQQQTGARPPAGNPKASGSSGGGRRQLAGRANGS 137
           SAQQ    +PPA   KA+ ++G   +Q +G AN +
Sbjct: 575 SAQQPQQQQPPAPGNKAALNAGDASKQNSGNANAA 609



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>SIRT1_HUMAN (Q96EB6) NAD-dependent deacetylase sirtuin-1 (EC 3.5.1.-) (hSIRT1)|
           (hSIR2) (SIR2-like protein 1)
          Length = 747

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 19/92 (20%)
 Frame = -2

Query: 256 GAPAASAQQQTGARPPAGNP-------------KASGSSGGG--RRQLAGRANGSLVG*R 122
           G+P+A+   +  A  PAG P             ++ G  GG    R++   A G      
Sbjct: 13  GSPSAAGADREAASSPAGEPLRKRPRRDGPGLERSPGEPGGAAPEREVPAAARG------ 66

Query: 121 CPRAQAT----DSSSYGCAAGGRPRREV*AAA 38
           CP A A     ++ +   AAGG    +  AAA
Sbjct: 67  CPGAAAAALWREAEAEAAAAGGEQEAQATAAA 98



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>YBOX2_HUMAN (Q9Y2T7) Y-box-binding protein 2 (Germ cell-specific Y-box-binding|
           protein) (Contrin) (MSY2 homolog)
          Length = 364

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = -2

Query: 259 AGAPAASAQQQTGARP-PAGNPKASGSSGGGRRQLAGRANG--SLVG*RCPRAQAT 101
           A  PA +A       P PAG P+  G +GGG    +G A G  S  G R P   AT
Sbjct: 16  ATVPATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSAPGSRTPGNPAT 71



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>PHK_RHOPA (Q6N976) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 783

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 350 LHLPELVDLRDAATRRHW 297
           L +P L D RDAAT R+W
Sbjct: 739 LRIPRLADQRDAATSRYW 756



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>Y930_LEIXX (Q6AFM6) UPF0182 protein Lxx09300|
          Length = 987

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 250  PAASAQQQTGARPPAGNPKASGSSGGGRRQLAGRANGS 137
            PA       G+   AG+    GSSGGG     G ++GS
Sbjct: 893  PATPGGSGGGSSGDAGSSAGGGSSGGGGSSAGGSSSGS 930



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>CNOT3_MOUSE (Q8K0V4) CCR4-NOT transcription complex subunit 3 (CCR4-associated|
           factor 3)
          Length = 751

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 19/54 (35%), Positives = 23/54 (42%)
 Frame = -2

Query: 250 PAASAQQQTGARPPAGNPKASGSSGGGRRQLAGRANGSLVG*RCPRAQATDSSS 89
           P AS       RPP+  P  SG SGGG    +  +N    G    +  AT  SS
Sbjct: 378 PNASGPSNAQPRPPSAQP--SGGSGGGSGGSSSNSNSGTGGGAGKQNGATSYSS 429



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>GRP2B_ARATH (Q38896) Glycine-rich protein 2b (AtGRP2b)|
          Length = 201

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 25/82 (30%), Positives = 29/82 (35%), Gaps = 12/82 (14%)
 Frame = -2

Query: 262 NAGAPAASAQQQTGARPPAGNPKASGSS------GGGRRQLAGRANGSLVG*RCPRAQ-- 107
           N+G P A         P  GN    GSS      GGG  +  GR  GS  G    R    
Sbjct: 69  NSGRPKAIEVSGPDGAPVQGNSGGGGSSGGRGGFGGGGGRGGGRGGGSYGGGYGGRGSGG 128

Query: 106 ----ATDSSSYGCAAGGRPRRE 53
                 D+S + C   G   RE
Sbjct: 129 RGGGGGDNSCFKCGEPGHMARE 150



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>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID|
           domain-containing protein 1B) (Osa homolog 2) (hOsa2)
           (p250R) (BRG1-binding protein hELD/OSA1)
           (BRG1-associated factor 250b) (BAF250B)
          Length = 2236

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
 Frame = -2

Query: 256 GAPAASAQQQTG-ARPPAGNPKASGSSGGGRRQLAGRANGSLVG*RCPRAQATDSSSYGC 80
           G P +      G +RP AG     G  GGG     G   G+  G     A A  +++   
Sbjct: 289 GYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAA 348

Query: 79  AAGG 68
           AAGG
Sbjct: 349 AAGG 352



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>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB|
          Length = 142

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
 Frame = -2

Query: 247 AASAQQQTGARPPA---GNPKASGSSGGGRRQLAGRANGSLVG*RC----PRAQATDSSS 89
           AA   ++     PA   G+ + S SSG  R   +     S  G RC    PRA AT + +
Sbjct: 73  AAPCSRKASTGSPARSSGSSRRSRSSGCSRSSRSCSCWRSPCGSRCAPPAPRATATSAVT 132

Query: 88  YGCAAGGRPR 59
             C+   RPR
Sbjct: 133 ASCSPAIRPR 142



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>CTG1B_HUMAN (P78358) Cancer/testis antigen 1B (L antigen family member 2)|
           (LAGE-2 protein) (Autoimmunogenic cancer/testis antigen
           NY-ESO-1)
          Length = 180

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = -2

Query: 262 NAGAPAASAQQQTGARPP--AGNPKASGSSGGGRRQLAGRANGSLVG*RCPRAQATDSSS 89
           NAG P  +    TG R P  AG  +ASG  GG  R   G A   L G  C R  A    S
Sbjct: 30  NAGGPGEAGA--TGGRGPRGAGAARASGPGGGAPRGPHGGAASGLNG--CCRCGARGPES 85



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>CSP_PLAVB (P08677) Circumsporozoite protein precursor (CS)|
          Length = 378

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
 Frame = -2

Query: 259 AGAPAASAQQQTGARPPAGNPKASGSSGGGRRQL---AGRANGSLVG*RCPRAQATDSS- 92
           AG PA        A   AG   A G++GGG+ Q    A   N   V     + +AT  + 
Sbjct: 253 AGQPAGDRAAGQPAGNGAGGQAAGGNAGGGQGQNNEGANAPNEKSVKEYLDKVRATVGTE 312

Query: 91  ----SYGCAAGGRPRREV*AA 41
               S  C  G R RR V AA
Sbjct: 313 WTPCSVTCGVGVRVRRRVNAA 333



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>PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precursor (Salivary|
           proline-rich protein) [Contains: Basic peptide IB-6;
           Peptide P-H]
          Length = 392

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
 Frame = -2

Query: 256 GAPAASAQQQTGARPPAGNPKASGSSGGGRRQ---LAGRANGSLVG*RCPRAQATDSSSY 86
           G P     Q  G  PP G P+     GG + Q     G+  G       P AQ    S  
Sbjct: 282 GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG-------PPAQGGSKSQS 334

Query: 85  GCAAGGRPR 59
             A  G+P+
Sbjct: 335 ARAPPGKPQ 343


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,457,121
Number of Sequences: 219361
Number of extensions: 355251
Number of successful extensions: 2378
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 2064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2352
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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