ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast57g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BC106080.1| Homo sapiens high-mobility group nucleosome bindi... 44 0.37
2emb|AL163279.2|HS21C079 Homo sapiens chromosome 21 segment HS21C079 44 0.37
3gb|AC094014.3| Papio anubis clone RP41-371B12, complete sequence 44 0.37
4emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 44 0.37
5gb|AF064861.5| Homo sapiens chromosome 21 clone RP1-128M19 map q... 44 0.37
6emb|CR625629.1| full-length cDNA clone CS0DC009YF14 of Neuroblas... 44 0.37
7emb|CR597521.1| full-length cDNA clone CS0DA009YD09 of Neuroblas... 44 0.37
8gb|AC087441.9| Homo sapiens chromosome 11, clone RP11-438N5, com... 44 0.37
9gb|AC107970.4| Homo sapiens chromosome 11, clone CTD-2238L16, co... 44 0.37
10gb|AC157524.2| Pan troglodytes BAC clone CH251-516K17 from chrom... 44 0.37
11ref|XM_938941.1| PREDICTED: Homo sapiens similar to Nonhistone c... 44 0.37
12ref|XM_927071.1| PREDICTED: Homo sapiens similar to Nonhistone c... 44 0.37
13ref|NM_004965.6| Homo sapiens high-mobility group nucleosome bin... 44 0.37
14gb|AC012478.18| Homo sapiens chromosome 15 clone RP11-386M24, co... 44 0.37
15gb|AC008753.9| Homo sapiens chromosome 19 clone CTD-3022G6, comp... 44 0.37
16gb|AC091544.11| Homo sapiens chromosome 15, clone RP11-386M24, c... 44 0.37
17dbj|BS000156.1| Pan troglodytes chromosome 22 clone:RP43-145H09,... 44 0.37
18emb|AJ333611.1|HSA333611 Homo sapiens genomic sequence surroundi... 44 0.37
19emb|AJ335216.1|HSA335216 Homo sapiens genomic sequence surroundi... 44 0.37
20emb|AL954225.2|PTB448G23 Pan troglodytes chromosome 22 BAC PTB-4... 44 0.37
21gb|BC107741.1| Homo sapiens high-mobility group nucleosome bindi... 44 0.37
22gb|BC070153.1| Homo sapiens high-mobility group nucleosome bindi... 44 0.37
23dbj|AB209245.1| Homo sapiens mRNA for Hypothetical protein FLJ31... 44 0.37
24emb|AL773538.7| Mouse DNA sequence from clone RP23-14I24 on chro... 44 0.37
25gb|M21339.1|HUMHMG14A Human non-histone chromosomal protein HMG-... 44 0.37
26gb|J02621.1|HUMHMG14 Human non-histone chromosomal protein HMG-1... 44 0.37
27gb|AE010358.1| Methanopyrus kandleri AV19 section 57 of 157 of t... 42 1.5
28ref|XM_476454.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
29gb|CP000147.1| Rhodobacter sphaeroides 2.4.1 plasmid D, complete... 42 1.5
30gb|AY657625.1| Synthetic construct Peudomonas aeruginosa clone F... 42 1.5
31gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell... 42 1.5
32gb|AC010037.7| Drosophila melanogaster 3L BAC RP98-6E4 (Roswell ... 42 1.5
33ref|NM_168260.1| Drosophila melanogaster CG13679-RB, transcript ... 42 1.5
34ref|NM_139936.1| Drosophila melanogaster CG13678-RA (CG13678), mRNA 42 1.5
35ref|NM_139933.1| Drosophila melanogaster CG13679-RA, transcript ... 42 1.5
36gb|AC104448.2| Homo sapiens chromosome 3 clone RP11-24C3, comple... 42 1.5
37gb|AC093891.3| Homo sapiens BAC clone RP11-691E1 from 4, complet... 42 1.5
38gb|AY071202.1| Drosophila melanogaster RE24439 full length cDNA 42 1.5
39gb|AY071121.1| Drosophila melanogaster RE17113 full length cDNA 42 1.5
40gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.5
41gb|AY129335.1| Mycobacteriophage Corndog, complete genome 42 1.5
42dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
43gb|AE004786.1| Pseudomonas aeruginosa PAO1, section 347 of 529 o... 42 1.5
44dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 1.5
45dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
46dbj|AB007867.1| Homo sapiens KIAA0407 mRNA, partial cds 42 1.5
47dbj|AK109848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
48gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29... 42 1.5
49gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 1.5
50gb|AC134772.2| Homo sapiens chromosome 3 clone RP13-794C1, compl... 42 1.5
51gb|U57340.1|MKU57340 Methanopyrus kandleri methyl coenzyme M red... 42 1.5
52dbj|AB024601.1| Pseudomonas aeruginosa dapD gene for tetrahydrod... 42 1.5
53ref|XM_482535.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
54ref|NM_003178.3| Homo sapiens synapsin II (SYN2), transcript var... 40 5.7
55ref|NM_133625.2| Homo sapiens synapsin II (SYN2), transcript var... 40 5.7
56gb|AC158787.14| Mus musculus chromosome 15, clone RP23-136G8, co... 40 5.7
57gb|BC019435.1| Mus musculus caldesmon 1, mRNA (cDNA clone MGC:30... 40 5.7
58gb|BC051307.1| Homo sapiens synapsin II, transcript variant IIa,... 40 5.7
59ref|XM_882934.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 5.7
60ref|NM_201359.1| Mus musculus transmembrane protein 106C (Tmem10... 40 5.7
61ref|XM_536913.2| PREDICTED: Canis familiaris similar to HIRA int... 40 5.7
62emb|AL450304.33| Human DNA sequence from clone RP11-505O17 on ch... 40 5.7
63gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.7
64gb|AY331191.1| Gossypium barbadense clone 53-1 NBS-type resistan... 40 5.7
65gb|AC144400.2| Lemur catta clone LBNL2-87E20, complete sequence 40 5.7
66gb|AC091535.2| Takifugu rubripes clone 241F4, complete sequence 40 5.7
67emb|Y13383.2|BPHYPLCRD Bordetella pertussis DNA for putative pat... 40 5.7
68emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.7
69emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 40 5.7
70emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 5.7
71emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 40 5.7
72gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.7
73ref|NM_145575.1| Mus musculus caldesmon 1 (Cald1), mRNA 40 5.7
74dbj|AK148009.1| Mus musculus melanocyte cDNA, RIKEN full-length ... 40 5.7
75gb|AC018841.4| Homo sapiens chromosome 3 clone RP11-7F24 map 3p,... 40 5.7
76gb|AC153869.7| Mus musculus 6 BAC RP23-386A17 (Roswell Park Canc... 40 5.7
77emb|CR338694.1| Gallus gallus finished cDNA, clone ChEST40l18 40 5.7
78dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
79dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
80dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.7
81gb|BC046621.1| Mus musculus transmembrane protein 106C, mRNA (cD... 40 5.7
82dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
83dbj|AK197986.1| Mus musculus cDNA, clone:Y1G0126M09, strand:plus... 40 5.7
84dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 5.7
85dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
86dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
87dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
88dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
89gb|AC153627.2| Mus musculus 6 BAC RP23-104H13 (Roswell Park Canc... 40 5.7
90emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 5.7
91gb|U40215.1|HSU40215 Human synapsin IIb mRNA, complete cds 40 5.7
92gb|AC134554.6| Mus musculus BAC clone RP24-313F7 from chromosome... 40 5.7
93dbj|AB209088.1| Homo sapiens mRNA for synapsin II isoform IIb va... 40 5.7 
>gb|BC106080.1| Homo sapiens high-mobility group nucleosome binding domain 1, mRNA
           (cDNA clone MGC:117425 IMAGE:3855939), complete cds
          Length = 1247

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 23  ctcctcccgccgcccgagctgc 2
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>emb|AL163279.2|HS21C079 Homo sapiens chromosome 21 segment HS21C079
          Length = 340000

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 165    ctcctcccgccgcccgagctgc 186
              ||||||||||||||||||||||
Sbjct: 193317 ctcctcccgccgcccgagctgc 193338
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>gb|AC094014.3| Papio anubis clone RP41-371B12, complete sequence
          Length = 161946

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 165    ctcctcccgccgcccgagctgc 186
              ||||||||||||||||||||||
Sbjct: 105542 ctcctcccgccgcccgagctgc 105521
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 73     ccgccgcgcacccgtacgacga 94
              ||||||||||||||||||||||
Sbjct: 291540 ccgccgcgcacccgtacgacga 291561
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>gb|AF064861.5| Homo sapiens chromosome 21 clone RP1-128M19 map q22.2, complete
             sequence
          Length = 135578

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 165   ctcctcccgccgcccgagctgc 186
             ||||||||||||||||||||||
Sbjct: 75514 ctcctcccgccgcccgagctgc 75535
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>emb|CR625629.1| full-length cDNA clone CS0DC009YF14 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1536

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 109 ctcctcccgccgcccgagctgc 88
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>emb|CR597521.1| full-length cDNA clone CS0DA009YD09 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1262

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 83  ctcctcccgccgcccgagctgc 62
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>gb|AC087441.9| Homo sapiens chromosome 11, clone RP11-438N5, complete sequence
          Length = 151606

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 165    ctcctcccgccgcccgagctgc 186
              ||||||||||||||||||||||
Sbjct: 113178 ctcctcccgccgcccgagctgc 113199
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>gb|AC107970.4| Homo sapiens chromosome 11, clone CTD-2238L16, complete sequence
          Length = 155365

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 165   ctcctcccgccgcccgagctgc 186
             ||||||||||||||||||||||
Sbjct: 86493 ctcctcccgccgcccgagctgc 86514
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>gb|AC157524.2| Pan troglodytes BAC clone CH251-516K17 from chromosome unknown,
             complete sequence
          Length = 204622

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 165   ctcctcccgccgcccgagctgc 186
             ||||||||||||||||||||||
Sbjct: 82524 ctcctcccgccgcccgagctgc 82503
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>ref|XM_938941.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein
           HMG-14 (High-mobility group nucleosome binding domain 1)
           (LOC649866), mRNA
          Length = 1281

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 83  ctcctcccgccgcccgagctgc 62
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>ref|XM_927071.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein
           HMG-14 (High-mobility group nucleosome binding domain 1)
           (LOC643790), mRNA
          Length = 1281

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 83  ctcctcccgccgcccgagctgc 62
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>ref|NM_004965.6| Homo sapiens high-mobility group nucleosome binding domain 1
           (HMGN1), mRNA
          Length = 1313

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 90  ctcctcccgccgcccgagctgc 69
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>gb|AC012478.18| Homo sapiens chromosome 15 clone RP11-386M24, complete sequence
          Length = 186540

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 165    ctcctcccgccgcccgagctgc 186
              ||||||||||||||||||||||
Sbjct: 140087 ctcctcccgccgcccgagctgc 140066
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>gb|AC008753.9| Homo sapiens chromosome 19 clone CTD-3022G6, complete sequence
          Length = 147330

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 165   ctcctcccgccgcccgagctgc 186
             ||||||||||||||||||||||
Sbjct: 37373 ctcctcccgccgcccgagctgc 37394
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>gb|AC091544.11| Homo sapiens chromosome 15, clone RP11-386M24, complete sequence
          Length = 186674

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 165   ctcctcccgccgcccgagctgc 186
             ||||||||||||||||||||||
Sbjct: 46442 ctcctcccgccgcccgagctgc 46463
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>dbj|BS000156.1| Pan troglodytes chromosome 22 clone:RP43-145H09, map 22, complete
             sequences
          Length = 152714

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 165   ctcctcccgccgcccgagctgc 186
             ||||||||||||||||||||||
Sbjct: 78672 ctcctcccgccgcccgagctgc 78693
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>emb|AJ333611.1|HSA333611 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-CL14RS
          Length = 689

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 145 ctcctcccgccgcccgagctgc 166
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>emb|AJ335216.1|HSA335216 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-DN20RS
          Length = 708

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 145 ctcctcccgccgcccgagctgc 166
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>emb|AL954225.2|PTB448G23 Pan troglodytes chromosome 22 BAC PTB-448G23, complete sequence
          Length = 173384

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 165   ctcctcccgccgcccgagctgc 186
             ||||||||||||||||||||||
Sbjct: 45412 ctcctcccgccgcccgagctgc 45433
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>gb|BC107741.1| Homo sapiens high-mobility group nucleosome binding domain 1, mRNA
           (cDNA clone MGC:104230 IMAGE:6495117), complete cds
          Length = 1353

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 96  ctcctcccgccgcccgagctgc 75
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>gb|BC070153.1| Homo sapiens high-mobility group nucleosome binding domain 1, mRNA
           (cDNA clone MGC:88133 IMAGE:6450636), complete cds
          Length = 808

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 28  ctcctcccgccgcccgagctgc 7
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>dbj|AB209245.1| Homo sapiens mRNA for Hypothetical protein FLJ31471 variant protein
          Length = 4260

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 23  ctcctcccgccgcccgagctgc 2
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>emb|AL773538.7| Mouse DNA sequence from clone RP23-14I24 on chromosome 2, complete
              sequence
          Length = 178544

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 10     cagctcaaaagaaaatcaagtt 31
              ||||||||||||||||||||||
Sbjct: 144271 cagctcaaaagaaaatcaagtt 144250
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>gb|M21339.1|HUMHMG14A Human non-histone chromosomal protein HMG-14 gene, complete cds
          Length = 8882

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 939 ctcctcccgccgcccgagctgc 918
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>gb|J02621.1|HUMHMG14 Human non-histone chromosomal protein HMG-14 mRNA, complete cds
          Length = 1249

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 165 ctcctcccgccgcccgagctgc 186
           ||||||||||||||||||||||
Sbjct: 36  ctcctcccgccgcccgagctgc 15
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>gb|AE010358.1| Methanopyrus kandleri AV19 section 57 of 157 of the complete genome
          Length = 11739

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 324  gagatcgacgagttccgggag 344
            |||||||||||||||||||||
Sbjct: 7656 gagatcgacgagttccgggag 7676
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>ref|XM_476454.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1920

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  ctgctgctgcgccgacgccgc 247
            |||||||||||||||||||||
Sbjct: 1791 ctgctgctgcgccgacgccgc 1771
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>gb|CP000147.1| Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequence
          Length = 100828

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 175   cgcccgagctgccgctggccttcgg 199
             |||||||||||||||| ||||||||
Sbjct: 56776 cgcccgagctgccgctcgccttcgg 56752
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>gb|AY657625.1| Synthetic construct Peudomonas aeruginosa clone FLH041335.01F
           PA3665 gene, partial cds
          Length = 624

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 190 tggccttcgggttgcccgccg 210
           |||||||||||||||||||||
Sbjct: 376 tggccttcgggttgcccgccg 356
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>gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 185790

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 39    gccgccgcctacacctcgcgcctgg 63
             ||||||||||||||||||| |||||
Sbjct: 15790 gccgccgcctacacctcgcccctgg 15766
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>gb|AC010037.7| Drosophila melanogaster 3L BAC RP98-6E4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 187555

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 39    gccgccgcctacacctcgcgcctgg 63
             ||||||||||||||||||| |||||
Sbjct: 70395 gccgccgcctacacctcgcccctgg 70371



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 39    gccgccgcctacacctcgcgcctgg 63
             ||||||||||||||||||| |||||
Sbjct: 50852 gccgccgcctacacctcgcccctgg 50828
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>ref|NM_168260.1| Drosophila melanogaster CG13679-RB, transcript variant B (CG13679),
           mRNA
          Length = 488

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 39  gccgccgcctacacctcgcgcctgg 63
           ||||||||||||||||||| |||||
Sbjct: 345 gccgccgcctacacctcgcccctgg 369
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>ref|NM_139936.1| Drosophila melanogaster CG13678-RA (CG13678), mRNA
          Length = 557

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 39  gccgccgcctacacctcgcgcctgg 63
           ||||||||||||||||||| |||||
Sbjct: 352 gccgccgcctacacctcgcccctgg 376
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>ref|NM_139933.1| Drosophila melanogaster CG13679-RA, transcript variant A (CG13679),
           mRNA
          Length = 501

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 39  gccgccgcctacacctcgcgcctgg 63
           ||||||||||||||||||| |||||
Sbjct: 358 gccgccgcctacacctcgcccctgg 382
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>gb|AC104448.2| Homo sapiens chromosome 3 clone RP11-24C3, complete sequence
          Length = 155470

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 397   ggccgacgcccgcctcggcgc 417
             |||||||||||||||||||||
Sbjct: 88680 ggccgacgcccgcctcggcgc 88660
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>gb|AC093891.3| Homo sapiens BAC clone RP11-691E1 from 4, complete sequence
          Length = 95771

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   tcctcccgccgcccgagctgc 186
             |||||||||||||||||||||
Sbjct: 12634 tcctcccgccgcccgagctgc 12614
to top
>gb|AY071202.1| Drosophila melanogaster RE24439 full length cDNA
          Length = 575

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 39  gccgccgcctacacctcgcgcctgg 63
           ||||||||||||||||||| |||||
Sbjct: 352 gccgccgcctacacctcgcccctgg 376
to top
>gb|AY071121.1| Drosophila melanogaster RE17113 full length cDNA
          Length = 503

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 39  gccgccgcctacacctcgcgcctgg 63
           ||||||||||||||||||| |||||
Sbjct: 345 gccgccgcctacacctcgcccctgg 369
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 406     ccgcctcggcgctgccttcgc 426
               |||||||||||||||||||||
Sbjct: 3638145 ccgcctcggcgctgccttcgc 3638165
to top
>gb|AY129335.1| Mycobacteriophage Corndog, complete genome
          Length = 69777

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 49    acacctcgcgcctgggcctgc 69
             |||||||||||||||||||||
Sbjct: 14187 acacctcgcgcctgggcctgc 14207
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 227     ctgctgctgcgccgacgccgc 247
               |||||||||||||||||||||
Sbjct: 1302734 ctgctgctgcgccgacgccgc 1302714



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 156      gccagctgcctcctcccgcc 175
                ||||||||||||||||||||
Sbjct: 18499758 gccagctgcctcctcccgcc 18499739
to top
>gb|AE004786.1| Pseudomonas aeruginosa PAO1, section 347 of 529 of the complete
            genome
          Length = 10235

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 190  tggccttcgggttgcccgccg 210
            |||||||||||||||||||||
Sbjct: 2530 tggccttcgggttgcccgccg 2510
to top
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 383    cacgccctggaggaggccgacgccc 407
              |||||||||||||||||| ||||||
Sbjct: 383378 cacgccctggaggaggcctacgccc 383402
to top
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0474G09
          Length = 169511

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 227   ctgctgctgcgccgacgccgc 247
             |||||||||||||||||||||
Sbjct: 67569 ctgctgctgcgccgacgccgc 67549
to top
>dbj|AB007867.1| Homo sapiens KIAA0407 mRNA, partial cds
          Length = 7308

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 397 ggccgacgcccgcctcggcgc 417
           |||||||||||||||||||||
Sbjct: 164 ggccgacgcccgcctcggcgc 184
to top
>dbj|AK109848.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F05, full
           insert sequence
          Length = 1440

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 227 ctgctgctgcgccgacgccgc 247
           |||||||||||||||||||||
Sbjct: 869 ctgctgctgcgccgacgccgc 849
to top
>gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29 of 83 of the complete
              sequence
          Length = 281917

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 39     gccgccgcctacacctcgcgcctgg 63
              ||||||||||||||||||| |||||
Sbjct: 171215 gccgccgcctacacctcgcccctgg 171239



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 39     gccgccgcctacacctcgcgcctgg 63
              ||||||||||||||||||| |||||
Sbjct: 151672 gccgccgcctacacctcgcccctgg 151696
to top
>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 383   cacgccctggaggaggccgacgccc 407
             |||||||||||||||||| ||||||
Sbjct: 33030 cacgccctggaggaggcctacgccc 33054
to top
>gb|AC134772.2| Homo sapiens chromosome 3 clone RP13-794C1, complete sequence
          Length = 177231

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 397   ggccgacgcccgcctcggcgc 417
             |||||||||||||||||||||
Sbjct: 42978 ggccgacgcccgcctcggcgc 42958
to top
>gb|U57340.1|MKU57340 Methanopyrus kandleri methyl coenzyme M reductase operon, mcrB, mcrD,
            mcrC, mcrG and mcrA genes, complete cds, and mtrE gene,
            partial cds
          Length = 5914

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 324  gagatcgacgagttccgggag 344
            |||||||||||||||||||||
Sbjct: 1552 gagatcgacgagttccgggag 1572
to top
>dbj|AB024601.1| Pseudomonas aeruginosa dapD gene for tetrahydrodipicolinate
            N-succinyletransferase, complete cds, strain PAO1
          Length = 14807

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 190  tggccttcgggttgcccgccg 210
            |||||||||||||||||||||
Sbjct: 5504 tggccttcgggttgcccgccg 5524
to top
>ref|XM_482535.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 969

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 236 cgccgacgccgcgggggcgcccgcgttc 263
           ||||||||| |||| |||||||||||||
Sbjct: 621 cgccgacgcggcggcggcgcccgcgttc 648
to top
>ref|NM_003178.3| Homo sapiens synapsin II (SYN2), transcript variant IIb, mRNA
          Length = 3899

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 394 ggaggccgacgcccgcctcggcgc 417
           |||||||| |||||||||||||||
Sbjct: 341 ggaggccgccgcccgcctcggcgc 364
to top
>ref|NM_133625.2| Homo sapiens synapsin II (SYN2), transcript variant IIa, mRNA
          Length = 2694

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 394 ggaggccgacgcccgcctcggcgc 417
           |||||||| |||||||||||||||
Sbjct: 341 ggaggccgccgcccgcctcggcgc 364
to top
>gb|AC158787.14| Mus musculus chromosome 15, clone RP23-136G8, complete sequence
          Length = 203772

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    cgggggcgcccgcgttcccg 266
              ||||||||||||||||||||
Sbjct: 197138 cgggggcgcccgcgttcccg 197157
to top
>gb|BC019435.1| Mus musculus caldesmon 1, mRNA (cDNA clone MGC:30319 IMAGE:5148205),
            complete cds
          Length = 2631

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 232  gctgcgccgacgccgcgggg 251
            ||||||||||||||||||||
Sbjct: 988  gctgcgccgacgccgcgggg 1007
to top
>gb|BC051307.1| Homo sapiens synapsin II, transcript variant IIa, mRNA (cDNA clone
           MGC:59674 IMAGE:5802100), complete cds
          Length = 2682

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 394 ggaggccgacgcccgcctcggcgc 417
           |||||||| |||||||||||||||
Sbjct: 329 ggaggccgccgcccgcctcggcgc 352
to top
>ref|XM_882934.1| PREDICTED: Bos taurus hypothetical protein LOC617532 (LOC617532),
           mRNA
          Length = 1566

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gggggcgcccgcgttcccgc 267
           ||||||||||||||||||||
Sbjct: 773 gggggcgcccgcgttcccgc 792
to top
>ref|NM_201359.1| Mus musculus transmembrane protein 106C (Tmem106c), mRNA
          Length = 1630

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 cgggggcgcccgcgttcccg 266
           ||||||||||||||||||||
Sbjct: 61  cgggggcgcccgcgttcccg 80
to top
>ref|XM_536913.2| PREDICTED: Canis familiaris similar to HIRA interacting protein 3
            (LOC479786), mRNA
          Length = 2781

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 158  cagctgcctcctcccgccgc 177
            ||||||||||||||||||||
Sbjct: 1931 cagctgcctcctcccgccgc 1912
to top
>emb|AL450304.33| Human DNA sequence from clone RP11-505O17 on chromosome 1 Contains the
             5' end of a gene for a novel protein, a processed
             pseudogene similar to natural cytotoxicity triggering
             receptor 1 (NCR1), a processed pseudogene similar to
             keratin 18 (KRT18), the 5' end of the LAMC1 for laminin,
             gamma 1 (formerly LAMB2) and CpG island, complete sequence
          Length = 172837

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   ctcctcccgccgcccgagct 184
             ||||||||||||||||||||
Sbjct: 19350 ctcctcccgccgcccgagct 19369
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 189     ctggccttcgggttgcccgccggc 212
               ||||||||||| ||||||||||||
Sbjct: 2288471 ctggccttcggcttgcccgccggc 2288448
to top
>gb|AY331191.1| Gossypium barbadense clone 53-1 NBS-type resistance protein-like
           gene, partial sequence
          Length = 508

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  agctcaaaagaaaatcaagt 30
           ||||||||||||||||||||
Sbjct: 354 agctcaaaagaaaatcaagt 373
to top
>gb|AC144400.2| Lemur catta clone LBNL2-87E20, complete sequence
          Length = 181705

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   gccagctgcctcctcccgcc 175
             ||||||||||||||||||||
Sbjct: 36307 gccagctgcctcctcccgcc 36288
to top
>gb|AC091535.2| Takifugu rubripes clone 241F4, complete sequence
          Length = 71409

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   gagctgccgctggccttcgg 199
             ||||||||||||||||||||
Sbjct: 45647 gagctgccgctggccttcgg 45666
to top
>emb|Y13383.2|BPHYPLCRD Bordetella pertussis DNA for putative pathogenicity island coding for
             type III secretion system and flanking house keeping genes
          Length = 35026

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   gaggaggccgacgcccgcct 411
             ||||||||||||||||||||
Sbjct: 17401 gaggaggccgacgcccgcct 17420
to top
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    gaggaggccgacgcccgcct 411
              ||||||||||||||||||||
Sbjct: 335717 gaggaggccgacgcccgcct 335736
to top
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    gaggaggccgacgcccgcct 411
              ||||||||||||||||||||
Sbjct: 281193 gaggaggccgacgcccgcct 281212
to top
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    gaggaggccgacgcccgcct 411
              ||||||||||||||||||||
Sbjct: 292146 gaggaggccgacgcccgcct 292127
to top
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    gccgacgcccgcctcggcgc 417
              ||||||||||||||||||||
Sbjct: 231790 gccgacgcccgcctcggcgc 231809
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   cctggaggaggccgacgccc 407
             ||||||||||||||||||||
Sbjct: 21107 cctggaggaggccgacgccc 21088
to top
>ref|NM_145575.1| Mus musculus caldesmon 1 (Cald1), mRNA
          Length = 2631

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 232  gctgcgccgacgccgcgggg 251
            ||||||||||||||||||||
Sbjct: 988  gctgcgccgacgccgcgggg 1007
to top
>dbj|AK148009.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library,
           clone:G270138C06 product:caldesmon 1, full insert
           sequence
          Length = 3404

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 gctgcgccgacgccgcgggg 251
           ||||||||||||||||||||
Sbjct: 401 gctgcgccgacgccgcgggg 420
to top
>gb|AC018841.4| Homo sapiens chromosome 3 clone RP11-7F24 map 3p, complete sequence
          Length = 198264

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 394    ggaggccgacgcccgcctcggcgc 417
              |||||||| |||||||||||||||
Sbjct: 110400 ggaggccgccgcccgcctcggcgc 110423
to top
>gb|AC153869.7| Mus musculus 6 BAC RP23-386A17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 222826

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   gctgcgccgacgccgcgggg 251
             ||||||||||||||||||||
Sbjct: 10594 gctgcgccgacgccgcgggg 10613
to top
>emb|CR338694.1| Gallus gallus finished cDNA, clone ChEST40l18
          Length = 1030

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 337 tccgggaggtggagtcggag 356
           ||||||||||||||||||||
Sbjct: 122 tccgggaggtggagtcggag 141
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 236      cgccgacgccgcgggggcgcccgcgttc 263
                ||||||||| |||| |||||||||||||
Sbjct: 20924500 cgccgacgcggcggcggcgcccgcgttc 20924527
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 236     cgccgacgccgcgggggcgcccgc 259
               |||||||||||||| |||||||||
Sbjct: 3189607 cgccgacgccgcggcggcgcccgc 3189630
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 170     cccgccgcccgagctgccgc 189
               ||||||||||||||||||||
Sbjct: 2346708 cccgccgcccgagctgccgc 2346727
to top
>gb|BC046621.1| Mus musculus transmembrane protein 106C, mRNA (cDNA clone MGC:54819
           IMAGE:6308771), complete cds
          Length = 1630

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 cgggggcgcccgcgttcccg 266
           ||||||||||||||||||||
Sbjct: 61  cgggggcgcccgcgttcccg 80
to top
>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1111_B08
          Length = 131184

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 236    cgccgacgccgcgggggcgcccgcgttc 263
              ||||||||| |||| |||||||||||||
Sbjct: 102801 cgccgacgcggcggcggcgcccgcgttc 102828
to top
>dbj|AK197986.1| Mus musculus cDNA, clone:Y1G0126M09, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000064200, based on BLAT search
          Length = 273

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 cgggggcgcccgcgttcccg 266
           ||||||||||||||||||||
Sbjct: 37  cgggggcgcccgcgttcccg 56
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    gccgacgcccgcctcggcgc 417
              ||||||||||||||||||||
Sbjct: 971582 gccgacgcccgcctcggcgc 971601
to top
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0419H03
          Length = 129020

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 236    cgccgacgccgcgggggcgcccgc 259
              |||||||||||||| |||||||||
Sbjct: 117761 cgccgacgccgcggcggcgcccgc 117784
to top
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1103G11
          Length = 182931

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 236   cgccgacgccgcgggggcgcccgc 259
             |||||||||||||| |||||||||
Sbjct: 61794 cgccgacgccgcggcggcgcccgc 61817
to top
>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1457_D07
          Length = 103688

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   gccagctgcctcctcccgcc 175
             ||||||||||||||||||||
Sbjct: 28514 gccagctgcctcctcccgcc 28495
to top
>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_B11
          Length = 102824

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   gccagctgcctcctcccgcc 175
             ||||||||||||||||||||
Sbjct: 91606 gccagctgcctcctcccgcc 91587
to top
>gb|AC153627.2| Mus musculus 6 BAC RP23-104H13 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 198060

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   gctgcgccgacgccgcgggg 251
             ||||||||||||||||||||
Sbjct: 70269 gctgcgccgacgccgcgggg 70250
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 408     gcctcggcgctgccttcgcc 427
               ||||||||||||||||||||
Sbjct: 1447777 gcctcggcgctgccttcgcc 1447796
to top
>gb|U40215.1|HSU40215 Human synapsin IIb mRNA, complete cds
          Length = 2074

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 394 ggaggccgacgcccgcctcggcgc 417
           |||||||| |||||||||||||||
Sbjct: 235 ggaggccgccgcccgcctcggcgc 258
to top
>gb|AC134554.6| Mus musculus BAC clone RP24-313F7 from chromosome 15, complete sequence
          Length = 148029

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    cgggggcgcccgcgttcccg 266
              ||||||||||||||||||||
Sbjct: 108009 cgggggcgcccgcgttcccg 108028
to top
>dbj|AB209088.1| Homo sapiens mRNA for synapsin II isoform IIb variant protein
          Length = 3835

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 394 ggaggccgacgcccgcctcggcgc 417
           |||||||| |||||||||||||||
Sbjct: 289 ggaggccgccgcccgcctcggcgc 312


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,531,298
Number of Sequences: 3902068
Number of extensions: 3531298
Number of successful extensions: 80314
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78845
Number of HSP's gapped (non-prelim): 1469
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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