ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast57g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194838.1| Oryza sativa (japonica cultivar-group) putative... 101 2e-18
2gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, c... 101 2e-18
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
4dbj|AK109913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 3e-04
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
8gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome... 54 3e-04
9dbj|AK100431.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
11dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
12gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, comple... 48 0.021
13gb|AC102114.9| Mus musculus chromosome 10, clone RP23-139F20, co... 48 0.021
14emb|AJ001268.1|HVPATHPR5 Hordeum vulgare mRNA for basic pathogen... 48 0.021
15gb|AF355457.1|AF355457 Hordeum vulgare thaumatin-like protein TL... 48 0.021
16gb|AF355456.1|AF355456 Hordeum vulgare thaumatin-like protein TL... 48 0.021
17gb|AF016327.1|AF016327 Hordeum vulgare Barperm1 (perm1) mRNA, pa... 48 0.021
18gb|AC126928.3| Mus musculus BAC clone RP24-337I23 from chromosom... 46 0.083
19emb|AL844159.7| Mouse DNA sequence from clone RP23-285A1 on chro... 46 0.083
20gb|AC102430.9| Mus musculus chromosome 14, clone RP24-103F5, com... 44 0.33
21gb|AC147047.2| Mus musculus BAC clone RP23-97D19 from chromosome... 44 0.33
22gb|AC130816.4| Mus musculus BAC clone RP23-52D16 from chromosome... 44 0.33
23gb|AC156645.2| Mus musculus BAC clone RP23-59I22 from chromosome... 44 0.33
24emb|AL138717.6| Human DNA sequence from clone RP11-11D8 on chrom... 44 0.33
25gb|AC098965.2| Homo sapiens chromosome 16 clone RP11-419L9, comp... 44 0.33
26dbj|AK084204.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 44 0.33
27dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
28gb|AC175465.1| Ornithorhynchus anatinus BAC clone OABb-36D11 fro... 44 0.33
29dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
30gb|AC133519.3| Mus musculus BAC clone RP23-178N8 from chromosome... 44 0.33
31gb|AC154176.5| Mus musculus BAC clone RP23-463F22 from chromosom... 44 0.33
32gb|AC163692.4| Mus musculus BAC clone RP24-68H1 from chromosome ... 44 0.33
33gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 42 1.3
34gb|AC163688.5| Mus musculus BAC clone CH25-316N15 from chromosom... 42 1.3
35gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.3
36gb|AC147642.2| Mus musculus BAC clone RP23-27D6 from chromosome ... 42 1.3
37gb|AC122914.4| Mus musculus BAC clone RP23-26F9 from 15, complet... 42 1.3
38emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, compl... 42 1.3
39emb|CR848728.7| Zebrafish DNA sequence from clone CH211-251H16 i... 42 1.3
40emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.3
41emb|BX511268.5| Zebrafish DNA sequence from clone CH211-66B9 in ... 42 1.3
42gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.3
43emb|BX005444.14| Zebrafish DNA sequence from clone CH211-119H23 ... 42 1.3
44gb|AF180391.1| Simian hemorrhagic fever virus, complete genome 42 1.3
45emb|AL928693.9| Mouse DNA sequence from clone RP23-407K8 on chro... 42 1.3
46gb|AC022497.18| Homo sapiens 3 BAC RP11-80P20 (Roswell Park Canc... 42 1.3
47gb|AC163278.5| Mus musculus BAC clone RP24-281A21 from chromosom... 42 1.3
48gb|AC149592.2| Mus musculus BAC clone RP23-270M4 from 14, comple... 42 1.3
49gb|AC139218.10| Mus musculus chromosome 15, clone RP23-456O10, c... 40 5.1
50gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 5.1
51gb|AC102296.6| Mus musculus chromosome 3, clone RP24-389G6, comp... 40 5.1
52gb|AC124107.8| Mus musculus chromosome 5, clone RP24-317M4, comp... 40 5.1
53gb|AC115063.8| Mus musculus chromosome 1, clone RP24-400H18, com... 40 5.1
54gb|AC118194.8| Mus musculus chromosome 3, clone RP23-464I9, comp... 40 5.1
55ref|XM_419948.1| PREDICTED: Gallus gallus similar to Ribonucleos... 40 5.1
56ref|XM_418364.1| PREDICTED: Gallus gallus similar to ribonucleot... 40 5.1
57gb|AC102569.34| Mus musculus chromosome 12, clone RP23-226F7, co... 40 5.1
58gb|AC131106.4| Mus musculus chromosome 15 clone RP23-301M20, com... 40 5.1
59gb|AC164316.3| Mus musculus BAC clone RP23-16B4 from chromosome ... 40 5.1
60gb|AC122010.3| Mus musculus BAC clone RP24-349I15 from chromosom... 40 5.1
61gb|AC131794.3| Mus musculus BAC clone RP24-486P14 from chromosom... 40 5.1
62gb|AC131742.2| Mus musculus BAC clone RP23-67I3 from chromosome ... 40 5.1
63gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, com... 40 5.1
64gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 5.1
65gb|AC122254.4| Mus musculus BAC clone RP23-171M24 from 3, comple... 40 5.1
66gb|AC121590.2| Mus musculus BAC clone RP23-281L22 from 2, comple... 40 5.1
67gb|AC134382.13| Mus musculus strain C57BL/6J clone rp23-167l1, c... 40 5.1
68emb|AL596257.5| Human DNA sequence from clone RP11-251B9 on chro... 40 5.1
69gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 5.1
70emb|AL162717.10| Human DNA sequence from clone RP11-123H22 on ch... 40 5.1
71emb|AL158847.22| Human DNA sequence from clone RP4-735C1 on chro... 40 5.1
72gb|AC158912.3| Mus musculus chromosome 5, clone RP23-131C17, com... 40 5.1
73gb|AC158765.4| Mus musculus chromosome 1, clone RP24-218I23, com... 40 5.1
74emb|AL023655.1|HS242N11 Human DNA sequence from clone RP1-242N11... 40 5.1
75ref|XM_792547.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.1
76emb|X78287.1|CLJOP2D C.lacryma-jobi (cv Adlay) Opaque 2 gene 40 5.1
77emb|CR759788.7| Zebrafish DNA sequence from clone CH211-153F13, ... 40 5.1
78gb|AC153012.4| Mus musculus BAC clone RP23-302F19 from chromosom... 40 5.1
79gb|AE006001.1| Caulobacter crescentus CB15 section 327 of 359 of... 40 5.1
80gb|AC092860.39| Pan troglodytes clone rp43-125j14, complete sequ... 40 5.1
81gb|AC007961.32| Mus musculus strain 129S6/SvEvTac clone rp21-594... 40 5.1
82gb|AC005302.70| Mus musculus strain 129S6/SvEvTac chromosome 10 ... 40 5.1
83gb|AC069282.6| Homo sapiens BAC clone RP11-61L9 from 7, complete... 40 5.1
84gb|AF442967.1| Triticum aestivum clone WAS-3a thaumatin-like pro... 40 5.1
85gb|AC154588.2| Mus musculus BAC clone RP23-363L9 from chromosome... 40 5.1
86gb|AC079308.15| Homo sapiens 3 BAC RP11-57P12 (Roswell Park Canc... 40 5.1
87gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.1
88emb|CR353642.1| Gallus gallus finished cDNA, clone ChEST932h1 40 5.1
89dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
90dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
91gb|AC093028.13| Homo sapiens 12 BAC RP11-604N13 (Roswell Park Ca... 40 5.1
92gb|AC105914.4| Homo sapiens BAC clone RP13-577H12 from 4, comple... 40 5.1
93gb|AC093761.3| Homo sapiens BAC clone RP11-89I4 from 4, complete... 40 5.1
94gb|AC069205.6| Homo sapiens BAC clone RP11-735P12 from 2, comple... 40 5.1
95gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell ... 40 5.1
96dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
97emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, ... 40 5.1
98dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
99dbj|AB024026.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 5.1
100emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.1
101gb|AY785495.1| Arabidopsis thaliana At5g37020 gene, promoter region 40 5.1
102gb|AF170726.2| Myxoma virus strain Lausanne, complete genome 40 5.1
103gb|AC122424.4| Mus musculus BAC clone RP24-173E19 from 8, comple... 40 5.1
104gb|AC142262.3| Mus musculus BAC clone RP24-486I4 from 8, complet... 40 5.1
105gb|AC122229.4| Mus musculus BAC clone RP23-132F18 from 8, comple... 40 5.1
106gb|AC168267.1| Mus musculus BAC clone RP23-431L24 from chromosom... 40 5.1
107gb|AC139295.5| Mus musculus BAC clone RP24-131B6 from chromosome... 40 5.1
108gb|AC133516.3| Mus musculus BAC clone RP23-260G15 from chromosom... 40 5.1
109emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chr... 40 5.1 
>ref|NM_194838.1| Oryza sativa (japonica cultivar-group) putative thaumatin-like
           protein (OSJNBa0030B02.12), mRNA
          Length = 1170

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                       
Query: 287 ggaggcggcaatgttcacgttcgtcaaccggtgcgcatacacggtgtggccaggcgtcct 346
           ||||||||| | |||||||||||||||||||||| |  ||||||||||||| ||||| ||
Sbjct: 78  ggaggcggcgacgttcacgttcgtcaaccggtgcacggacacggtgtggccgggcgtgct 137

                                              
Query: 347 gtcgaacgccggcaccgcgcggctcggcaccacgg 381
           |||||||||||| | ||||||||| | ||||||||
Sbjct: 138 gtcgaacgccgggagcgcgcggctggccaccacgg 172
to top
>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence
          Length = 146836

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                          
Query: 287    ggaggcggcaatgttcacgttcgtcaaccggtgcgcatacacggtgtggccaggcgtcct 346
              ||||||||| | |||||||||||||||||||||| |  ||||||||||||| ||||| ||
Sbjct: 102096 ggaggcggcgacgttcacgttcgtcaaccggtgcacggacacggtgtggccgggcgtgct 102037

                                                 
Query: 347    gtcgaacgccggcaccgcgcggctcggcaccacgg 381
              |||||||||||| | ||||||||| | ||||||||
Sbjct: 102036 gtcgaacgccgggagcgcgcggctggccaccacgg 102002
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                           
Query: 287     ggaggcggcaatgttcacgttcgtcaaccggtgcgcatacacggtgtggccaggcgtcct 346
               ||||||||| | |||||||||||||||||||||| |  ||||||||||||| ||||| ||
Sbjct: 2775320 ggaggcggcgacgttcacgttcgtcaaccggtgcacggacacggtgtggccgggcgtgct 2775261

                                                  
Query: 347     gtcgaacgccggcaccgcgcggctcggcaccacgg 381
               |||||||||||| | ||||||||| | ||||||||
Sbjct: 2775260 gtcgaacgccgggagcgcgcggctggccaccacgg 2775226
to top
>dbj|AK109913.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-A03, full
           insert sequence
          Length = 1306

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                       
Query: 287 ggaggcggcaatgttcacgttcgtcaaccggtgcgcatacacggtgtggccaggcgtcct 346
           ||||||||| | |||||||||||||||||||||| |  ||||||||||||| ||||| ||
Sbjct: 23  ggaggcggcgacgttcacgttcgtcaaccggtgcacggacacggtgtggccgggcgtgct 82

                                              
Query: 347 gtcgaacgccggcaccgcgcggctcggcaccacgg 381
           |||||||||||| | ||||||||| | ||||||||
Sbjct: 83  gtcgaacgccgggagcgcgcggctggccaccacgg 117
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                           
Query: 287     ggaggcggcaatgttcacgttcgtcaaccggtgcgcatacacggtgtggccaggcgtcct 346
               ||||||||| | |||||||||||||||||||||| |  ||||||||||||| ||||| ||
Sbjct: 2775271 ggaggcggcgacgttcacgttcgtcaaccggtgcacggacacggtgtggccgggcgtgct 2775212

                                                  
Query: 347     gtcgaacgccggcaccgcgcggctcggcaccacgg 381
               |||||||||||| | ||||||||| | ||||||||
Sbjct: 2775211 gtcgaacgccgggagcgcgcggctggccaccacgg 2775177
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                          
Query: 300     ttcacgttcgtcaaccggtgcgcatacacggtgtggccaggcgtcctgtcgaacgccgg 358
               ||||||||||| ||||||||| |    ||||||||||| ||| ||||||||||||||||
Sbjct: 7583222 ttcacgttcgtgaaccggtgcacggggacggtgtggccgggcatcctgtcgaacgccgg 7583164
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                          
Query: 300     ttcacgttcgtcaaccggtgcgcatacacggtgtggccaggcgtcctgtcgaacgccgg 358
               ||||||||||| ||||||||| |    ||||||||||| ||| ||||||||||||||||
Sbjct: 7581057 ttcacgttcgtgaaccggtgcacggggacggtgtggccgggcatcctgtcgaacgccgg 7580999
to top
>gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0042A11,
              complete sequence
          Length = 113049

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                         
Query: 300    ttcacgttcgtcaaccggtgcgcatacacggtgtggccaggcgtcctgtcgaacgccgg 358
              ||||||||||| ||||||||| |    ||||||||||| ||| ||||||||||||||||
Sbjct: 112118 ttcacgttcgtgaaccggtgcacggggacggtgtggccgggcatcctgtcgaacgccgg 112060
to top
>dbj|AK100431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088H12, full
           insert sequence
          Length = 1720

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 300 ttcacgttcgtcaaccggtgcgcatacacggtgtggccaggcgtcctgtcgaacgccgg 358
           ||||||||||| ||||||||| |    ||||||||||| ||| ||||||||||||||||
Sbjct: 351 ttcacgttcgtgaaccggtgcacggggacggtgtggccgggcatcctgtcgaacgccgg 409
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 311      caaccggtgcgcatacacggtgtggccaggcgtcctgtcgaacgccggc 359
                |||||||||||  |||||||||||||| ||| |||| || |||||||||
Sbjct: 29904461 caaccggtgcggctacacggtgtggccgggcatcctctccaacgccggc 29904509
to top
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0481E08
          Length = 171965

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                               
Query: 311    caaccggtgcgcatacacggtgtggccaggcgtcctgtcgaacgccggc 359
              |||||||||||  |||||||||||||| ||| |||| || |||||||||
Sbjct: 99974  caaccggtgcggctacacggtgtggccgggcatcctctccaacgccggc 100022
to top
>gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, complete sequence
          Length = 229072

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 23     ctcccctatcctttccccctctct 46
              ||||||||||||||||||||||||
Sbjct: 112713 ctcccctatcctttccccctctct 112736
to top
>gb|AC102114.9| Mus musculus chromosome 10, clone RP23-139F20, complete sequence
          Length = 232173

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 18     tccccctcccctatcctttccccctctc 45
              |||||||||||| |||||||||||||||
Sbjct: 171349 tccccctcccctttcctttccccctctc 171376
to top
>emb|AJ001268.1|HVPATHPR5 Hordeum vulgare mRNA for basic pathogenesis-related protein, PR5
          Length = 867

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 307 tcgtcaaccggtgcgcatacacggtgtggccaggcg 342
           |||||||||||||| | |||||||||||||| ||||
Sbjct: 104 tcgtcaaccggtgctcctacacggtgtggccgggcg 139
to top
>gb|AF355457.1|AF355457 Hordeum vulgare thaumatin-like protein TLP7 mRNA, complete cds
          Length = 967

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 307 tcgtcaaccggtgcgcatacacggtgtggccaggcg 342
           |||||||||||||| | |||||||||||||| ||||
Sbjct: 141 tcgtcaaccggtgctcctacacggtgtggccgggcg 176
to top
>gb|AF355456.1|AF355456 Hordeum vulgare thaumatin-like protein TLP6 mRNA, complete cds
          Length = 921

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 307 tcgtcaaccggtgcgcatacacggtgtggccaggcg 342
           |||||||||||||| | |||||||||||||| ||||
Sbjct: 174 tcgtcaaccggtgctcctacacggtgtggccgggcg 209
to top
>gb|AF016327.1|AF016327 Hordeum vulgare Barperm1 (perm1) mRNA, partial cds
          Length = 616

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 307 tcgtcaaccggtgcgcatacacggtgtggccaggcg 342
           |||||||||||||| | |||||||||||||| ||||
Sbjct: 20  tcgtcaaccggtgctcctacacggtgtggccgggcg 55
to top
>gb|AC126928.3| Mus musculus BAC clone RP24-337I23 from chromosome 9, complete sequence
          Length = 187235

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 21    ccctcccctatcctttccccctctctttcct 51
             ||||||||| ||||||||||||| |||||||
Sbjct: 74860 ccctcccctttcctttccccctcactttcct 74830
to top
>emb|AL844159.7| Mouse DNA sequence from clone RP23-285A1 on chromosome X, complete
             sequence
          Length = 27698

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 17    ttccccctcccctatcctttccccctctctttcct 51
             |||||||| ||||||||||||||| ||||| ||||
Sbjct: 18166 ttcccccttccctatcctttccccttctctatcct 18132



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    ttccccctcccctatcctttcccc 40
             |||||||| |||||||||||||||
Sbjct: 18272 ttcccccttccctatcctttcccc 18249



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    ttccccctcccctatcctttcccc 40
             |||||||| |||||||||||||||
Sbjct: 18202 ttcccccttccctatcctttcccc 18179
to top
>gb|AC102430.9| Mus musculus chromosome 14, clone RP24-103F5, complete sequence
          Length = 153864

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 26    ccctatcctttccccctctctttcct 51
             |||||||||||||||||| |||||||
Sbjct: 13663 ccctatcctttccccctccctttcct 13638
to top
>gb|AC147047.2| Mus musculus BAC clone RP23-97D19 from chromosome 6, complete sequence
          Length = 239653

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 18     tccccctcccctatcctttccc 39
              ||||||||||||||||||||||
Sbjct: 165323 tccccctcccctatcctttccc 165302
to top
>gb|AC130816.4| Mus musculus BAC clone RP23-52D16 from chromosome 6, complete sequence
          Length = 111111

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 18     tccccctcccctatcctttccc 39
              ||||||||||||||||||||||
Sbjct: 103365 tccccctcccctatcctttccc 103386
to top
>gb|AC156645.2| Mus musculus BAC clone RP23-59I22 from chromosome 12, complete sequence
          Length = 247201

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 22     cctcccctatcctttccccctctctttcct 51
              |||||||| ||||| |||||||||||||||
Sbjct: 184420 cctcccctctccttcccccctctctttcct 184449
to top
>emb|AL138717.6| Human DNA sequence from clone RP11-11D8 on chromosome 6 Contains the
            5' end of the NCUBE1 gene for non-canonical ubiquitin
            conjugating enzyme 1, the gene for a novel protein
            similar to rag C protein (GTR2), an NACA
            (nascent-polypeptide-associated complex alpha
            polypeptide) pseudogene, the 5' end of the ANKRD6 gene
            for ankyrin repeat domain 6 (KIAA0957) and three CpG
            islands, complete sequence
          Length = 104309

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 17   ttccccctcccctatcctttccccctctctttcc 50
            ||||||||||||| ||||| ||||||||| ||||
Sbjct: 8250 ttccccctcccctctccttcccccctctccttcc 8217
to top
>gb|AC098965.2| Homo sapiens chromosome 16 clone RP11-419L9, complete sequence
          Length = 191911

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 16     attccccctcccctatcctttccccc 41
              |||||||||||||| |||||||||||
Sbjct: 161628 attccccctcccctctcctttccccc 161653
to top
>dbj|AK084204.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230008G07 product:unclassifiable, full
            insert sequence
          Length = 2519

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 17   ttccccctcccctatcctttccccct 42
            |||||||||||| |||||||||||||
Sbjct: 1921 ttccccctcccccatcctttccccct 1896
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 317      gtgcgcatacacggtgtggccaggcgtcctgtcgaacgccgg 358
                |||||| |||||||||||||| ||  ||||||||| ||||||
Sbjct: 20787634 gtgcgcgtacacggtgtggccggggctcctgtcgagcgccgg 20787675
to top
>gb|AC175465.1| Ornithorhynchus anatinus BAC clone OABb-36D11 from chromosome unknown,
             complete sequence
          Length = 128273

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 22    cctcccctatcctttccccctctctt 47
             ||||||||||||| ||||||||||||
Sbjct: 41781 cctcccctatcctgtccccctctctt 41806
to top
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0569E11
          Length = 157319

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 317   gtgcgcatacacggtgtggccaggcgtcctgtcgaacgccgg 358
             |||||| |||||||||||||| ||  ||||||||| ||||||
Sbjct: 62663 gtgcgcgtacacggtgtggccggggctcctgtcgagcgccgg 62704
to top
>gb|AC133519.3| Mus musculus BAC clone RP23-178N8 from chromosome 5, complete sequence
          Length = 219269

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 24     tcccctatcctttccccctctc 45
              ||||||||||||||||||||||
Sbjct: 187841 tcccctatcctttccccctctc 187820
to top
>gb|AC154176.5| Mus musculus BAC clone RP23-463F22 from chromosome 13, complete sequence
          Length = 193103

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 17     ttccccctcccctatcctttccccct 42
              |||||||||||| |||||||||||||
Sbjct: 103302 ttccccctcccccatcctttccccct 103277
to top
>gb|AC163692.4| Mus musculus BAC clone RP24-68H1 from chromosome 14, complete sequence
          Length = 224333

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 26    ccctatcctttccccctctctttcct 51
             |||||||||||||||||| |||||||
Sbjct: 24463 ccctatcctttccccctccctttcct 24488
to top
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 275    atggagagagggggaggcggc 295
              |||||||||||||||||||||
Sbjct: 600257 atggagagagggggaggcggc 600237



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 275    atggagagagggggaggcggc 295
              |||||||||||||||||||||
Sbjct: 592982 atggagagagggggaggcggc 592962
to top
>gb|AC163688.5| Mus musculus BAC clone CH25-316N15 from chromosome 12, complete
             sequence
          Length = 106789

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 20    cccctcccctatcctttccccctctcttt 48
             ||||||||||| |||| ||||||||||||
Sbjct: 36039 cccctcccctaaccttcccccctctcttt 36011
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 356     cggcaccgcgcggctcggcac 376
               |||||||||||||||||||||
Sbjct: 1522774 cggcaccgcgcggctcggcac 1522754
to top
>gb|AC147642.2| Mus musculus BAC clone RP23-27D6 from chromosome 14, complete
            sequence
          Length = 212100

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   tcccctatcctttccccctct 44
            |||||||||||||||||||||
Sbjct: 5316 tcccctatcctttccccctct 5296
to top
>gb|AC122914.4| Mus musculus BAC clone RP23-26F9 from 15, complete sequence
          Length = 207417

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 25    cccctatcctttccccctctc 45
             |||||||||||||||||||||
Sbjct: 10876 cccctatcctttccccctctc 10896
to top
>emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, complete sequence
          Length = 191674

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 270   atttcatggagagagggggaggcgg 294
             |||||| ||||||||||||||||||
Sbjct: 44612 atttcaaggagagagggggaggcgg 44588
to top
>emb|CR848728.7| Zebrafish DNA sequence from clone CH211-251H16 in linkage group 2,
             complete sequence
          Length = 169884

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    tatcctttccccctctctttc 49
             |||||||||||||||||||||
Sbjct: 29411 tatcctttccccctctctttc 29431
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 356     cggcaccgcgcggctcggcac 376
               |||||||||||||||||||||
Sbjct: 2857520 cggcaccgcgcggctcggcac 2857500
to top
>emb|BX511268.5| Zebrafish DNA sequence from clone CH211-66B9 in linkage group 2,
             complete sequence
          Length = 167067

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    tatcctttccccctctctttc 49
             |||||||||||||||||||||
Sbjct: 41743 tatcctttccccctctctttc 41723
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 356    cggcaccgcgcggctcggcac 376
              |||||||||||||||||||||
Sbjct: 380750 cggcaccgcgcggctcggcac 380770
to top
>emb|BX005444.14| Zebrafish DNA sequence from clone CH211-119H23 in linkage group 2,
              complete sequence
          Length = 168979

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 29     tatcctttccccctctctttc 49
              |||||||||||||||||||||
Sbjct: 120725 tatcctttccccctctctttc 120745
to top
>gb|AF180391.1| Simian hemorrhagic fever virus, complete genome
          Length = 15717

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 66   ctcgtctttctccatctcctc 86
            |||||||||||||||||||||
Sbjct: 6672 ctcgtctttctccatctcctc 6692
to top
>emb|AL928693.9| Mouse DNA sequence from clone RP23-407K8 on chromosome 2, complete
             sequence
          Length = 206478

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 18    tccccctcccctatcctttccccctctct 46
             |||||||||||  ||||||||||||||||
Sbjct: 50057 tccccctcccccttcctttccccctctct 50085
to top
>gb|AC022497.18| Homo sapiens 3 BAC RP11-80P20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 147816

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   gctgaagagtgagagtgagga 149
             |||||||||||||||||||||
Sbjct: 77198 gctgaagagtgagagtgagga 77218
to top
>gb|AC163278.5| Mus musculus BAC clone RP24-281A21 from chromosome 12, complete
             sequence
          Length = 188100

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 20    cccctcccctatcctttccccctctcttt 48
             ||||||||||| |||| ||||||||||||
Sbjct: 11679 cccctcccctaaccttcccccctctcttt 11707
to top
>gb|AC149592.2| Mus musculus BAC clone RP23-270M4 from 14, complete sequence
          Length = 204601

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 24     tcccctatcctttccccctct 44
              |||||||||||||||||||||
Sbjct: 180018 tcccctatcctttccccctct 180038
to top
>gb|AC139218.10| Mus musculus chromosome 15, clone RP23-456O10, complete sequence
          Length = 163749

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    tcccctatcctttccccctc 43
             ||||||||||||||||||||
Sbjct: 92875 tcccctatcctttccccctc 92856
to top
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 355     ccggcaccgcgcggctcggc 374
               ||||||||||||||||||||
Sbjct: 2611615 ccggcaccgcgcggctcggc 2611634
to top
>gb|AC102296.6| Mus musculus chromosome 3, clone RP24-389G6, complete sequence
          Length = 184243

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   aagagtgagagtgaggagta 152
             ||||||||||||||||||||
Sbjct: 39328 aagagtgagagtgaggagta 39347
to top
>gb|AC124107.8| Mus musculus chromosome 5, clone RP24-317M4, complete sequence
          Length = 194641

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     tcctttccccctctctttcc 50
              ||||||||||||||||||||
Sbjct: 104746 tcctttccccctctctttcc 104727
to top
>gb|AC115063.8| Mus musculus chromosome 1, clone RP24-400H18, complete sequence
          Length = 192133

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tcccctatcctttccccctc 43
              ||||||||||||||||||||
Sbjct: 110240 tcccctatcctttccccctc 110221
to top
>gb|AC118194.8| Mus musculus chromosome 3, clone RP23-464I9, complete sequence
          Length = 180205

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   aagagtgagagtgaggagta 152
             ||||||||||||||||||||
Sbjct: 10486 aagagtgagagtgaggagta 10467
to top
>ref|XM_419948.1| PREDICTED: Gallus gallus similar to Ribonucleoside-diphosphate
            reductase M2 chain (Ribonucleotide reductase small chain)
            (LOC421936), mRNA
          Length = 3878

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 262  tccttttgatttcatggaga 281
            ||||||||||||||||||||
Sbjct: 3042 tccttttgatttcatggaga 3061
to top
>ref|XM_418364.1| PREDICTED: Gallus gallus similar to ribonucleotide reductase M2 B
           (TP53 inducible); p53-inducible ribonucleotide reductase
           small subunit 2 homolog (LOC420253), mRNA
          Length = 1233

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 tccttttgatttcatggaga 281
           ||||||||||||||||||||
Sbjct: 933 tccttttgatttcatggaga 952
to top
>gb|AC102569.34| Mus musculus chromosome 12, clone RP23-226F7, complete sequence
          Length = 167957

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    tcccctatcctttccccctc 43
             ||||||||||||||||||||
Sbjct: 81344 tcccctatcctttccccctc 81363
to top
>gb|AC131106.4| Mus musculus chromosome 15 clone RP23-301M20, complete sequence
          Length = 218875

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tcccctatcctttccccctc 43
              ||||||||||||||||||||
Sbjct: 148428 tcccctatcctttccccctc 148409
to top
>gb|AC164316.3| Mus musculus BAC clone RP23-16B4 from chromosome 6, complete sequence
          Length = 222892

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     tcccctatcctttccccctc 43
              ||||||||||||||||||||
Sbjct: 108795 tcccctatcctttccccctc 108814
to top
>gb|AC122010.3| Mus musculus BAC clone RP24-349I15 from chromosome 8, complete
            sequence
          Length = 198118

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 22   cctcccctatcctttccccctctc 45
            ||||||| ||||||||||||||||
Sbjct: 9556 cctcccccatcctttccccctctc 9579
to top
>gb|AC131794.3| Mus musculus BAC clone RP24-486P14 from chromosome 9, complete sequence
          Length = 166272

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     ccctatcctttccccctctc 45
              ||||||||||||||||||||
Sbjct: 150295 ccctatcctttccccctctc 150276
to top
>gb|AC131742.2| Mus musculus BAC clone RP23-67I3 from chromosome 1, complete sequence
          Length = 196557

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 17    ttccccctcccctatcctttccccctct 44
             ||||||||||||| ||||||| ||||||
Sbjct: 28750 ttccccctcccctttcctttctccctct 28723
to top
>gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, complete sequence
          Length = 185146

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 30     atcctttccccctctctttcctgt 53
              ||||||||||||||||| ||||||
Sbjct: 172623 atcctttccccctctctctcctgt 172646
to top
>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2 of
              11 of the complete sequence
          Length = 613322

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     tccccctcccctatcctttc 37
              ||||||||||||||||||||
Sbjct: 123682 tccccctcccctatcctttc 123701
to top
>gb|AC122254.4| Mus musculus BAC clone RP23-171M24 from 3, complete sequence
          Length = 198281

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    aagagtgagagtgaggagta 152
              ||||||||||||||||||||
Sbjct: 139140 aagagtgagagtgaggagta 139159
to top
>gb|AC121590.2| Mus musculus BAC clone RP23-281L22 from 2, complete sequence
          Length = 167364

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    tcccctatcctttccccctc 43
             ||||||||||||||||||||
Sbjct: 36857 tcccctatcctttccccctc 36876
to top
>gb|AC134382.13| Mus musculus strain C57BL/6J clone rp23-167l1, complete sequence
          Length = 194086

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tcccctatcctttccccctc 43
              ||||||||||||||||||||
Sbjct: 166018 tcccctatcctttccccctc 165999
to top
>emb|AL596257.5| Human DNA sequence from clone RP11-251B9 on chromosome 1, complete
             sequence
          Length = 60169

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ttctccatctcctccaaatc 92
             ||||||||||||||||||||
Sbjct: 23246 ttctccatctcctccaaatc 23265
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 361     ccgcgcggctcggcaccacg 380
               ||||||||||||||||||||
Sbjct: 2590003 ccgcgcggctcggcaccacg 2589984
to top
>emb|AL162717.10| Human DNA sequence from clone RP11-123H22 on chromosome 13q14.2-21.2
            Contains a novel gene, complete sequence
          Length = 153859

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   tccccctcccctatcctttc 37
            ||||||||||||||||||||
Sbjct: 3265 tccccctcccctatcctttc 3284
to top
>emb|AL158847.22| Human DNA sequence from clone RP4-735C1 on chromosome 1 Contains the 3'
             end of the GSTM5 gene for glutathione S-transferase M5,
             the GSTM3 gene for glutathione S-transferase M3 (brain),
             the EPS8L3 gene for EPS8-like 3, the 3' end of a novel
             gene, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
             5 13kDa (NDUFA5) pseudogene and the 5' end of a novel
             gene, complete sequence
          Length = 133451

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   tgtggccaggcgtcctgtcg 350
             ||||||||||||||||||||
Sbjct: 71668 tgtggccaggcgtcctgtcg 71687
to top
>gb|AC158912.3| Mus musculus chromosome 5, clone RP23-131C17, complete sequence
          Length = 182161

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     tcctttccccctctctttcc 50
              ||||||||||||||||||||
Sbjct: 155784 tcctttccccctctctttcc 155765
to top
>gb|AC158765.4| Mus musculus chromosome 1, clone RP24-218I23, complete sequence
          Length = 130451

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tcccctatcctttccccctc 43
              ||||||||||||||||||||
Sbjct: 129216 tcccctatcctttccccctc 129197
to top
>emb|AL023655.1|HS242N11 Human DNA sequence from clone RP1-242N11 on chromosome 6p22.3-23,
              complete sequence
          Length = 167514

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 252    gtcattgtgctccttttgatttca 275
              ||||| ||||||||||||||||||
Sbjct: 162328 gtcatggtgctccttttgatttca 162305
to top
>ref|XM_792547.1| PREDICTED: Strongylocentrotus purpuratus similar to Transcription
            elongation factor B polypeptide 3 (RNA polymerase II
            transcription factor SIII subunit A1) (SIII p110)
            (Elongin A) (EloA) (Elongin 110 kDa subunit) (LOC593051),
            mRNA
          Length = 2541

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 65   cctcgtctttctccatctcctcca 88
            ||||||||||||||| ||||||||
Sbjct: 2408 cctcgtctttctccacctcctcca 2385
to top
>emb|X78287.1|CLJOP2D C.lacryma-jobi (cv Adlay) Opaque 2 gene
          Length = 4569

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 71  ctttctccatctcctccaaa 90
           ||||||||||||||||||||
Sbjct: 898 ctttctccatctcctccaaa 917
to top
>emb|CR759788.7| Zebrafish DNA sequence from clone CH211-153F13, complete sequence
          Length = 197075

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     cctttccccctctctttcct 51
              ||||||||||||||||||||
Sbjct: 141332 cctttccccctctctttcct 141313
to top
>gb|AC153012.4| Mus musculus BAC clone RP23-302F19 from chromosome 9, complete sequence
          Length = 196764

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     ccctatcctttccccctctc 45
              ||||||||||||||||||||
Sbjct: 119060 ccctatcctttccccctctc 119041
to top
>gb|AE006001.1| Caulobacter crescentus CB15 section 327 of 359 of the complete
           genome
          Length = 11188

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 341 cgtcctgtcgaacgccggca 360
           ||||||||||||||||||||
Sbjct: 586 cgtcctgtcgaacgccggca 567
to top
>gb|AC092860.39| Pan troglodytes clone rp43-125j14, complete sequence
          Length = 160656

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    tgtggccaggcgtcctgtcg 350
              ||||||||||||||||||||
Sbjct: 116336 tgtggccaggcgtcctgtcg 116355
to top
>gb|AC007961.32| Mus musculus strain 129S6/SvEvTac clone rp21-594l4 map 10, complete
             sequence
          Length = 180585

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    tcccctatcctttccccctc 43
             ||||||||||||||||||||
Sbjct: 12949 tcccctatcctttccccctc 12930
to top
>gb|AC005302.70| Mus musculus strain 129S6/SvEvTac chromosome 10 clone rp21-481n4,
             complete sequence
          Length = 204653

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    tcccctatcctttccccctc 43
             ||||||||||||||||||||
Sbjct: 32653 tcccctatcctttccccctc 32672
to top
>gb|AC069282.6| Homo sapiens BAC clone RP11-61L9 from 7, complete sequence
          Length = 175938

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 18     tccccctcccctatcctttccccctctc 45
              ||||||||||||  ||||||||||||||
Sbjct: 110779 tccccctccccttccctttccccctctc 110806
to top
>gb|AF442967.1| Triticum aestivum clone WAS-3a thaumatin-like protein mRNA,
           complete cds
          Length = 925

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 307 tcgtcaaccggtgcgcatacacggtgtggccaggcg 342
           |||||||||| ||| | |||||||||||||| ||||
Sbjct: 146 tcgtcaaccgttgctcctacacggtgtggccgggcg 181
to top
>gb|AC154588.2| Mus musculus BAC clone RP23-363L9 from chromosome 16, complete sequence
          Length = 200787

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     ttctccatctcctccaaatc 92
              ||||||||||||||||||||
Sbjct: 137628 ttctccatctcctccaaatc 137609
to top
>gb|AC079308.15| Homo sapiens 3 BAC RP11-57P12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 171779

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    tttccccctctctttcctgt 53
             ||||||||||||||||||||
Sbjct: 61430 tttccccctctctttcctgt 61449
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 355     ccggcaccgcgcggctcggc 374
               ||||||||||||||||||||
Sbjct: 3568631 ccggcaccgcgcggctcggc 3568612
to top
>emb|CR353642.1| Gallus gallus finished cDNA, clone ChEST932h1
          Length = 1406

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 262  tccttttgatttcatggaga 281
            ||||||||||||||||||||
Sbjct: 1030 tccttttgatttcatggaga 1049
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 20       cccctcccctatcctttccccctc 43
                |||||||||| |||||||||||||
Sbjct: 19723003 cccctcccctctcctttccccctc 19723026
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 23       ctcccctatcctttccccctctct 46
                ||||||| ||||||||||||||||
Sbjct: 19028151 ctcccctttcctttccccctctct 19028174
to top
>gb|AC093028.13| Homo sapiens 12 BAC RP11-604N13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 153517

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 17     ttccccctcccctatcctttcccc 40
              ||||||||||||| ||||||||||
Sbjct: 131762 ttccccctcccctctcctttcccc 131785
to top
>gb|AC105914.4| Homo sapiens BAC clone RP13-577H12 from 4, complete sequence
          Length = 91995

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    atcctttccccctctctttcctgt 53
             |||||||||||||| |||||||||
Sbjct: 43657 atcctttccccctcactttcctgt 43680
to top
>gb|AC093761.3| Homo sapiens BAC clone RP11-89I4 from 4, complete sequence
          Length = 155154

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    cctttccccctctctttcct 51
             ||||||||||||||||||||
Sbjct: 76637 cctttccccctctctttcct 76656
to top
>gb|AC069205.6| Homo sapiens BAC clone RP11-735P12 from 2, complete sequence
          Length = 132242

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tttccccctctctttcctgt 53
             ||||||||||||||||||||
Sbjct: 83840 tttccccctctctttcctgt 83821
to top
>gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell Park Cancer Institute Mouse BAC)
              complete sequence
          Length = 204950

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 30     atcctttccccctctctttcctgt 53
              ||||||||||||||||| ||||||
Sbjct: 117502 atcctttccccctctctctcctgt 117479
to top
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0430F03
          Length = 183095

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 23     ctcccctatcctttccccctctct 46
              ||||||| ||||||||||||||||
Sbjct: 130136 ctcccctttcctttccccctctct 130159
to top
>emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, complete sequence
          Length = 145569

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    cctttccccctctctttcct 51
             ||||||||||||||||||||
Sbjct: 60154 cctttccccctctctttcct 60173
to top
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0007M04
          Length = 176293

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 20    cccctcccctatcctttccccctc 43
             |||||||||| |||||||||||||
Sbjct: 51954 cccctcccctctcctttccccctc 51977
to top
>dbj|AB024026.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15O15
          Length = 23026

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    ctcgtctttctccatctcct 85
             ||||||||||||||||||||
Sbjct: 14903 ctcgtctttctccatctcct 14884
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 177     gcacgcgcttgccgccgagc 196
               ||||||||||||||||||||
Sbjct: 1068176 gcacgcgcttgccgccgagc 1068157
to top
>gb|AY785495.1| Arabidopsis thaliana At5g37020 gene, promoter region
          Length = 2500

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ctcgtctttctccatctcct 85
            ||||||||||||||||||||
Sbjct: 2377 ctcgtctttctccatctcct 2358
to top
>gb|AF170726.2| Myxoma virus strain Lausanne, complete genome
          Length = 161773

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   tccttttgatttcatggaga 281
             ||||||||||||||||||||
Sbjct: 16750 tccttttgatttcatggaga 16731
to top
>gb|AC122424.4| Mus musculus BAC clone RP24-173E19 from 8, complete sequence
          Length = 175181

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 19    ccccctcccctatcctttccccctctct 46
             ||||||||||| ||||| ||||||||||
Sbjct: 33825 ccccctcccctttccttcccccctctct 33798
to top
>gb|AC142262.3| Mus musculus BAC clone RP24-486I4 from 8, complete sequence
          Length = 204183

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 19    ccccctcccctatcctttccccctctct 46
             ||||||||||| ||||| ||||||||||
Sbjct: 33137 ccccctcccctttccttcccccctctct 33164
to top
>gb|AC122229.4| Mus musculus BAC clone RP23-132F18 from 8, complete sequence
          Length = 167956

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    cctcccctatcctttccccctctc 45
             ||||||| ||||||||||||||||
Sbjct: 11387 cctcccccatcctttccccctctc 11364
to top
>gb|AC168267.1| Mus musculus BAC clone RP23-431L24 from chromosome 3, complete sequence
          Length = 187466

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   aagagtgagagtgaggagta 152
             ||||||||||||||||||||
Sbjct: 58820 aagagtgagagtgaggagta 58839
to top
>gb|AC139295.5| Mus musculus BAC clone RP24-131B6 from chromosome 1, complete sequence
          Length = 175592

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 17     ttccccctcccctatcctttccccctct 44
              ||||||||||||| ||||||| ||||||
Sbjct: 165267 ttccccctcccctttcctttctccctct 165240
to top
>gb|AC133516.3| Mus musculus BAC clone RP23-260G15 from chromosome 10, complete sequence
          Length = 203750

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 22     cctcccctatcctttccccctctc 45
              |||||||||||||||||| |||||
Sbjct: 177904 cctcccctatcctttcccgctctc 177881
to top
>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete
              sequence
          Length = 220275

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     tcccctatcctttccccctc 43
              ||||||||||||||||||||
Sbjct: 200564 tcccctatcctttccccctc 200583


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,252,397
Number of Sequences: 3902068
Number of extensions: 3252397
Number of successful extensions: 78247
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77348
Number of HSP's gapped (non-prelim): 895
length of query: 384
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 362
effective length of database: 17,147,199,772
effective search space: 6207286317464
effective search space used: 6207286317464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top