| Clone Name | bast57g03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ585989.1| Triticum aestivum partial mRNA for cytochrome P450-like protein Length = 1515 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 128 ctccctccggggccgtgcccgtggccggtggtagg 162 ||||| ||||| ||||||||||||||||||||||| Sbjct: 85 ctcccgccgggcccgtgcccgtggccggtggtagg 119
>gb|DQ409175.1| Bambusa ventricosa cytochrome P450 mRNA, complete cds Length = 1913 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 306 gggaggtgctcaagaagcaggacgagatcttcgcgtcccgcc 347 |||||||||||||||||||||||| | ||||| |||||||| Sbjct: 455 gggaggtgctcaagaagcaggacgccaacttcgtgtcccgcc 496
>ref|NM_202617.1| Arabidopsis thaliana S-adenosylmethionine-dependent methyltransferase/ catalytic AT3G20650 transcript variant AT3G20650.2 mRNA, complete cds Length = 1486 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 40 gctctgctcctcctccttcttcca 63 |||||||||||||||||||||||| Sbjct: 121 gctctgctcctcctccttcttcca 144
>ref|NM_112956.3| Arabidopsis thaliana S-adenosylmethionine-dependent methyltransferase/ catalytic AT3G20650 transcript variant AT3G20650.1 mRNA, complete cds Length = 1543 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 40 gctctgctcctcctccttcttcca 63 |||||||||||||||||||||||| Sbjct: 121 gctctgctcctcctccttcttcca 144
>emb|AJ585991.1| Triticum aestivum partial mRNA for cytochrome P450-like protein Length = 1532 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 128 ctccctccggggccgtgcccgtggccggtggt 159 ||||| ||||| |||||||||||||||||||| Sbjct: 85 ctcccaccgggcccgtgcccgtggccggtggt 116
>emb|AJ585990.1| Triticum aestivum partial mRNA for cytochrome P450-like protein Length = 1532 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 128 ctccctccggggccgtgcccgtggccggtggt 159 ||||| ||||| |||||||||||||||||||| Sbjct: 85 ctcccaccgggcccgtgcccgtggccggtggt 116
>emb|AJ585988.1| Triticum aestivum partial mRNA for cytochrome P450-like protein Length = 1532 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 128 ctccctccggggccgtgcccgtggccggtggt 159 ||||| ||||| |||||||||||||||||||| Sbjct: 85 ctcccaccgggcccgtgcccgtggccggtggt 116
>gb|BT006067.1| Arabidopsis thaliana clone U20104 unknown protein (At3g20650) mRNA, complete cds Length = 1144 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 40 gctctgctcctcctccttcttcca 63 |||||||||||||||||||||||| Sbjct: 32 gctctgctcctcctccttcttcca 55
>emb|BX822732.1|CNS0A74C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1256 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 40 gctctgctcctcctccttcttcca 63 |||||||||||||||||||||||| Sbjct: 111 gctctgctcctcctccttcttcca 134
>emb|BX823608.1|CNS0A6NR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1416 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 40 gctctgctcctcctccttcttcca 63 |||||||||||||||||||||||| Sbjct: 52 gctctgctcctcctccttcttcca 75
>gb|BT005804.1| Arabidopsis thaliana clone RAFL14-85-K11 (R20104) unknown protein (At3g20650) mRNA, complete cds Length = 1326 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 40 gctctgctcctcctccttcttcca 63 |||||||||||||||||||||||| Sbjct: 127 gctctgctcctcctccttcttcca 150
>dbj|AP002034.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: F3H11 Length = 33442 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 40 gctctgctcctcctccttcttcca 63 |||||||||||||||||||||||| Sbjct: 17913 gctctgctcctcctccttcttcca 17890
>ref|XM_538287.2| PREDICTED: Canis familiaris similar to Thyrotropin-releasing hormone degrading ectoenzyme (TRH-degrading ectoenzyme) (TRH-DE) (TRH-specific aminopeptidase) (Thyroliberinase) (Pyroglutamyl-peptidase II) (PAP-II) (LOC481166), mRNA Length = 585 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 ccggggccgtgcccgtggccgg 155 |||||||||||||||||||||| Sbjct: 401 ccggggccgtgcccgtggccgg 422
>emb|AL365264.13| Human DNA sequence from clone RP11-287H7 on chromosome 1, complete sequence Length = 16665 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 215 catcaggtgatggagaagatga 236 |||||||||||||||||||||| Sbjct: 10261 catcaggtgatggagaagatga 10282
>gb|AE009858.1|AE009858 Pyrobaculum aerophilum strain IM2 section 113 of 201 of the complete genome Length = 14169 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 ctctgctcctcctccttcttcc 62 |||||||||||||||||||||| Sbjct: 7103 ctctgctcctcctccttcttcc 7124
>gb|AE009809.1|AE009809 Pyrobaculum aerophilum strain IM2 section 64 of 201 of the complete genome Length = 12278 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 ctctgctcctcctccttcttcc 62 |||||||||||||||||||||| Sbjct: 7280 ctctgctcctcctccttcttcc 7301
>gb|AC109195.27| Mus musculus chromosome 15, clone RP24-212B11, complete sequence Length = 168270 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ctctgctcctcctccttcttc 61 ||||||||||||||||||||| Sbjct: 98640 ctctgctcctcctccttcttc 98660
>ref|XM_463099.1| Oryza sativa (japonica cultivar-group), mRNA Length = 435 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 cgccagggaggtgctcaagaagcaggacg 329 |||||||||||||||||||| ||| |||| Sbjct: 54 cgccagggaggtgctcaagacgcacgacg 82
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 cgccagggaggtgctcaagaagcaggacg 329 |||||||||||||||||||| ||| |||| Sbjct: 116030 cgccagggaggtgctcaagacgcacgacg 116058
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 tcgcctgcttccgcctcggcg 266 ||||||||||||||||||||| Sbjct: 2434453 tcgcctgcttccgcctcggcg 2434433
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 301 cgccagggaggtgctcaagaagcaggacg 329 |||||||||||||||||||| ||| |||| Sbjct: 21771786 cgccagggaggtgctcaagacgcacgacg 21771758 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gccagggaggtgctcaagaagcaggacg 329 ||||||||||||||||||| ||| |||| Sbjct: 21931541 gccagggaggtgctcaagacgcacgacg 21931568 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgccagggaggtgctcaaga 320 |||||||||||||||||||| Sbjct: 21891688 cgccagggaggtgctcaaga 21891707
>ref|XM_538275.2| PREDICTED: Canis familiaris similar to solute carrier family 35, member E2 (LOC481154), mRNA Length = 798 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ggcgctccctccggggccgtgcccg 148 ||||||||||||||||||| ||||| Sbjct: 138 ggcgctccctccggggccgagcccg 114
>gb|AC098744.3| Mus musculus BAC clone RP23-122P15 from 8, complete sequence Length = 204779 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 ctgctcctcctccttcttcca 63 ||||||||||||||||||||| Sbjct: 172965 ctgctcctcctccttcttcca 172985
>gb|AC123039.3| Mus musculus BAC clone RP24-531I15 from 8, complete sequence Length = 147370 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 ctgctcctcctccttcttcca 63 ||||||||||||||||||||| Sbjct: 53604 ctgctcctcctccttcttcca 53624
>gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 genomic sequence, complete sequence Length = 163108 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 301 cgccagggaggtgctcaagaagcaggacg 329 |||||||||||||||||||| ||| |||| Sbjct: 160031 cgccagggaggtgctcaagacgcacgacg 160003
>emb|CR693854.2|CNS0FYBU Tetraodon nigroviridis full-length cDNA Length = 1505 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 37 ggggctctgctcctcctccttcttccatg 65 ||||||||||||||||||| ||| ||||| Sbjct: 479 ggggctctgctcctcctccgtctcccatg 507
>ref|XM_795025.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC581083 (LOC581083), mRNA Length = 1197 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ctctgctcctcctccttcttc 61 ||||||||||||||||||||| Sbjct: 755 ctctgctcctcctccttcttc 735
>ref|XM_692270.1| PREDICTED: Danio rerio similar to bicaudal D homolog 1 isoform 1 (LOC568909), mRNA Length = 3243 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 ggctctgctcctcctccttct 59 ||||||||||||||||||||| Sbjct: 3218 ggctctgctcctcctccttct 3198
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cctccggggccgtgcccgtgg 151 ||||||||||||||||||||| Sbjct: 83777 cctccggggccgtgcccgtgg 83797
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 301 cgccagggaggtgctcaagaagcaggacg 329 |||||||||||||||||||| ||| |||| Sbjct: 21764815 cgccagggaggtgctcaagacgcacgacg 21764787 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gccagggaggtgctcaagaagcaggacg 329 ||||||||||||||||||| ||| |||| Sbjct: 21924570 gccagggaggtgctcaagacgcacgacg 21924597 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgccagggaggtgctcaaga 320 |||||||||||||||||||| Sbjct: 21884717 cgccagggaggtgctcaaga 21884736
>emb|X97257.1|PRVULGNS Suid herpesvirus 1 strain Kaplan UL[5,6,7,8,8.5,9,10,11,12,13] genes Length = 11059 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cctccggggccgtgcccgtgg 151 ||||||||||||||||||||| Sbjct: 5427 cctccggggccgtgcccgtgg 5447
>emb|AJ937764.1| Uncultured Chloroflexi bacterium fosmid clone b1dcf1.3.f01 Length = 33281 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ccatgtggtggtgatggtggc 81 ||||||||||||||||||||| Sbjct: 30392 ccatgtggtggtgatggtggc 30412
>dbj|AP004524.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT08O18, TM0052a, complete sequence Length = 20200 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 41 ctctgctcctcctccttcttccatg 65 |||| |||||||||||||||||||| Sbjct: 4730 ctcttctcctcctccttcttccatg 4706
>gb|AC129093.34| Mus musculus strain C57BL/6J clone rp23-198m10 map 19, complete sequence Length = 190697 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 agctcaagttatttaacaag 193 |||||||||||||||||||| Sbjct: 157651 agctcaagttatttaacaag 157632
>ref|XM_480203.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3681 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 552 tctgctcctcctccttcttc 533
>ref|NM_184957.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1659 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gccagggaggtgctcaagaagcaggacg 329 ||||||||||||||||||| ||| |||| Sbjct: 292 gccagggaggtgctcaagacgcacgacg 319
>ref|NM_184832.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1539 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgccagggaggtgctcaaga 320 |||||||||||||||||||| Sbjct: 303 cgccagggaggtgctcaaga 322
>gb|AC107843.10| Mus musculus chromosome 1, clone RP23-306B14, complete sequence Length = 180315 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgctcctcctccttcttcc 62 |||||||||||||||||||| Sbjct: 66387 ctgctcctcctccttcttcc 66368
>gb|AC157991.5| Mus musculus chromosome 18, clone RP23-335B10, complete sequence Length = 198636 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ctcctcctccttcttccatg 65 |||||||||||||||||||| Sbjct: 26048 ctcctcctccttcttccatg 26029 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ctcctcctccttcttccatg 65 |||||||||||||||||||| Sbjct: 25890 ctcctcctccttcttccatg 25871
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gtggtggtgatggtggccgt 84 |||||||||||||||||||| Sbjct: 1069970 gtggtggtgatggtggccgt 1069951
>gb|AC102124.16| Mus musculus chromosome 18, clone RP23-188D1, complete sequence Length = 222450 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ctcctcctccttcttccatg 65 |||||||||||||||||||| Sbjct: 196052 ctcctcctccttcttccatg 196033 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ctcctcctccttcttccatg 65 |||||||||||||||||||| Sbjct: 195894 ctcctcctccttcttccatg 195875
>gb|AC102658.9| Mus musculus chromosome 1, clone RP23-82B23, complete sequence Length = 186097 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 105258 tctgctcctcctccttcttc 105277
>gb|AC131656.3| Mus musculus BAC clone RP23-233K19 from chromosome 17, complete sequence Length = 184763 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 102195 tctgctcctcctccttcttc 102176
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 gcaggacgagatcttcgcgt 341 |||||||||||||||||||| Sbjct: 2716144 gcaggacgagatcttcgcgt 2716125
>ref|XM_858780.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 10 (LOC476639), mRNA Length = 3682 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cctgcttccgcctcggcggcgtcc 272 ||||| |||||||||||||||||| Sbjct: 167 cctgcctccgcctcggcggcgtcc 144
>ref|XM_858759.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 9 (LOC476639), mRNA Length = 3769 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cctgcttccgcctcggcggcgtcc 272 ||||| |||||||||||||||||| Sbjct: 167 cctgcctccgcctcggcggcgtcc 144
>ref|XM_858739.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 8 (LOC476639), mRNA Length = 2394 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cctgcttccgcctcggcggcgtcc 272 ||||| |||||||||||||||||| Sbjct: 167 cctgcctccgcctcggcggcgtcc 144
>ref|XM_858718.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 7 (LOC476639), mRNA Length = 1562 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cctgcttccgcctcggcggcgtcc 272 ||||| |||||||||||||||||| Sbjct: 208 cctgcctccgcctcggcggcgtcc 185
>ref|XM_858693.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 6 (LOC476639), mRNA Length = 991 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cctgcttccgcctcggcggcgtcc 272 ||||| |||||||||||||||||| Sbjct: 167 cctgcctccgcctcggcggcgtcc 144
>ref|XM_858604.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 3, transcript variant 2 (LOC476639), mRNA Length = 3742 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 cctgcttccgcctcggcggcgtcc 272 ||||| |||||||||||||||||| Sbjct: 167 cctgcctccgcctcggcggcgtcc 144
>ref|XM_540916.2| PREDICTED: Canis familiaris similar to neural stem cell-derived dendrite regulator (LOC483795), mRNA Length = 1938 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 cggggccgtgcccgtggccggtgg 158 |||||||| ||||||||||||||| Sbjct: 1903 cggggccgggcccgtggccggtgg 1880
>ref|XM_570947.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNE03740) partial mRNA Length = 3332 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gtggtggtgatggtggccgt 84 |||||||||||||||||||| Sbjct: 2066 gtggtggtgatggtggccgt 2047
>gb|AC125132.4| Mus musculus BAC clone RP24-314B3 from chromosome 8, complete sequence Length = 190472 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgctcctcctccttcttcc 62 |||||||||||||||||||| Sbjct: 148637 ctgctcctcctccttcttcc 148618
>gb|AC122296.4| Mus musculus BAC clone RP23-265P8 from 6, complete sequence Length = 211697 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 164499 tctgctcctcctccttcttc 164480
>gb|AC125354.4| Mus musculus BAC clone RP23-302B8 from 8, complete sequence Length = 159941 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ctgctcctcctccttcttcc 62 |||||||||||||||||||| Sbjct: 154490 ctgctcctcctccttcttcc 154509
>gb|AC165355.3| Mus musculus BAC clone RP23-129P10 from chromosome 6, complete sequence Length = 199100 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 177669 tctgctcctcctccttcttc 177688
>gb|AC163899.3| Mus musculus chromosome 1, clone RP24-383F13, complete sequence Length = 227890 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 161283 tctgctcctcctccttcttc 161302
>emb|AL358472.54| Human DNA sequence from clone RP11-422P24 on chromosome 1 Contains the 5' UTR of the gene for transcription repressor p66 beta component of the MeCP1 complex (P66beta), the KIAA0476 gene for a novel protein, the gene for transducer of regulated cAMP response element-binding protein (CREB) 2 (TORC2), the SLC39A1 gene for solute carrier family 39 (zinc transporter), member 1, the CREB3L4 gene for cAMP responsive element binding protein 3-like 4, the JTB gene for jumping translocation breakpoint, the RAB13 gene for RAB13, member RAS oncogene family, the RPS27 gene for ribosomal protein S27 (metallopanstimulin 1), the 3' end of the gene for nuclear pore membrane glycoprotein 210-like (LOC91181), a ribosomal protein S7 (RPS7) pseudogene and a CpG island, complete sequence Length = 175827 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 121071 tctgctcctcctccttcttc 121052
>emb|AL356278.8| Human DNA sequence from clone RP11-515J24 on chromosome 6, complete sequence Length = 182510 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ctctgctcctcctccttctt 60 |||||||||||||||||||| Sbjct: 68508 ctctgctcctcctccttctt 68527
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagctgccggcgttccggtg 210 |||||||||||||||||||| Sbjct: 3799272 aagctgccggcgttccggtg 3799291
>emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster for borrelidin biosynthesis Length = 74787 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gcctcggcggcgtccacgtc 277 |||||||||||||||||||| Sbjct: 58465 gcctcggcggcgtccacgtc 58446
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gtggtggtgatggtggccgt 84 |||||||||||||||||||| Sbjct: 3075736 gtggtggtgatggtggccgt 3075717
>gb|AC091672.11| Papio anubis clone rp41-367l20, complete sequence Length = 172406 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ggctctgctcctcctccttc 58 |||||||||||||||||||| Sbjct: 115448 ggctctgctcctcctccttc 115467
>dbj|AK131648.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1520402E24 product:unclassifiable, full insert sequence Length = 2856 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 1185 tctgctcctcctccttcttc 1204
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gtggtggtgatggtggccgt 84 |||||||||||||||||||| Sbjct: 3115715 gtggtggtgatggtggccgt 3115696 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gcttccgcctcggcggcgtc 271 |||||||||||||||||||| Sbjct: 2785672 gcttccgcctcggcggcgtc 2785691
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ccggggccgtgcccgtggcc 153 |||||||||||||||||||| Sbjct: 92048 ccggggccgtgcccgtggcc 92067
>dbj|AK041094.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530082K19 product:unclassifiable, full insert sequence Length = 4028 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 agctcaagttatttaacaag 193 |||||||||||||||||||| Sbjct: 1123 agctcaagttatttaacaag 1142
>gb|BC096484.1| Mus musculus cDNA clone IMAGE:5293208 Length = 2529 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gctccctccggggccgtgcc 146 |||||||||||||||||||| Sbjct: 15 gctccctccggggccgtgcc 34
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 cggcggcgtccacgtcatcccgat 285 |||||||||||||||| ||||||| Sbjct: 21434672 cggcggcgtccacgtcgtcccgat 21434649 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 3511837 tctgctcctcctccttcttc 3511856
>gb|AY968215.1| Rubella virus strain RVI/Anhui.CHN/00 structural protein gene, complete cds Length = 3192 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tggtgatggtggccgtaatg 88 |||||||||||||||||||| Sbjct: 989 tggtgatggtggccgtaatg 970
>gb|AY968213.1| Rubella virus strain RVI/SHANDONG.CHN/00 structural protein gene, complete cds Length = 3192 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tggtgatggtggccgtaatg 88 |||||||||||||||||||| Sbjct: 989 tggtgatggtggccgtaatg 970
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgccagggaggtgctcaaga 320 |||||||||||||||||||| Sbjct: 117328 cgccagggaggtgctcaaga 117309 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 302 gccagggaggtgctcaagaagcaggacg 329 ||||||||||||||||||| ||| |||| Sbjct: 77475 gccagggaggtgctcaagacgcacgacg 77448
>ref|XM_215848.3| PREDICTED: Rattus norvegicus similar to chromosome 20 open reading frame 116 (predicted) (LOC296162), mRNA Length = 2170 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gctcctcctccttcttccat 64 |||||||||||||||||||| Sbjct: 559 gctcctcctccttcttccat 540
>emb|AJ583532.1| Triticum aestivum mRNA for cytochrome P450 (CYP98A12 gene) Length = 1774 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 ccggggccgtgcccgtggccggtg 157 ||||||||| |||||||||||||| Sbjct: 163 ccggggccgcgcccgtggccggtg 186
>dbj|BS000163.1| Pan troglodytes chromosome 22 clone:RP43-010B02, map 22, complete sequences Length = 182740 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tcctccttcttccatgtggt 69 |||||||||||||||||||| Sbjct: 100916 tcctccttcttccatgtggt 100935
>emb|BX648453.1|HSM808601 Homo sapiens mRNA; cDNA DKFZp686I20269 (from clone DKFZp686I20269) Length = 2387 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ctctgctcctcctccttctt 60 |||||||||||||||||||| Sbjct: 1656 ctctgctcctcctccttctt 1675
>emb|AL732429.11| Mouse DNA sequence from clone RP23-89N11 on chromosome X, complete sequence Length = 164991 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 152681 tctgctcctcctccttcttc 152662
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 cggcggcgtccacgtcatcccgat 285 |||||||||||||||| ||||||| Sbjct: 38667 cggcggcgtccacgtcgtcccgat 38644
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 cggcggcgtccacgtcatcccgat 285 |||||||||||||||| ||||||| Sbjct: 134597 cggcggcgtccacgtcgtcccgat 134574
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498E12 Length = 153523 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 145256 tctgctcctcctccttcttc 145275
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 67554 tctgctcctcctccttcttc 67573
>dbj|AK111441.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-A07, full insert sequence Length = 2154 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgccagggaggtgctcaaga 320 |||||||||||||||||||| Sbjct: 603 cgccagggaggtgctcaaga 622
>dbj|AK102356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091H10, full insert sequence Length = 3682 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 553 tctgctcctcctccttcttc 534
>dbj|AK069017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170D06, full insert sequence Length = 1763 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gccagggaggtgctcaagaagcaggacg 329 ||||||||||||||||||| ||| |||| Sbjct: 342 gccagggaggtgctcaagacgcacgacg 369
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cggggccgtgcccgtggccg 154 |||||||||||||||||||| Sbjct: 1554514 cggggccgtgcccgtggccg 1554495
>emb|CT476832.2| Pig DNA sequence from clone XX-BE284E13 on chromosome 11, complete sequence Length = 180778 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ctgctcctcctccttcttcc 62 |||||||||||||||||||| Sbjct: 89940 ctgctcctcctccttcttcc 89959
>emb|AL954712.9| Mouse DNA sequence from clone RP23-241M12 on chromosome 2, complete sequence Length = 65039 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tctgctcctcctccttcttc 61 |||||||||||||||||||| Sbjct: 32817 tctgctcctcctccttcttc 32836
>gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, complete sequence Length = 226189 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 agctcaagttatttaacaag 193 |||||||||||||||||||| Sbjct: 46642 agctcaagttatttaacaag 46623
>gb|AC122127.31| Mus musculus chromosome 1, clone RP24-401K1, complete sequence Length = 193324 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 atcaggtgatggagaagatg 235 |||||||||||||||||||| Sbjct: 64786 atcaggtgatggagaagatg 64767
>gb|AC171328.2| Mus musculus chromosome 1, clone wi1-817D1, complete sequence Length = 41955 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 agctcaagttatttaacaag 193 |||||||||||||||||||| Sbjct: 5326 agctcaagttatttaacaag 5345 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,302,624 Number of Sequences: 3902068 Number of extensions: 3302624 Number of successful extensions: 125767 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125150 Number of HSP's gapped (non-prelim): 617 length of query: 347 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 325 effective length of database: 17,147,199,772 effective search space: 5572839925900 effective search space used: 5572839925900 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)