ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast57f11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB076982.1| Avena sativa AsHHT3 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 3, complete cds Length = 1659 Score = 299 bits (151), Expect = 4e-78 Identities = 254/288 (88%), Gaps = 3/288 (1%) Strand = Plus / Plus Query: 142 agatgaagatcacggtacggggatcgacggtcgtggtgccggcggaggagacgccgcggc 201 |||||||||||||||| ||| | |||||||| ||||||||||||| |||||| |||||| Sbjct: 5 agatgaagatcacggtgcggagctcgacggtggtggtgccggcggcggagaccccgcggg 64 Query: 202 tccggctgtggaacgccaacccggacctggtcgtgccgcggttccacaccccgagcgtct 261 | ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 65 tgcggctgtggaacgccaacccggacctggtggtgccgcggttccacacgcccagcgtct 124 Query: 262 acttcttccggcgcggcgcgggggaggaggaggcggaccgctacttcgacgcggagcgga 321 |||||| ||| ||||||| | || | || ||| | ||||||||||||||| ||| Sbjct: 125 acttctaccgccgcggcg---gcgacggcgacgcgtgctgctacttcgacgcggcaagga 181 Query: 322 tgcgccgggcgctggcggaggcgttggtgcccttctacccgatggcggngcggctggccc 381 |||| || ||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 182 tgcggcgcgcgctggcggaggcgctggtgcccttctacccgatggcggggcggctggccc 241 Query: 382 gcgacgaggacgggcgcgtggagatcgactgcaacgcggaaggggtgc 429 |||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 242 acgacgaggacgggcgcgtggagatcgactgcaacgctgagggggtgc 289
>ref|XM_466682.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1671 Score = 258 bits (130), Expect = 1e-65 Identities = 251/291 (86%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 142 agatgaagatcacggtacggggatcgacggtcgtggtgccggcggaggagacgccgcggc 201 |||||||||||| || ||||| |||||| | ||| |||||||||||||||||||||| Sbjct: 106 agatgaagatcaacgtgcgggggtcgacgatggtgcggccggcggaggagacgccgcggg 165 Query: 202 tccggctgtggaacgccaacccggacctggtcgtgccgcggttccacaccccgagcgtct 261 | ||||||||||| | | || ||||||||| ||||||||||||||||| |||||||||| Sbjct: 166 tgaggctgtggaactctagcctggacctggtggtgccgcggttccacacgccgagcgtct 225 Query: 262 acttcttccggcgcggcgcgggggaggaggaggcggaccg---ctacttcgacgcggagc 318 |||||||||||||||||| || || || || || || | | ||||||||||| |||| Sbjct: 226 acttcttccggcgcggcgaggcggcggcggcggagggcgggagctacttcgacggggaga 285 Query: 319 ggatgcgccgggcgctggcggaggcgttggtgcccttctacccgatggcggngcggctgg 378 ||||||| |||||||||||||||||| |||| || |||||||||||||||| |||||||| Sbjct: 286 ggatgcggcgggcgctggcggaggcgctggttccgttctacccgatggcggggcggctgg 345 Query: 379 cccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaaggggtgc 429 | | |||||||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 346 cgcacgacgaggacggccgcgtggagatcgactgcaacggggaaggcgtgc 396
>ref|XM_506864.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_A05.15 mRNA Length = 1716 Score = 258 bits (130), Expect = 1e-65 Identities = 251/291 (86%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 142 agatgaagatcacggtacggggatcgacggtcgtggtgccggcggaggagacgccgcggc 201 |||||||||||| || ||||| |||||| | ||| |||||||||||||||||||||| Sbjct: 106 agatgaagatcaacgtgcgggggtcgacgatggtgcggccggcggaggagacgccgcggg 165 Query: 202 tccggctgtggaacgccaacccggacctggtcgtgccgcggttccacaccccgagcgtct 261 | ||||||||||| | | || ||||||||| ||||||||||||||||| |||||||||| Sbjct: 166 tgaggctgtggaactctagcctggacctggtggtgccgcggttccacacgccgagcgtct 225 Query: 262 acttcttccggcgcggcgcgggggaggaggaggcggaccg---ctacttcgacgcggagc 318 |||||||||||||||||| || || || || || || | | ||||||||||| |||| Sbjct: 226 acttcttccggcgcggcgaggcggcggcggcggagggcgggagctacttcgacggggaga 285 Query: 319 ggatgcgccgggcgctggcggaggcgttggtgcccttctacccgatggcggngcggctgg 378 ||||||| |||||||||||||||||| |||| || |||||||||||||||| |||||||| Sbjct: 286 ggatgcggcgggcgctggcggaggcgctggttccgttctacccgatggcggggcggctgg 345 Query: 379 cccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaaggggtgc 429 | | |||||||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 346 cgcacgacgaggacggccgcgtggagatcgactgcaacggggaaggcgtgc 396
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 258 bits (130), Expect = 1e-65 Identities = 251/291 (86%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 142 agatgaagatcacggtacggggatcgacggtcgtggtgccggcggaggagacgccgcggc 201 |||||||||||| || ||||| |||||| | ||| |||||||||||||||||||||| Sbjct: 24100327 agatgaagatcaacgtgcgggggtcgacgatggtgcggccggcggaggagacgccgcggg 24100386 Query: 202 tccggctgtggaacgccaacccggacctggtcgtgccgcggttccacaccccgagcgtct 261 | ||||||||||| | | || ||||||||| ||||||||||||||||| |||||||||| Sbjct: 24100387 tgaggctgtggaactctagcctggacctggtggtgccgcggttccacacgccgagcgtct 24100446 Query: 262 acttcttccggcgcggcgcgggggaggaggaggcggaccg---ctacttcgacgcggagc 318 |||||||||||||||||| || || || || || || | | ||||||||||| |||| Sbjct: 24100447 acttcttccggcgcggcgaggcggcggcggcggagggcgggagctacttcgacggggaga 24100506 Query: 319 ggatgcgccgggcgctggcggaggcgttggtgcccttctacccgatggcggngcggctgg 378 ||||||| |||||||||||||||||| |||| || |||||||||||||||| |||||||| Sbjct: 24100507 ggatgcggcgggcgctggcggaggcgctggttccgttctacccgatggcggggcggctgg 24100566 Query: 379 cccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaaggggtgc 429 | | |||||||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 24100567 cgcacgacgaggacggccgcgtggagatcgactgcaacggggaaggcgtgc 24100617 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 gcggcgcgggggaggaggagg 294 ||||||||||||||||||||| Sbjct: 35628715 gcggcgcgggggaggaggagg 35628735
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 258 bits (130), Expect = 1e-65 Identities = 251/291 (86%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 142 agatgaagatcacggtacggggatcgacggtcgtggtgccggcggaggagacgccgcggc 201 |||||||||||| || ||||| |||||| | ||| |||||||||||||||||||||| Sbjct: 59068 agatgaagatcaacgtgcgggggtcgacgatggtgcggccggcggaggagacgccgcggg 59127 Query: 202 tccggctgtggaacgccaacccggacctggtcgtgccgcggttccacaccccgagcgtct 261 | ||||||||||| | | || ||||||||| ||||||||||||||||| |||||||||| Sbjct: 59128 tgaggctgtggaactctagcctggacctggtggtgccgcggttccacacgccgagcgtct 59187 Query: 262 acttcttccggcgcggcgcgggggaggaggaggcggaccg---ctacttcgacgcggagc 318 |||||||||||||||||| || || || || || || | | ||||||||||| |||| Sbjct: 59188 acttcttccggcgcggcgaggcggcggcggcggagggcgggagctacttcgacggggaga 59247 Query: 319 ggatgcgccgggcgctggcggaggcgttggtgcccttctacccgatggcggngcggctgg 378 ||||||| |||||||||||||||||| |||| || |||||||||||||||| |||||||| Sbjct: 59248 ggatgcggcgggcgctggcggaggcgctggttccgttctacccgatggcggggcggctgg 59307 Query: 379 cccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaaggggtgc 429 | | |||||||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 59308 cgcacgacgaggacggccgcgtggagatcgactgcaacggggaaggcgtgc 59358
>dbj|AK104319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-E04, full insert sequence Length = 1671 Score = 258 bits (130), Expect = 1e-65 Identities = 251/291 (86%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 142 agatgaagatcacggtacggggatcgacggtcgtggtgccggcggaggagacgccgcggc 201 |||||||||||| || ||||| |||||| | ||| |||||||||||||||||||||| Sbjct: 106 agatgaagatcaacgtgcgggggtcgacgatggtgcggccggcggaggagacgccgcggg 165 Query: 202 tccggctgtggaacgccaacccggacctggtcgtgccgcggttccacaccccgagcgtct 261 | ||||||||||| | | || ||||||||| ||||||||||||||||| |||||||||| Sbjct: 166 tgaggctgtggaactctagcctggacctggtggtgccgcggttccacacgccgagcgtct 225 Query: 262 acttcttccggcgcggcgcgggggaggaggaggcggaccg---ctacttcgacgcggagc 318 |||||||||||||||||| || || || || || || | | ||||||||||| |||| Sbjct: 226 acttcttccggcgcggcgaggcggcggcggcggagggcgggagctacttcgacggggaga 285 Query: 319 ggatgcgccgggcgctggcggaggcgttggtgcccttctacccgatggcggngcggctgg 378 ||||||| |||||||||||||||||| |||| || |||||||||||||||| |||||||| Sbjct: 286 ggatgcggcgggcgctggcggaggcgctggttccgttctacccgatggcggggcggctgg 345 Query: 379 cccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaaggggtgc 429 | | |||||||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 346 cgcacgacgaggacggccgcgtggagatcgactgcaacggggaaggcgtgc 396
>dbj|AK060705.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G09, full insert sequence Length = 1714 Score = 236 bits (119), Expect = 5e-59 Identities = 249/291 (85%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 142 agatgaagatcacggtacggggatcgacggtcgtggtgccggcggaggagacgccgcggc 201 |||||||||||| || ||||| |||||| | ||| |||||||||||||||||||||| Sbjct: 106 agatgaagatcaacgtgcgggggtcgacgatggtgcggccggcggaggagacgccgcggg 165 Query: 202 tccggctgtggaacgccaacccggacctggtcgtgccgcggttccacaccccgagcgtct 261 | ||||||||||| | | || ||||||||| ||||||||||||||||| |||||||||| Sbjct: 166 tgaggctgtggaactctagcctggacctggtggtgccgcggttccacacgccgagcgtct 225 Query: 262 acttcttccggcgcggcgcgggggaggaggaggcggaccg---ctacttcgacgcggagc 318 |||||||||||||||||| || || || || || || | | ||||||||||| |||| Sbjct: 226 acttcttccggcgcggcgaggcggcggcggcggagggcgggagctacttcgacggggaga 285 Query: 319 ggatgcgccgggcgctggcggaggcgttggtgcccttctacccgatggcggngcggctgg 378 ||||||| |||||||||||||||||| |||| || |||||||||||||||| |||||||| Sbjct: 286 ggatgcggcgggcgctggcggaggcgctggttccgttctacccgatggcggggcggctgg 345 Query: 379 cccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaaggggtgc 429 | | |||||||||||| ||||||||| ||||||||||| |||||| |||| Sbjct: 346 cgcacgacgaggacggccgcgtggag--cgactgcaacggggaaggcgtgc 394
>dbj|AB076980.1| Avena sativa AsHHT1 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 1, complete cds Length = 1755 Score = 194 bits (98), Expect = 2e-46 Identities = 121/129 (93%) Strand = Plus / Plus Query: 301 gctacttcgacgcggagcggatgcgccgggcgctggcggaggcgttggtgcccttctacc 360 ||||||||||||||| | ||||||| || ||||||||||||||| ||||||||||||||| Sbjct: 288 gctacttcgacgcggggaggatgcggcgcgcgctggcggaggcgctggtgcccttctacc 347 Query: 361 cgatggcggngcggctggcccgcgacgaggacgggcgcgtggagatcgactgcaacgcgg 420 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 348 cgatggcggggcggctggcccacgacgaggacgggcgcgtggagatcgactgcaacgcgg 407 Query: 421 aaggggtgc 429 | ||||||| Sbjct: 408 agggggtgc 416 Score = 163 bits (82), Expect = 6e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 142 agatgaagatcacggtacggggatcgacggtcgtggtgccggcggaggagacgccgcggc 201 |||||||||||||||| ||| | |||||||| ||||||||||||| |||||| |||||| Sbjct: 129 agatgaagatcacggtgcggagctcgacggtggtggtgccggcggcggagaccccgcggg 188 Query: 202 tccggctgtggaacgccaacccggacctggtcgtgccgcggttccacaccccgagcgtct 261 | || |||||||||||||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 189 tgcgtctgtggaacgccaacccggacctggtggtgccgcggttccacacgcccagcgtct 248 Query: 262 acttcttccggcgcggcg 279 |||||| ||| ||||||| Sbjct: 249 acttctaccgccgcggcg 266
>dbj|AB076981.1| Avena sativa AsHHT2 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 2, complete cds Length = 1770 Score = 178 bits (90), Expect = 1e-41 Identities = 126/138 (91%) Strand = Plus / Plus Query: 142 agatgaagatcacggtacggggatcgacggtcgtggtgccggcggaggagacgccgcggc 201 |||||||||||||||| || | ||||||| ||||||||||||| |||||||||||||| Sbjct: 152 agatgaagatcacggtgcgaagcacgacggtggtggtgccggcggcggagacgccgcggc 211 Query: 202 tccggctgtggaacgccaacccggacctggtcgtgccgcggttccacaccccgagcgtct 261 | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 212 tgcggctgtggaacgccaacccggacctggtcgtgccgcggttccacacgcccagcgtct 271 Query: 262 acttcttccggcgcggcg 279 |||||| ||| ||||||| Sbjct: 272 acttctaccgccgcggcg 289 Score = 165 bits (83), Expect = 1e-37 Identities = 109/118 (92%) Strand = Plus / Plus Query: 301 gctacttcgacgcggagcggatgcgccgggcgctggcggaggcgttggtgcccttctacc 360 ||||||||||||||| | ||||||| || ||||||||||||||| ||||| ||||||||| Sbjct: 308 gctacttcgacgcggcgaggatgcggcgcgcgctggcggaggcgctggtgaccttctacc 367 Query: 361 cgatggcggngcggctggcccgcgacgaggacgggcgcgtggagatcgactgcaacgc 418 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 368 cgatggcgggccggctggcccacgacgaggacgggcgcgtggagatcgactgcaacgc 425
>ref|XM_473058.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 139 bits (70), Expect = 8e-30 Identities = 111/125 (88%) Strand = Plus / Plus Query: 305 cttcgacgcggagcggatgcgccgggcgctggcggaggcgttggtgcccttctacccgat 364 |||||||| |||||||||||| || ||||||||||||||| | ||||| ||||||||||| Sbjct: 165 cttcgacggggagcggatgcggcgcgcgctggcggaggcgctcgtgccgttctacccgat 224 Query: 365 ggcggngcggctggcccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaagg 424 ||| | |||||| || ||||||||||||||| | || |||||||||||||||| |||||| Sbjct: 225 ggccgggcggctcgcgcgcgacgaggacgggagggtcgagatcgactgcaacggggaagg 284 Query: 425 ggtgc 429 ||||| Sbjct: 285 ggtgc 289 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 179 gccggcggaggagacgccgcggctccggctgtggaacgccaacccggacctggtcgtgcc 238 ||||||| ||||||||||||| | |||||||||||| | |||| ||||| || ||||| Sbjct: 36 gccggcgtgggagacgccgcgggtgcggctgtggaactcgaacctcgacctcgtggtgcc 95 Query: 239 gcggttccacaccccgagcgtctacttct 267 ||||||||||||||| ||||||||||||| Sbjct: 96 gcggttccacaccccaagcgtctacttct 124
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 139 bits (70), Expect = 8e-30 Identities = 111/125 (88%) Strand = Plus / Plus Query: 305 cttcgacgcggagcggatgcgccgggcgctggcggaggcgttggtgcccttctacccgat 364 |||||||| |||||||||||| || ||||||||||||||| | ||||| ||||||||||| Sbjct: 90227 cttcgacggggagcggatgcggcgcgcgctggcggaggcgctcgtgccgttctacccgat 90286 Query: 365 ggcggngcggctggcccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaagg 424 ||| | |||||| || ||||||||||||||| | || |||||||||||||||| |||||| Sbjct: 90287 ggccgggcggctcgcgcgcgacgaggacgggagggtcgagatcgactgcaacggggaagg 90346 Query: 425 ggtgc 429 ||||| Sbjct: 90347 ggtgc 90351 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 179 gccggcggaggagacgccgcggctccggctgtggaacgccaacccggacctggtcgtgcc 238 ||||||| ||||||||||||| | |||||||||||| | |||| ||||| || ||||| Sbjct: 90098 gccggcgtgggagacgccgcgggtgcggctgtggaactcgaacctcgacctcgtggtgcc 90157 Query: 239 gcggttccacaccccgagcgtctacttct 267 ||||||||||||||| ||||||||||||| Sbjct: 90158 gcggttccacaccccaagcgtctacttct 90186
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 139 bits (70), Expect = 8e-30 Identities = 111/125 (88%) Strand = Plus / Plus Query: 305 cttcgacgcggagcggatgcgccgggcgctggcggaggcgttggtgcccttctacccgat 364 |||||||| |||||||||||| || ||||||||||||||| | ||||| ||||||||||| Sbjct: 24969642 cttcgacggggagcggatgcggcgcgcgctggcggaggcgctcgtgccgttctacccgat 24969701 Query: 365 ggcggngcggctggcccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaagg 424 ||| | |||||| || ||||||||||||||| | || |||||||||||||||| |||||| Sbjct: 24969702 ggccgggcggctcgcgcgcgacgaggacgggagggtcgagatcgactgcaacggggaagg 24969761 Query: 425 ggtgc 429 ||||| Sbjct: 24969762 ggtgc 24969766 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 179 gccggcggaggagacgccgcggctccggctgtggaacgccaacccggacctggtcgtgcc 238 ||||||| ||||||||||||| | |||||||||||| | |||| ||||| || ||||| Sbjct: 24969513 gccggcgtgggagacgccgcgggtgcggctgtggaactcgaacctcgacctcgtggtgcc 24969572 Query: 239 gcggttccacaccccgagcgtctacttct 267 ||||||||||||||| ||||||||||||| Sbjct: 24969573 gcggttccacaccccaagcgtctacttct 24969601 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 271 ggcgcggcgcgggggaggaggaggcgg 297 ||||||||||||||| ||||||||||| Sbjct: 7969642 ggcgcggcgcgggggcggaggaggcgg 7969616 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 274 gcggcgcgggggaggaggaggcggaccg 301 ||||||| ||||||||||||| |||||| Sbjct: 23202745 gcggcgcaggggaggaggaggaggaccg 23202718 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ccgcggctccggctgtggaa 214 |||||||||||||||||||| Sbjct: 7101992 ccgcggctccggctgtggaa 7102011
>dbj|AK119237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D12, full insert sequence Length = 1827 Score = 139 bits (70), Expect = 8e-30 Identities = 111/125 (88%) Strand = Plus / Plus Query: 305 cttcgacgcggagcggatgcgccgggcgctggcggaggcgttggtgcccttctacccgat 364 |||||||| |||||||||||| || ||||||||||||||| | ||||| ||||||||||| Sbjct: 379 cttcgacggggagcggatgcggcgcgcgctggcggaggcgctcgtgccgttctacccgat 438 Query: 365 ggcggngcggctggcccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaagg 424 ||| | |||||| || ||||||||||||||| | || |||||||||||||||| |||||| Sbjct: 439 ggccgggcggctcgcgcgcgacgaggacgggagggtcgagatcgactgcaacggggaagg 498 Query: 425 ggtgc 429 ||||| Sbjct: 499 ggtgc 503 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 179 gccggcggaggagacgccgcggctccggctgtggaacgccaacccggacctggtcgtgcc 238 ||||||| ||||||||||||| | |||||||||||| | |||| ||||| || ||||| Sbjct: 250 gccggcgtgggagacgccgcgggtgcggctgtggaactcgaacctcgacctcgtggtgcc 309 Query: 239 gcggttccacaccccgagcgtctacttct 267 ||||||||||||||| ||||||||||||| Sbjct: 310 gcggttccacaccccaagcgtctacttct 338
>dbj|AK104637.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D12, full insert sequence Length = 1851 Score = 139 bits (70), Expect = 8e-30 Identities = 111/125 (88%) Strand = Plus / Plus Query: 305 cttcgacgcggagcggatgcgccgggcgctggcggaggcgttggtgcccttctacccgat 364 |||||||| |||||||||||| || ||||||||||||||| | ||||| ||||||||||| Sbjct: 285 cttcgacggggagcggatgcggcgcgcgctggcggaggcgctcgtgccgttctacccgat 344 Query: 365 ggcggngcggctggcccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaagg 424 ||| | |||||| || ||||||||||||||| | || |||||||||||||||| |||||| Sbjct: 345 ggccgggcggctcgcgcgcgacgaggacgggagggtcgagatcgactgcaacggggaagg 404 Query: 425 ggtgc 429 ||||| Sbjct: 405 ggtgc 409 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 179 gccggcggaggagacgccgcggctccggctgtggaacgccaacccggacctggtcgtgcc 238 ||||||| ||||||||||||| | |||||||||||| | |||| ||||| || ||||| Sbjct: 156 gccggcgtgggagacgccgcgggtgcggctgtggaactcgaacctcgacctcgtggtgcc 215 Query: 239 gcggttccacaccccgagcgtctacttct 267 ||||||||||||||| ||||||||||||| Sbjct: 216 gcggttccacaccccaagcgtctacttct 244
>dbj|AK072528.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131B01, full insert sequence Length = 1881 Score = 139 bits (70), Expect = 8e-30 Identities = 111/125 (88%) Strand = Plus / Plus Query: 305 cttcgacgcggagcggatgcgccgggcgctggcggaggcgttggtgcccttctacccgat 364 |||||||| |||||||||||| || ||||||||||||||| | ||||| ||||||||||| Sbjct: 286 cttcgacggggagcggatgcggcgcgcgctggcggaggcgctcgtgccgttctacccgat 345 Query: 365 ggcggngcggctggcccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaagg 424 ||| | |||||| || ||||||||||||||| | || |||||||||||||||| |||||| Sbjct: 346 ggccgggcggctcgcgcgcgacgaggacgggagggtcgagatcgactgcaacggggaagg 405 Query: 425 ggtgc 429 ||||| Sbjct: 406 ggtgc 410 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 179 gccggcggaggagacgccgcggctccggctgtggaacgccaacccggacctggtcgtgcc 238 ||||||| ||||||||||||| | |||||||||||| | |||| ||||| || ||||| Sbjct: 157 gccggcgtgggagacgccgcgggtgcggctgtggaactcgaacctcgacctcgtggtgcc 216 Query: 239 gcggttccacaccccgagcgtctacttct 267 ||||||||||||||| ||||||||||||| Sbjct: 217 gcggttccacaccccaagcgtctacttct 245
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 131 bits (66), Expect = 2e-27 Identities = 110/125 (88%) Strand = Plus / Plus Query: 305 cttcgacgcggagcggatgcgccgggcgctggcggaggcgttggtgcccttctacccgat 364 |||||||| |||||||||||| || ||||||||||| ||| | ||||| ||||||||||| Sbjct: 97677 cttcgacggggagcggatgcggcgcgcgctggcggaagcgctcgtgccgttctacccgat 97736 Query: 365 ggcggngcggctggcccgcgacgaggacgggcgcgtggagatcgactgcaacgcggaagg 424 ||| | |||||| || ||||||||||||||| | || |||||||||||||||| |||||| Sbjct: 97737 ggccgggcggctcgcgcgcgacgaggacgggagggtcgagatcgactgcaacggggaagg 97796 Query: 425 ggtgc 429 ||||| Sbjct: 97797 ggtgc 97801 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 179 gccggcggaggagacgccgcggctccggctgtggaacgccaacccggacctggtcgtgcc 238 ||||||| ||||||||||||| | |||||||||||| | |||| ||||| || ||||| Sbjct: 97548 gccggcgtgggagacgccgcgggtgcggctgtggaactcgaacctcgacctcgtggtgcc 97607 Query: 239 gcggttccacaccccgagcgtctacttct 267 ||||||||||||||| ||||||||||||| Sbjct: 97608 gcggttccacaccccaagcgtctacttct 97636
>gb|AY109546.1| Zea mays CL531_1 mRNA sequence Length = 1701 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 225 gacctggtcgtgccgcggttccacaccccgagcgtctacttcttccggcgcg 276 |||||||| ||||||||||||||||| || ||||||||||||||||| |||| Sbjct: 217 gacctggtggtgccgcggttccacacgcccagcgtctacttcttccgccgcg 268 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 386 cgaggacgggcgcgtggagatcgactgcaacgcggaaggggtgc 429 ||||||||| ||||| ||||||||||||||||||| ||||||| Sbjct: 393 cgaggacggccgcgtcgagatcgactgcaacgcgggcggggtgc 436
>dbj|AB218791.1| Prunus mume Pm94 mRNA for Alcohol acyl-transferase, complete cds Length = 1695 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 381 cgcgacgaggacgggcgcgtggagatcgactgcaacgcggaaggggtgc 429 |||||||| ||||| || | |||||||||||||||| ||||||||||| Sbjct: 402 cgcgacgacgacggccgtatcgagatcgactgcaacggggaaggggtgc 450
>ref|NM_194749.1| Oryza sativa (japonica cultivar-group) putative hsr201 hypersensitivity-related protein (OSJNBa0013J21.8), mRNA Length = 522 Score = 46.1 bits (23), Expect = 0.093 Identities = 35/39 (89%) Strand = Plus / Plus Query: 329 ggcgctggcggaggcgttggtgcccttctacccgatggc 367 |||||||||||||||| ||||| |||||||||| |||| Sbjct: 222 ggcgctggcggaggcgctggtgagcttctacccgctggc 260
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 46.1 bits (23), Expect = 0.093 Identities = 35/39 (89%) Strand = Plus / Plus Query: 329 ggcgctggcggaggcgttggtgcccttctacccgatggc 367 |||||||||||||||| ||||| |||||||||| |||| Sbjct: 44841 ggcgctggcggaggcgctggtgagcttctacccgctggc 44879 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 gcgctggcggaggcgttggtgcccttctaccc 361 ||||||||||||||| ||||| ||||||||| Sbjct: 31619 gcgctggcggaggcgctggtgagcttctaccc 31650
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 46.1 bits (23), Expect = 0.093 Identities = 35/39 (89%) Strand = Plus / Plus Query: 329 ggcgctggcggaggcgttggtgcccttctacccgatggc 367 |||||||||||||||| ||||| |||||||||| |||| Sbjct: 2066701 ggcgctggcggaggcgctggtgagcttctacccgctggc 2066739 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 gcgctggcggaggcgttggtgcccttctaccc 361 ||||||||||||||| ||||| ||||||||| Sbjct: 2053479 gcgctggcggaggcgctggtgagcttctaccc 2053510
>emb|AL606601.3|OSJN00029 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055H05, complete sequence Length = 152329 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 271 ggcgcggcgcgggggaggaggaggcgg 297 ||||||||||||||| ||||||||||| Sbjct: 31766 ggcgcggcgcgggggcggaggaggcgg 31740
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.093 Identities = 35/39 (89%) Strand = Plus / Plus Query: 329 ggcgctggcggaggcgttggtgcccttctacccgatggc 367 |||||||||||||||| ||||| |||||||||| |||| Sbjct: 2066701 ggcgctggcggaggcgctggtgagcttctacccgctggc 2066739 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 gcgctggcggaggcgttggtgcccttctaccc 361 ||||||||||||||| ||||| ||||||||| Sbjct: 2053479 gcgctggcggaggcgctggtgagcttctaccc 2053510
>dbj|AK066866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088O08, full insert sequence Length = 1766 Score = 46.1 bits (23), Expect = 0.093 Identities = 35/39 (89%) Strand = Plus / Plus Query: 329 ggcgctggcggaggcgttggtgcccttctacccgatggc 367 |||||||||||||||| ||||| |||||||||| |||| Sbjct: 270 ggcgctggcggaggcgctggtgagcttctacccgctggc 308
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.093 Identities = 35/39 (89%) Strand = Plus / Plus Query: 329 ggcgctggcggaggcgttggtgcccttctacccgatggc 367 |||||||||||||||| ||||| |||||||||| |||| Sbjct: 2066652 ggcgctggcggaggcgctggtgagcttctacccgctggc 2066690 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 gcgctggcggaggcgttggtgcccttctaccc 361 ||||||||||||||| ||||| ||||||||| Sbjct: 2053430 gcgctggcggaggcgctggtgagcttctaccc 2053461
>gb|AC126391.9| Homo sapiens chromosome 17, clone RP11-106A7, complete sequence Length = 56981 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 274 gcggcgcgggggaggaggaggcggac 299 ||||||||| |||||||||||||||| Sbjct: 47418 gcggcgcggaggaggaggaggcggac 47443
>gb|BC011467.1| Mus musculus cDNA sequence BC011467, mRNA (cDNA clone IMAGE:3154539), partial cds Length = 3273 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 274 gcggcgcgggggaggaggaggcggac 299 ||||||||| |||||||||||||||| Sbjct: 160 gcggcgcggaggaggaggaggcggac 185
>gb|BC041772.1| Homo sapiens hypothetical protein LOC124976, mRNA (cDNA clone MGC:27061 IMAGE:4814561), complete cds Length = 3457 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 274 gcggcgcgggggaggaggaggcggac 299 ||||||||| |||||||||||||||| Sbjct: 245 gcggcgcggaggaggaggaggcggac 270
>emb|AL662812.12| Mouse DNA sequence from clone RP23-48A2 on chromosome 11 Contains the gene for a novel protein similar to smoothelin Smtn, three novel genes, the Mybbp1a gene for MYB binding protein (P160) 1a, a ribosomal protein 7a (Rpl7a) pseudogene, the 5' end of the Ube2g1 gene for ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) and four CpG islands, complete sequence Length = 258521 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 274 gcggcgcgggggaggaggaggcggac 299 ||||||||| |||||||||||||||| Sbjct: 107452 gcggcgcggaggaggaggaggcggac 107427
>gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence Length = 185378 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 274 gcggcgcgggggaggaggaggcggac 299 ||||||||| |||||||||||||||| Sbjct: 162060 gcggcgcggaggaggaggaggcggac 162035
>emb|AJ439695.1|MLU439695 Micrococcus luteus cryptic MLU1 plasmid Length = 2331 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 ggatgcgccgggcgctggcggaggcg 344 ||||||| |||||||||||||||||| Sbjct: 2223 ggatgcgtcgggcgctggcggaggcg 2198
>ref|XM_468518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 711 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 gcggcgcgggggaggaggagg 294 ||||||||||||||||||||| Sbjct: 377 gcggcgcgggggaggaggagg 357
>ref|NM_190278.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2883 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 gcgcgggggaggaggaggcgg 297 ||||||||||||||||||||| Sbjct: 450 gcgcgggggaggaggaggcgg 470
>ref|XM_429811.1| PREDICTED: Gallus gallus LOC421101 (LOC421101), mRNA Length = 1846 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 ggatgcgccgggcgctggcgg 339 ||||||||||||||||||||| Sbjct: 1038 ggatgcgccgggcgctggcgg 1058
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 gcggcgcgggggaggaggaggcgga 298 ||||||||||||||| ||||||||| Sbjct: 86440 gcggcgcgggggaggcggaggcgga 86416
>ref|XM_541407.2| PREDICTED: Canis familiaris similar to Flt3 interacting zinc finger protein 1 (LOC484292), mRNA Length = 4233 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 ggcggaggagacgccgcggctccgg 206 ||||||||||||||||| ||||||| Sbjct: 2583 ggcggaggagacgccgccgctccgg 2607
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 cgctggcggaggcgttggtgc 351 ||||||||||||||||||||| Sbjct: 3627574 cgctggcggaggcgttggtgc 3627554
>gb|AC149395.2| Phakopsora pachyrhizi clone JGIAFNA-61H11, complete sequence Length = 30962 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 gcggcgcgggggaggaggagg 294 ||||||||||||||||||||| Sbjct: 20535 gcggcgcgggggaggaggagg 20515
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 gcggcgcgggggaggaggaggcgga 298 ||||||||||||||| ||||||||| Sbjct: 21629814 gcggcgcgggggaggcggaggcgga 21629790
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gcgcgggggaggaggaggcgg 297 ||||||||||||||||||||| Sbjct: 39010605 gcgcgggggaggaggaggcgg 39010585 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gcggcgcgggggaggaggag 293 |||||||||||||||||||| Sbjct: 29488926 gcggcgcgggggaggaggag 29488945
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gcgcgggggaggaggaggcgg 297 ||||||||||||||||||||| Sbjct: 84238 gcgcgggggaggaggaggcgg 84218
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gcgcgggggaggaggaggcgg 297 ||||||||||||||||||||| Sbjct: 28585 gcgcgggggaggaggaggcgg 28565
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 gcggcgcgggggaggaggagg 294 ||||||||||||||||||||| Sbjct: 145107 gcggcgcgggggaggaggagg 145127
>dbj|AK068240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149L15, full insert sequence Length = 1606 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 gcggcgcgggggaggaggaggcgga 298 ||||||||||||||| ||||||||| Sbjct: 187 gcggcgcgggggaggcggaggcgga 163
>emb|Z77660.1|CEF38H4 Caenorhabditis elegans Cosmid F38H4, complete sequence Length = 27809 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttctcccacgcgcgttccacg 81 ||||||||||||||||||||| Sbjct: 10967 ttctcccacgcgcgttccacg 10987
>ref|XM_483547.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2097 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 tgcgccgggcgctggcggag 341 |||||||||||||||||||| Sbjct: 35 tgcgccgggcgctggcggag 54
>ref|XM_468745.1| Oryza sativa (japonica cultivar-group), mRNA Length = 366 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ccgcggctccggctgtggaa 214 |||||||||||||||||||| Sbjct: 279 ccgcggctccggctgtggaa 298
>ref|XM_472784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1428 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 274 gcggcgcgggggaggaggaggcggaccg 301 ||||||| ||||||||||||| |||||| Sbjct: 143 gcggcgcaggggaggaggaggaggaccg 170
>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19 map E30331S, complete sequence Length = 164820 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ccgcggctccggctgtggaa 214 |||||||||||||||||||| Sbjct: 76915 ccgcggctccggctgtggaa 76934
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggaccgctacttcgacgcg 314 |||||||||||||||||||| Sbjct: 90604 cggaccgctacttcgacgcg 90585
>ref|XM_363163.1| Magnaporthe grisea 70-15 hypothetical protein (MG08747.4) partial cds Length = 672 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 cgcgggggaggaggaggcgg 297 |||||||||||||||||||| Sbjct: 115 cgcgggggaggaggaggcgg 96
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ccgcggctccggctgtggaa 214 |||||||||||||||||||| Sbjct: 17486828 ccgcggctccggctgtggaa 17486809
>ref|XM_743795.1| Aspergillus fumigatus Af293 kumamolisin precursor (Afu7g06220) partial mRNA Length = 1887 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gggggaggaggaggcggacc 300 |||||||||||||||||||| Sbjct: 1799 gggggaggaggaggcggacc 1780
>emb|AL137002.19| Human DNA sequence from clone RP11-98F14 on chromosome 13q22.1-31.1 Contains the 3' end of the MCF2L gene for MCF.2 cell line derived transforming sequence-like, the F7 gene for coagulation factor VII (serum prothrombin conversion accelerator), the F10 gene for coagulation factor X, a lysyl-tRNA synthetase (KARS) pseudogene, the PROZ gene for protein Z, vitamin K-dependent plasma glycoprotein (PZ), the 3' end of a novel gene (FLJ11305) and six CpG islands, complete sequence Length = 132933 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 ggcgcggcgcgggggaggaggagg 294 |||| ||||||||||||||||||| Sbjct: 79029 ggcggggcgcgggggaggaggagg 79052
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 gcgctggcggaggcgttggtgcccttctaccc 361 ||||||||||||||| ||||| ||||||||| Sbjct: 144208 gcgctggcggaggcgctggtgagcttctaccc 144239
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 cgccaacccggacctggtcg 234 |||||||||||||||||||| Sbjct: 46188 cgccaacccggacctggtcg 46207
>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14, complete sequence Length = 139418 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 274 gcggcgcgggggaggaggaggcggaccg 301 ||||||| ||||||||||||| |||||| Sbjct: 92937 gcggcgcaggggaggaggaggaggaccg 92910
>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21, complete sequence Length = 166475 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ccgcggctccggctgtggaa 214 |||||||||||||||||||| Sbjct: 123183 ccgcggctccggctgtggaa 123202
>gb|AF293355.2| Streptomyces collinus DSM2012 rubrinomycin gene cluster, complete sequence Length = 32634 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 cggcgcgggggaggaggaggcggaccgc 302 ||||||||||||||| ||||||| |||| Sbjct: 16241 cggcgcgggggaggaagaggcggcccgc 16268
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 ctgtggaacgccaacccggacctg 230 |||||||||||| ||||||||||| Sbjct: 3839168 ctgtggaacgccgacccggacctg 3839191
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gccgggcgctggcggaggcg 344 |||||||||||||||||||| Sbjct: 3149765 gccgggcgctggcggaggcg 3149746
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 ctggcccgcgacgaggacgg 394 |||||||||||||||||||| Sbjct: 26395 ctggcccgcgacgaggacgg 26414
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 tgcgccgggcgctggcggag 341 |||||||||||||||||||| Sbjct: 26893255 tgcgccgggcgctggcggag 26893274
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ccgcggctccggctgtggaa 214 |||||||||||||||||||| Sbjct: 17480369 ccgcggctccggctgtggaa 17480350
>gb|AE004851.1| Pseudomonas aeruginosa PAO1, section 412 of 529 of the complete genome Length = 13101 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 cgccaacccggacctggtcg 234 |||||||||||||||||||| Sbjct: 10000 cgccaacccggacctggtcg 10019
>gb|AC087591.2| Homo sapiens chromosome 3 clone RP11-95M5 map 3p, complete sequence Length = 161014 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ggcgcggcgcgggggaggaggagg 294 ||||||| |||||||||||||||| Sbjct: 91759 ggcgcggggcgggggaggaggagg 91736
>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08 Length = 156850 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gcggcgcgggggaggaggag 293 |||||||||||||||||||| Sbjct: 55200 gcggcgcgggggaggaggag 55219
>gb|AC174932.1| Ornithorhynchus anatinus BAC clone OABb-260D21 from chromosome unknown, complete sequence Length = 137944 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ctttaattttaatcatcgcc 52 |||||||||||||||||||| Sbjct: 4312 ctttaattttaatcatcgcc 4293
>dbj|AK119836.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-B03, full insert sequence Length = 2495 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 tgcgccgggcgctggcggag 341 |||||||||||||||||||| Sbjct: 120 tgcgccgggcgctggcggag 139
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 tgcgccgggcgctggcggag 341 |||||||||||||||||||| Sbjct: 156045 tgcgccgggcgctggcggag 156064
>dbj|AK098907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F05, full insert sequence Length = 3209 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ccgcggctccggctgtggaa 214 |||||||||||||||||||| Sbjct: 279 ccgcggctccggctgtggaa 260
>dbj|AK067629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111L12, full insert sequence Length = 3301 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ccgcggctccggctgtggaa 214 |||||||||||||||||||| Sbjct: 358 ccgcggctccggctgtggaa 339
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gccgggcgctggcggaggcg 344 |||||||||||||||||||| Sbjct: 5040310 gccgggcgctggcggaggcg 5040329
>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02, complete sequence Length = 121337 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 274 gcggcgcgggggaggaggaggcggaccg 301 ||||||| ||||||||||||| |||||| Sbjct: 40898 gcggcgcaggggaggaggaggaggaccg 40871
>gb|L24487.1|SH1DNAPOLA Pseudorabies virus DNA polymerase gene, partial cds Length = 3144 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 ctggcccgcgacgaggacgg 394 |||||||||||||||||||| Sbjct: 790 ctggcccgcgacgaggacgg 809 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,144,458 Number of Sequences: 3902068 Number of extensions: 3144458 Number of successful extensions: 74670 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73570 Number of HSP's gapped (non-prelim): 1098 length of query: 429 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 407 effective length of database: 17,147,199,772 effective search space: 6978910307204 effective search space used: 6978910307204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
