ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast57e10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 186 bits (94), Expect = 4e-44 Identities = 127/138 (92%) Strand = Plus / Minus Query: 269 ggccatggggcacggggtgagctgcgcgcgcaccggcgacgagcacgacttcttccgcgc 328 ||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||| || Sbjct: 129277 ggccatgggtcacggtgtcagctgcgcccgcaccggcgacgagcacgacttcttccgggc 129218 Query: 329 ggcgcagctcggggacctcgacgccctgggcgcgctcctcgccgccgacgcctccctcgc 388 |||||||||||| |||||||||||||||| ||| ||||||||||||||| | |||||||| Sbjct: 129217 ggcgcagctcggcgacctcgacgccctggccgccctcctcgccgccgacccttccctcgc 129158 Query: 389 ccgccgcgccaccctcta 406 ||||||||||||||||| Sbjct: 129157 tcgccgcgccaccctcta 129140
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 186 bits (94), Expect = 4e-44 Identities = 127/138 (92%) Strand = Plus / Minus Query: 269 ggccatggggcacggggtgagctgcgcgcgcaccggcgacgagcacgacttcttccgcgc 328 ||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||| || Sbjct: 611878 ggccatgggtcacggtgtcagctgcgcccgcaccggcgacgagcacgacttcttccgggc 611819 Query: 329 ggcgcagctcggggacctcgacgccctgggcgcgctcctcgccgccgacgcctccctcgc 388 |||||||||||| |||||||||||||||| ||| ||||||||||||||| | |||||||| Sbjct: 611818 ggcgcagctcggcgacctcgacgccctggccgccctcctcgccgccgacccttccctcgc 611759 Query: 389 ccgccgcgccaccctcta 406 ||||||||||||||||| Sbjct: 611758 tcgccgcgccaccctcta 611741 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 ||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 27343126 acgcagctgcgtggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 27343067 Query: 61 tgtgcacactgcaattagcagcatacgctaattttt 96 ||||| | | || ||||||||||||||| ||||| Sbjct: 27343066 tgtgcgctccacatatagcagcatacgctatttttt 27343031 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccaccttcacc 229 |||||||||||||||||||||||||| Sbjct: 6849082 ccgccgccgccgcctccaccttcacc 6849107 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 200 tcccccgccgccgccgcctccacc 223 |||||||||||||||||||||||| Sbjct: 20923661 tcccccgccgccgccgcctccacc 20923638 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 195 gagcctcccccgccgccgccgcc 217 ||||||||||||||||||||||| Sbjct: 26178075 gagcctcccccgccgccgccgcc 26178053 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctccacc 223 ||||||||||||||||||||||| Sbjct: 2750266 cccccgccgccgccgcctccacc 2750288 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccaccttcaccgccg 233 ||||||||||||||||| ||||||| |||| Sbjct: 15553264 ccgccgccgccgcctcccccttcacggccg 15553235 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 tcccccgccgccgccgcctcc 220 ||||||||||||||||||||| Sbjct: 21362989 tcccccgccgccgccgcctcc 21362969 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctcc 220 ||||||||||||||||||||| Sbjct: 19181460 tcccccgccgccgccgcctcc 19181480 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 24629597 cctcccccgccgccgccgcc 24629578 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 22155334 cctcccccgccgccgccgcc 22155353 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 20052880 ccgccgccgccgcctccacc 20052899 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 20011458 cctcccccgccgccgccgcc 20011477 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 19034919 ccgccgccgccgcctccacc 19034938 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgc 216 |||||||||||||||||||| Sbjct: 17378628 gcctcccccgccgccgccgc 17378647 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctcc 220 |||||||||||||||||||| Sbjct: 3641805 cccccgccgccgccgcctcc 3641824 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 3466508 cctcccccgccgccgccgcc 3466489 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 2678022 cctcccccgccgccgccgcc 2678003 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 2498659 ccgccgccgccgcctccacc 2498678
>dbj|AK107650.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-F11, full insert sequence Length = 2766 Score = 186 bits (94), Expect = 4e-44 Identities = 127/138 (92%) Strand = Plus / Plus Query: 269 ggccatggggcacggggtgagctgcgcgcgcaccggcgacgagcacgacttcttccgcgc 328 ||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||| || Sbjct: 78 ggccatgggtcacggtgtcagctgcgcccgcaccggcgacgagcacgacttcttccgggc 137 Query: 329 ggcgcagctcggggacctcgacgccctgggcgcgctcctcgccgccgacgcctccctcgc 388 |||||||||||| |||||||||||||||| ||| ||||||||||||||| | |||||||| Sbjct: 138 ggcgcagctcggcgacctcgacgccctggccgccctcctcgccgccgacccttccctcgc 197 Query: 389 ccgccgcgccaccctcta 406 ||||||||||||||||| Sbjct: 198 tcgccgcgccaccctcta 215
>dbj|AK105623.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C08, full insert sequence Length = 2187 Score = 186 bits (94), Expect = 4e-44 Identities = 127/138 (92%) Strand = Plus / Plus Query: 269 ggccatggggcacggggtgagctgcgcgcgcaccggcgacgagcacgacttcttccgcgc 328 ||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||| || Sbjct: 75 ggccatgggtcacggtgtcagctgcgcccgcaccggcgacgagcacgacttcttccgggc 134 Query: 329 ggcgcagctcggggacctcgacgccctgggcgcgctcctcgccgccgacgcctccctcgc 388 |||||||||||| |||||||||||||||| ||| ||||||||||||||| | |||||||| Sbjct: 135 ggcgcagctcggcgacctcgacgccctggccgccctcctcgccgccgacccttccctcgc 194 Query: 389 ccgccgcgccaccctcta 406 ||||||||||||||||| Sbjct: 195 tcgccgcgccaccctcta 212
>dbj|AK102800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108E06, full insert sequence Length = 2017 Score = 186 bits (94), Expect = 4e-44 Identities = 127/138 (92%) Strand = Plus / Plus Query: 269 ggccatggggcacggggtgagctgcgcgcgcaccggcgacgagcacgacttcttccgcgc 328 ||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||| || Sbjct: 100 ggccatgggtcacggtgtcagctgcgcccgcaccggcgacgagcacgacttcttccgggc 159 Query: 329 ggcgcagctcggggacctcgacgccctgggcgcgctcctcgccgccgacgcctccctcgc 388 |||||||||||| |||||||||||||||| ||| ||||||||||||||| | |||||||| Sbjct: 160 ggcgcagctcggcgacctcgacgccctggccgccctcctcgccgccgacccttccctcgc 219 Query: 389 ccgccgcgccaccctcta 406 ||||||||||||||||| Sbjct: 220 tcgccgcgccaccctcta 237
>gb|AF272860.1| Oryza sativa receptor-like kinase Xa21-binding protein 3 (Xb3) mRNA, complete cds Length = 1353 Score = 178 bits (90), Expect = 9e-42 Identities = 123/134 (91%) Strand = Plus / Plus Query: 273 atggggcacggggtgagctgcgcgcgcaccggcgacgagcacgacttcttccgcgcggcg 332 ||||| ||||| || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1 atgggtcacggtgtcagctgcgcccgcaccggcgacgagcacgacttcttccgggcggcg 60 Query: 333 cagctcggggacctcgacgccctgggcgcgctcctcgccgccgacgcctccctcgcccgc 392 |||||||| |||||||||||||||| ||| ||||||||||||||| | |||||||| ||| Sbjct: 61 cagctcggcgacctcgacgccctggccgccctcctcgccgccgacccttccctcgctcgc 120 Query: 393 cgcgccaccctcta 406 |||||||||||||| Sbjct: 121 cgcgccaccctcta 134
>dbj|AK105930.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B01, full insert sequence Length = 1781 Score = 174 bits (88), Expect = 1e-40 Identities = 118/128 (92%) Strand = Plus / Plus Query: 279 cacggggtgagctgcgcgcgcaccggcgacgagcacgacttcttccgcgcggcgcagctc 338 ||||| || |||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5 cacggtgtcagctgcgcccgcaccggcgacgagcacgacttcttccgggcggcgcagctc 64 Query: 339 ggggacctcgacgccctgggcgcgctcctcgccgccgacgcctccctcgcccgccgcgcc 398 || |||||||||||||||| ||| ||||||||||||||| | |||||||| ||||||||| Sbjct: 65 ggcgacctcgacgccctggccgccctcctcgccgccgacccttccctcgctcgccgcgcc 124 Query: 399 accctcta 406 |||||||| Sbjct: 125 accctcta 132
>emb|Z14994.1|ZMNRNA512 Z.mays mRNA for U5snRNA (U512) Length = 1749 Score = 155 bits (78), Expect = 1e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1539 acgcagctgcgcagtgggcacaaagcgaactattctttcgccttttactaaagaataccg 1598 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggggtctctct 110 ||||| | |||||||||||||||||||| ||||||| |||| ||||||| Sbjct: 1599 tgtgcccgctgcaattagcagcatacgcatatttttggagggttctctct 1648 Score = 147 bits (74), Expect = 3e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 377 acgcagctgcgcagtgggcacaaagcgaactattctttcgccttttactaaagaataccg 436 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggg 102 ||||| | ||||||| ||||||||||||| ||||||| |||| Sbjct: 437 tgtgcccgctgcaataagcagcatacgcttatttttggaggg 478
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 147 bits (74), Expect = 3e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14576708 acgcagctgcgcggtgagcacagagcgaactattctttcgccttttactaaagaataccg 14576767 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggg 102 ||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 14576768 tgtgcgcgccgcaattagcagcatacgctaatttttggaggg 14576809 Score = 139 bits (70), Expect = 8e-30 Identities = 94/102 (92%) Strand = Plus / Minus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 21977790 acgcagctgcgcggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 21977731 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggg 102 ||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 21977730 tgtgcgcgccgcaattagcagcatacgctaatttttggaggg 21977689 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5796525 cacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 5796479 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctccac 222 ||||||||||||||||||||||| Sbjct: 32617131 tcccccgccgccgccgcctccac 32617153 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 205 cgccgccgccgcctccaccttcaccgccgc 234 |||||||||||||||| ||||||| ||||| Sbjct: 21815294 cgccgccgccgcctcccccttcacggccgc 21815323 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 363 ctcctcgccgccgacgcctccctcgc 388 ||||||||||||| |||||||||||| Sbjct: 4856829 ctcctcgccgccgccgcctccctcgc 4856854 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 206 gccgccgccgcctccaccttcaccgccgc 234 ||||| ||| ||||||||||||||||||| Sbjct: 28544372 gccgcggccacctccaccttcaccgccgc 28544400 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 gccggagcctcccccgccgccgccg 215 |||||||||||| |||||||||||| Sbjct: 24686263 gccggagcctccgccgccgccgccg 24686287 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcc 217 ||||||||||||||||||||| Sbjct: 20377203 gcctcccccgccgccgccgcc 20377223 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcc 217 ||||||||||||||||||||| Sbjct: 5833585 gcctcccccgccgccgccgcc 5833565 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccaccttc 226 ||||| |||||||||||||| |||||||| Sbjct: 4754462 cctccgccgccgccgccgccaccaccttc 4754490 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||||| ||| ||| | ||||||| Sbjct: 198703 cctcccccgccgccgccgcttcctcctcctccgccgc 198667 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 33240691 cctcccccgccgccgccgcc 33240672 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctcc 220 |||||| ||||||||||||||||| Sbjct: 32648039 gcctccgccgccgccgccgcctcc 32648016 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctcc 220 |||||||||||||||||||| Sbjct: 29223908 cccccgccgccgccgcctcc 29223927 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 28294057 cctcccccgccgccgccgcc 28294038 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctcc 220 |||||||||||||||||||| Sbjct: 22554737 cccccgccgccgccgcctcc 22554756 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 tcccccgccgccgccgcctc 219 |||||||||||||||||||| Sbjct: 17148319 tcccccgccgccgccgcctc 17148300 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctcca 221 ||||| |||||||||||||||||| Sbjct: 13933114 cctcctccgccgccgccgcctcca 13933091 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 7020376 cctcccccgccgccgccgcc 7020395 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 3548550 cctcccccgccgccgccgcc 3548531 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 3092626 cctcccccgccgccgccgcc 3092645
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 147 bits (74), Expect = 3e-32 Identities = 95/102 (93%) Strand = Plus / Minus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81003 acgcagctgcgcggtgagcacagagcgaactattctttcgccttttactaaagaataccg 80944 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggg 102 ||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 80943 tgtgcgcgccgcaattagcagcatacgctaatttttggaggg 80902
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24, complete sequence Length = 146168 Score = 147 bits (74), Expect = 3e-32 Identities = 89/94 (94%) Strand = Plus / Minus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 46911 gcagctgcgcagtgggcacaaagcgaactattctttcgccttttactaaagaataccgtg 46852 Query: 63 tgcacactgcaattagcagcatacgctaattttt 96 ||||| |||||| ||||||||||| ||||||||| Sbjct: 46851 tgcacgctgcaaatagcagcatactctaattttt 46818 Score = 147 bits (74), Expect = 3e-32 Identities = 89/94 (94%) Strand = Plus / Minus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41944 gcagctgcgcagtgggcacagagcgaactattctttcgccttttactaaagaataccgtg 41885 Query: 63 tgcacactgcaattagcagcatacgctaattttt 96 ||| | |||||| ||||||||||| ||||||||| Sbjct: 41884 tgctcgctgcaaatagcagcatactctaattttt 41851 Score = 139 bits (70), Expect = 8e-30 Identities = 88/94 (93%) Strand = Plus / Minus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 48020 gcagctgcgcagtgggcacaaagcgaactattctttcgccttttactaaagaataccgtg 47961 Query: 63 tgcacactgcaattagcagcatacgctaattttt 96 ||| | |||||| ||||||||||| ||||||||| Sbjct: 47960 tgctcgctgcaaatagcagcatactctaattttt 47927 Score = 139 bits (70), Expect = 8e-30 Identities = 88/94 (93%) Strand = Plus / Minus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 45591 gcagctgcgcagtgggcacaaagcgaactattctttcgccttttactaaagaataccgtg 45532 Query: 63 tgcacactgcaattagcagcatacgctaattttt 96 ||| | |||||||||||||||||| | ||||||| Sbjct: 45531 tgctcgctgcaattagcagcatactcaaattttt 45498
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 147 bits (74), Expect = 3e-32 Identities = 89/94 (94%) Strand = Plus / Minus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 33996015 gcagctgcgcagtgggcacaaagcgaactattctttcgccttttactaaagaataccgtg 33995956 Query: 63 tgcacactgcaattagcagcatacgctaattttt 96 ||||| |||||| ||||||||||| ||||||||| Sbjct: 33995955 tgcacgctgcaaatagcagcatactctaattttt 33995922 Score = 147 bits (74), Expect = 3e-32 Identities = 89/94 (94%) Strand = Plus / Minus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33991048 gcagctgcgcagtgggcacagagcgaactattctttcgccttttactaaagaataccgtg 33990989 Query: 63 tgcacactgcaattagcagcatacgctaattttt 96 ||| | |||||| ||||||||||| ||||||||| Sbjct: 33990988 tgctcgctgcaaatagcagcatactctaattttt 33990955 Score = 139 bits (70), Expect = 8e-30 Identities = 88/94 (93%) Strand = Plus / Minus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 33997124 gcagctgcgcagtgggcacaaagcgaactattctttcgccttttactaaagaataccgtg 33997065 Query: 63 tgcacactgcaattagcagcatacgctaattttt 96 ||| | |||||| ||||||||||| ||||||||| Sbjct: 33997064 tgctcgctgcaaatagcagcatactctaattttt 33997031 Score = 139 bits (70), Expect = 8e-30 Identities = 88/94 (93%) Strand = Plus / Minus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 33994695 gcagctgcgcagtgggcacaaagcgaactattctttcgccttttactaaagaataccgtg 33994636 Query: 63 tgcacactgcaattagcagcatacgctaattttt 96 ||| | |||||||||||||||||| | ||||||| Sbjct: 33994635 tgctcgctgcaattagcagcatactcaaattttt 33994602 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 207 ccgccgccgcctccaccttcaccgcc 232 ||||||||||| |||||||||||||| Sbjct: 987112 ccgccgccgccgccaccttcaccgcc 987137 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccaccttc 226 ||||| ||||||||||||||||| ||||| Sbjct: 24364538 cctcctccgccgccgccgcctccgccttc 24364566 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgc 216 |||||||||||||||||||| Sbjct: 34310159 gcctcccccgccgccgccgc 34310178 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cccccgccgccgccgcctcc 220 |||||||||||||||||||| Sbjct: 27441885 cccccgccgccgccgcctcc 27441866 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 24556971 cctcccccgccgccgccgcc 24556952 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 23336963 cctcccccgccgccgccgcc 23336982 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 22119522 cctcccccgccgccgccgcc 22119503 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ctcccccgccgccgccgcct 218 |||||||||||||||||||| Sbjct: 833640 ctcccccgccgccgccgcct 833659
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 147 bits (74), Expect = 3e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14571683 acgcagctgcgcggtgagcacagagcgaactattctttcgccttttactaaagaataccg 14571742 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggg 102 ||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 14571743 tgtgcgcgccgcaattagcagcatacgctaatttttggaggg 14571784 Score = 139 bits (70), Expect = 8e-30 Identities = 94/102 (92%) Strand = Plus / Minus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 21970819 acgcagctgcgcggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 21970760 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggg 102 ||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 21970759 tgtgcgcgccgcaattagcagcatacgctaatttttggaggg 21970718 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5795738 cacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 5795692 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctccac 222 ||||||||||||||||||||||| Sbjct: 32707641 tcccccgccgccgccgcctccac 32707663 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 205 cgccgccgccgcctccaccttcaccgccgc 234 |||||||||||||||| ||||||| ||||| Sbjct: 21808323 cgccgccgccgcctcccccttcacggccgc 21808352 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 363 ctcctcgccgccgacgcctccctcgc 388 ||||||||||||| |||||||||||| Sbjct: 4856044 ctcctcgccgccgccgcctccctcgc 4856069 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 206 gccgccgccgcctccaccttcaccgccgc 234 ||||| ||| ||||||||||||||||||| Sbjct: 28635696 gccgcggccacctccaccttcaccgccgc 28635724 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 gccggagcctcccccgccgccgccg 215 |||||||||||| |||||||||||| Sbjct: 24603093 gccggagcctccgccgccgccgccg 24603117 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcc 217 ||||||||||||||||||||| Sbjct: 20370232 gcctcccccgccgccgccgcc 20370252 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcc 217 ||||||||||||||||||||| Sbjct: 5832798 gcctcccccgccgccgccgcc 5832778 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccaccttc 226 ||||| |||||||||||||| |||||||| Sbjct: 4754577 cctccgccgccgccgccgccaccaccttc 4754605 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||||| ||| ||| | ||||||| Sbjct: 198703 cctcccccgccgccgccgcttcctcctcctccgccgc 198667 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 33331201 cctcccccgccgccgccgcc 33331182 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctcc 220 |||||| ||||||||||||||||| Sbjct: 32738549 gcctccgccgccgccgccgcctcc 32738526 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctcc 220 |||||||||||||||||||| Sbjct: 29315284 cccccgccgccgccgcctcc 29315303 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 28385381 cctcccccgccgccgccgcc 28385362 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctcc 220 |||||||||||||||||||| Sbjct: 22547766 cccccgccgccgccgcctcc 22547785 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 tcccccgccgccgccgcctc 219 |||||||||||||||||||| Sbjct: 17141888 tcccccgccgccgccgcctc 17141869 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctcca 221 ||||| |||||||||||||||||| Sbjct: 13928089 cctcctccgccgccgccgcctcca 13928066 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 7018271 cctcccccgccgccgccgcc 7018290 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 3548661 cctcccccgccgccgccgcc 3548642 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 3092737 cctcccccgccgccgccgcc 3092756
>emb|Z14995.1|ZMNRNA53 Z.mays mRNA for U5snRNA (U53) Length = 1300 Score = 145 bits (73), Expect = 1e-31 Identities = 100/109 (91%) Strand = Plus / Plus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 795 acgcagctgcgcagtgggcacaaagcgaactattctttcgccttttactaaagaataccg 854 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggggtctctc 109 ||||| | |||||| |||||||||||| |||||||||||| |||||| Sbjct: 855 tgtgcccgctgcaacaagcagcatacgcctatttttgaagggttctctc 903
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 139 bits (70), Expect = 8e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 31226 acgcagctgcgcggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 31285 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggg 102 ||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 31286 tgtgcgcgccgcaattagcagcatacgctaatttttggaggg 31327
>dbj|AK060566.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-A01, full insert sequence Length = 1208 Score = 139 bits (70), Expect = 8e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1 acgcagctgcgcggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 60 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggg 102 ||||| | | ||||||||||||||||||||||||||| |||| Sbjct: 61 tgtgcgcgccgcaattagcagcatacgctaatttttggaggg 102
>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence Length = 134553 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111499 gcagctgcgcagtgggcacagagcgaactattctttcgccttttactaaagaataccgtg 111558 Query: 63 tgcacactgcaattagcagcat 84 ||| | |||||| ||||||||| Sbjct: 111559 tgctcgctgcaaatagcagcat 111580
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3023077 gcagctgcgcagtgggcacagagcgaactattctttcgccttttactaaagaataccgtg 3023136 Query: 63 tgcacactgcaattagcagcat 84 ||| | |||||| ||||||||| Sbjct: 3023137 tgctcgctgcaaatagcagcat 3023158 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 205 cgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||| |||||||||||||||| Sbjct: 6425517 cgccgccgccgccgccaccttcaccgccgc 6425488 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctcc 220 ||||||||||||||||||||| Sbjct: 17905573 tcccccgccgccgccgcctcc 17905593 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacct 224 ||||||||||||||||||||| Sbjct: 12501248 ccgccgccgccgcctccacct 12501268 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 21604920 cctcccccgccgccgccgcc 21604901 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 18955670 cctcccccgccgccgccgcc 18955651 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 cccgccgccgccgcctccac 222 |||||||||||||||||||| Sbjct: 18341751 cccgccgccgccgcctccac 18341732 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 16987913 cctcccccgccgccgccgcc 16987894 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 15915469 ccgccgccgccgcctccacc 15915488 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 15869536 cctcccccgccgccgccgcc 15869555 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 cttcttccgcgcggcgcagc 336 |||||||||||||||||||| Sbjct: 6667773 cttcttccgcgcggcgcagc 6667754 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 tcccccgccgccgccgcctc 219 |||||||||||||||||||| Sbjct: 1149186 tcccccgccgccgccgcctc 1149167
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3022998 gcagctgcgcagtgggcacagagcgaactattctttcgccttttactaaagaataccgtg 3023057 Query: 63 tgcacactgcaattagcagcat 84 ||| | |||||| ||||||||| Sbjct: 3023058 tgctcgctgcaaatagcagcat 3023079 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 205 cgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||| |||||||||||||||| Sbjct: 6427503 cgccgccgccgccgccaccttcaccgccgc 6427474 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctcc 220 ||||||||||||||||||||| Sbjct: 17914826 tcccccgccgccgccgcctcc 17914846 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacct 224 ||||||||||||||||||||| Sbjct: 12508588 ccgccgccgccgcctccacct 12508608 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 21616583 cctcccccgccgccgccgcc 21616564 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 18966900 cctcccccgccgccgccgcc 18966881 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 cccgccgccgccgcctccac 222 |||||||||||||||||||| Sbjct: 18351404 cccgccgccgccgcctccac 18351385 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 16996953 cctcccccgccgccgccgcc 16996934 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 15923710 ccgccgccgccgcctccacc 15923729 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 15877777 cctcccccgccgccgccgcc 15877796 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 cttcttccgcgcggcgcagc 336 |||||||||||||||||||| Sbjct: 6670159 cttcttccgcgcggcgcagc 6670140 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 tcccccgccgccgccgcctc 219 |||||||||||||||||||| Sbjct: 1149183 tcccccgccgccgccgcctc 1149164
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 28006595 acgcagctgcgcggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 28006536 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggg 102 ||||| | | ||| |||||||||||||| ||||||| |||| Sbjct: 28006535 tgtgcgcgccgcacatagcagcatacgcttatttttggaggg 28006494 Score = 109 bits (55), Expect = 7e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 ||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 25882252 acgcagctgcgtggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 25882311 Query: 61 tgtgcacactgcaattagcagcatacgctaa 91 ||||| | | |||||||||||||||||||| Sbjct: 25882312 tgtgcgcgccacaattagcagcatacgctaa 25882342 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 377 cgcctccctcgcccgccgcgccaccctct 405 |||||||| ||||||||||||| |||||| Sbjct: 27692932 cgcctcccccgcccgccgcgccgccctct 27692904 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctcc 220 ||||||||||||||||||||| Sbjct: 26205379 tcccccgccgccgccgcctcc 26205399 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccaccttcaccgccgc 234 ||||| |||||||| ||||| || ||||||||||||| Sbjct: 4746317 cctcctccgccgcctccgccgccgccttcaccgccgc 4746353 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctcc 220 ||||||||||||||||||||| Sbjct: 3424630 tcccccgccgccgccgcctcc 3424650 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 11547665 cctcccccgccgccgccgcc 11547646 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 10374349 cctcccccgccgccgccgcc 10374330 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 7982581 ccgccgccgccgcctccacc 7982600 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 3676036 ccgccgccgccgcctccacc 3676055 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 3227335 cctcccccgccgccgccgcc 3227316 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 cccgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||| ||||| ||||||||| Sbjct: 1639038 cccgccgccgccgccgccaccaccaccgccgc 1639069
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 84087 acgcagctgcgcggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 84028 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggg 102 ||||| | | ||| |||||||||||||| ||||||| |||| Sbjct: 84027 tgtgcgcgccgcacatagcagcatacgcttatttttggaggg 83986
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 |||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 4090 acgcagctgcgcggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 4031 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggg 102 ||||| | | ||| |||||||||||||| ||||||| |||| Sbjct: 4030 tgtgcgcgccgcacatagcagcatacgcttatttttggaggg 3989
>ref|XM_483371.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1601 Score = 109 bits (55), Expect = 7e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 ||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1 acgcagctgcgtggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 60 Query: 61 tgtgcacactgcaattagcagcatacgctaa 91 ||||| | | |||||||||||||||||||| Sbjct: 61 tgtgcgcgccacaattagcagcatacgctaa 91
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 109 bits (55), Expect = 7e-21 Identities = 110/127 (86%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 ||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 26237939 acgcagctgcgtggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 26237880 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggggtctctctgtcag-gagg 119 ||||| | | || | ||||||||||||||||||||| |||| | |||| |||| |||| Sbjct: 26237879 tgtgcgcgccacattaagcagcatacgctaatttttggagggcgccctctctcagagagg 26237820 Query: 120 gccccac 126 ||||||| Sbjct: 26237819 gccccac 26237813 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccaccttcaccgccgc 234 |||||||||||||||||||| ||||||||| Sbjct: 13476880 ccgccgccgccgcctccacccccaccgccgc 13476850 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||| ||||| ||||||||| Sbjct: 7829039 cccccgccgccgccgccgccaccgccaccgccgc 7829072 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccacc 223 ||||| |||||||||||||||||||| Sbjct: 6166240 cctccaccgccgccgccgcctccacc 6166265 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcctcca 221 |||||||||||||||||| |||||| Sbjct: 25451567 gcctcccccgccgccgccacctcca 25451591 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctcc 220 |||||||||||||||||||| Sbjct: 24567690 cccccgccgccgccgcctcc 24567709 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 5570031 ccgccgccgccgcctccacc 5570050 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 362 gctcctcgccgccgacgcctccctcgcc 389 |||||||||||||| ||||| ||||||| Sbjct: 5165019 gctcctcgccgccgccgcctacctcgcc 5164992 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctc 219 |||||||||||||||||||| Sbjct: 5015199 tcccccgccgccgccgcctc 5015218 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 196 agcctcccccgccgccgccgcctccacc 223 ||||||| |||||||||||||| ||||| Sbjct: 3157194 agcctcctccgccgccgccgccgccacc 3157167 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 3141184 ccgccgccgccgcctccacc 3141165 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 918034 cctcccccgccgccgccgcc 918053 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 917720 cctcccccgccgccgccgcc 917739
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 109 bits (55), Expect = 7e-21 Identities = 110/127 (86%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 ||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 12567 acgcagctgcgtggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 12508 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggggtctctctgtcag-gagg 119 ||||| | | || | ||||||||||||||||||||| |||| | |||| |||| |||| Sbjct: 12507 tgtgcgcgccacattaagcagcatacgctaatttttggagggcgccctctctcagagagg 12448 Query: 120 gccccac 126 ||||||| Sbjct: 12447 gccccac 12441
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 109 bits (55), Expect = 7e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 ||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 68039 acgcagctgcgtggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 68098 Query: 61 tgtgcacactgcaattagcagcatacgctaa 91 ||||| | | |||||||||||||||||||| Sbjct: 68099 tgtgcgcgccacaattagcagcatacgctaa 68129
>dbj|AK060548.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-H04, full insert sequence Length = 1601 Score = 109 bits (55), Expect = 7e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 ||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1 acgcagctgcgtggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 60 Query: 61 tgtgcacactgcaattagcagcatacgctaa 91 ||||| | | |||||||||||||||||||| Sbjct: 61 tgtgcgcgccacaattagcagcatacgctaa 91
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 109 bits (55), Expect = 7e-21 Identities = 110/127 (86%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 ||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 129797 acgcagctgcgtggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 129738 Query: 61 tgtgcacactgcaattagcagcatacgctaatttttgaaggggtctctctgtcag-gagg 119 ||||| | | || | ||||||||||||||||||||| |||| | |||| |||| |||| Sbjct: 129737 tgtgcgcgccacattaagcagcatacgctaatttttggagggcgccctctctcagagagg 129678 Query: 120 gccccac 126 ||||||| Sbjct: 129677 gccccac 129671
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaatta 77 ||||| |||||||||||||||||||||||||||||||||||||||||| | | ||| || Sbjct: 27724187 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgcgcgccacaaata 27724246 Query: 78 gcagcatacgctaatttttgaaggg 102 ||||||||| || ||||||| |||| Sbjct: 27724247 gcagcatactcttatttttggaggg 27724271 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 ||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27815200 gcagctgcgtggtgggcacaaagcgaactattctttcgccttttactaaagaataccgtg 27815141 Query: 63 tgcacactgcaattagcagcatac 86 ||| | | ||| ||||||||||| Sbjct: 27815140 tgcgcgccacaaatagcagcatac 27815117 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaattagcagca 83 |||||||||||||||||||||||||||||||||||||||||| | | ||| |||||||| Sbjct: 27722654 agcgaactattctttcgccttttactaaagaataccgtgtgcgcgccacaaatagcagca 27722713 Query: 84 tacgctaatttttgaaggg 102 || || |||||||||||| Sbjct: 27722714 aactcttatttttgaaggg 27722732 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaatta 77 ||||| ||||||||||||||||||||||||||||||| |||||||||| | | ||| || Sbjct: 27429502 gcacaaagcgaactattctttcgccttttactaaagagtaccgtgtgcgcgccacaaata 27429561 Query: 78 gcagcatacgctaatttttgaaggg 102 || |||||| || ||||||| |||| Sbjct: 27429562 gccgcatactcttatttttggaggg 27429586 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||||||| ||||||||||||||||||||||| Sbjct: 27425480 agcgaactattcttataccttttactaaagaataccgtgt 27425519 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccaccttcaccg 230 |||||| ||||||||||||| ||||||| ||||| Sbjct: 19073843 gcctccgccgccgccgccgcatccacctgcaccg 19073810 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 202 ccccgccgccgccgcctccaccttc 226 |||||||||||||||| |||||||| Sbjct: 24537271 ccccgccgccgccgccgccaccttc 24537247 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctcc 220 ||||||||||||||||||||| Sbjct: 21019936 tcccccgccgccgccgcctcc 21019956 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 199 ctcccccgccgccgccgcctccacc 223 ||||||||||||||||||| ||||| Sbjct: 12652701 ctcccccgccgccgccgccgccacc 12652677 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 cccgccgccgccgcctccacc 223 ||||||||||||||||||||| Sbjct: 7232844 cccgccgccgccgcctccacc 7232864 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ctcccccgccgccgccgcct 218 |||||||||||||||||||| Sbjct: 27210533 ctcccccgccgccgccgcct 27210552 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctcc 220 |||||||||||||||||||| Sbjct: 25535033 cccccgccgccgccgcctcc 25535052 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 20756166 cctcccccgccgccgccgcc 20756147 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 8421091 ccgccgccgccgcctccacc 8421072 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 8249230 ccgccgccgccgcctccacc 8249249 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ctcccccgccgccgccgcct 218 |||||||||||||||||||| Sbjct: 281354 ctcccccgccgccgccgcct 281373
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaatta 77 ||||| |||||||||||||||||||||||||||||||||||||||||| | | ||| || Sbjct: 73442 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgcgcgccacaaata 73501 Query: 78 gcagcatacgctaatttttgaaggg 102 ||||||||| || ||||||| |||| Sbjct: 73502 gcagcatactcttatttttggaggg 73526 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 ||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 164455 gcagctgcgtggtgggcacaaagcgaactattctttcgccttttactaaagaataccgtg 164396 Query: 63 tgcacactgcaattagcagcatac 86 ||| | | ||| ||||||||||| Sbjct: 164395 tgcgcgccacaaatagcagcatac 164372 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaattagcagca 83 |||||||||||||||||||||||||||||||||||||||||| | | ||| |||||||| Sbjct: 71909 agcgaactattctttcgccttttactaaagaataccgtgtgcgcgccacaaatagcagca 71968 Query: 84 tacgctaatttttgaaggg 102 || || |||||||||||| Sbjct: 71969 aactcttatttttgaaggg 71987
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaatta 77 ||||| |||||||||||||||||||||||||||||||||||||||||| | | ||| || Sbjct: 26696 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgcgcgccacaaata 26755 Query: 78 gcagcatacgctaatttttgaaggg 102 ||||||||| || ||||||| |||| Sbjct: 26756 gcagcatactcttatttttggaggg 26780 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 3 gcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccgtg 62 ||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 117709 gcagctgcgtggtgggcacaaagcgaactattctttcgccttttactaaagaataccgtg 117650 Query: 63 tgcacactgcaattagcagcatac 86 ||| | | ||| ||||||||||| Sbjct: 117649 tgcgcgccacaaatagcagcatac 117626 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaattagcagca 83 |||||||||||||||||||||||||||||||||||||||||| | | ||| |||||||| Sbjct: 25163 agcgaactattctttcgccttttactaaagaataccgtgtgcgcgccacaaatagcagca 25222 Query: 84 tacgctaatttttgaaggg 102 || || |||||||||||| Sbjct: 25223 aactcttatttttgaaggg 25241
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10, complete sequence Length = 116469 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaaagaataccg 60 ||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 55583 acgcagctgcgtggtgagcacaaagcgaactattctttcgccttttactaaagaataccg 55524 Query: 61 tgtgcacactgcaattagcagcatacgctaattttt 96 ||||| | | || ||||||||||||||| ||||| Sbjct: 55523 tgtgcgctccacatatagcagcatacgctatttttt 55488
>gb|AC139354.5| Medicago truncatula clone mth1-64n13, complete sequence Length = 114031 Score = 93.7 bits (47), Expect = 4e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaattag 78 |||| ||||||||||||||||||||||||||||||||||||||||| | | ||||||| Sbjct: 49076 cacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttacaattag 49017 Query: 79 cagcatacgctaatttttg 97 | |||||||||| |||||| Sbjct: 49016 cggcatacgctagtttttg 48998
>gb|AC124955.34| Medicago truncatula clone mth2-12l24, complete sequence Length = 115804 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgcac 67 ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29716 gcacatagcgaactattctttcgccttttactaaagaataccgtgtgcac 29667
>gb|AC147405.7| Medicago truncatula clone mth2-146n5, complete sequence Length = 147062 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgcac 67 ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117347 gcacatagcgaactattctttcgccttttactaaagaataccgtgtgcac 117396
>gb|AC130810.14| Medicago truncatula clone mth2-36b14, complete sequence Length = 117901 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgcac 67 ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42953 gcacatagcgaactattctttcgccttttactaaagaataccgtgtgcac 43002
>gb|AC158186.2| Selaginella moellendorffii clone JGIASXY-5F17, complete sequence Length = 30844 Score = 89.7 bits (45), Expect = 7e-15 Identities = 45/45 (100%) Strand = Plus / Plus Query: 21 cagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1104 cagagcgaactattctttcgccttttactaaagaataccgtgtgc 1148 Score = 77.8 bits (39), Expect = 2e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 26 cgaactattctttcgccttttactaaagaataccgtgtg 64 ||||||||||||||||||||||||||||||||||||||| Sbjct: 4550 cgaactattctttcgccttttactaaagaataccgtgtg 4588
>ref|NM_202716.1| Arabidopsis thaliana LAF3.1 (LONG AFTER FAR-RED 3); hydrolase AT3G55850 (LAF3.1) transcript variant AT3G55850.2 mRNA, complete cds Length = 2183 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 56
>gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome IV, near 15 cM, complete sequence Length = 113566 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 96481 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 96528
>gb|AC144478.20| Medicago truncatula clone mth2-20b20, complete sequence Length = 144248 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 67027 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 66980
>gb|AY295343.1| Arabidopsis thaliana LAF3 isoform 1 (LAF3) mRNA, complete cds Length = 2106 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 56
>emb|AL163832.1|ATF27K19 Arabidopsis thaliana DNA chromosome 3, BAC clone F27K19 Length = 95111 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10801 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 10754 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14527 gcacaaagcgaactactctttcgccttttactaaagaataccgtgtgc 14480
>emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome 5, BAC clone T15N1 (ESSA project) Length = 86574 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 27335 gcacatagcgaactattctttcgccttttactaaagaataccgtgtgc 27288
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6 Length = 194892 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 150264 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 150217
>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16 Length = 103785 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 30969 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 31016
>emb|BX823543.1|CNS0A7E8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZE06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2083 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 56
>gb|DQ108734.1| Arabidopsis thaliana clone 15161 mRNA sequence Length = 349 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 18 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 65
>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2 Length = 84896 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12731 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 12684
>emb|AJ505695.1|ATH505695 Arabidopsis thaliana partial putative U5 small nuclear RNA (U5 snRNA gene), clone Ath-134c, 5' end incomplete Length = 108 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 52
>emb|AJ505694.1|ATH505694 Arabidopsis thaliana partial putative U5 small nuclear RNA (U5 snRNA gene), clone Ath-134b, 5' end incomplete Length = 113 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 55
>emb|AJ505693.1|ATH505693 Arabidopsis thaliana partial putative U5 small nuclear RNA (U5 snRNA gene), clone Ath-134a, 5' end incomplete Length = 94 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 gcacatagcgaactattctttcgccttttactaaagaataccgtgtgc 55
>gb|AC007230.2|T23K8 Arabidopsis thaliana chromosome 1 BAC T23K8 sequence, complete sequence Length = 53090 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9788 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 9835
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 107527 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 17389 gcacatagcgaactattctttcgccttttactaaagaataccgtgtgc 17436 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 25742 cctcccccgccgccgccgcc 25723
>gb|AC002062.1|F20P5 Sequence of BAC F20P5 from Arabidopsis thaliana chromosome 1, complete sequence Length = 114505 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 32938 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 32891
>dbj|AP006390.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT04O07, TM0264, complete sequence Length = 52203 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 45863 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 45816
>dbj|AP006382.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT32J05, TM0238, complete sequence Length = 131947 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4392 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 4439
>gb|AC002396.1| Arabidopsis thaliana chromosome I BAC F3I6 genomic sequence, complete sequence Length = 122358 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4510 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 4463
>gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete sequence Length = 113210 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaattag 78 |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 87394 cacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgtcacaattag 87453 Query: 79 cagcatacgctaatttttg 97 | |||||||||| |||||| Sbjct: 87454 cggcatacgctagtttttg 87472
>gb|AC124214.8| Medicago truncatula clone mth2-36a23, complete sequence Length = 118803 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtg 64 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 50647 gcacaaagcgaactattctttcgccttttactaaagaataccgtgtg 50601
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 25355 cacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 25309 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcc 217 ||||||||||||||||||||| Sbjct: 62415 gcctcccccgccgccgccgcc 62395
>emb|CR931728.1| Medicago truncatula chromosome 5 clone mth2-175g3, COMPLETE SEQUENCE Length = 115300 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaattag 78 |||| ||||||||||||||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 39550 cacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgttgctattag 39491 Query: 79 cagcatacgctaatttttg 97 | |||||| ||| |||||| Sbjct: 39490 cggcatacactagtttttg 39472
>gb|AC150705.16| Medicago truncatula clone mth2-132b13, complete sequence Length = 121342 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaattag 78 |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 65720 cacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgtcacaattag 65661 Query: 79 cagcatacgctaatttttg 97 | |||||||||| |||||| Sbjct: 65660 cggcatacgctagtttttg 65642 Score = 83.8 bits (42), Expect = 4e-13 Identities = 45/46 (97%) Strand = Plus / Minus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtg 64 |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 68805 cacatagcgaactattctttcgccttttactaaagaataccgtgtg 68760
>gb|AC121233.16| Medicago truncatula clone mth2-14g13, complete sequence Length = 129617 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaattag 78 |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 20167 cacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgtcacaattag 20226 Query: 79 cagcatacgctaatttttg 97 | |||||||||| |||||| Sbjct: 20227 cggcatacgctagtttttg 20245
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 34646 cacaaagcgaactattctttcgccttttactaaagaataccgtgtgc 34692
>emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c21, COMPLETE SEQUENCE Length = 210117 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaattag 78 |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 168215 cacatagcgaactattctttcgccttttactaaagaataccgtgtgagcgtcacaattag 168156 Query: 79 cagcatacgctaatttttg 97 | |||||||||| |||||| Sbjct: 168155 cggcatacgctagtttttg 168137 Score = 83.8 bits (42), Expect = 4e-13 Identities = 45/46 (97%) Strand = Plus / Minus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtg 64 |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 174712 cacatagcgaactattctttcgccttttactaaagaataccgtgtg 174667 Score = 83.8 bits (42), Expect = 4e-13 Identities = 45/46 (97%) Strand = Plus / Minus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtg 64 |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 171628 cacatagcgaactattctttcgccttttactaaagaataccgtgtg 171583 Score = 83.8 bits (42), Expect = 4e-13 Identities = 45/46 (97%) Strand = Plus / Plus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtg 64 |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 67717 cacatagcgaactattctttcgccttttactaaagaataccgtgtg 67762 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtg 64 |||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 65166 cacatagcgaactattctttcgccttttactaaagaatactgtgtg 65211 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 28 aactattctttcgccttttactaaagaataccgtgtg 64 ||||||||||| |||||||||||||||||||| |||| Sbjct: 61576 aactattcttttgccttttactaaagaataccttgtg 61612
>gb|AC144759.11| Medicago truncatula clone mth2-15b21, complete sequence Length = 124666 Score = 83.8 bits (42), Expect = 4e-13 Identities = 45/46 (97%) Strand = Plus / Plus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtg 64 |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 67712 cacatagcgaactattctttcgccttttactaaagaataccgtgtg 67757 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtg 64 |||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 65161 cacatagcgaactattctttcgccttttactaaagaatactgtgtg 65206 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 28 aactattctttcgccttttactaaagaataccgtgtg 64 ||||||||||| |||||||||||||||||||| |||| Sbjct: 61571 aactattcttttgccttttactaaagaataccttgtg 61607
>gb|AC123596.13| Medicago truncatula clone mth1-17n5, complete sequence Length = 120055 Score = 83.8 bits (42), Expect = 4e-13 Identities = 45/46 (97%) Strand = Plus / Plus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtg 64 |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 65053 cacatagcgaactattctttcgccttttactaaagaataccgtgtg 65098 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtg 64 |||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 62502 cacatagcgaactattctttcgccttttactaaagaatactgtgtg 62547 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 28 aactattctttcgccttttactaaagaataccgtgtg 64 ||||||||||| |||||||||||||||||||| |||| Sbjct: 58912 aactattcttttgccttttactaaagaataccttgtg 58948
>gb|AC007202.3|T8K14 Arabidopsis thaliana chromosome 1 BAC T8K14 sequence, complete sequence Length = 80374 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgtg 64 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 14357 agcgaactattctttcgccttttactaaagaataccgtgtg 14397 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 41 ccttttactaaagaataccgtgtg 64 |||||||||||||||||||||||| Sbjct: 14042 ccttttactaaagaataccgtgtg 14065
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaatta 77 ||||| ||||||||||||||||||||||||||||||| |||||||||| | | ||| || Sbjct: 48571 gcacaaagcgaactattctttcgccttttactaaagagtaccgtgtgcgcgccacaaata 48630 Query: 78 gcagcatacgctaatttttgaaggg 102 || |||||| || ||||||| |||| Sbjct: 48631 gccgcatactcttatttttggaggg 48655 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||||||| ||||||||||||||||||||||| Sbjct: 44549 agcgaactattcttataccttttactaaagaataccgtgt 44588
>ref|NM_189489.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1341 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 305 cgacgagcacgacttcttccgcgcggcgcagctcggggacctcgacgccctgggcgcgct 364 ||||||| ||||| | ||||||||||||||||| || ||| || ||||||| ||| || Sbjct: 33 cgacgagtacgacctgttccgcgcggcgcagctgggcgacatccacgccctctccgccct 92 Query: 365 cctcgccgccgacgcctccctcgcccgccgcgccac 400 ||||||||||||| || | ||||||||||||||||| Sbjct: 93 cctcgccgccgaccccgcgctcgcccgccgcgccac 128
>gb|AY630782.1| Arabidopsis thaliana hypothetical protein (At3G55860) mRNA, complete cds, alternatively spliced Length = 1462 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 8 gcacaaagcgaactactctttcgccttttactaaagaataccgtgtgc 55
>gb|AY630781.1| Arabidopsis thaliana hypothetical protein (At3G55860) mRNA, complete cds, alternatively spliced Length = 1381 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 8 gcacaaagcgaactactctttcgccttttactaaagaataccgtgtgc 55
>gb|AC144617.10| Medicago truncatula clone mth2-7m9, complete sequence Length = 122853 Score = 79.8 bits (40), Expect = 6e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||||||||||||||||||||||||||||||||| Sbjct: 41182 agcgaactattctttcgccttttactaaagaataccgtgt 41221
>gb|AC121237.19| Medicago truncatula clone mth2-22g11, complete sequence Length = 127731 Score = 79.8 bits (40), Expect = 6e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||||||||||||||||||||||||||||||||| Sbjct: 77569 agcgaactattctttcgccttttactaaagaataccgtgt 77608
>gb|AC132565.28| Medicago truncatula clone mth2-4a8, complete sequence Length = 134155 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 33751 gcacatagcgaactattcttttgccttttactaaagaataccgtgtgc 33798
>gb|AC119411.16| Medicago truncatula clone mth2-23c14, complete sequence Length = 106790 Score = 79.8 bits (40), Expect = 6e-12 Identities = 40/40 (100%) Strand = Plus / Minus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||||||||||||||||||||||||||||||||| Sbjct: 87689 agcgaactattctttcgccttttactaaagaataccgtgt 87650 Score = 79.8 bits (40), Expect = 6e-12 Identities = 40/40 (100%) Strand = Plus / Minus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||||||||||||||||||||||||||||||||| Sbjct: 79572 agcgaactattctttcgccttttactaaagaataccgtgt 79533 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 28 aactattctttcgccttttactaaagaataccgtgt 63 |||||||||||||||||||||||||||||||||||| Sbjct: 90134 aactattctttcgccttttactaaagaataccgtgt 90099 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 24 agcgaactattctttcgccttttactaaagaatac 58 ||||||||||||||||||||||||||||||||||| Sbjct: 95958 agcgaactattctttcgccttttactaaagaatac 95924 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 31 tattctttcgccttttactaaagaataccgtgt 63 |||||||| |||||||| ||||||||||||||| Sbjct: 92101 tattcttttgccttttattaaagaataccgtgt 92069 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Minus Query: 71 gcaattagcagcatacgctaatttttgaaggg 102 ||||||||| ||||||||||||||| |||||| Sbjct: 88965 gcaattagcggcatacgctaattttggaaggg 88934
>gb|AC138130.9| Medicago truncatula clone mth2-31d24, complete sequence Length = 146386 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaagaataccgtgtgc 65 ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 36555 gcacaaagtgaactattctttcgccttttactaaagaataccgtgtgc 36602
>gb|AC146755.23| Medicago truncatula clone mth2-15i15, complete sequence Length = 108159 Score = 79.8 bits (40), Expect = 6e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||||||||||||||||||||||||||||||||| Sbjct: 40583 agcgaactattctttcgccttttactaaagaataccgtgt 40622
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 305 cgacgagcacgacttcttccgcgcggcgcagctcggggacctcgacgccctgggcgcgct 364 ||||||| ||||| | ||||||||||||||||| || ||| || ||||||| ||| || Sbjct: 43056258 cgacgagtacgacctgttccgcgcggcgcagctgggcgacatccacgccctctccgccct 43056317 Query: 365 cctcgccgccgacgcctccctcgcccgccgcgccac 400 ||||||||||||| || | ||||||||||||||||| Sbjct: 43056318 cctcgccgccgaccccgcgctcgcccgccgcgccac 43056353 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccaccttcaccgc 231 ||||||||||||||||||||| |||||| Sbjct: 15606414 ccgccgccgccgcctccacctccaccgc 15606387 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 193 cggagcctcccccgccgccgccgcctccaccttc 226 ||||||| || ||||||||||||||||| ||||| Sbjct: 42572425 cggagccgccgccgccgccgccgcctcctccttc 42572392 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcc 217 ||||||||||||||||||||| Sbjct: 18048178 gcctcccccgccgccgccgcc 18048198 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 gcgctcctcgccgccgacgcc 380 ||||||||||||||||||||| Sbjct: 12327627 gcgctcctcgccgccgacgcc 12327647 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 206 gccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||||| | ||||||| Sbjct: 2560330 gccgccgccgcctccacctcccccgccgc 2560302 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 42416979 cctcccccgccgccgccgcc 42416998 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 39766374 cctcccccgccgccgccgcc 39766355 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 195 gagcctcccccgccgccgccgcctccac 222 |||||||| |||||||||||||| |||| Sbjct: 37559563 gagcctccgccgccgccgccgccgccac 37559536 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 33227989 cctcccccgccgccgccgcc 33227970 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctcca 221 ||||| |||||||||||||||||| Sbjct: 32926020 cctccgccgccgccgccgcctcca 32926043 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 cgccgccgccgcctccacct 224 |||||||||||||||||||| Sbjct: 31693194 cgccgccgccgcctccacct 31693175 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 ggcgcgctcctcgccgccgacgcc 380 |||||||||||||||| ||||||| Sbjct: 27890707 ggcgcgctcctcgccggcgacgcc 27890730 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 27035188 cctcccccgccgccgccgcc 27035207 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 22033024 ccgccgccgccgcctccacc 22033043 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 21106030 cctcccccgccgccgccgcc 21106011 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 368 cgccgccgacgcctccctcgcccg 391 ||||||||||||||||||| |||| Sbjct: 18107598 cgccgccgacgcctccctcccccg 18107575 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 11568915 ccgccgccgccgcctccacc 11568896 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 11066635 cctcccccgccgccgccgcc 11066654 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctccaccttcaccgcc 232 ||||||||||||||||| ||||| ||||||| Sbjct: 7711589 cccccgccgccgccgccgccaccgccaccgcc 7711620 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 4243321 cctcccccgccgccgccgcc 4243340
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 305 cgacgagcacgacttcttccgcgcggcgcagctcggggacctcgacgccctgggcgcgct 364 ||||||| ||||| | ||||||||||||||||| || ||| || ||||||| ||| || Sbjct: 53287 cgacgagtacgacctgttccgcgcggcgcagctgggcgacatccacgccctctccgccct 53346 Query: 365 cctcgccgccgacgcctccctcgcccgccgcgccac 400 ||||||||||||| || | ||||||||||||||||| Sbjct: 53347 cctcgccgccgaccccgcgctcgcccgccgcgccac 53382
>emb|X15935.1|PSSNU5B Pea U5 snRNA (clone pPSU5.4) Length = 122 Score = 79.8 bits (40), Expect = 6e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||||||||||||||||||||||||||||||||| Sbjct: 22 agcgaactattctttcgccttttactaaagaataccgtgt 61
>emb|X15934.1|PSSNU5A Pea U5 snRNA (clone pPSU5.3) Length = 122 Score = 79.8 bits (40), Expect = 6e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||||||||||||||||||||||||||||||||| Sbjct: 22 agcgaactattctttcgccttttactaaagaataccgtgt 61
>dbj|AK106014.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B05, full insert sequence Length = 1693 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 305 cgacgagcacgacttcttccgcgcggcgcagctcggggacctcgacgccctgggcgcgct 364 ||||||| ||||| | ||||||||||||||||| || ||| || ||||||| ||| || Sbjct: 161 cgacgagtacgacctgttccgcgcggcgcagctgggcgacatccacgccctctccgccct 220 Query: 365 cctcgccgccgacgcctccctcgcccgccgcgccac 400 ||||||||||||| || | ||||||||||||||||| Sbjct: 221 cctcgccgccgaccccgcgctcgcccgccgcgccac 256
>ref|XM_470693.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1092 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 1 acgcagctgcgcagcgggcacagagcgaactattctttcgccttttactaa 51 |||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 1042 acgcagctgcgcggtgagcacagagcgaactattctttcgccttttactaa 1092
>emb|CT033770.2| Medicago truncatula chromosome 5 clone mth2-176e1, COMPLETE SEQUENCE Length = 138194 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 27 gaactattctttcgccttttactaaagaataccgtgt 63 ||||||||||||||||||||||||||||||||||||| Sbjct: 108084 gaactattctttcgccttttactaaagaataccgtgt 108120 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtgcacactgcaattag 78 |||| ||||||||||| ||| ||||||||||||||||||| ||||| || ||||||| Sbjct: 122559 cacatagcgaactattattttgccttttactaaagaatactgtgtgaacgtcacaattag 122618 Query: 79 cagcata 85 ||||||| Sbjct: 122619 cagcata 122625
>ref|NM_124753.1| Arabidopsis thaliana unknown protein AT5G53740 mRNA, complete cds Length = 828 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||||||||||||||||||||||||||| ||||| Sbjct: 296 agcgaactattctttcgccttttactaaagaatatcgtgt 257
>gb|AC016162.5|AC016162 Arabidopsis thaliana chromosome 1 BAC F3I17 genomic sequence, complete sequence Length = 107579 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 51267 agcgaactgttctttcgccttttactaaagaataccgtgt 51228
>gb|AC016163.6|AC016163 Arabidopsis thaliana chromosome 1 BAC F26A9 genomic sequence, complete sequence Length = 89653 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 84476 agcgaactgttctttcgccttttactaaagaataccgtgt 84437
>dbj|AB018115.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJP23 Length = 31827 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 ||||| |||||||||||||||||||||||||||||||||| Sbjct: 5734 agcgagctattctttcgccttttactaaagaataccgtgt 5695
>dbj|AB017066.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MGN6 Length = 61380 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||||||||||||||||||||||||||| ||||| Sbjct: 16043 agcgaactattctttcgccttttactaaagaatatcgtgt 16004
>emb|X13012.1|ATU5RNA Arabidopsis thaliana DNA for U5 small nuclear RNA Length = 1275 Score = 69.9 bits (35), Expect = 6e-09 Identities = 42/43 (97%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 24 agcgaactatt-ctttcgccttttactaaagaataccgtgtgc 65 ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 701 agcgaactatttctttcgccttttactaaagaataccgtgtgc 743
>emb|X74440.1|PPU5SNRNA P.polycephalum U5 snRNA (121 bp) Length = 121 Score = 69.9 bits (35), Expect = 6e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 21 cagagcgaactattctttcgccttttactaaagaataccgtgt 63 |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 18 cagatcgaattattctttcgccttttactaaagaataccgtgt 60
>emb|X74441.1|PPU5SNR2 P.polycephalum U5 snRNA (122 bp) Length = 122 Score = 69.9 bits (35), Expect = 6e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 21 cagagcgaactattctttcgccttttactaaagaataccgtgt 63 |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 18 cagatcgaattattctttcgccttttactaaagaataccgtgt 60
>gb|AC130800.23| Medicago truncatula clone mth2-36b7, complete sequence Length = 133868 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaa 55 ||||| ||||||||||||||||||||||||| |||||| Sbjct: 86829 gcacaaagcgaactattctttcgccttttacaaaagaa 86792
>emb|CR931732.2| Medicago truncatula chromosome 5 clone mth2-117e11, COMPLETE SEQUENCE Length = 117393 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 26 cgaactattctttcgccttttactaaagaa 55 |||||||||||||||||||||||||||||| Sbjct: 54296 cgaactattctttcgccttttactaaagaa 54267
>emb|X00279.1|PSRNA6 Pea U5 snRNA6 sequence (class U5 C) Length = 121 Score = 60.0 bits (30), Expect = 6e-06 Identities = 43/46 (93%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 19 cacagagcgaactattctttcgccttttactaaagaataccgtgtg 64 |||| |||||||||| |||||||||||||||||||||||| ||||| Sbjct: 17 cacaaagcgaactat-ctttcgccttttactaaagaatactgtgtg 61
>gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, partial sequence Length = 140590 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 30 ctattctttcgccttttactaaagaatac 58 ||||||||||||||||||||||||||||| Sbjct: 15496 ctattctttcgccttttactaaagaatac 15468
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccaccttcaccgccg 233 |||||||||||||||||| |||||||| |||||||| Sbjct: 3937604 cctcccccgccgccgccgtctccacctccaccgccg 3937569 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 11136 cctcccccgccgccgccgcc 11155
>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence Length = 106747 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 19 cacagagcgaactattctttcgccttttactaaaga 54 |||| ||| ||||||||||||||||||||||||||| Sbjct: 34295 cacatagcaaactattctttcgccttttactaaaga 34330
>emb|X00278.1|PSRNA8 Pea U5 snRNA8 sequence (class U5 8) Length = 121 Score = 56.0 bits (28), Expect = 9e-05 Identities = 38/40 (95%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||| |||||||||||||||||||||||| |||| Sbjct: 22 agcgaactat-ctttcgccttttactaaagaatactgtgt 60
>emb|X00277.1|PSRNA5 Pea U5 snRNA5 sequence (class U5 A) Length = 122 Score = 56.0 bits (28), Expect = 9e-05 Identities = 38/40 (95%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||| |||||||||||||||||||||||| |||| Sbjct: 22 agcgaactat-ctttcgccttttactaaagaatactgtgt 60
>gb|K02358.1|PEAUR5F Pea U5 small nuclear RNA 7b (class U5B), complete Length = 123 Score = 56.0 bits (28), Expect = 9e-05 Identities = 38/40 (95%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||| |||||||||||||||||||||||| |||| Sbjct: 23 agcgaactat-ctttcgccttttactaaagaatactgtgt 61
>gb|K02357.1|PEAUR5E Pea U5 small nuclear RNA 7a (class U5B), complete Length = 123 Score = 56.0 bits (28), Expect = 9e-05 Identities = 38/40 (95%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaagaataccgtgt 63 |||||||||| |||||||||||||||||||||||| |||| Sbjct: 23 agcgaactat-ctttcgccttttactaaagaatactgtgt 61
>gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete sequence Length = 129728 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 18 gcacagagcgaactattctttcgccttttactaaa 52 ||||||| ||||||||||||| ||||||||||||| Sbjct: 39405 gcacagatcgaactattcttttgccttttactaaa 39439
>gb|AY705674.1| Oikopleura dioica Prop-b gene, complete cds Length = 6899 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 32 attctttcgccttttactaaagaataccgtg 62 ||||||||||||||||||||||||| ||||| Sbjct: 1287 attctttcgccttttactaaagaattccgtg 1257
>ref|XM_476149.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2469 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccaccttcacc 229 |||||||||||||||||||||||||| Sbjct: 49 ccgccgccgccgcctccaccttcacc 74
>gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0003P07, complete sequence Length = 175116 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 205 cgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||| |||||||||||||||| Sbjct: 143547 cgccgccgccgccgccaccttcaccgccgc 143518
>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0074P11, complete sequence Length = 148753 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccaccttcacc 229 |||||||||||||||||||||||||| Sbjct: 80036 ccgccgccgccgcctccaccttcacc 80061
>dbj|AK067394.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105M16, full insert sequence Length = 2728 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccaccttcacc 229 |||||||||||||||||||||||||| Sbjct: 152 ccgccgccgccgcctccaccttcacc 177
>emb|Z11883.1|STU1SN126 S.tuberosum U1snRNA variant genes U1-1, U1-2, U1-3, U1-4, U1-5 and U1-6 Length = 4421 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 18 gcacagagcgaactattctttcgccttttactaaagaatacc 59 ||||||| ||||| |||||| |||||||||||||||||||| Sbjct: 938 gcacagaacgaacagttcttttgccttttactaaagaatacc 897
>ref|XM_612207.2| PREDICTED: Bos taurus similar to suppressor of cytokine signaling 7 (LOC540586), mRNA Length = 2214 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 196 agcctcccccgccgccgccgcctcc 220 ||||||||||||||||||||||||| Sbjct: 740 agcctcccccgccgccgccgcctcc 764
>emb|AJ628164.1| Oikopleura dioica U5 small nuclear RNA gene Length = 111 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 34 tctttcgccttttactaaagaataccgtg 62 ||||||||||||||||||||||| ||||| Sbjct: 31 tctttcgccttttactaaagaattccgtg 59
>gb|AC170580.3| Medicago truncatula chromosome 7 BAC clone mte1-32m6, complete sequence Length = 44332 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 24 agcgaactattctttcgccttttactaaa 52 |||| |||||||||||||||||||||||| Sbjct: 28568 agcggactattctttcgccttttactaaa 28596
>gb|M55437.1|CRUGNAO1 Hamster G-o alpha subunit mRNA Length = 673 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccaccttcaccgcc 232 ||||||||||||||||||||||| ||||| Sbjct: 188 ccgccgccgccgcctccaccttctccgcc 216
>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048I21, complete sequence Length = 137650 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 200 tcccccgccgccgccgcctccacc 223 |||||||||||||||||||||||| Sbjct: 50439 tcccccgccgccgccgcctccacc 50416
>ref|XM_475265.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1758 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctccacc 223 |||||||||||||||||||||||| Sbjct: 324 tcccccgccgccgccgcctccacc 347
>ref|XM_848541.1| PREDICTED: Canis familiaris similar to Calpain small subunit 1 (CSS1) (Calcium-dependent protease small subunit 1) (Calcium-dependent protease small subunit) (CDPS) (Calpain regulatory subunit) (Calcium-activated neutral proteinase small subunit) (CANP small subunit)..., transcript variant 1 (LOC611746), mRNA Length = 1439 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctcc 220 |||||||||||||||||||||||| Sbjct: 140 gcctcccccgccgccgccgcctcc 117
>gb|AC039057.8|AC039057 Homo sapiens chromosome 15 clone RP11-81G24 map 15q21.3, complete sequence Length = 174672 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctcc 220 |||||||||||||||||||||||| Sbjct: 141675 gcctcccccgccgccgccgcctcc 141652 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctcc 220 |||||||||||||||||||||||| Sbjct: 141657 gcctcccccgccgccgccgcctcc 141634 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctcc 220 |||||||||||||||||||||||| Sbjct: 141639 gcctcccccgccgccgccgcctcc 141616 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctcc 220 |||||||||||||||||||||||| Sbjct: 141621 gcctcccccgccgccgccgcctcc 141598 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctcc 220 |||||||||||||||||||||||| Sbjct: 141603 gcctcccccgccgccgccgcctcc 141580
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccaccttcaccgc 231 ||||||||||||||||||||| |||||| Sbjct: 44311 ccgccgccgccgcctccacctccaccgc 44284
>dbj|AK069844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031F21, full insert sequence Length = 2276 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctccacc 223 |||||||||||||||||||||||| Sbjct: 439 tcccccgccgccgccgcctccacc 462
>dbj|AK069233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012N02, full insert sequence Length = 1842 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccaccttcaccgc 231 ||||||||||||||||||||| |||||| Sbjct: 66 ccgccgccgccgcctccacctccaccgc 93
>ref|XM_512658.1| PREDICTED: Pan troglodytes similar to Fibrillarin (LOC456031), mRNA Length = 871 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 185 cctccaccgccgccgccgcctccacct 159
>ref|XM_524133.1| PREDICTED: Pan troglodytes similar to MHC class II regulatory factor RFX1 (RFX) (Enhancer factor C) (EF-C) (LOC468746), mRNA Length = 1977 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccacc 223 ||||||||||||||||||||| ||||| Sbjct: 1749 gcctcccccgccgccgccgccaccacc 1723
>ref|XM_469943.1| Oryza sativa (japonica cultivar-group), mRNA Length = 480 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctccac 222 ||||||||||||||||||||||| Sbjct: 386 tcccccgccgccgccgcctccac 408
>gb|BT020144.1| Homo sapiens fibrillarin mRNA, complete cds Length = 966 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 167 cctccaccgccgccgccgcctccacct 141
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctccacc 223 ||||||||||||||||||||||| Sbjct: 28592 cccccgccgccgccgcctccacc 28614
>gb|AF529186.1| Taenia solium U6 snRNA and U5 snRNA genes, complete sequence Length = 1009 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 34 tctttcgccttttactaaagaataccgtgtg 64 ||||||||||||||||||||| | ||||||| Sbjct: 979 tctttcgccttttactaaagatttccgtgtg 949
>gb|BC049826.1| Homo sapiens regulatory factor X, 1 (influences HLA class II expression), mRNA (cDNA clone MGC:47525 IMAGE:6043247), complete cds Length = 4346 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccacc 223 ||||||||||||||||||||| ||||| Sbjct: 1415 gcctcccccgccgccgccgccaccacc 1389
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 200 tcccccgccgccgccgcctccac 222 ||||||||||||||||||||||| Sbjct: 126776 tcccccgccgccgccgcctccac 126754 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcctcc 220 |||||| ||||||||||||||||| Sbjct: 95868 gcctccgccgccgccgccgcctcc 95891
>ref|XM_874466.1| PREDICTED: Bos taurus similar to protocadherin 10 isoform 2 precursor, transcript variant 4 (LOC531875), mRNA Length = 2877 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccaccttcaccgcc 232 ||||||||||||||||| ||||| ||||| ||||| Sbjct: 814 cctcccccgccgccgcctcctcctccttctccgcc 780
>ref|XM_874381.1| PREDICTED: Bos taurus similar to protocadherin 10 isoform 2 precursor, transcript variant 3 (LOC531875), mRNA Length = 4147 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccaccttcaccgcc 232 ||||||||||||||||| ||||| ||||| ||||| Sbjct: 814 cctcccccgccgccgcctcctcctccttctccgcc 780
>ref|XM_610378.2| PREDICTED: Bos taurus similar to protocadherin 10 isoform 2 precursor, transcript variant 1 (LOC531875), mRNA Length = 3682 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccaccttcaccgcc 232 ||||||||||||||||| ||||| ||||| ||||| Sbjct: 814 cctcccccgccgccgcctcctcctccttctccgcc 780
>ref|XM_864782.1| PREDICTED: Bos taurus similar to protocadherin 10 isoform 2 precursor, transcript variant 2 (LOC531875), mRNA Length = 5389 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccaccttcaccgcc 232 ||||||||||||||||| ||||| ||||| ||||| Sbjct: 1493 cctcccccgccgccgcctcctcctccttctccgcc 1459
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 195 gagcctcccccgccgccgccgcc 217 ||||||||||||||||||||||| Sbjct: 29123 gagcctcccccgccgccgccgcc 29101
>ref|XM_659035.1| Aspergillus nidulans FGSC A4 cytokinesis protein SepA (AN6523.2), mRNA Length = 5370 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcctccacc 223 ||||||||| ||||||||||||||||| Sbjct: 3099 gcctcccccaccgccgccgcctccacc 3125
>ref|NM_001436.2| Homo sapiens fibrillarin (FBL), mRNA Length = 1135 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 226 cctccaccgccgccgccgcctccacct 200
>emb|AJ410870.2|SSC410870 Sus scrofa COX7A1 gene, CAPNS1 gene, CKAP1 gene, POLR2I gene and CLIPR-59 gene (partial) Length = 147663 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcctccacc 223 ||||||||||||||||||||| ||||| Sbjct: 36935 gcctcccccgccgccgccgccgccacc 36961
>emb|X63789.1|TTSNRU51 T.thermophila genes for snRNA U5-1, snRNA U5-2 Length = 3364 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 36 tttcgccttttactaaagaataccgtg 62 ||||||||||||||||||| ||||||| Sbjct: 2267 tttcgccttttactaaagattaccgtg 2293 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 36 tttcgccttttactaaagaataccgtg 62 ||||||||||||||||||| ||||||| Sbjct: 1425 tttcgccttttactaaagattaccgtg 1451
>emb|X58841.1|TTU51 T.thermophila U5.1 snRNA Length = 118 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 36 tttcgccttttactaaagaataccgtg 62 ||||||||||||||||||| ||||||| Sbjct: 32 tttcgccttttactaaagattaccgtg 58
>gb|BC019260.1| Homo sapiens fibrillarin, mRNA (cDNA clone MGC:2347 IMAGE:3504198), complete cds Length = 1163 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 235 cctccaccgccgccgccgcctccacct 209
>ref|XM_971298.1| PREDICTED: Tribolium castaneum hypothetical protein LOC661532 (LOC661532), mRNA Length = 702 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccacc 223 |||||| |||||||||||||||||||| Sbjct: 642 gcctccaccgccgccgccgcctccacc 616
>emb|X56597.1|HSFIB Human humFib mRNA for fibrillarin Length = 1090 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 226 cctccaccgccgccgccgcctccacct 200
>gb|BT007521.1| Synthetic construct Homo sapiens fibrillarin mRNA, partial cds Length = 966 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 167 cctccaccgccgccgccgcctccacct 141
>gb|BT006830.1| Homo sapiens fibrillarin mRNA, complete cds Length = 966 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 167 cctccaccgccgccgccgcctccacct 141
>gb|AC022098.9| Homo sapiens chromosome 19 clone CTB-55O6, complete sequence Length = 237931 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcctccacc 223 ||||||||||||||||||||| ||||| Sbjct: 10244 gcctcccccgccgccgccgccaccacc 10270
>emb|CR622112.1| full-length cDNA clone CS0DC025YP09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1042 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 208 cctccaccgccgccgccgcctccacct 182
>emb|CR621210.1| full-length cDNA clone CS0DC015YB15 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1017 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 192 cctccaccgccgccgccgcctccacct 166
>emb|CR619306.1| full-length cDNA clone CS0DB001YI10 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1084 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 217 cctccaccgccgccgccgcctccacct 191
>emb|CR611406.1| full-length cDNA clone CS0DC017YN11 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1058 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 217 cctccaccgccgccgccgcctccacct 191
>emb|CR608183.1| full-length cDNA clone CS0DK012YP18 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1106 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 227 cctccaccgccgccgccgcctccacct 201
>emb|CR592096.1| full-length cDNA clone CS0DC026YC19 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1080 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 233 cctccaccgccgccgccgcctccacct 207
>emb|CR457069.1| Homo sapiens full open reading frame cDNA clone RZPDo834F0511D for gene FBL, fibrillarin; complete cds, incl. stopcodon Length = 966 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 167 cctccaccgccgccgccgcctccacct 141
>gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, complete sequence Length = 214530 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcctccacc 223 ||||||||||||||||||||| ||||| Sbjct: 186014 gcctcccccgccgccgccgccaccacc 186040
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 201 cccccgccgccgccgcctccacc 223 ||||||||||||||||||||||| Sbjct: 117319 cccccgccgccgccgcctccacc 117297
>gb|AC090056.2|AC090056 Oryza sativa chromosome 9 clone PAC0663H05, complete sequence Length = 161873 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 208 cgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||||| ||||||| Sbjct: 129979 cgccgccgcctccaccttctccgccgc 129953
>tpg|BK000354.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M74, complete sequence Length = 11473 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 208 cgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||||| ||||||| Sbjct: 6119 cgccgccgcctccaccttctccgccgc 6093
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 208 cgccgccgcctccaccttcaccgccgc 234 |||||||||||||||| |||||||||| Sbjct: 15752084 cgccgccgcctccaccatcaccgccgc 15752110 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcc 217 ||||||||||||||||||||| Sbjct: 1331967 gcctcccccgccgccgccgcc 1331987 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 23432723 cctcccccgccgccgccgcc 23432704 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 cccgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||| || |||| |||||||| Sbjct: 23156041 cccgccgccgccgccgccgcctttaccgccgc 23156072 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 cgccgccgcctccaccttcaccgc 231 |||||||||||||||| ||||||| Sbjct: 15729356 cgccgccgcctccaccatcaccgc 15729379 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 11073815 ccgccgccgccgcctccacc 11073796 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ccgccgcctccaccttcacc 229 |||||||||||||||||||| Sbjct: 10119298 ccgccgcctccaccttcacc 10119317 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 5675209 cctcccccgccgccgccgcc 5675228 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 cccgccgccgccgcctccaccttc 226 |||||||||||| ||||||||||| Sbjct: 5393835 cccgccgccgcctcctccaccttc 5393812 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctc 219 |||||||||||||||||||| Sbjct: 1737773 tcccccgccgccgccgcctc 1737792
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctc 219 ||||||||||||||||||||||| Sbjct: 14084051 gcctcccccgccgccgccgcctc 14084029 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 ccccgccgccgccgcctccacc 223 |||||||||||||||||||||| Sbjct: 20797682 ccccgccgccgccgcctccacc 20797661 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 192 ccggagcctcccccgccgccgccgcc 217 ||||||||||||| |||||||||||| Sbjct: 357477 ccggagcctccccagccgccgccgcc 357502 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccacct 224 ||||||||||||||||||||| Sbjct: 20684835 ccgccgccgccgcctccacct 20684815 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 ccccgccgccgccgcctccaccttc 226 |||| |||||||||||||||||||| Sbjct: 15056653 cccctccgccgccgcctccaccttc 15056677 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcc 217 ||||||||||||||||||||| Sbjct: 12613610 gcctcccccgccgccgccgcc 12613590 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 tcccccgccgccgccgcctcc 220 ||||||||||||||||||||| Sbjct: 8137239 tcccccgccgccgccgcctcc 8137219 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 ggagcctcccccgccgccgccgcc 217 |||| ||||||||||||||||||| Sbjct: 22381372 ggaggctcccccgccgccgccgcc 22381395 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 cgccgccgccgcctccacct 224 |||||||||||||||||||| Sbjct: 21733540 cgccgccgccgcctccacct 21733521 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccaccttcaccgc 231 ||||||||||||||||| ||| |||||| Sbjct: 20307594 ccgccgccgccgcctcctcctccaccgc 20307621 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcctcc 220 ||||||| |||||||||||||||| Sbjct: 17457855 gcctcccacgccgccgccgcctcc 17457878 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgc 216 |||||||||||||||||||| Sbjct: 17317196 gcctcccccgccgccgccgc 17317177 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 cgccgccgccgcctccaccttcac 228 ||||||||||||| |||||||||| Sbjct: 16089840 cgccgccgccgccgccaccttcac 16089863 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 2644405 cctcccccgccgccgccgcc 2644386 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 cccgccgccgccgcctccaccttcaccgccgc 234 |||||||||||||||||| ||| | ||||||| Sbjct: 2632537 cccgccgccgccgcctccgcctccgccgccgc 2632568
>gb|U83658.3|ENU83658 Emericella nidulans FH1/FH2 protein homolog (sepA) gene, complete cds Length = 6863 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcctccacc 223 ||||||||| ||||||||||||||||| Sbjct: 4064 gcctcccccaccgccgccgcctccacc 4090
>ref|NM_214318.1| Sus scrofa calpain I light subunit (CAPNS1), mRNA Length = 1929 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccacc 223 ||||||||||||||||||||| ||||| Sbjct: 144 gcctcccccgccgccgccgccgccacc 118
>ref|NM_002918.3| Homo sapiens regulatory factor X, 1 (influences HLA class II expression) (RFX1), mRNA Length = 4347 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccacc 223 ||||||||||||||||||||| ||||| Sbjct: 1417 gcctcccccgccgccgccgccaccacc 1391
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 194 ggagcctcccccgccgccgccgc 216 ||||||||||||||||||||||| Sbjct: 1041079 ggagcctcccccgccgccgccgc 1041057 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 gggcgcgctcctcgccgccg 375 |||||||||||||||||||| Sbjct: 4876196 gggcgcgctcctcgccgccg 4876177 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctcc 220 |||||||||||||||||||| Sbjct: 2677705 cccccgccgccgccgcctcc 2677724
>ref|XM_233955.3| PREDICTED: Rattus norvegicus kelch repeat and BTB (POZ) domain containing 9 (predicted) (Kbtbd9_predicted), mRNA Length = 5075 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctcc 220 ||||||||||||||||||||||| Sbjct: 71 cctcccccgccgccgccgcctcc 49
>dbj|AP005732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0014M19 Length = 129270 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctc 219 ||||||||||||||||||||||| Sbjct: 62986 gcctcccccgccgccgccgcctc 62964
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccaccttcaccgccgc 234 |||||||||||||||||||| ||||||||| Sbjct: 56563 ccgccgccgccgcctccacccccaccgccgc 56533
>gb|AY892716.1| Synthetic construct Homo sapiens clone FLH024765.01L fibrillarin (FBL) mRNA, partial cds Length = 966 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 167 cctccaccgccgccgccgcctccacct 141
>gb|AY890230.1| Synthetic construct Homo sapiens clone FLH024770.01X fibrillarin (FBL) mRNA, complete cds Length = 966 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 167 cctccaccgccgccgccgcctccacct 141
>gb|AY888436.1| Synthetic construct Homo sapiens clone FLH007298.01X fibrillarin (FBL) mRNA, complete cds Length = 966 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 167 cctccaccgccgccgccgcctccacct 141
>ref|XM_314211.2| Anopheles gambiae str. PEST ENSANGP00000022401 (ENSANGG00000021204), partial mRNA Length = 1188 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccaccttc 226 ||||||||||||||||||||||| Sbjct: 170 ccgccgccgccgcctccaccttc 148
>dbj|AK068103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129K12, full insert sequence Length = 2482 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccaccttcaccgccgc 234 |||||||||||||||||||| ||||||||| Sbjct: 212 ccgccgccgccgcctccacccccaccgccgc 242
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Plus Query: 34 tctttcgccttttactaaagaataccgtgtg 64 ||||||||||||||||||||| | ||||||| Sbjct: 370269 tctttcgccttttactaaagattgccgtgtg 370299
>gb|L26049.2|CREODA11X Chlamydomonas reinhardtii dynein heavy chain alpha (ODA11) gene, complete cds Length = 17941 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccaccttcaccgccgc 234 |||||||||||||| |||||| ||||||||| Sbjct: 16847 ccgccgccgccgccaccacctccaccgccgc 16817
>gb|AC006950.1|AC006950 Homo sapiens chromosome 19, cosmid R30669, complete sequence Length = 38875 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 3922 cctccaccgccgccgccgcctccacct 3948
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 208 cgccgccgcctccaccttcaccgccgc 234 |||||||||||||||| |||||||||| Sbjct: 15705317 cgccgccgcctccaccatcaccgccgc 15705343 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcc 217 ||||||||||||||||||||| Sbjct: 1331967 gcctcccccgccgccgccgcc 1331987 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 23360914 cctcccccgccgccgccgcc 23360895 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 cccgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||| || |||| |||||||| Sbjct: 23084232 cccgccgccgccgccgccgcctttaccgccgc 23084263 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 cgccgccgcctccaccttcaccgc 231 |||||||||||||||| ||||||| Sbjct: 15682589 cgccgccgcctccaccatcaccgc 15682612 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 11073512 ccgccgccgccgcctccacc 11073493 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ccgccgcctccaccttcacc 229 |||||||||||||||||||| Sbjct: 10119183 ccgccgcctccaccttcacc 10119202 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 5675202 cctcccccgccgccgccgcc 5675221 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 cccgccgccgccgcctccaccttc 226 |||||||||||| ||||||||||| Sbjct: 5393824 cccgccgccgcctcctccaccttc 5393801 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 tcccccgccgccgccgcctc 219 |||||||||||||||||||| Sbjct: 1737750 tcccccgccgccgccgcctc 1737769
>gb|AC005393.1|AC005393 Homo sapiens chromosome 19, CIT-HSP BAC 470n8, complete sequence Length = 123814 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 119728 cctccaccgccgccgccgcctccacct 119754
>emb|AL954854.3|CNS08CD8 Oryza sativa chromosome 12, . BAC OSJNBa0080D17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159718 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 208 cgccgccgcctccaccttcaccgccgc 234 |||||||||||||||| |||||||||| Sbjct: 73571 cgccgccgcctccaccatcaccgccgc 73545 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 cgccgccgcctccaccttcaccgc 231 |||||||||||||||| ||||||| Sbjct: 96299 cgccgccgcctccaccatcaccgc 96276
>emb|AM181327.1| Zea mays mRNA for putative glycosyltransferase (x34.2 gene) Length = 2130 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctcc 220 ||||||||||||||||||||||| Sbjct: 430 cctcccccgccgccgccgcctcc 408
>dbj|AB208795.1| Homo sapiens mRNA for ubiquitously transcribed tetratricopeptide repeat variant protein Length = 5372 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccaccttcaccgccgc 234 |||||||||||||| || ||||||||||||| Sbjct: 147 ccgccgccgccgccgccgccttcaccgccgc 177
>gb|L22251.1|NEMSNUD Ascaris lumbricoides small nuclear RNA (snRNA) U5 gene Length = 335 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 32 attctttcgccttttactaaaga 54 ||||||||||||||||||||||| Sbjct: 170 attctttcgccttttactaaaga 192
>gb|M59849.1|HUMFIBAA Human fibrillarin (Hfib1) mRNA, complete cds Length = 1104 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 195 cctccaccgccgccgccgcctccacct 169
>gb|M30448.1|HUMCSK2B Human casein kinase II beta subunit mRNA, complete cds Length = 2527 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacct 224 ||||| ||||||||||||||||||||| Sbjct: 1652 cctccaccgccgccgccgcctccacct 1626
>emb|X01693.1|TPRNU5A Tetrahymena pyriformis U5 A small nuclear RNA Length = 112 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 36 tttcgccttttactaaagaataccgtg 62 ||||||||||||||||||| ||||||| Sbjct: 32 tttcgccttttactaaagattaccgtg 58
>emb|X58964.1|HSIGRFX H.sapiens gene for MHC class II regulatory factor RFX Length = 3086 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccacc 223 ||||||||||||||||||||| ||||| Sbjct: 1275 gcctcccccgccgccgccgccaccacc 1249
>gb|M11779.1|PIGCALPB Pig calpain I light subunit mRNA, complete cds Length = 1375 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccacc 223 ||||||||||||||||||||| ||||| Sbjct: 144 gcctcccccgccgccgccgccgccacc 118
>gb|M11778.1|PIGCALPA Pig calpain I light subunit mRNA, complete cds Length = 1929 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccacc 223 ||||||||||||||||||||| ||||| Sbjct: 144 gcctcccccgccgccgccgccgccacc 118
>ref|XM_471044.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 645 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 207 ccgccgccgcctccaccttcaccgcc 232 ||||||||||| |||||||||||||| Sbjct: 514 ccgccgccgccgccaccttcaccgcc 489
>ref|XM_466482.1| Oryza sativa (japonica cultivar-group), mRNA Length = 702 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 190 ggccggagcctcccccgccgccgccgcctc 219 ||||| ||||||| |||||||||||||||| Sbjct: 438 ggccgcagcctcctccgccgccgccgcctc 467
>ref|XM_464420.1| Oryza sativa (japonica cultivar-group), mRNA Length = 636 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 359 cgcgctcctcgccgccgacgcc 380 |||||||||||||||||||||| Sbjct: 322 cgcgctcctcgccgccgacgcc 301
>ref|NM_189397.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2229 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 193 cggagcctcccccgccgccgccgcctccaccttc 226 ||||||| || ||||||||||||||||| ||||| Sbjct: 726 cggagccgccgccgccgccgccgcctcctccttc 693
>ref|XM_515513.1| PREDICTED: Pan troglodytes LOC459277 (LOC459277), mRNA Length = 3121 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccaccttcacc 229 ||||||||||||||||||||| |||| Sbjct: 30 ccgccgccgccgcctccacctccacc 5
>ref|XM_477220.1| Oryza sativa (japonica cultivar-group), mRNA Length = 846 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 201 cccccgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||| ||||| ||||||||| Sbjct: 99 cccccgccgccgccgccgccaccgccaccgccgc 66
>ref|XM_477140.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1512 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccacc 223 ||||| |||||||||||||||||||| Sbjct: 73 cctccaccgccgccgccgcctccacc 98
>ref|XM_506223.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1664_D08.105 mRNA Length = 1522 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccacc 223 ||||| |||||||||||||||||||| Sbjct: 74 cctccaccgccgccgccgcctccacc 99
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 205 cgccgccgccgcctccaccttcaccgccgc 234 |||||||||||||||| ||||||| ||||| Sbjct: 72522 cgccgccgccgcctcccccttcacggccgc 72493
>ref|XM_585174.2| PREDICTED: Bos taurus similar to ankyrin repeat domain protein 17 isoform a (LOC508405), mRNA Length = 6948 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacc 223 ||||| |||||||||||||||||||| Sbjct: 347 cctccgccgccgccgccgcctccacc 322
>ref|NM_182939.1| Mus musculus protein phosphatase 4, regulatory subunit 2 (Ppp4r2), mRNA Length = 3642 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 365 cctcgccgccgacgcctccctcgcccgccg 394 ||||||||||| ||||||||||| |||||| Sbjct: 233 cctcgccgccggcgcctccctcggccgccg 204
>gb|AC167018.4| Mus musculus BAC clone RP23-354F11 from chromosome 16, complete sequence Length = 199488 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 365 cctcgccgccgacgcctccctcgcccgccg 394 ||||||||||| ||||||||||| |||||| Sbjct: 183605 cctcgccgccggcgcctccctcggccgccg 183576
>gb|AC166903.2| Mus musculus BAC clone RP24-163K10 from chromosome 16, complete sequence Length = 184060 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 365 cctcgccgccgacgcctccctcgcccgccg 394 ||||||||||| ||||||||||| |||||| Sbjct: 41784 cctcgccgccggcgcctccctcggccgccg 41755
>gb|AY526375.1| Arachis hypogaea clone PM619 microsatellite sequence Length = 330 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccacctt 225 |||||||||||||||||||||| Sbjct: 258 ccgccgccgccgcctccacctt 237
>gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017D19, complete sequence Length = 142015 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccaccttc 226 |||||| |||||||||||||| |||||||| Sbjct: 44440 gcctccaccgccgccgccgcccccaccttc 44411
>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 363 ctcctcgccgccgacgcctccctcgc 388 ||||||||||||| |||||||||||| Sbjct: 138718 ctcctcgccgccgccgcctccctcgc 138693
>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete sequence Length = 249943 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 34 tctttcgccttttactaaagaataccgtgt 63 ||||||||||||||||||||| | |||||| Sbjct: 125480 tctttcgccttttactaaagattgccgtgt 125509
>emb|AL133545.10| Human DNA sequence from clone RP11-386N14 on chromosome X Contains the DUSP21 gene for dual specificity phosphatase 21, the 5' end of the UTX gene for ubiquitously transcribed tetratricopeptide repeat gene X chromosome and 3 CpG islands, complete sequence Length = 140717 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctccaccttcaccgccgc 234 |||| |||||||||||| || ||||||||||||| Sbjct: 69719 cccctgccgccgccgccgccgccttcaccgccgc 69752
>emb|X60063.1|GDJUNDG G.domesticus junD gene Length = 2988 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 199 ctcccccgccgccgccgcctcc 220 |||||||||||||||||||||| Sbjct: 1879 ctcccccgccgccgccgcctcc 1858
>gb|BC056340.1| Mus musculus protein phosphatase 4, regulatory subunit 2, mRNA (cDNA clone MGC:73463 IMAGE:5703151), complete cds Length = 2769 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 365 cctcgccgccgacgcctccctcgcccgccg 394 ||||||||||| ||||||||||| |||||| Sbjct: 52 cctcgccgccggcgcctccctcggccgccg 23
>gb|AC155648.14| Mus musculus 6 BAC RP24-88B16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199446 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 365 cctcgccgccgacgcctccctcgcccgccg 394 ||||||||||| ||||||||||| |||||| Sbjct: 89572 cctcgccgccggcgcctccctcggccgccg 89543
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 207 ccgccgccgcctccaccttcaccgcc 232 ||||||||||| |||||||||||||| Sbjct: 66831 ccgccgccgccgccaccttcaccgcc 66856
>gb|AC026347.17| Homo sapiens 3 BAC RP11-362A9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195430 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 tctttcgccttttactaaagaa 55 |||||||||||||||||||||| Sbjct: 53122 tctttcgccttttactaaagaa 53143
>gb|AC116664.1| Papio hamadryas, clone RP41-57E23, complete sequence Length = 175388 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccacc 223 |||||||||||||||||||| ||||| Sbjct: 167911 cctcccccgccgccgccgccgccacc 167886 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 agcctcccccgccgccgccgcctc 219 ||||||| |||||||||||||||| Sbjct: 104555 agcctccgccgccgccgccgcctc 104578
>ref|XM_292968.5| PREDICTED: Homo sapiens similar to Homeobox even-skipped homolog protein 2 (EVX-2) (LOC344191), mRNA Length = 1611 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 201 cccccgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||| ||||| ||||||||| Sbjct: 1463 cccccgccgccgccgccaccaccaccaccgccgc 1430
>dbj|AK084169.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230004M10 product:similar to PROTEIN PHOSPHATASE 4 REGULATORY SUBUNIT 2 [Homo sapiens], full insert sequence Length = 3263 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 365 cctcgccgccgacgcctccctcgcccgccg 394 ||||||||||| ||||||||||| |||||| Sbjct: 193 cctcgccgccggcgcctccctcggccgccg 164
>dbj|AK082539.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230060M08 product:similar to PROTEIN PHOSPHATASE 4 REGULATORY SUBUNIT 2 [Homo sapiens], full insert sequence Length = 3642 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 365 cctcgccgccgacgcctccctcgcccgccg 394 ||||||||||| ||||||||||| |||||| Sbjct: 233 cctcgccgccggcgcctccctcggccgccg 204
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccaccttc 226 |||||| |||||||||||||| |||||||| Sbjct: 22613654 gcctccaccgccgccgccgcccccaccttc 22613625 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 23786883 cctcccccgccgccgccgcc 23786902 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ccgccgccgcctccaccttc 226 |||||||||||||||||||| Sbjct: 11858302 ccgccgccgcctccaccttc 11858321 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 ccccgccgccgccgcctcca 221 |||||||||||||||||||| Sbjct: 4460911 ccccgccgccgccgcctcca 4460930 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 3900919 cctcccccgccgccgccgcc 3900938 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcctcc 220 |||||| ||||||||||||||||| Sbjct: 1307837 gcctccgccgccgccgccgcctcc 1307860
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 190 ggccggagcctcccccgccgccgccgcctc 219 ||||| ||||||| |||||||||||||||| Sbjct: 22882597 ggccgcagcctcctccgccgccgccgcctc 22882568 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctc 219 |||||||||||||||||||||| Sbjct: 9522833 cctcccccgccgccgccgcctc 9522854 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 359 cgcgctcctcgccgccgacgcc 380 |||||||||||||||||||||| Sbjct: 5079388 cgcgctcctcgccgccgacgcc 5079409 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 cagctcggggacctcgacgcc 353 ||||||||||||||||||||| Sbjct: 16019404 cagctcggggacctcgacgcc 16019384 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 202 ccccgccgccgccgcctccaccttc 226 ||||||||||||| ||||||||||| Sbjct: 13077415 ccccgccgccgcctcctccaccttc 13077391 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 cgccgccgccgcctccaccttcaccgccg 233 |||||||||||||||||||| | |||||| Sbjct: 2486640 cgccgccgccgcctccacctccgccgccg 2486668 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cgccgccgccgcctccacct 224 |||||||||||||||||||| Sbjct: 23044794 cgccgccgccgcctccacct 23044813 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 20481569 ccgccgccgccgcctccacc 20481588 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 17973604 ccgccgccgccgcctccacc 17973585 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctcc 220 |||||| ||||||||||||||||| Sbjct: 14178633 gcctcctccgccgccgccgcctcc 14178610 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctcc 220 |||||||||||||||||||| Sbjct: 10869515 cccccgccgccgccgcctcc 10869534 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cccccgccgccgccgcctcc 220 |||||||||||||||||||| Sbjct: 9485721 cccccgccgccgccgcctcc 9485702 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 8358140 cctcccccgccgccgccgcc 8358121 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 4958985 ccgccgccgccgcctccacc 4959004 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 4171210 ccgccgccgccgcctccacc 4171191 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacc 223 |||||||||||||||||||| Sbjct: 1124138 ccgccgccgccgcctccacc 1124157
>gb|AC009336.13|AC009336 Homo sapiens chromosome 2, clone RP11-387A1, complete sequence Length = 175667 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||| ||||| ||||||||| Sbjct: 64244 cccccgccgccgccgccaccaccaccaccgccgc 64277
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 193 cggagcctcccccgccgccgccgcctccaccttc 226 ||||||| || ||||||||||||||||| ||||| Sbjct: 93308 cggagccgccgccgccgccgccgcctcctccttc 93275
>ref|XM_216225.3| PREDICTED: Rattus norvegicus protein phosphatase 4, regulatory subunit 2 (predicted) (Ppp4r2_predicted), mRNA Length = 4878 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 365 cctcgccgccgacgcctccctcgcccgccg 394 ||||||||||| ||||||||||| |||||| Sbjct: 238 cctcgccgccggcgcctccctcggccgccg 209
>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0414D03 Length = 169823 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 192 ccggagcctcccccgccgccgccgcc 217 ||||||||||||| |||||||||||| Sbjct: 106076 ccggagcctccccagccgccgccgcc 106101
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctc 219 |||||||||||||||||||||| Sbjct: 136394 cctcccccgccgccgccgcctc 136415 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cccccgccgccgccgcctcc 220 |||||||||||||||||||| Sbjct: 99282 cccccgccgccgccgcctcc 99263
>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1616_B03 Length = 96081 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccaccttcaccg 230 |||||| ||||||||||||| ||||||| ||||| Sbjct: 71327 gcctccgccgccgccgccgcatccacctgcaccg 71294
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 ccccgccgccgccgcctccacc 223 |||||||||||||||||||||| Sbjct: 72711 ccccgccgccgccgcctccacc 72690
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 190 ggccggagcctcccccgccgccgccgcctc 219 ||||| ||||||| |||||||||||||||| Sbjct: 2399 ggccgcagcctcctccgccgccgccgcctc 2370
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 359 cgcgctcctcgccgccgacgcc 380 |||||||||||||||||||||| Sbjct: 39886 cgcgctcctcgccgccgacgcc 39907
>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0523A04 Length = 149049 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Plus Query: 201 cccccgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||| ||||| ||||||||| Sbjct: 78037 cccccgccgccgccgccgccaccgccaccgccgc 78070
>dbj|AP005779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0042J07 Length = 126938 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccacc 223 ||||| |||||||||||||||||||| Sbjct: 69250 cctccaccgccgccgccgcctccacc 69275
>dbj|AP003931.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1664_D08 Length = 128553 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccacc 223 ||||| |||||||||||||||||||| Sbjct: 40795 cctccaccgccgccgccgcctccacc 40820
>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0006O15 Length = 139723 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 190 ggccggagcctcccccgccgccgccgcctc 219 ||||| ||||||| |||||||||||||||| Sbjct: 115935 ggccgcagcctcctccgccgccgccgcctc 115906
>dbj|AK104057.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-E01, full insert sequence Length = 1512 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccacc 223 ||||| |||||||||||||||||||| Sbjct: 73 cctccaccgccgccgccgcctccacc 98
>dbj|AK100307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078G11, full insert sequence Length = 3443 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctc 219 |||||||||||||||||||||| Sbjct: 105 cctcccccgccgccgccgcctc 126
>dbj|AK071575.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102O13, full insert sequence Length = 1522 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcctccacc 223 ||||| |||||||||||||||||||| Sbjct: 74 cctccaccgccgccgccgcctccacc 99
>dbj|AK068694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162M01, full insert sequence Length = 3042 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccaccttc 226 |||||| |||||||||||||| |||||||| Sbjct: 152 gcctccaccgccgccgccgcccccaccttc 123
>dbj|AK068084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131N11, full insert sequence Length = 1626 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 ccccgccgccgccgcctccacc 223 |||||||||||||||||||||| Sbjct: 720 ccccgccgccgccgcctccacc 699
>dbj|AK066466.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065I19, full insert sequence Length = 3027 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcctccaccttcaccg 230 |||||| ||||||||||||| ||||||| ||||| Sbjct: 193 gcctccgccgccgccgccgcatccacctgcaccg 226
>dbj|AK063218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-E02, full insert sequence Length = 636 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 359 cgcgctcctcgccgccgacgcc 380 |||||||||||||||||||||| Sbjct: 322 cgcgctcctcgccgccgacgcc 301
>dbj|AK062643.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-D11, full insert sequence Length = 843 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 201 cccccgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||| ||||| ||||||||| Sbjct: 99 cccccgccgccgccgccgccaccgccaccgccgc 66
>emb|CT033751.4| Mouse DNA sequence from clone RP24-236O3 on chromosome 17, complete sequence Length = 171391 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 205 cgccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||||| ||||||||| Sbjct: 155949 cgccgccgccgcctccacccccaccgccgc 155920
>gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0049D13, complete sequence Length = 136942 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 204 ccgccgccgccgcctccaccttcaccgccg 233 ||||||||||||||||| ||||||| |||| Sbjct: 82754 ccgccgccgccgcctcccccttcacggccg 82725
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 197 gcctcccccgccgccgccgcctccaccttc 226 |||||| |||||||||||||| |||||||| Sbjct: 22923565 gcctccaccgccgccgccgcccccaccttc 22923536 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 24098552 cctcccccgccgccgccgcc 24098571 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ccgccgccgcctccaccttc 226 |||||||||||||||||||| Sbjct: 11936709 ccgccgccgcctccaccttc 11936728 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 ccccgccgccgccgcctcca 221 |||||||||||||||||||| Sbjct: 4469605 ccccgccgccgccgcctcca 4469624 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cctcccccgccgccgccgcc 217 |||||||||||||||||||| Sbjct: 3909613 cctcccccgccgccgccgcc 3909632 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 gcctcccccgccgccgccgcctcc 220 |||||| ||||||||||||||||| Sbjct: 1305558 gcctccgccgccgccgccgcctcc 1305581
>dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT13N17, TM0436b, complete sequence Length = 43428 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacctt 225 |||||||||||||||||||||| Sbjct: 18300 ccgccgccgccgcctccacctt 18321
>gb|AY383620.1| Gossypium hirsutum harpin binding protein 1 (HrBP1) mRNA, complete cds Length = 1064 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 ccgccgccgccgcctccacct 224 ||||||||||||||||||||| Sbjct: 243 ccgccgccgccgcctccacct 263
>gb|AY493292.1| Anas platyrhynchos microsatellite CAUD047 sequence Length = 338 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 199 ctcccccgccgccgccgcctccacc 223 ||||||||||||||||||| ||||| Sbjct: 187 ctcccccgccgccgccgccgccacc 211
>gb|BC076186.1| Danio rerio crystallin, beta B1, mRNA (cDNA clone MGC:92706 IMAGE:7075172), complete cds Length = 1082 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tctttcgccttttactaaaga 54 ||||||||||||||||||||| Sbjct: 34 tctttcgccttttactaaaga 54
>ref|XM_550136.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2134 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 206 gccgccgccgcctccaccttcaccgccgc 234 ||||||||||||||||||| | ||||||| Sbjct: 337 gccgccgccgcctccacctcccccgccgc 309
>ref|XM_483708.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1314 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 377 cgcctccctcgcccgccgcgccaccctct 405 |||||||| ||||||||||||| |||||| Sbjct: 108 cgcctcccccgcccgccgcgccgccctct 136
>ref|XM_507606.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011H15.39-1 mRNA Length = 1418 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 377 cgcctccctcgcccgccgcgccaccctct 405 |||||||| ||||||||||||| |||||| Sbjct: 75 cgcctcccccgcccgccgcgccgccctct 103
>ref|XM_507605.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011H15.39-1 mRNA Length = 1432 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 377 cgcctccctcgcccgccgcgccaccctct 405 |||||||| ||||||||||||| |||||| Sbjct: 46 cgcctcccccgcccgccgcgccgccctct 74
>ref|XM_507325.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011H15.39-1 mRNA Length = 1541 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 377 cgcctccctcgcccgccgcgccaccctct 405 |||||||| ||||||||||||| |||||| Sbjct: 75 cgcctcccccgcccgccgcgccgccctct 103
>ref|XM_480382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 198 cctcccccgccgccgccgcctccaccttcaccgccgc 234 ||||| |||||||| ||||| || ||||||||||||| Sbjct: 722 cctcctccgccgcctccgccgccgccttcaccgccgc 686
>ref|XM_465569.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3110 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 cagctcggggacctcgacgcc 353 ||||||||||||||||||||| Sbjct: 287 cagctcggggacctcgacgcc 307
>ref|XM_465285.1| Oryza sativa (japonica cultivar-group), mRNA Length = 363 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 202 ccccgccgccgccgcctccaccttc 226 ||||||||||||| ||||||||||| Sbjct: 215 ccccgccgccgcctcctccaccttc 191 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,901,216 Number of Sequences: 3902068 Number of extensions: 3901216 Number of successful extensions: 245026 Number of sequences better than 10.0: 1056 Number of HSP's better than 10.0 without gapping: 1123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 198609 Number of HSP's gapped (non-prelim): 44907 length of query: 406 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 384 effective length of database: 17,147,199,772 effective search space: 6584524712448 effective search space used: 6584524712448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
