ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast57d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103552.1| Zea mays PCO075057 mRNA sequence 64 2e-07
2emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4,... 62 7e-07
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 7e-07
4dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 7e-07
5dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 7e-07
6emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 56 4e-05
7emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 46 0.041
8ref|XM_463838.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.16
9ref|XM_463840.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.16
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
11dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
12dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.16
13dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.16
14dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
15dbj|AK109733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.16
16dbj|AB008519.1| Oryza sativa Nrt2 mRNA for high affinity nitrate... 44 0.16
17ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predic... 42 0.64
18emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 42 0.64
19emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4,... 42 0.64
20emb|AL583921.1|MLEPRTN5 Mycobacterium leprae strain TN complete ... 42 0.64
21emb|AL049478.1|MLCL458 Mycobacterium leprae cosmid L458 42 0.64
22gb|AE005856.1| Caulobacter crescentus CB15 section 182 of 359 of... 42 0.64
23gb|L78823.1|MSGB13GS Mycobacterium leprae cosmid B13 DNA sequence 42 0.64
24dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.64
25dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.64
26dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.64
27dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.64
28dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.64
29gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic m... 40 2.5
30gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 2.5
31emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin... 40 2.5
32gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple... 40 2.5
33emb|AJ277403.1|ECH277403 Erwinia chrysanthemi indA gene, indB ge... 40 2.5
34dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 2.5
35dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
36gb|AF268080.1|AF268080 Aeromonas salmonicida glycerophospholipid... 40 2.5
37dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
38emb|X70686.1|ASGCAT Aeromonas salmonicida satA gene 40 2.5
39dbj|AK110449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
40emb|X07279.1|AHGCAT Aeromonas hydrophila gene for phospholipid-c... 40 2.5
41dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, com... 40 2.5
42dbj|D21249.1|CXTCLPSL Closterium peracerosum-strigosum-littorale... 40 2.5
43gb|U78289.1|SFU78289 Streptomyces fradiae tylactone synthase, st... 40 2.5
44dbj|AB000908.1| Closterium peracerosum-strigosum-littorale compl... 40 2.5 
>gb|AY103552.1| Zea mays PCO075057 mRNA sequence
          Length = 1380

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 162 gcgccggcgtggcggcggcgagcaagttcgacgacgtggt 201
           ||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 155 gcgccggggtggcggcggcgaccaagttcgacgacgtggt 194
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>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13,
             complete sequence
          Length = 127135

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 48/53 (90%), Gaps = 3/53 (5%)
 Strand = Plus / Plus

                                                                  
Query: 152   gcggtggtgtg---cgccggcgtggcggcggcgagcaagttcgacgacgtggt 201
             |||||||||||   |||||| |||||||||||| |||||||||||||||||||
Sbjct: 75370 gcggtggtgtgcgccgccggtgtggcggcggcgggcaagttcgacgacgtggt 75422
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 48/53 (90%), Gaps = 3/53 (5%)
 Strand = Plus / Plus

                                                                     
Query: 152      gcggtggtgtg---cgccggcgtggcggcggcgagcaagttcgacgacgtggt 201
                |||||||||||   |||||| |||||||||||| |||||||||||||||||||
Sbjct: 32179681 gcggtggtgtgcgccgccggtgtggcggcggcgggcaagttcgacgacgtggt 32179733



 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 165      ccggcgtggcggcggcgagca 185
                |||||||||||||||||||||
Sbjct: 30508774 ccggcgtggcggcggcgagca 30508794
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>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full
           insert sequence
          Length = 1199

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 48/53 (90%), Gaps = 3/53 (5%)
 Strand = Plus / Plus

                                                                
Query: 152 gcggtggtgtg---cgccggcgtggcggcggcgagcaagttcgacgacgtggt 201
           |||||||||||   |||||| |||||||||||| |||||||||||||||||||
Sbjct: 83  gcggtggtgtgcgccgccggtgtggcggcggcgggcaagttcgacgacgtggt 135
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>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full
           insert sequence
          Length = 1279

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 48/53 (90%), Gaps = 3/53 (5%)
 Strand = Plus / Plus

                                                                
Query: 152 gcggtggtgtg---cgccggcgtggcggcggcgagcaagttcgacgacgtggt 201
           |||||||||||   |||||| |||||||||||| |||||||||||||||||||
Sbjct: 83  gcggtggtgtgcgccgccggtgtggcggcggcgggcaagttcgacgacgtggt 135
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>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete
             sequence
          Length = 62215

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 170   gtggcggcggcgagcaagttcgacgacgtggt 201
             |||||||||||| |||||||||||||||||||
Sbjct: 30875 gtggcggcggcgggcaagttcgacgacgtggt 30906
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>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 46.1 bits (23), Expect = 0.041
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 141    tcgccgtggccgcggtggtgtgc 163
              |||||||||||||||||||||||
Sbjct: 179251 tcgccgtggccgcggtggtgtgc 179229
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>ref|XM_463838.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1602

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 172 ggcggcggcgagcaagttcgac 193
           ||||||||||||||||||||||
Sbjct: 102 ggcggcggcgagcaagttcgac 123
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>ref|XM_463840.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1791

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 172 ggcggcggcgagcaagttcgac 193
           ||||||||||||||||||||||
Sbjct: 194 ggcggcggcgagcaagttcgac 215
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 172    ggcggcggcgagcaagttcgac 193
              ||||||||||||||||||||||
Sbjct: 668861 ggcggcggcgagcaagttcgac 668840



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 172    ggcggcggcgagcaagttcgac 193
              ||||||||||||||||||||||
Sbjct: 655521 ggcggcggcgagcaagttcgac 655542
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>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0501G04
          Length = 156603

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 172    ggcggcggcgagcaagttcgac 193
              ||||||||||||||||||||||
Sbjct: 146914 ggcggcggcgagcaagttcgac 146893



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 172    ggcggcggcgagcaagttcgac 193
              ||||||||||||||||||||||
Sbjct: 133574 ggcggcggcgagcaagttcgac 133595
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 162     gcgccggcgtggcggcggcgag 183
               ||||||||||||||||||||||
Sbjct: 5865418 gcgccggcgtggcggcggcgag 5865439
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 116    gtcgccctggtcgccgcggcgt 137
              ||||||||||||||||||||||
Sbjct: 423093 gtcgccctggtcgccgcggcgt 423114
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>dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1399_H05
          Length = 147670

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 172   ggcggcggcgagcaagttcgac 193
             ||||||||||||||||||||||
Sbjct: 25756 ggcggcggcgagcaagttcgac 25735



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 172   ggcggcggcgagcaagttcgac 193
             ||||||||||||||||||||||
Sbjct: 12416 ggcggcggcgagcaagttcgac 12437
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>dbj|AK109733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-C04, full
           insert sequence
          Length = 1791

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 172 ggcggcggcgagcaagttcgac 193
           ||||||||||||||||||||||
Sbjct: 194 ggcggcggcgagcaagttcgac 215
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>dbj|AB008519.1| Oryza sativa Nrt2 mRNA for high affinity nitrate transporter,
           complete cds
          Length = 1928

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 172 ggcggcggcgagcaagttcgac 193
           ||||||||||||||||||||||
Sbjct: 198 ggcggcggcgagcaagttcgac 219
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>ref|XM_473787.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 882

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 165 ccggcgtggcggcggcgagca 185
           |||||||||||||||||||||
Sbjct: 73  ccggcgtggcggcggcgagca 53
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>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 164    gccggcgtggcggcggcgagc 184
              |||||||||||||||||||||
Sbjct: 175946 gccggcgtggcggcggcgagc 175966
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>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
              complete sequence
          Length = 166804

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 165    ccggcgtggcggcggcgagca 185
              |||||||||||||||||||||
Sbjct: 142151 ccggcgtggcggcggcgagca 142171
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>emb|AL583921.1|MLEPRTN5 Mycobacterium leprae strain TN complete genome; segment 5/10
          Length = 332450

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 141   tcgccgtggccgcggtggtgt 161
             |||||||||||||||||||||
Sbjct: 66421 tcgccgtggccgcggtggtgt 66441
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>emb|AL049478.1|MLCL458 Mycobacterium leprae cosmid L458
          Length = 43839

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 141   tcgccgtggccgcggtggtgt 161
             |||||||||||||||||||||
Sbjct: 23155 tcgccgtggccgcggtggtgt 23175
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>gb|AE005856.1| Caulobacter crescentus CB15 section 182 of 359 of the complete genome
          Length = 12348

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 161  tgcgccggcgtggcggcggcg 181
            |||||||||||||||||||||
Sbjct: 4976 tgcgccggcgtggcggcggcg 4956
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>gb|L78823.1|MSGB13GS Mycobacterium leprae cosmid B13 DNA sequence
          Length = 42923

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 141   tcgccgtggccgcggtggtgt 161
             |||||||||||||||||||||
Sbjct: 28856 tcgccgtggccgcggtggtgt 28836
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 126      tcgccgcggcgtccctcgccgtggccgcg 154
                ||||| ||||| |||||||||||||||||
Sbjct: 20580110 tcgccacggcggccctcgccgtggccgcg 20580082
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>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1254_E07
          Length = 124028

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 126   tcgccgcggcgtccctcgccgtggccgcg 154
             ||||| ||||| |||||||||||||||||
Sbjct: 97757 tcgccacggcggccctcgccgtggccgcg 97729
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>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0515E01
          Length = 140063

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 126   tcgccgcggcgtccctcgccgtggccgcg 154
             ||||| ||||| |||||||||||||||||
Sbjct: 45768 tcgccacggcggccctcgccgtggccgcg 45740
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>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full
           insert sequence
          Length = 872

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 165 ccggcgtggcggcggcgagca 185
           |||||||||||||||||||||
Sbjct: 478 ccggcgtggcggcggcgagca 498
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>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full
           insert sequence
          Length = 1041

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 165 ccggcgtggcggcggcgagca 185
           |||||||||||||||||||||
Sbjct: 136 ccggcgtggcggcggcgagca 116
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>gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic monensin biosynthesis
            gene cluster, partial sequence
          Length = 103450

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 140  ctcgccgtggccgcggtggt 159
            ||||||||||||||||||||
Sbjct: 9339 ctcgccgtggccgcggtggt 9358
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     gcgccggcgtggcggcggcg 181
               ||||||||||||||||||||
Sbjct: 2232153 gcgccggcgtggcggcggcg 2232134
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>emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin gene cluster, strain
            DSM 40236
          Length = 90600

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  gccgcggtggtgtgcgccgg 168
            ||||||||||||||||||||
Sbjct: 5373 gccgcggtggtgtgcgccgg 5354
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>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   gccggcgtggcggcggcgag 183
             ||||||||||||||||||||
Sbjct: 67651 gccggcgtggcggcggcgag 67632
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>emb|AJ277403.1|ECH277403 Erwinia chrysanthemi indA gene, indB gene and indC gene
          Length = 7425

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 151 cgcggtggtgtgcgccggcg 170
           ||||||||||||||||||||
Sbjct: 933 cgcggtggtgtgcgccggcg 952
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 142     cgccgtggccgcggtggtgt 161
               ||||||||||||||||||||
Sbjct: 4302589 cgccgtggccgcggtggtgt 4302570
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      cgtcgccctggtcgccgcgg 134
                ||||||||||||||||||||
Sbjct: 10626618 cgtcgccctggtcgccgcgg 10626599
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>gb|AF268080.1|AF268080 Aeromonas salmonicida glycerophospholipid-cholesterol
           acyltransferase (gcaT) gene, complete cds
          Length = 1076

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  gcgggttgccggcgatggcg 103
           ||||||||||||||||||||
Sbjct: 878 gcgggttgccggcgatggcg 859
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>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1066D09
          Length = 183999

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    cgtcgccctggtcgccgcgg 134
              ||||||||||||||||||||
Sbjct: 163325 cgtcgccctggtcgccgcgg 163306
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>emb|X70686.1|ASGCAT Aeromonas salmonicida satA gene
          Length = 1176

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  gcgggttgccggcgatggcg 103
           ||||||||||||||||||||
Sbjct: 878 gcgggttgccggcgatggcg 859
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>dbj|AK110449.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-E04, full
           insert sequence
          Length = 2836

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgtcgccctggtcgccgcgg 134
           ||||||||||||||||||||
Sbjct: 973 cgtcgccctggtcgccgcgg 992
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>emb|X07279.1|AHGCAT Aeromonas hydrophila gene for phospholipid-cholesterol
            acyltransferase
          Length = 1368

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   gcgggttgccggcgatggcg 103
            ||||||||||||||||||||
Sbjct: 1076 gcgggttgccggcgatggcg 1057
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>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence
          Length = 106873

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   gccggcgtggcggcggcgag 183
             ||||||||||||||||||||
Sbjct: 58419 gccggcgtggcggcggcgag 58400
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>dbj|D21249.1|CXTCLPSL Closterium peracerosum-strigosum-littorale complex mRNA for 19 kDa
           subunit of protoplast-release-inducing protein, complete
           cds
          Length = 990

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 gcggcgtccctcgccgtggc 150
           ||||||||||||||||||||
Sbjct: 231 gcggcgtccctcgccgtggc 250
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>gb|U78289.1|SFU78289 Streptomyces fradiae tylactone synthase, starter module and modules
             1-7, (tylG) gene, complete cds
          Length = 43280

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   gcgtccctcgccgtggccgc 153
             ||||||||||||||||||||
Sbjct: 17105 gcgtccctcgccgtggccgc 17124
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>dbj|AB000908.1| Closterium peracerosum-strigosum-littorale complex gene for 19-kDa
            subunit of protoplast-release-inducing protein, complete
            cds
          Length = 1954

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  gcggcgtccctcgccgtggc 150
            ||||||||||||||||||||
Sbjct: 1066 gcggcgtccctcgccgtggc 1085


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,101,619
Number of Sequences: 3902068
Number of extensions: 1101619
Number of successful extensions: 101170
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99417
Number of HSP's gapped (non-prelim): 1753
length of query: 201
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 179
effective length of database: 17,147,199,772
effective search space: 3069348759188
effective search space used: 3069348759188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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