ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast57d08 |
|---|---|
| Clone Library Name | barley_pub |
>UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein (F-box only protein 1)| (AtFBX1) Length = 442 Score = 34.7 bits (78), Expect = 0.11 Identities = 15/29 (51%), Positives = 22/29 (75%) Frame = +2 Query: 344 QLHEDMLERVLARLPPASFFRLRGVCRRW 430 +L +L+RV+A LPP +FFR R VC+R+ Sbjct: 49 KLPPPLLDRVIAFLPPPAFFRTRCVCKRF 77
>DIA2_ASHGO (Q75A03) Protein DIA2| Length = 685 Score = 31.6 bits (70), Expect = 0.95 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +2 Query: 299 GKKRKCQELSAPELGQLHEDMLERVLARLPPASFFRLRGVCRRW 430 GKKR + + L +++ER++A + S R VC+ W Sbjct: 197 GKKRSSSKAKIDYIATLPVEIIERIMANMDTRSIIRCYSVCKLW 240
>FBX22_MOUSE (Q78JE5) F-box only protein 22| Length = 402 Score = 30.8 bits (68), Expect = 1.6 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = +2 Query: 296 GGKKRKCQELSAPELGQLHEDMLERVLARLPPASFFRLRGVCRRWSE 436 GG S L L E ++ERV LP + R+ GVCR W E Sbjct: 8 GGVSSSTDPRSTYVLSNLAE-VVERVFTFLPAKALLRVAGVCRLWRE 53
>AAT1_HUMAN (Q7Z4T9) AMY-1-associating protein expressed in testis 1 (AAT-1)| Length = 603 Score = 29.6 bits (65), Expect = 3.6 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -1 Query: 296 RSQPVPPPCPGSWSGQRRKHRE 231 +S PVPP W G + KHRE Sbjct: 92 KSDPVPPFISREWKGHKEKHRE 113
>CN065_HUMAN (Q8N9R9) Protein C14orf65| Length = 162 Score = 29.3 bits (64), Expect = 4.7 Identities = 11/37 (29%), Positives = 21/37 (56%) Frame = +3 Query: 165 RAADIKPATSLAPLVPVSSTPFLSVFSPLSAPRSWTW 275 R++ P ++++P PV + PFL P+ R ++W Sbjct: 124 RSSPSPPVSAMSPCHPVQAMPFLGSSCPMPEARPFSW 160
>TOP1_TREPA (O83409) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 731 Score = 28.9 bits (63), Expect = 6.2 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 6/39 (15%) Frame = -1 Query: 326 IALGTCASCRRSQPVP------PPCPGSWSGQRRKHREE 228 +A G CR +QPVP P C G+ G++ + R+E Sbjct: 609 LACGKFPECRNTQPVPLAKCPRPACDGNIVGKKTRGRKE 647
>AAT1_MACFA (Q95LR0) AMY-1-associating protein expressed in testis 1 (AAT-1)| Length = 603 Score = 28.9 bits (63), Expect = 6.2 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = -1 Query: 296 RSQPVPPPCPGSWSGQRRKHRE 231 +S PVPP W G KHRE Sbjct: 92 KSDPVPPFISRQWKGHEEKHRE 113
>EP84_HCMVA (P17151) Early phosphoprotein p84| Length = 684 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = -1 Query: 332 AQIALGTCASCRRSQPVPPPCP--GSWSGQRRKHREEGGGG 216 A A + +S S P+PPP P G G+ R + GGGG Sbjct: 563 ATAAAASNSSSSSSAPLPPPPPPSGGRRGRARNNTRGGGGG 603
>EC2_ARATH (Q42377) EC protein homolog 2| Length = 85 Score = 28.9 bits (63), Expect = 6.2 Identities = 17/47 (36%), Positives = 19/47 (40%) Frame = -1 Query: 308 ASCRRSQPVPPPCPGSWSGQRRKHREEGGGGNWH*RCE*GRRLYICG 168 ASC P PCPG S + + E GG H C G CG Sbjct: 11 ASCNDRCGCPSPCPGGESCRCKMMSEASGGDQEHNTCPCGEH---CG 54
>YABDL_ORYSA (Q76EJ0) Protein DROOPING LEAF| Length = 194 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -1 Query: 317 GTCASCRRSQPVPPPCPGSWSGQRR 243 G C CRR+QP+P P S G R Sbjct: 70 GPCTDCRRNQPLPLVSPTSNEGSPR 94
>ACY3_HUMAN (Q96HD9) Aspartoacylase-2 (EC 3.5.1.15) (Aminoacylase-3) (ACY-3)| (Acylase III) (Hepatitis C virus core-binding protein 1) (HCBP1) Length = 319 Score = 28.5 bits (62), Expect = 8.1 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Frame = +2 Query: 152 ASTHSGRRYKAGDLTRTASASFLH--PLPLCVFSSVRSKILDMAAALAASG 298 A+T RRY DL RT ++SFL+ P P + R++ L+ ASG Sbjct: 56 AATSGCRRYVDHDLNRTFTSSFLNSRPTPDDPYEVTRARELNQLLGPKASG 106
>VST2_HEVPA (P33426) Structural protein 2 precursor| Length = 660 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Frame = -1 Query: 284 VPPPCPGSWSGQRRKHREEG-GGGNW 210 +P P PG SG+RR R G GGG W Sbjct: 17 LPAPPPGQPSGRRRGRRSGGSGGGFW 42
>VST2_HEVMY (Q04611) Structural protein 2 precursor| Length = 660 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Frame = -1 Query: 284 VPPPCPGSWSGQRRKHREEG-GGGNW 210 +P P PG SG+RR R G GGG W Sbjct: 17 LPAPPPGQPSGRRRGRRSGGSGGGFW 42
>VST2_HEVBU (P29326) Structural protein 2 precursor| Length = 660 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Frame = -1 Query: 284 VPPPCPGSWSGQRRKHREEG-GGGNW 210 +P P PG SG+RR R G GGG W Sbjct: 17 LPAPPPGQPSGRRRGRRSGGSGGGFW 42
>KHSE_PYRAB (Q9UZV7) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)| Length = 294 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 3/29 (10%) Frame = -2 Query: 232 RKGVEET---GTSGASEVAGFISAARVSG 155 +KGV G+SGAS VAG ++AARV G Sbjct: 79 KKGVRPKSGLGSSGASSVAGALAAARVLG 107
>FBX22_PONPY (Q5RE08) F-box only protein 22| Length = 403 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 356 DMLERVLARLPPASFFRLRGVCRRWSE 436 +++ERVL LP + R+ VCR W E Sbjct: 28 EVVERVLTFLPAKALLRVACVCRLWRE 54
>FBX22_HUMAN (Q8NEZ5) F-box only protein 22 (F-box protein FBX22p44)| Length = 403 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 356 DMLERVLARLPPASFFRLRGVCRRWSE 436 +++ERVL LP + R+ VCR W E Sbjct: 28 EVVERVLTFLPAKALLRVACVCRLWRE 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,041,710 Number of Sequences: 219361 Number of extensions: 639408 Number of successful extensions: 2677 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2598 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2669 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
