ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast57d04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1990 Score = 343 bits (173), Expect = 3e-91 Identities = 242/265 (91%) Strand = Plus / Minus Query: 4 caatggcatcctggagtacaatgcccacagcttgtatggcttctcccaggccatcgccac 63 |||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||| || Sbjct: 1107 caatggcatcctggagtacaatgcgcacagcctgtatggattctcgcaggccatcgcgac 1048 Query: 64 tcacaaggggctgcaaagcatccaggggaagaggccgttcatcctgacgcgatccacgtt 123 ||| ||| |||||| | ||||||| ||| ||||||||||||||||||| || ||||| Sbjct: 1047 gcaccaggcgctgcaggggctccagggcaagcggccgttcatcctgacgcgctctacgtt 988 Query: 124 cgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacctgggagga 183 |||||| || |||||||||||||||||||||||||| |||| |||||||||||||||| | Sbjct: 987 cgtcgggtcgggcgcctacgccgcgcactggaccggcgacaacaagggcacctgggagaa 928 Query: 184 cctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 243 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 tctccgctactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 868 Query: 244 cgccgacatctgcgggttctacccg 268 ||||||||||||||||||||||||| Sbjct: 867 cgccgacatctgcgggttctacccg 843 Score = 226 bits (114), Expect = 5e-56 Identities = 175/194 (90%), Gaps = 1/194 (0%) Strand = Plus / Minus Query: 286 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 345 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 834 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 775 Query: 346 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 405 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 774 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 715 Query: 406 gcggaacgcgctcggcatgcggtacaggatgctcccgtacctgtacacgctc-actacca 464 ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 714 tcggaacgcgctcggcatgcggtacaggctgctcccttacctgtacacgctcaactacca 655 Query: 465 ggcgcacctcaccg 478 |||||| ||||||| Sbjct: 654 ggcgcatctcaccg 641
>ref|NM_184232.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3193 Score = 343 bits (173), Expect = 3e-91 Identities = 242/265 (91%) Strand = Plus / Plus Query: 4 caatggcatcctggagtacaatgcccacagcttgtatggcttctcccaggccatcgccac 63 |||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||| || Sbjct: 1801 caatggcatcctggagtacaatgcgcacagcctgtatggattctcgcaggccatcgcgac 1860 Query: 64 tcacaaggggctgcaaagcatccaggggaagaggccgttcatcctgacgcgatccacgtt 123 ||| ||| |||||| | ||||||| ||| ||||||||||||||||||| || ||||| Sbjct: 1861 gcaccaggcgctgcaggggctccagggcaagcggccgttcatcctgacgcgctctacgtt 1920 Query: 124 cgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacctgggagga 183 |||||| || |||||||||||||||||||||||||| |||| |||||||||||||||| | Sbjct: 1921 cgtcgggtcgggcgcctacgccgcgcactggaccggcgacaacaagggcacctgggagaa 1980 Query: 184 cctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 243 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1981 tctccgctactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 2040 Query: 244 cgccgacatctgcgggttctacccg 268 ||||||||||||||||||||||||| Sbjct: 2041 cgccgacatctgcgggttctacccg 2065 Score = 226 bits (114), Expect = 5e-56 Identities = 175/194 (90%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 286 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 345 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 2074 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 2133 Query: 346 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 405 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 2134 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 2193 Query: 406 gcggaacgcgctcggcatgcggtacaggatgctcccgtacctgtacacgctc-actacca 464 ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 2194 tcggaacgcgctcggcatgcggtacaggctgctcccttacctgtacacgctcaactacca 2253 Query: 465 ggcgcacctcaccg 478 |||||| ||||||| Sbjct: 2254 ggcgcatctcaccg 2267
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 343 bits (173), Expect = 3e-91 Identities = 242/265 (91%) Strand = Plus / Plus Query: 4 caatggcatcctggagtacaatgcccacagcttgtatggcttctcccaggccatcgccac 63 |||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||| || Sbjct: 1700406 caatggcatcctggagtacaatgcgcacagcctgtatggattctcgcaggccatcgcgac 1700465 Query: 64 tcacaaggggctgcaaagcatccaggggaagaggccgttcatcctgacgcgatccacgtt 123 ||| ||| |||||| | ||||||| ||| ||||||||||||||||||| || ||||| Sbjct: 1700466 gcaccaggcgctgcaggggctccagggcaagcggccgttcatcctgacgcgctctacgtt 1700525 Query: 124 cgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacctgggagga 183 |||||| || |||||||||||||||||||||||||| |||| |||||||||||||||| | Sbjct: 1700526 cgtcgggtcgggcgcctacgccgcgcactggaccggcgacaacaagggcacctgggagaa 1700585 Query: 184 cctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 243 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1700586 tctccgctactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 1700645 Query: 244 cgccgacatctgcgggttctacccg 268 ||||||||||||||||||||||||| Sbjct: 1700646 cgccgacatctgcgggttctacccg 1700670 Score = 226 bits (114), Expect = 5e-56 Identities = 175/194 (90%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 286 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 345 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 1700679 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 1700738 Query: 346 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 405 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 1700739 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 1700798 Query: 406 gcggaacgcgctcggcatgcggtacaggatgctcccgtacctgtacacgctc-actacca 464 ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 1700799 tcggaacgcgctcggcatgcggtacaggctgctcccttacctgtacacgctcaactacca 1700858 Query: 465 ggcgcacctcaccg 478 |||||| ||||||| Sbjct: 1700859 ggcgcatctcaccg 1700872
>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504H10 Length = 143515 Score = 343 bits (173), Expect = 3e-91 Identities = 242/265 (91%) Strand = Plus / Plus Query: 4 caatggcatcctggagtacaatgcccacagcttgtatggcttctcccaggccatcgccac 63 |||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||| || Sbjct: 42749 caatggcatcctggagtacaatgcgcacagcctgtatggattctcgcaggccatcgcgac 42808 Query: 64 tcacaaggggctgcaaagcatccaggggaagaggccgttcatcctgacgcgatccacgtt 123 ||| ||| |||||| | ||||||| ||| ||||||||||||||||||| || ||||| Sbjct: 42809 gcaccaggcgctgcaggggctccagggcaagcggccgttcatcctgacgcgctctacgtt 42868 Query: 124 cgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacctgggagga 183 |||||| || |||||||||||||||||||||||||| |||| |||||||||||||||| | Sbjct: 42869 cgtcgggtcgggcgcctacgccgcgcactggaccggcgacaacaagggcacctgggagaa 42928 Query: 184 cctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 243 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42929 tctccgctactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 42988 Query: 244 cgccgacatctgcgggttctacccg 268 ||||||||||||||||||||||||| Sbjct: 42989 cgccgacatctgcgggttctacccg 43013 Score = 226 bits (114), Expect = 5e-56 Identities = 175/194 (90%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 286 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 345 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 43022 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 43081 Query: 346 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 405 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 43082 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 43141 Query: 406 gcggaacgcgctcggcatgcggtacaggatgctcccgtacctgtacacgctc-actacca 464 ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 43142 tcggaacgcgctcggcatgcggtacaggctgctcccttacctgtacacgctcaactacca 43201 Query: 465 ggcgcacctcaccg 478 |||||| ||||||| Sbjct: 43202 ggcgcatctcaccg 43215
>dbj|AK110956.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A07, full insert sequence Length = 1990 Score = 343 bits (173), Expect = 3e-91 Identities = 242/265 (91%) Strand = Plus / Minus Query: 4 caatggcatcctggagtacaatgcccacagcttgtatggcttctcccaggccatcgccac 63 |||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||| || Sbjct: 1107 caatggcatcctggagtacaatgcgcacagcctgtatggattctcgcaggccatcgcgac 1048 Query: 64 tcacaaggggctgcaaagcatccaggggaagaggccgttcatcctgacgcgatccacgtt 123 ||| ||| |||||| | ||||||| ||| ||||||||||||||||||| || ||||| Sbjct: 1047 gcaccaggcgctgcaggggctccagggcaagcggccgttcatcctgacgcgctctacgtt 988 Query: 124 cgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacctgggagga 183 |||||| || |||||||||||||||||||||||||| |||| |||||||||||||||| | Sbjct: 987 cgtcgggtcgggcgcctacgccgcgcactggaccggcgacaacaagggcacctgggagaa 928 Query: 184 cctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 243 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 tctccgctactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 868 Query: 244 cgccgacatctgcgggttctacccg 268 ||||||||||||||||||||||||| Sbjct: 867 cgccgacatctgcgggttctacccg 843 Score = 226 bits (114), Expect = 5e-56 Identities = 175/194 (90%), Gaps = 1/194 (0%) Strand = Plus / Minus Query: 286 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 345 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 834 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 775 Query: 346 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 405 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 774 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 715 Query: 406 gcggaacgcgctcggcatgcggtacaggatgctcccgtacctgtacacgctc-actacca 464 ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 714 tcggaacgcgctcggcatgcggtacaggctgctcccttacctgtacacgctcaactacca 655 Query: 465 ggcgcacctcaccg 478 |||||| ||||||| Sbjct: 654 ggcgcatctcaccg 641
>dbj|AK102309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B18, full insert sequence Length = 3486 Score = 343 bits (173), Expect = 3e-91 Identities = 242/265 (91%) Strand = Plus / Plus Query: 4 caatggcatcctggagtacaatgcccacagcttgtatggcttctcccaggccatcgccac 63 |||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||| || Sbjct: 1802 caatggcatcctggagtacaatgcgcacagcctgtatggattctcgcaggccatcgcgac 1861 Query: 64 tcacaaggggctgcaaagcatccaggggaagaggccgttcatcctgacgcgatccacgtt 123 ||| ||| |||||| | ||||||| ||| ||||||||||||||||||| || ||||| Sbjct: 1862 gcaccaggcgctgcaggggctccagggcaagcggccgttcatcctgacgcgctctacgtt 1921 Query: 124 cgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacctgggagga 183 |||||| || |||||||||||||||||||||||||| |||| |||||||||||||||| | Sbjct: 1922 cgtcgggtcgggcgcctacgccgcgcactggaccggcgacaacaagggcacctgggagaa 1981 Query: 184 cctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 243 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1982 tctccgctactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 2041 Query: 244 cgccgacatctgcgggttctacccg 268 ||||||||||||||||||||||||| Sbjct: 2042 cgccgacatctgcgggttctacccg 2066 Score = 226 bits (114), Expect = 5e-56 Identities = 175/194 (90%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 286 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 345 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 2075 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 2134 Query: 346 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 405 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 2135 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 2194 Query: 406 gcggaacgcgctcggcatgcggtacaggatgctcccgtacctgtacacgctc-actacca 464 ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 2195 tcggaacgcgctcggcatgcggtacaggctgctcccttacctgtacacgctcaactacca 2254 Query: 465 ggcgcacctcaccg 478 |||||| ||||||| Sbjct: 2255 ggcgcatctcaccg 2268
>dbj|AK063966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A04, full insert sequence Length = 3193 Score = 343 bits (173), Expect = 3e-91 Identities = 242/265 (91%) Strand = Plus / Plus Query: 4 caatggcatcctggagtacaatgcccacagcttgtatggcttctcccaggccatcgccac 63 |||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||| || Sbjct: 1801 caatggcatcctggagtacaatgcgcacagcctgtatggattctcgcaggccatcgcgac 1860 Query: 64 tcacaaggggctgcaaagcatccaggggaagaggccgttcatcctgacgcgatccacgtt 123 ||| ||| |||||| | ||||||| ||| ||||||||||||||||||| || ||||| Sbjct: 1861 gcaccaggcgctgcaggggctccagggcaagcggccgttcatcctgacgcgctctacgtt 1920 Query: 124 cgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacctgggagga 183 |||||| || |||||||||||||||||||||||||| |||| |||||||||||||||| | Sbjct: 1921 cgtcgggtcgggcgcctacgccgcgcactggaccggcgacaacaagggcacctgggagaa 1980 Query: 184 cctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 243 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1981 tctccgctactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcgg 2040 Query: 244 cgccgacatctgcgggttctacccg 268 ||||||||||||||||||||||||| Sbjct: 2041 cgccgacatctgcgggttctacccg 2065 Score = 226 bits (114), Expect = 5e-56 Identities = 175/194 (90%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 286 ggaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 345 ||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 2074 ggaggagctctgcaaccggtggatcgagctcggcgcgttctacccgttctccagggacca 2133 Query: 346 cgccaacttcgcctcggcgaggcaggagctgtaccagtgggagtccgtggcgaggtcggc 405 ||||||||||| ||| |||||||||||||||| ||||||||||||||| | |||||| Sbjct: 2134 tgccaacttcgcgtcgccgaggcaggagctgtatgtgtgggagtccgtggccaagtcggc 2193 Query: 406 gcggaacgcgctcggcatgcggtacaggatgctcccgtacctgtacacgctc-actacca 464 ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 2194 tcggaacgcgctcggcatgcggtacaggctgctcccttacctgtacacgctcaactacca 2253 Query: 465 ggcgcacctcaccg 478 |||||| ||||||| Sbjct: 2254 ggcgcatctcaccg 2267
>gb|AY109891.1| Zea mays CL53767_1 mRNA sequence Length = 812 Score = 210 bits (106), Expect = 3e-51 Identities = 221/261 (84%) Strand = Plus / Plus Query: 8 ggcatcctggagtacaatgcccacagcttgtatggcttctcccaggccatcgccactcac 67 |||||||||||||||||||| ||||| ||||||||||||| |||||||| ||||| || Sbjct: 54 ggcatcctggagtacaatgcgcacagtctgtatggcttctcgcaggccattgccacgcat 113 Query: 68 aaggggctgcaaagcatccaggggaagaggccgttcatcctgacgcgatccacgttcgtc 127 | || ||||||| | | ||||||||||||||| |||||||||| || |||||||||||| Sbjct: 114 acggcgctgcaagggctgcaggggaagaggccggtcatcctgacccgctccacgttcgtc 173 Query: 128 ggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacctgggaggacctc 187 || || | || ||||||||||||||||| || | ||||||||| ||||| | ||| Sbjct: 174 gggtcnnnnncgtatgccgcgcactggaccggagataacaagggcacgtgggaaaatctc 233 Query: 188 cggtactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtcggcgcc 247 || ||||| ||||| |||||||||||||| ||||||||||||||||| ||||| ||| | Sbjct: 234 cgttactcgatctcaaccatgctcaactttggcatcttcggcatgcccatggttggctct 293 Query: 248 gacatctgcgggttctacccg 268 ||||||||||| ||||||||| Sbjct: 294 gacatctgcggtttctacccg 314 Score = 167 bits (84), Expect = 4e-38 Identities = 151/172 (87%), Gaps = 1/172 (0%) Strand = Plus / Plus Query: 303 ggtggatcgagctcggtgcattctacccgttctcaagggaccacgccaacttcgcctcgg 362 ||||||| |||||||| || |||||||| ||||| |||||||| ||||||||||| || Sbjct: 340 ggtggattgagctcggggccttctaccccttctccagggaccatgccaacttcgcgtcac 399 Query: 363 cgaggcaggagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggca 422 |||||||||||||||| ||||| |||||||||| ||| || |||||||||||||||| Sbjct: 400 cgaggcaggagctgtatgtctgggactccgtggcgaagtctgctcggaacgcgctcggca 459 Query: 423 tgcggtacaggatgctcccgtacctgtacacgctc-actaccaggcgcacct 473 ||||||||| | ||||||| ||||||||||||||| |||||||||||||||| Sbjct: 460 tgcggtacaagctgctcccctacctgtacacgctcaactaccaggcgcacct 511
>gb|BT019289.1| Zea mays clone Contig962.F mRNA sequence Length = 1946 Score = 109 bits (55), Expect = 9e-21 Identities = 121/143 (84%) Strand = Plus / Minus Query: 116 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacc 175 ||||||||||| || |||||| ||| |||||||||||||||| |||| | | ||| Sbjct: 1188 tccacgttcgtggggtccggccggtacaccgcgcactggaccggcgacaacgccgccacg 1129 Query: 176 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 235 ||||| |||||||| ||||||||| ||||||||||| ||||||| |||||||||| || Sbjct: 1128 tgggacgacctccgctactccatcaacaccatgctcagcttcggcctcttcggcattccc 1069 Query: 236 atggtcggcgccgacatctgcgg 258 ||||||||||| ||||||||||| Sbjct: 1068 atggtcggcgctgacatctgcgg 1046 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 287 gaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggacca 345 |||||||| ||||| || |||||| |||| || || |||||||||||| |||||||||| Sbjct: 1026 gaggagctctgcagccgctggatccagcttggcgcgttctacccgttcgcaagggacca 968
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 109 bits (55), Expect = 9e-21 Identities = 121/143 (84%) Strand = Plus / Minus Query: 116 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacc 175 ||||||||||||||||||||| ||| |||| ||||||||||| |||| | | || Sbjct: 27663077 tccacgttcgtcggctccggcaggtacaccgctcactggaccggcgacaacgccgcgacg 27663018 Query: 176 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 235 ||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||| || Sbjct: 27663017 tgggaggacctccactactccatcaacaccatgctcagcttcggcctcttcggcatcccc 27662958 Query: 236 atggtcggcgccgacatctgcgg 258 ||| ||||||||||||||||||| Sbjct: 27662957 atgatcggcgccgacatctgcgg 27662935 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 371 gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 430 |||||||||| ||||||||| ||||||||||||||| |||| ||||||||| |||| ||| Sbjct: 27662755 gagctgtacctgtgggagtcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 27662696 Query: 431 aggatgctcccgtacctgtacacgctca 458 || ||||||| ||| |||||||||||| Sbjct: 27662695 cggctgctcccctacttgtacacgctca 27662668 Score = 93.7 bits (47), Expect = 5e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 116 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacc 175 ||||||||||||||||||||| ||| |||||||||||||||| |||| | | || Sbjct: 27720960 tccacgttcgtcggctccggcaggtacaccgcgcactggaccggcgacaacttcgcgacg 27721019 Query: 176 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 235 ||||| |||||||| ||||||||| ||| ||||| | ||||||| |||||||||| || Sbjct: 27721020 tgggacgacctccgctactccatcaacactatgcttagcttcggcctcttcggcatcccc 27721079 Query: 236 atggtcggcgccgacatctgcgg 258 ||| |||| |||||||||||||| Sbjct: 27721080 atgatcggtgccgacatctgcgg 27721102 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 371 gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 430 |||||||||| |||||| || ||||||||||||||| |||| ||||||||| |||| ||| Sbjct: 27721282 gagctgtacctgtgggaatcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 27721341 Query: 431 aggatgctcccgtacctgtacacgctca 458 || ||||||| ||| |||||||||||| Sbjct: 27721342 cggctgctcccctacttgtacacgctca 27721369 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gagtccgtggcgaggtcggcg 406 ||||||||||||||||||||| Sbjct: 15172657 gagtccgtggcgaggtcggcg 15172677 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 ttctacccgttctcaagggaccac 346 |||||||||||||| ||||||||| Sbjct: 27721234 ttctacccgttctcgagggaccac 27721257 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gagtccgtggcgaggtcggc 405 |||||||||||||||||||| Sbjct: 15172601 gagtccgtggcgaggtcggc 15172620
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 109 bits (55), Expect = 9e-21 Identities = 121/143 (84%) Strand = Plus / Minus Query: 116 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacc 175 ||||||||||||||||||||| ||| |||| ||||||||||| |||| | | || Sbjct: 12332 tccacgttcgtcggctccggcaggtacaccgctcactggaccggcgacaacgccgcgacg 12273 Query: 176 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 235 ||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||| || Sbjct: 12272 tgggaggacctccactactccatcaacaccatgctcagcttcggcctcttcggcatcccc 12213 Query: 236 atggtcggcgccgacatctgcgg 258 ||| ||||||||||||||||||| Sbjct: 12212 atgatcggcgccgacatctgcgg 12190 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 371 gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 430 |||||||||| ||||||||| ||||||||||||||| |||| ||||||||| |||| ||| Sbjct: 12010 gagctgtacctgtgggagtcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 11951 Query: 431 aggatgctcccgtacctgtacacgctca 458 || ||||||| ||| |||||||||||| Sbjct: 11950 cggctgctcccctacttgtacacgctca 11923 Score = 93.7 bits (47), Expect = 5e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 116 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacc 175 ||||||||||||||||||||| ||| |||||||||||||||| |||| | | || Sbjct: 70215 tccacgttcgtcggctccggcaggtacaccgcgcactggaccggcgacaacttcgcgacg 70274 Query: 176 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 235 ||||| |||||||| ||||||||| ||| ||||| | ||||||| |||||||||| || Sbjct: 70275 tgggacgacctccgctactccatcaacactatgcttagcttcggcctcttcggcatcccc 70334 Query: 236 atggtcggcgccgacatctgcgg 258 ||| |||| |||||||||||||| Sbjct: 70335 atgatcggtgccgacatctgcgg 70357 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 371 gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 430 |||||||||| |||||| || ||||||||||||||| |||| ||||||||| |||| ||| Sbjct: 70537 gagctgtacctgtgggaatcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 70596 Query: 431 aggatgctcccgtacctgtacacgctca 458 || ||||||| ||| |||||||||||| Sbjct: 70597 cggctgctcccctacttgtacacgctca 70624 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 ttctacccgttctcaagggaccac 346 |||||||||||||| ||||||||| Sbjct: 70489 ttctacccgttctcgagggaccac 70512
>dbj|AK119824.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-D07, full insert sequence Length = 2829 Score = 109 bits (55), Expect = 9e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 116 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacc 175 ||||||||||||||||||||| ||| |||| ||||||||||| |||| | | || Sbjct: 1654 tccacgttcgtcggctccggcaggtacaccgctcactggaccggcgacaacgccgcgacg 1713 Query: 176 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 235 ||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||| || Sbjct: 1714 tgggaggacctccactactccatcaacaccatgctcagcttcggcctcttcggcatcccc 1773 Query: 236 atggtcggcgccgacatctgcgg 258 ||| ||||||||||||||||||| Sbjct: 1774 atgatcggcgccgacatctgcgg 1796 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 371 gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 430 |||||||||| ||||||||| ||||||||||||||| |||| ||||||||| |||| ||| Sbjct: 1900 gagctgtacctgtgggagtcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 1959 Query: 431 aggatgctcccgtacctgtacacgctca 458 || ||||||| ||| |||||||||||| Sbjct: 1960 cggctgctcccctacttgtacacgctca 1987 Score = 40.1 bits (20), Expect = 6.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 287 gaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaaggga 342 |||||||| ||||| || ||||| |||| || || |||||||||||||| ||||| Sbjct: 1816 gaggagctctgcagccgctggattcagcttggcgcgttctacccgttctcgaggga 1871
>gb|AF448201.1| Pinus pinaster putative alpha-xylosidase (XYL1) mRNA, complete cds Length = 2881 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 146 gcgcactggaccggtgacagcaagggcacctgggaggacctccggtactccatctccacc 205 ||||||||||| || |||| ||| | ||| |||||||| ||||| ||||| ||||| ||| Sbjct: 1666 gcgcactggacgggagacaacaaagccacttgggaggatctccgctactcaatctcgacc 1725 Query: 206 atgctcaacttcggcatcttcggcatgccgatggtcggcgccgacatctgcgggttcta 264 || |||||||||||||| ||||| ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 1726 atactcaacttcggcatgttcgggatgcccatggtgggcgctgacatctgcggcttcta 1784 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 12 tcctggagtacaatgcccacagcttgtatggcttctcccaggccatcgccactcacaagg 71 |||| |||||| | ||||||||| | |||||||| || |||||||||||||| ||||||| Sbjct: 1532 tcctcgagtacgacgcccacagcctctatggcttatcgcaggccatcgccacgcacaagg 1591
>gb|U22450.1|HVU22450 Hordeum vulgare alpha-glucosidase mRNA, complete cds Length = 2738 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 182 gacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccgatggtc 241 ||||| || ||||||||| ||||||||||| ||||||| ||||||||||||| ||| || Sbjct: 1662 gacctgcgctactccatcaacaccatgctcagcttcggcctcttcggcatgcccatgatc 1721 Query: 242 ggcgccgacatctgcgggttc 262 ||||||||||||||||||||| Sbjct: 1722 ggcgccgacatctgcgggttc 1742 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 287 gaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggaccac 346 |||||||| ||| ||||||||||| ||||||| || |||||||| ||||| ||||||||| Sbjct: 1758 gaggagctctgcggtcggtggatccagctcggagccttctaccccttctcgagggaccac 1817
>gb|AF118226.1|AF118226 Hordeum vulgare high pI alpha-glucosidase (AGL97) gene, complete cds Length = 7113 Score = 93.7 bits (47), Expect = 5e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 116 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacc 175 ||||| ||||||||||||||| ||| |||| |||||||| || |||| | | ||| Sbjct: 6037 tccaccttcgtcggctccggccggtacaccgctcactggactggcgacaacgccgccacg 6096 Query: 176 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 235 |||| ||||| || ||||||||| ||||||||||| ||||||| ||||||||||||| Sbjct: 6097 tggggcgacctgcgctactccatcaacaccatgctcagcttcggcctcttcggcatgccc 6156 Query: 236 atggtcggcgccgacatctgcgg 258 ||| ||||||||||||||||||| Sbjct: 6157 atgatcggcgccgacatctgcgg 6179 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 287 gaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggaccac 346 |||||||| ||| ||||||||||| ||||||| || |||||||| ||||| ||||||||| Sbjct: 6199 gaggagctctgcggtcggtggatccagctcggcgccttctaccccttctcgagggaccac 6258
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 93.7 bits (47), Expect = 5e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 116 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacc 175 ||||||||||||||||||||| ||| |||||||||||||||| |||| | | || Sbjct: 23469 tccacgttcgtcggctccggcaggtacaccgcgcactggaccggcgacaacttcgcgacg 23528 Query: 176 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 235 ||||| |||||||| ||||||||| ||| ||||| | ||||||| |||||||||| || Sbjct: 23529 tgggacgacctccgctactccatcaacactatgcttagcttcggcctcttcggcatcccc 23588 Query: 236 atggtcggcgccgacatctgcgg 258 ||| |||| |||||||||||||| Sbjct: 23589 atgatcggtgccgacatctgcgg 23611 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 371 gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 430 |||||||||| |||||| || ||||||||||||||| |||| ||||||||| |||| ||| Sbjct: 23791 gagctgtacctgtgggaatcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 23850 Query: 431 aggatgctcccgtacctgtacacgctca 458 || ||||||| ||| |||||||||||| Sbjct: 23851 cggctgctcccctacttgtacacgctca 23878 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 ttctacccgttctcaagggaccac 346 |||||||||||||| ||||||||| Sbjct: 23743 ttctacccgttctcgagggaccac 23766
>dbj|AK121588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037N10, full insert sequence Length = 2804 Score = 93.7 bits (47), Expect = 5e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 116 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacc 175 ||||||||||||||||||||| ||| |||||||||||||||| |||| | | || Sbjct: 1632 tccacgttcgtcggctccggcaggtacaccgcgcactggaccggcgacaacttcgcgacg 1691 Query: 176 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 235 ||||| |||||||| ||||||||| ||| ||||| | ||||||| |||||||||| || Sbjct: 1692 tgggacgacctccgctactccatcaacactatgcttagcttcggcctcttcggcatcccc 1751 Query: 236 atggtcggcgccgacatctgcgg 258 ||| |||| |||||||||||||| Sbjct: 1752 atgatcggtgccgacatctgcgg 1774 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 371 gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 430 |||||||||| |||||| || ||||||||||||||| |||| ||||||||| |||| ||| Sbjct: 1878 gagctgtacctgtgggaatcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 1937 Query: 431 aggatgctcccgtacctgtacacgctca 458 || ||||||| ||| |||||||||||| Sbjct: 1938 cggctgctcccctacttgtacacgctca 1965 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Plus Query: 287 gaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggaccac 346 |||||||| ||||| || ||||| |||| || || |||||||||||||| ||||||||| Sbjct: 1794 gaggagctctgcagccgatggattcagcttggcgcgttctacccgttctcgagggaccac 1853
>dbj|AK105449.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B12, full insert sequence Length = 2873 Score = 93.7 bits (47), Expect = 5e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 116 tccacgttcgtcggctccggcgcctacgccgcgcactggaccggtgacagcaagggcacc 175 ||||||||||||||||||||| ||| |||||||||||||||| |||| | | || Sbjct: 1700 tccacgttcgtcggctccggcaggtacaccgcgcactggaccggcgacaacttcgcgacg 1759 Query: 176 tgggaggacctccggtactccatctccaccatgctcaacttcggcatcttcggcatgccg 235 ||||| |||||||| ||||||||| ||| ||||| | ||||||| |||||||||| || Sbjct: 1760 tgggacgacctccgctactccatcaacactatgcttagcttcggcctcttcggcatcccc 1819 Query: 236 atggtcggcgccgacatctgcgg 258 ||| |||| |||||||||||||| Sbjct: 1820 atgatcggtgccgacatctgcgg 1842 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 371 gagctgtaccagtgggagtccgtggcgaggtcggcgcggaacgcgctcggcatgcggtac 430 |||||||||| |||||| || ||||||||||||||| |||| ||||||||| |||| ||| Sbjct: 1946 gagctgtacctgtgggaatcggtggcgaggtcggcgaggaaggcgctcggcctgcgctac 2005 Query: 431 aggatgctcccgtacctgtacacgctca 458 || ||||||| ||| |||||||||||| Sbjct: 2006 cggctgctcccctacttgtacacgctca 2033 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Plus Query: 287 gaggagctgtgcagtcggtggatcgagctcggtgcattctacccgttctcaagggaccac 346 |||||||| ||||| || ||||| |||| || || |||||||||||||| ||||||||| Sbjct: 1862 gaggagctctgcagccgatggattcagcttggcgcgttctacccgttctcgagggaccac 1921
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 229 catgccgatggtcggcgccgaca 251 ||||||||||||||||||||||| Sbjct: 901388 catgccgatggtcggcgccgaca 901410
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 348 ccaacttcgcctcggcgaggca 369 |||||||||||||||||||||| Sbjct: 11607369 ccaacttcgcctcggcgaggca 11607390
>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1120F06 Length = 186712 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 348 ccaacttcgcctcggcgaggca 369 |||||||||||||||||||||| Sbjct: 171027 ccaacttcgcctcggcgaggca 171048
>dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1272H04 Length = 87113 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 348 ccaacttcgcctcggcgaggca 369 |||||||||||||||||||||| Sbjct: 52741 ccaacttcgcctcggcgaggca 52762
>dbj|AK121178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083G22, full insert sequence Length = 3866 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 348 ccaacttcgcctcggcgaggca 369 |||||||||||||||||||||| Sbjct: 109 ccaacttcgcctcggcgaggca 130
>dbj|AK073416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040D17, full insert sequence Length = 3852 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 348 ccaacttcgcctcggcgaggca 369 |||||||||||||||||||||| Sbjct: 109 ccaacttcgcctcggcgaggca 130
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 caggcgcacctcaccgcgctc 483 ||||||||||||||||||||| Sbjct: 197866 caggcgcacctcaccgcgctc 197846
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gagtccgtggcgaggtcggcg 406 ||||||||||||||||||||| Sbjct: 2141142 gagtccgtggcgaggtcggcg 2141162
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 127 cggctccggcgcctacgccgcgcac 151 |||| |||||||||||||||||||| Sbjct: 2564269 cggcgccggcgcctacgccgcgcac 2564245 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ccgccgctggaggagctgtg 297 |||||||||||||||||||| Sbjct: 3359149 ccgccgctggaggagctgtg 3359168
>dbj|AP005763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015G09 Length = 140893 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gagtccgtggcgaggtcggcg 406 ||||||||||||||||||||| Sbjct: 47171 gagtccgtggcgaggtcggcg 47191 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gagtccgtggcgaggtcggc 405 |||||||||||||||||||| Sbjct: 47115 gagtccgtggcgaggtcggc 47134
>dbj|AP005910.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0034G14 Length = 154120 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gagtccgtggcgaggtcggcg 406 ||||||||||||||||||||| Sbjct: 151977 gagtccgtggcgaggtcggcg 151997 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gagtccgtggcgaggtcggc 405 |||||||||||||||||||| Sbjct: 151921 gagtccgtggcgaggtcggc 151940
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 gcttctcccaggccatcgcca 62 ||||||||||||||||||||| Sbjct: 567456 gcttctcccaggccatcgcca 567476
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gagtccgtggcgaggtcggcg 406 ||||||||||||||||||||| Sbjct: 2141086 gagtccgtggcgaggtcggcg 2141106
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132703 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gagtccgtggcgaggtcggcg 406 ||||||||||||||||||||| Sbjct: 23366 gagtccgtggcgaggtcggcg 23386
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 cttcggcatgccgatggtcg 242 |||||||||||||||||||| Sbjct: 1947843 cttcggcatgccgatggtcg 1947824
>gb|AY532606.1| Rock bream iridovirus strain RBIV-KOR-TY1 from South Korea, complete genome Length = 112080 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cggccaagccaccgccgctg 286 |||||||||||||||||||| Sbjct: 82016 cggccaagccaccgccgctg 81997
>ref|XM_362264.1| Magnaporthe grisea 70-15 hypothetical protein (MG04709.4) partial cds Length = 4515 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gctcaacttcggcatcttcg 227 |||||||||||||||||||| Sbjct: 2740 gctcaacttcggcatcttcg 2721
>ref|XM_451809.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B06116g predicted mRNA Length = 3156 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ctcaacttcggcatcttcgg 228 |||||||||||||||||||| Sbjct: 2139 ctcaacttcggcatcttcgg 2158
>gb|AY894343.1| Orange-spotted grouper iridovirus, complete genome Length = 112636 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cggccaagccaccgccgctg 286 |||||||||||||||||||| Sbjct: 82396 cggccaagccaccgccgctg 82377
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ctcaacttcggcatcttcgg 228 |||||||||||||||||||| Sbjct: 545157 ctcaacttcggcatcttcgg 545176
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 tcggcatcttcggcatgccg 235 |||||||||||||||||||| Sbjct: 64739 tcggcatcttcggcatgccg 64758
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cggctccggcgcctacgccg 146 |||||||||||||||||||| Sbjct: 5029558 cggctccggcgcctacgccg 5029577
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ggcgcctacgccgcgcactggacc 157 ||||||| |||||||||||||||| Sbjct: 7625633 ggcgcctgcgccgcgcactggacc 7625610
>emb|Y00407.1|GGCALB Chicken conalbumin (ovotransferrin) gene and flanking regions Length = 11068 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gggcacctgggaggacctcc 188 |||||||||||||||||||| Sbjct: 1519 gggcacctgggaggacctcc 1500 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,804,302 Number of Sequences: 3902068 Number of extensions: 2804302 Number of successful extensions: 57703 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56946 Number of HSP's gapped (non-prelim): 746 length of query: 492 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 470 effective length of database: 17,147,199,772 effective search space: 8059183892840 effective search space used: 8059183892840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
