>UNG_HHV11 (P10186) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 334

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 4/126 (3%)
 Frame = +1

Query: 67  PRRSRAAPAGTVRRGGSPPVRLQ----QVAVSGISSAKPRQGIARRPQAAHSEGWAVEGA 234
           PRR  ++P  T  R G+PP +          S  +S + R G    P A  S G A   A
Sbjct: 11  PRRRPSSPRRTPPRDGTPPQKADADDPTPGASNDASTETRPGSGGEPAACRSSGPAALLA 70

Query: 235 S*TVAATAGLVYAAGLVHPIVPARWLHNARNGGAATTHPQREPQARNAALVPTAIPGLLA 414
           +   A  AG+ +++    P  P   L N     AAT+ P      R   L+  A   L+ 
Sbjct: 71  A-LEAGPAGVTFSSSA--PPDPPMDLTNGGVSPAATSAPLDWTTFRRVFLIDDAWRPLME 127

Query: 415 SVVRQP 432
             +  P
Sbjct: 128 PELANP 133

>CNR1B_FUGRU (Q98895) Cannabinoid receptor type 1B|
          Length = 470

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 73  RSRAAPAGTVRR-GGSPPVRLQQVAVSGISSAKPRQGI 183
           RS    AG  R  GG P V++ QV VSG++++ P + +
Sbjct: 433 RSTGGRAGKDRSVGGKPQVKVAQVTVSGVTASSPAEAV 470

>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
 Frame = +1

Query: 43   GGRQVELHPRRSRAAPAGTVRRGGSPPVR-------LQQVAVSGISSAKPRQGIARRPQA 201
            GG QV   P   R++P G ++     P R       L+ V     S+++P +   RRP A
Sbjct: 1657 GGSQVSSGPCSQRSSPDGGLKGSAEGPPRRPGGPSPLKAVPGESSSASEPSEPHRRRPPA 1716

Query: 202  AH 207
            +H
Sbjct: 1717 SH 1718



 Score = 29.3 bits (64), Expect = 5.2
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = -1

Query: 158  LMPDTATCCSRTGGLPPRRTVPAGAARERRGCSSTCRPPSPRRIPA 21
            L  D       T G PP  T+PA         ++   PP PRR  A
Sbjct: 1260 LKQDRENAARGTDGKPPPLTLPASTPAPTETLATVAAPPPPRRTAA 1305

>DAPB_PSEAE (P38103) Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR)|
          Length = 268

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
 Frame = +1

Query: 55  VELHPRRSRAAPAGTVRRGGSPPVR-----LQQVAV---SGISSAKPRQGIARRPQAA-- 204
           +E H R    AP+GT  R G    +     LQ+VAV    G + A+ R+ I      A  
Sbjct: 153 IEAHHRHKVDAPSGTALRMGEVVAQALGRDLQEVAVYGREGQTGARARETIGFATVRAGD 212

Query: 205 ----HSEGWAVEG--AS*TVAATAGLVYAAGLVHPIVPARWLHNARNG 330
               H+  +A EG     T  A++ + +A G V     A WL    NG
Sbjct: 213 VVGDHTVLFAAEGERVEITHKASSRMTFARGAVR---AALWLEGKENG 257

>IF2_BRAJA (Q89WA9) Translation initiation factor IF-2|
          Length = 902

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +1

Query: 31  RRGDGGRQVELHPRRSRAAPAGTVRRGGSPPVRLQQVAV-SGISSAKPRQGIARRPQAAH 207
           +R   G Q     R + AAPA    R G+P  R        G ++A+P    A+RP A  
Sbjct: 170 KRFGEGEQPASAARPATAAPAAPAPRPGAPAARPGTTTTRPGTTTARPATTTAQRPGAPA 229

Query: 208 SEGWAV 225
             G AV
Sbjct: 230 GRGPAV 235

>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB|
          Length = 142

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
 Frame = -1

Query: 233 APSTAHPSEWAACGLRAIPCLGLALLMPDTATCCSRTGGLPPRRTVPAGAARERRGCS-- 60
           AP TA  + +     +A PC   A     T +    +G    RR+  +G +R  R CS  
Sbjct: 57  APKTAMTTVFIVMQRKAAPCSRKA----STGSPARSSGS--SRRSRSSGCSRSSRSCSCW 110

Query: 59  -----STCRPPSPR 33
                S C PP+PR
Sbjct: 111 RSPCGSRCAPPAPR 124

>CUA1_DROME (Q26416) Adult cuticle protein 1 precursor (dACP-1)|
          Length = 135

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +1

Query: 82  AAPAGTVRRGGSPPVRLQQVAVSGISSAKPRQGIARRPQAAHSEGWA 222
           AAPA  V    +P V +  VA SG+ +A+ R  I   P A H +  A
Sbjct: 78  AAPAPAVVAAHAPSVVVAPVAHSGVYTAQTRGAIHTAPLAGHIQSVA 124

>Y2075_MYCTU (Q10683) Hypothetical protein Rv2075c/MT2135|
          Length = 487

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 24/78 (30%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
 Frame = -1

Query: 320 ALWSHRAGTMGWTXXXXXXXXXXXXXVYDAPSTAHPSEWAACGLR---AIPCLGLALLMP 150
           A W   A  MG                Y  P  A PS  A+C +    AIPC+ L     
Sbjct: 4   ARWLQSAALMGALAVVLITAAPVAADAYQVP--APPSPTASCDVISPVAIPCVALGKFAD 61

Query: 149 DTATCCSRTGGLPPRRTV 96
             A  C R  G+P  R V
Sbjct: 62  AVAAECRRV-GVPDARCV 78

>MTC1_COREQ (P42828) Modification methylase CeqI (EC 2.1.1.72)|
           (Adenine-specific methyltransferase CeqI) (M.CeqI)
          Length = 517

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +1

Query: 67  PRRSRAAPAGTVRRGGSPPVRLQQVAVSGISSAKPRQGIARRPQAAHSEGWAVE 228
           PR SR +  G +   G P     +  V G +SA+PR+G A   ++    GW V+
Sbjct: 20  PRLSRRS--GCLEVPGRPRRPFLRPTVPGPTSARPRRGRAPHGRSTRCTGWRVQ 71

>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)|
          Length = 926

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 34/119 (28%), Positives = 46/119 (38%)
 Frame = +1

Query: 82   AAPAGTVRRGGSPPVRLQQVAVSGISSAKPRQGIARRPQAAHSEGWAVEGAS*TVAATAG 261
            +AP        +P   +   A +  ++A     I     AA     A   A    AAT  
Sbjct: 661  SAPMAGPVAAAAPAAAINATAATNTATAATNTTIM---VAAAPVAVAAVAAPAAAAATPS 717

Query: 262  LVYAAGLVHPIVPARWLHNARNGGAATTHPQREPQARNAALVPTAIPGLLASVVRQPAA 438
               AA L     PA  +  A +  AA +     P A  AA+VP A P   A+ V+ PAA
Sbjct: 718  PANAAALAAAAAPATSVSAATSVSAANSISPAAPVAP-AAVVPPAAPVSPAAAVQIPAA 775

>ST17A_HUMAN (Q9UEE5) Serine/threonine-protein kinase 17A (EC 2.7.11.1) (DAP|
           kinase-related apoptosis-inducing protein kinase 1)
          Length = 414

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 125 TGGLPPRRTVPAGAARERRGCSSTCRPPSP 36
           +GG  P  T  +G+ R  RG S  CRPP P
Sbjct: 9   SGGSSPGAT--SGSGRAGRGLSGPCRPPPP 36

>KEFF_SALTY (Q8ZRW3) Glutathione-regulated potassium-efflux system ancillary|
           protein kefF
          Length = 176

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 386 TRAALRAWGSRCGWVVAAPPFLALWSHRAGTMGW 285
           +RA+L  W     W  + PP L LW  +  T GW
Sbjct: 54  SRASLIVWQHPMQWY-SVPPLLKLWMDKVLTHGW 86

>KEFF_SALTI (Q8Z9K1) Glutathione-regulated potassium-efflux system ancillary|
           protein kefF
          Length = 176

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 386 TRAALRAWGSRCGWVVAAPPFLALWSHRAGTMGW 285
           +RA+L  W     W  + PP L LW  +  T GW
Sbjct: 54  SRASLIVWQHPMQWY-SVPPLLKLWMDKVLTHGW 86

>POLG_DEN2D (P30026) Genome polyprotein [Contains: Capsid protein C (Core|
           protein); Envelope protein M (Matrix protein); Major
           envelope protein E; Nonstructural protein 1 (NS1)]
           (Fragment)
          Length = 1127

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 14/74 (18%)
 Frame = -1

Query: 461 WLTVKTRTAAGCRTTEARS----PGMAVGTRAALRAWGSRCG----------WVVAAPPF 324
           W+T  TRT  G    E RS    P + +G       W S  G          W++  P F
Sbjct: 188 WVTYGTRTTTGEHGREKRSVALVPHVGMGLETGTETWMSSDGAWKRACRMETWILRHPGF 247

Query: 323 LALWSHRAGTMGWT 282
             + +  A T+G T
Sbjct: 248 TIMAAILAYTIGTT 261

>H12_MOUSE (P15864) Histone H1.2 (H1 VAR.1) (H1c)|
          Length = 211

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = +1

Query: 58  ELHPRRSRAA--PAGTVRRGGSPPVRLQQVAVSGISSAKPRQGI--ARRPQAAHSEGWAV 225
           E  P + +AA  PAG  R+   PPV   ++    ++++K R G+  A   +A  + G+ V
Sbjct: 15  EKAPAKKKAAKKPAGVRRKASGPPV--SELITKAVAASKERSGVSLAALKKALAAAGYDV 72

Query: 226 E 228
           E
Sbjct: 73  E 73

>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 4/146 (2%)
 Frame = +1

Query: 37  GDGGRQVELHPRRSRAAPAGTVRRGGSPPVRLQQVAVSGISSAK----PRQGIARRPQAA 204
           GDGG   +  PRR RA   G +RRG          + S +S A+    PR   A   ++A
Sbjct: 320 GDGGAPPQRQPRRRRAG-EGALRRGRGFSSSSSSGSDSDLSPARSPSAPRAPAAAARRSA 378

Query: 205 HSEGWAVEGAS*TVAATAGLVYAAGLVHPIVPARWLHNARNGGAATTHPQREPQARNAAL 384
            S   +   +S + ++++        V P  P        +  A    P+  P A +A+ 
Sbjct: 379 SSSSSSSSSSSSSSSSSSSEGEEDEGVRPGAPLARAGPPPSPPAPAAAPR--PSASSASS 436

Query: 385 VPTAIPGLLASVVRQPAAVRVFTVSH 462
              A P       R P   R  T +H
Sbjct: 437 SAAASPAPAPEPARPPRRKRRSTNNH 462

>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +1

Query: 40  DGGRQVELHPRRSRAAPAGTVRRGGSPPVRLQQVAVSGISSAKPRQGIARRPQAAHSEG 216
           D G Q+         A  GT+RRGG  P +  + +  G+  A   QGIA +P    + G
Sbjct: 9   DHGVQIRFITEPVSGAEMGTLRRGGRRPAKDARASTYGV--AVRVQGIAGQPFVVLNSG 65

>H1_LYCES (P37218) Histone H1|
          Length = 287

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 25/119 (21%), Positives = 44/119 (36%)
 Frame = +1

Query: 70  RRSRAAPAGTVRRGGSPPVRLQQVAVSGISSAKPRQGIARRPQAAHSEGWAVEGAS*TVA 249
           + S   P+G+     + P + +  A     +AKP+  +  + + A     A +      A
Sbjct: 117 KNSYKLPSGSKPAAAAVPAKKKPAAAKSKPAAKPKAAVKPKAKPAAKAKPAAKAKPAAKA 176

Query: 250 ATAGLVYAAGLVHPIVPARWLHNARNGGAATTHPQREPQARNAALVPTAIPGLLASVVR 426
             A     A    P   A+ +  A+   AA   P+       AA+ P A P    + V+
Sbjct: 177 KPAAKAKPAAKAKPAAKAKPVAKAKPKAAAAAKPK-------AAVKPKAAPAKTKAAVK 228

>FOXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related protein FKHL1)|
           (Transcription factor BF-1) (Brain factor 1) (BF1)
           (HFK1)
          Length = 477

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
 Frame = -1

Query: 197 CGLRAIPCLGLALLMPDTATCCSRTGGL------PPRRTVPAGAARERRGCSSTCRPPSP 36
           CGL ++PC G   L P +    +            P  T  +  +   R  SS+  PP+P
Sbjct: 378 CGL-SVPCSGTYSLNPCSVNLLAGQTSYFFPHVPHPSMTSQSSTSMSARAASSSTSPPAP 436

Query: 35  RRIPAD 18
           R +P +
Sbjct: 437 RPLPCE 442

>ORAI3_RAT (Q6AXR8) Protein orai-3|
          Length = 290

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 10/77 (12%)
 Frame = +1

Query: 88  PAGTVRRGGSPPVRLQQVAVSGISSAKPRQGIARRPQ----------AAHSEGWAVEGAS 237
           PA  V     PPV +     S ++ +       ++P           +AH  GW    AS
Sbjct: 184 PAPVVPMSQVPPVTVSLSLASNLTPSSASVATTQQPPKACPPRQVCGSAHGPGWQAAMAS 243

Query: 238 *TVAATAGLVYAAGLVH 288
             +    GLV+ A  +H
Sbjct: 244 TAIMVPVGLVFMAFALH 260


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,326,261
Number of Sequences: 219361
Number of extensions: 927490
Number of successful extensions: 3764
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3762
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)