| Clone Name | bast57c10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | NPTXR_HUMAN (O95502) Neuronal pentraxin receptor | 30 | 3.9 | 2 | NPTXR_RAT (O35764) Neuronal pentraxin receptor | 29 | 6.7 |
|---|
>NPTXR_HUMAN (O95502) Neuronal pentraxin receptor| Length = 499 Score = 29.6 bits (65), Expect = 3.9 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = +1 Query: 322 GLGGVDGPGALSGGPAPXXXXXXXXELLGRFAAAPVADA 438 G GG GP AL G PA L RF P+A A Sbjct: 64 GAGGSAGPPALPGAPAASAHPLPPGPLFSRFLCTPLAAA 102
>NPTXR_RAT (O35764) Neuronal pentraxin receptor| Length = 494 Score = 28.9 bits (63), Expect = 6.7 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = +1 Query: 322 GLGGVDGPGALSGGPAPXXXXXXXXELLGRFAAAPVADA 438 G GG GP L G PA LL RF P+A A Sbjct: 63 GAGGSAGPSVLPGEPAASVFPPPPGPLLSRFLCTPLAAA 101 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,062,250 Number of Sequences: 219361 Number of extensions: 270438 Number of successful extensions: 958 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 866 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 957 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)