ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast57c05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK060769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B01, full insert sequence Length = 1898 Score = 182 bits (92), Expect = 6e-43 Identities = 139/155 (89%) Strand = Plus / Plus Query: 288 gccgcgtcgtccggcggaggcggaggcttcttctcctcgatcgccgcgggcgtgcgcagc 347 ||||| ||||| || || ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 315 gccgcctcgtcgggaggcggcgggggcttcttctcctcgatcgccgccggcgtgcgcagc 374 Query: 348 tggggcaccgccgtccacaaatcggtcaacgggatggttggctatgaagggcttgaagtt 407 | ||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||| Sbjct: 375 ttgggcaccgccgtccacaaatctgtcaacgggttggtcggctatgaaggacttgaagtt 434 Query: 408 atcaacccagacggnggaacagacgatgcggaagc 442 || |||||||| || || ||||| ||||||||||| Sbjct: 435 attaacccagatggaggcacagaagatgcggaagc 469
>gb|AY103776.1| Zea mays PCO077793 mRNA sequence Length = 1843 Score = 129 bits (65), Expect = 8e-27 Identities = 118/136 (86%) Strand = Plus / Plus Query: 306 ggcggaggcttcttctcctcgatcgccgcgggcgtgcgcagctggggcaccgccgtccac 365 ||||| ||||||||||| ||| ||||||| ||| |||||||||||||||||||||| ||| Sbjct: 223 ggcggcggcttcttctcgtcgttcgccgccggcatgcgcagctggggcaccgccgtgcac 282 Query: 366 aaatcggtcaacgggatggttggctatgaagggcttgaagttatcaacccagacggngga 425 ||||| ||||||||| || |||| |||||||| ||||||||||| ||||| || || || Sbjct: 283 aaatccgtcaacgggctgcttggttatgaaggccttgaagttattaaccccgatggaggc 342 Query: 426 acagacgatgcggaag 441 ||||| ||||| |||| Sbjct: 343 acagatgatgctgaag 358 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 249 cgcagatcgccggcgatggggtccaaggaccagg 282 |||| ||||||||||||||| ||||||||||||| Sbjct: 169 cgcacatcgccggcgatgggatccaaggaccagg 202
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 288 gccgcgtcgtccggcggaggcggaggcttcttctcctcgatcgccgcgggcgtgcgcagc 347 ||||| ||||| || || ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 9191406 gccgcctcgtcgggaggcggcgggggcttcttctcctcgatcgccgccggcgtgcgcagc 9191465 Query: 348 tggggcaccgccgtccacaaatcggtcaacggg 380 | ||||||||||||||||||||| ||||||||| Sbjct: 9191466 ttgggcaccgccgtccacaaatctgtcaacggg 9191498 Score = 67.9 bits (34), Expect = 3e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 382 tggttggctatgaagggcttgaagttatcaacccagacggnggaacagacgatgcggaag 441 |||| ||||||||||| ||||||||||| |||||||| || || ||||| |||||||||| Sbjct: 9192280 tggtcggctatgaaggacttgaagttattaacccagatggaggcacagaagatgcggaag 9192339 Query: 442 c 442 | Sbjct: 9192340 c 9192340 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 7358980 cgccatcgccgtcgccatcg 7358999
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 288 gccgcgtcgtccggcggaggcggaggcttcttctcctcgatcgccgcgggcgtgcgcagc 347 ||||| ||||| || || ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 94985 gccgcctcgtcgggaggcggcgggggcttcttctcctcgatcgccgccggcgtgcgcagc 94926 Query: 348 tggggcaccgccgtccacaaatcggtcaacggg 380 | ||||||||||||||||||||| ||||||||| Sbjct: 94925 ttgggcaccgccgtccacaaatctgtcaacggg 94893 Score = 67.9 bits (34), Expect = 3e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 382 tggttggctatgaagggcttgaagttatcaacccagacggnggaacagacgatgcggaag 441 |||| ||||||||||| ||||||||||| |||||||| || || ||||| |||||||||| Sbjct: 94111 tggtcggctatgaaggacttgaagttattaacccagatggaggcacagaagatgcggaag 94052 Query: 442 c 442 | Sbjct: 94051 c 94051
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 288 gccgcgtcgtccggcggaggcggaggcttcttctcctcgatcgccgcgggcgtgcgcagc 347 ||||| ||||| || || ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 9189239 gccgcctcgtcgggaggcggcgggggcttcttctcctcgatcgccgccggcgtgcgcagc 9189298 Query: 348 tggggcaccgccgtccacaaatcggtcaacggg 380 | ||||||||||||||||||||| ||||||||| Sbjct: 9189299 ttgggcaccgccgtccacaaatctgtcaacggg 9189331 Score = 67.9 bits (34), Expect = 3e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 382 tggttggctatgaagggcttgaagttatcaacccagacggnggaacagacgatgcggaag 441 |||| ||||||||||| ||||||||||| |||||||| || || ||||| |||||||||| Sbjct: 9190113 tggtcggctatgaaggacttgaagttattaacccagatggaggcacagaagatgcggaag 9190172 Query: 442 c 442 | Sbjct: 9190173 c 9190173 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 7356875 cgccatcgccgtcgccatcg 7356894
>gb|BT009302.1| Triticum aestivum clone wlm1.pk0014.e3:fis, full insert mRNA sequence Length = 1264 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 96 tcgccgtcgccatcgctgccgctctcctc 124 ||||| ||||||||||||||||||||||| Sbjct: 9 tcgccatcgccatcgctgccgctctcctc 37 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 cggcgacgtcgccatcgccgtcgc 105 ||||||||||||||||||| |||| Sbjct: 1 cggcgacgtcgccatcgccatcgc 24
>gb|AE017286.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough plasmid pDV, complete sequence Length = 202301 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 |||||||||||||||||||||||| Sbjct: 178173 cgtcgccatcgccgtcgccatcgc 178150
>emb|AL731581.2|OSJN00228 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022F16, complete sequence Length = 154397 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 |||||||||||||||||||||||| Sbjct: 79196 cgtcgccatcgccgtcgccatcgc 79173
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 |||||||||||||||||||||||| Sbjct: 106884 cgtcgccatcgccgtcgccatcgc 106907 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||||||||| |||||||||| Sbjct: 106896 cgtcgccatcgccatcgccatcgc 106919
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 |||||||||||||||||||||||| Sbjct: 3969881 cgtcgccatcgccgtcgccatcgc 3969858 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 tcgccgtcgccatcgctgccgc 117 |||||||||||||||||||||| Sbjct: 9975394 tcgccgtcgccatcgctgccgc 9975373 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 |||| ||||||||||||||||||| Sbjct: 34160373 cgtctccatcgccgtcgccatcgc 34160396
>dbj|AB070751.1| Vigna angularis AdGt-8 mRNA for glucosyltransferase-8, partial cds Length = 1666 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 301 gcggaggcggaggcttcttctcctcgat 328 ||||||||||||||||||| |||||||| Sbjct: 332 gcggaggcggaggcttcttttcctcgat 359
>ref|XM_477918.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1374 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 89 gtcgccatcgccgtcgccatcgc 111 ||||||||||||||||||||||| Sbjct: 394 gtcgccatcgccgtcgccatcgc 372
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 89 gtcgccatcgccgtcgccatcgc 111 ||||||||||||||||||||||| Sbjct: 15518708 gtcgccatcgccgtcgccatcgc 15518686 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcgctgccg 116 |||||||||||||||||||| ||||| Sbjct: 21137078 cgccatcgccgtcgccatcgttgccg 21137103 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 cgccgtcgccatcgctgccgc 117 ||||||||||||||||||||| Sbjct: 9362141 cgccgtcgccatcgctgccgc 9362121 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 cgccgtcgccatcgctgccgc 117 ||||||||||||||||||||| Sbjct: 9352345 cgccgtcgccatcgctgccgc 9352325 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccat 108 ||||||||||||||||||||| Sbjct: 6312170 cgtcgccatcgccgtcgccat 6312150 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 21204936 cgccatcgccgtcgccatcg 21204955 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 18883688 cgccatcgccgtcgccatcg 18883669 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||| |||||||||||||||| Sbjct: 12512367 cgtcgccgtcgccgtcgccatcgc 12512390 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 9487151 cgccatcgccgtcgccatcg 9487132
>dbj|AP005252.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0015I22 Length = 121190 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 89 gtcgccatcgccgtcgccatcgc 111 ||||||||||||||||||||||| Sbjct: 116772 gtcgccatcgccgtcgccatcgc 116750
>dbj|AP005737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062P14 Length = 168223 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 89 gtcgccatcgccgtcgccatcgc 111 ||||||||||||||||||||||| Sbjct: 37191 gtcgccatcgccgtcgccatcgc 37169
>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0542B04, complete sequence Length = 182823 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 tcgccatcgccgtcgccatcgc 111 |||||||||||||||||||||| Sbjct: 164800 tcgccatcgccgtcgccatcgc 164779
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 tcgccgtcgccatcgctgccgc 117 |||||||||||||||||||||| Sbjct: 129818 tcgccgtcgccatcgctgccgc 129839
>ref|XM_361617.1| Magnaporthe grisea 70-15 hypothetical protein (MG04091.4) partial mRNA Length = 1017 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 tcgccgtcgccatcgctgccgc 117 |||||||||||||||||||||| Sbjct: 482 tcgccgtcgccatcgctgccgc 461
>ref|XM_655635.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3123.2), mRNA Length = 6186 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 tcgccatcgccgtcgccatcgc 111 |||||||||||||||||||||| Sbjct: 5897 tcgccatcgccgtcgccatcgc 5876
>emb|AL670004.1|NC5E6 Neurospora crassa DNA linkage group V Cosmid contig 5E6 Length = 119882 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgctg 113 ||||||||||||| |||||||||||| Sbjct: 117103 cgtcgccatcgccatcgccatcgctg 117128
>emb|AL606991.3|OSJN00113 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032B23, complete sequence Length = 120640 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 tcgccgtcgccatcgctgccgc 117 |||||||||||||||||||||| Sbjct: 70344 tcgccgtcgccatcgctgccgc 70323
>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 90 tcgccatcgccgtcgccatcgc 111 |||||||||||||||||||||| Sbjct: 115914 tcgccatcgccgtcgccatcgc 115935
>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 90 tcgccatcgccgtcgccatcgc 111 |||||||||||||||||||||| Sbjct: 115914 tcgccatcgccgtcgccatcgc 115935
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgctgccgc 117 ||||||| |||||||||||||||| ||||| Sbjct: 1721238 cgtcgccgtcgccgtcgccatcgccgccgc 1721209 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 26430829 cgccatcgccgtcgccatcg 26430810 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 25217640 cgccatcgccgtcgccatcg 25217621 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 21969493 cgccatcgccgtcgccatcg 21969474
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 tcgccatcgccgtcgccatcgc 111 |||||||||||||||||||||| Sbjct: 20320290 tcgccatcgccgtcgccatcgc 20320269 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 acggcgacgtcgccatcgccgtcg 104 |||||||||||| ||||||||||| Sbjct: 28210772 acggcgacgtcgacatcgccgtcg 28210749 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||||||||||||||| |||| Sbjct: 12088605 cgtcgccatcgccgtcgccgtcgc 12088628
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 tcgccgtcgccatcgctgccgc 117 |||||||||||||||||||||| Sbjct: 3538689 tcgccgtcgccatcgctgccgc 3538710 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gccgtcgccatcgctgccgc 117 |||||||||||||||||||| Sbjct: 20761423 gccgtcgccatcgctgccgc 20761442 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 14570255 cgccatcgccgtcgccatcg 14570236 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 14544245 cgccatcgccgtcgccatcg 14544264 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgcca 107 |||||||||||||||||||| Sbjct: 247852 cgtcgccatcgccgtcgcca 247833
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 gtcgccatcgccgtcgccatcg 110 |||||||||||||||||||||| Sbjct: 23102370 gtcgccatcgccgtcgccatcg 23102349 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||| |||||||||||||||| Sbjct: 8630185 cgtcgccgtcgccgtcgccatcgc 8630162
>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0696F12 Length = 165227 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcgctgccg 116 |||||||||||||||||||| ||||| Sbjct: 58439 cgccatcgccgtcgccatcgttgccg 58464 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 126297 cgccatcgccgtcgccatcg 126316
>dbj|AP006620.1| Nocardia farcinica IFM 10152 plasmid pNF2 DNA, complete sequence Length = 87093 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 90 tcgccatcgccgtcgccatcgc 111 |||||||||||||||||||||| Sbjct: 25931 tcgccatcgccgtcgccatcgc 25952
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 gtcgccatcgccgtcgccatcg 110 |||||||||||||||||||||| Sbjct: 53018 gtcgccatcgccgtcgccatcg 52997
>ref|XM_313284.2| Anopheles gambiae str. PEST ENSANGP00000010498 (ENSANGG00000008009), partial mRNA Length = 2751 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 cgccgtcgccatcgctgccgct 118 |||||||||||||||||||||| Sbjct: 2491 cgccgtcgccatcgctgccgct 2512
>ref|XM_562379.1| Anopheles gambiae str. PEST ENSANGP00000023203 (ENSANGG00000008009), mRNA Length = 2914 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 cgccgtcgccatcgctgccgct 118 |||||||||||||||||||||| Sbjct: 2654 cgccgtcgccatcgctgccgct 2675
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 tcgccgtcgccatcgctgccgc 117 |||||||||||||||||||||| Sbjct: 3538610 tcgccgtcgccatcgctgccgc 3538631 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gccgtcgccatcgctgccgc 117 |||||||||||||||||||| Sbjct: 20772687 gccgtcgccatcgctgccgc 20772706 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 14578496 cgccatcgccgtcgccatcg 14578477 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 14552486 cgccatcgccgtcgccatcg 14552505 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgcca 107 |||||||||||||||||||| Sbjct: 247849 cgtcgccatcgccgtcgcca 247830
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 tcgccatcgccgtcgccatcgc 111 |||||||||||||||||||||| Sbjct: 20630527 tcgccatcgccgtcgccatcgc 20630506 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 acggcgacgtcgccatcgccgtcg 104 |||||||||||| ||||||||||| Sbjct: 28195650 acggcgacgtcgacatcgccgtcg 28195627 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||||||||||||||| |||| Sbjct: 12167912 cgtcgccatcgccgtcgccgtcgc 12167935
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgctgccgc 117 ||||||| |||||||||||||||| ||||| Sbjct: 1721214 cgtcgccgtcgccgtcgccatcgccgccgc 1721185 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 26358998 cgccatcgccgtcgccatcg 26358979 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 25145816 cgccatcgccgtcgccatcg 25145797 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 21897838 cgccatcgccgtcgccatcg 21897819
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgctgccgc 117 ||||||| |||||||||||||||| ||||| Sbjct: 119246 cgtcgccgtcgccgtcgccatcgccgccgc 119275
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgctgccgc 117 ||||||| |||||||||||||||| ||||| Sbjct: 45683 cgtcgccgtcgccgtcgccatcgccgccgc 45712
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 tcgccatcgccgtcgccatcgc 111 |||||||||||||||||||||| Sbjct: 1612393 tcgccatcgccgtcgccatcgc 1612372
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 acggcgacgtcgccatcgccg 101 ||||||||||||||||||||| Sbjct: 745111 acggcgacgtcgccatcgccg 745131
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcgc 111 ||||||||||||||||||||| Sbjct: 1053763 cgccatcgccgtcgccatcgc 1053743
>ref|NG_004807.2| Homo sapiens asparagine-linked glycosylation 3-like (LOC442131) pseudogene on chromosome 5 Length = 1237 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 tggttggctatgaagggcttg 402 ||||||||||||||||||||| Sbjct: 829 tggttggctatgaagggcttg 809
>ref|XM_843039.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0437) partial mRNA Length = 4500 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 acggcgacgtcgccatcgccg 101 ||||||||||||||||||||| Sbjct: 1229 acggcgacgtcgccatcgccg 1209
>gb|AC091967.3| Homo sapiens chromosome 5 clone RP11-489I4, complete sequence Length = 187245 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 tggttggctatgaagggcttg 402 ||||||||||||||||||||| Sbjct: 126419 tggttggctatgaagggcttg 126399
>gb|AC010253.5| Homo sapiens chromosome 5 clone CTC-432B14, complete sequence Length = 76440 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 tggttggctatgaagggcttg 402 ||||||||||||||||||||| Sbjct: 2766 tggttggctatgaagggcttg 2786
>tpg|BK001241.1| TPA: TPA_exp: Homo sapiens NOT56L pseudogene, complete sequence Length = 1320 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 tggttggctatgaagggcttg 402 ||||||||||||||||||||| Sbjct: 899 tggttggctatgaagggcttg 879
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccat 108 ||||||||||||||||||||| Sbjct: 4786864 cgtcgccatcgccgtcgccat 4786884
>gb|AC091978.3| Homo sapiens chromosome 5 clone RP11-531A21, complete sequence Length = 192708 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 tggttggctatgaagggcttg 402 ||||||||||||||||||||| Sbjct: 151829 tggttggctatgaagggcttg 151849
>dbj|AP004304.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0483E06 Length = 159035 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 cgccgtcgccatcgctgccgc 117 ||||||||||||||||||||| Sbjct: 124985 cgccgtcgccatcgctgccgc 124965 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 cgccgtcgccatcgctgccgc 117 ||||||||||||||||||||| Sbjct: 115189 cgccgtcgccatcgctgccgc 115169
>dbj|AP006267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0004F07 Length = 135890 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 cgccgtcgccatcgctgccgc 117 ||||||||||||||||||||| Sbjct: 33009 cgccgtcgccatcgctgccgc 32989 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 cgccgtcgccatcgctgccgc 117 ||||||||||||||||||||| Sbjct: 23213 cgccgtcgccatcgctgccgc 23193
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccat 108 ||||||||||||||||||||| Sbjct: 31513 cgtcgccatcgccgtcgccat 31533
>dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1116_C08 Length = 102317 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccat 108 ||||||||||||||||||||| Sbjct: 62730 cgtcgccatcgccgtcgccat 62710
>dbj|AK110390.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-E03, full insert sequence Length = 2963 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 gtcgccatcgccgtcgccatc 109 ||||||||||||||||||||| Sbjct: 1651 gtcgccatcgccgtcgccatc 1671
>dbj|AB091435.1| Burkholderia multivorans genes for probable lipoprotein transmembrane, 3-isopropylmalate dehydratase large and small subunits, 3-isopropylmalate dehydrogenase oxidoreductase, aspartate-semialdehyde dehydrogenase, probable transmembrane protein, tRNA pseudouridine synthase, N-(5'-phosphoribosyl) anthranilate isomerase, tryptophan synthase beta chain, probable DNA-methyltransferasee, tryptophan synthase alpha chain, acetyl-CoA carboxylase beta subunit, partial and complete cds Length = 12977 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 327 atcgccgcgggcgtgcgcagctggg 351 ||||||||| ||||||||||||||| Sbjct: 5846 atcgccgcgcgcgtgcgcagctggg 5822
>emb|AL672249.6| Mouse DNA sequence from clone RP23-92P11 on chromosome X, complete sequence Length = 191671 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 cgcctgcttgcccttttcttctcaccacc 30 ||||| ||||||||||||||||| ||||| Sbjct: 136978 cgcctccttgcccttttcttctcgccacc 137006
>ref|NM_120288.2| Arabidopsis thaliana oxysterol binding AT5G02100 mRNA, complete cds Length = 1690 Score = 40.1 bits (20), Expect = 6.0 Identities = 40/47 (85%) Strand = Plus / Plus Query: 390 tatgaagggcttgaagttatcaacccagacggnggaacagacgatgc 436 ||||||||||||||||| || || ||||| || | ||||||||||| Sbjct: 228 tatgaagggcttgaagtgattaatccagaaggaagtacagacgatgc 274
>ref|XM_481917.1| Oryza sativa (japonica cultivar-group), mRNA Length = 153 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gccatcgccgtcgccatcgc 111 |||||||||||||||||||| Sbjct: 72 gccatcgccgtcgccatcgc 53
>ref|XM_509810.1| PREDICTED: Pan troglodytes similar to Brn-3a protein - mouse (LOC452754), mRNA Length = 2424 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 tccctctgaccgcgcagatcgccg 260 |||||||||||||||||| ||||| Sbjct: 1824 tccctctgaccgcgcagagcgccg 1801
>ref|NM_194503.1| Oryza sativa (japonica cultivar-group) putative pol polyprotein (OSJNBa0096E22.13), mRNA Length = 3018 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgcca 107 |||||||||||||||||||| Sbjct: 124 cgtcgccatcgccgtcgcca 105
>ref|XM_467416.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2085 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 cggcggaggcggaggcttcttctc 322 |||||| ||||||||||||||||| Sbjct: 31 cggcggcggcggaggcttcttctc 8
>ref|XM_477658.1| Oryza sativa (japonica cultivar-group), mRNA Length = 606 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||| |||||||||||||||| Sbjct: 423 cgtcgccgtcgccgtcgccatcgc 400
>gb|AY016020.1| Gallus gallus alpha globin gene cluster, complete sequence Length = 103190 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 ctcctcctcagtagcgctctcctc 142 ||||||||||| |||||||||||| Sbjct: 83533 ctcctcctcagcagcgctctcctc 83556
>gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0036H01, complete sequence Length = 182504 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||||||||||||||| |||| Sbjct: 79467 cgtcgccatcgccgtcgccgtcgc 79444
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 acggcgacgtcgccatcgccgtcg 104 |||||||||||| ||||||||||| Sbjct: 15873 acggcgacgtcgacatcgccgtcg 15850
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 acggcgacgtcgccatcgccgtcg 104 |||||||||||| ||||||||||| Sbjct: 169308 acggcgacgtcgacatcgccgtcg 169285
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 76952 cgccatcgccgtcgccatcg 76971
>gb|AY727927.1| Triticum aestivum ADP-glucose pyrophosphorylase small subunit mRNA, complete cds; plastid Length = 1870 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gccatcgccgtcgccatcgc 111 |||||||||||||||||||| Sbjct: 98 gccatcgccgtcgccatcgc 79
>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19, complete sequence Length = 174752 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgcca 107 |||||||||||||||||||| Sbjct: 12910 cgtcgccatcgccgtcgcca 12891
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 33253 cgccatcgccgtcgccatcg 33272
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 145452 cgccatcgccgtcgccatcg 145471 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 136895 cgccatcgccgtcgccatcg 136914
>ref|NM_177914.2| Mus musculus diacylglycerol kinase kappa (Dgkk), mRNA Length = 5598 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ctctcctctaccacctctta 154 |||||||||||||||||||| Sbjct: 4145 ctctcctctaccacctctta 4164
>gb|AY486332.1| Homo sapiens BCL10-associated protein variant 2 (BAG) mRNA, complete cds, alternatively spliced Length = 1341 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ggaggcggaggcttcttctc 322 |||||||||||||||||||| Sbjct: 495 ggaggcggaggcttcttctc 476
>gb|AY486331.1| Homo sapiens BCL10-associated protein variant 1 (BAG) mRNA, complete cds, alternatively spliced Length = 1214 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ggaggcggaggcttcttctc 322 |||||||||||||||||||| Sbjct: 368 ggaggcggaggcttcttctc 349
>ref|XM_675412.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7235.2), mRNA Length = 1143 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 tggccgcgtcgtccggcgga 305 |||||||||||||||||||| Sbjct: 421 tggccgcgtcgtccggcgga 402
>ref|NM_198077.1| Homo sapiens chromosome 1 open reading frame 52 (C1orf52), mRNA Length = 1232 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ggaggcggaggcttcttctc 322 |||||||||||||||||||| Sbjct: 368 ggaggcggaggcttcttctc 349
>ref|XM_747673.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g13960) partial mRNA Length = 999 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||||||||| |||||||||| Sbjct: 691 cgtcgccatcgccatcgccatcgc 668
>ref|NM_006237.2| Homo sapiens POU domain, class 4, transcription factor 1 (POU4F1), mRNA Length = 3824 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 tccctctgaccgcgcagatcgccg 260 |||||||||||||||||| ||||| Sbjct: 69 tccctctgaccgcgcagagcgccg 46
>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217 (CG31217), and ultrabithorax (Ubx) genes, complete cds Length = 308092 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgctgcc 115 ||||||| ||||||||||| |||||||| Sbjct: 18605 cgtcgccgtcgccgtcgccgtcgctgcc 18632
>gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic monensin biosynthesis gene cluster, partial sequence Length = 103450 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgcca 107 |||||||||||||||||||| Sbjct: 31402 cgtcgccatcgccgtcgcca 31383
>emb|AL590113.8| Human DNA sequence from clone RP11-234D19 on chromosome 1 Contains a novel gene (gm117), the BCL10 gene for B-cell CLL/lymphoma 10 and the 5' end of a novel gene, complete sequence Length = 97789 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 ggaggcggaggcttcttctc 322 |||||||||||||||||||| Sbjct: 48157 ggaggcggaggcttcttctc 48176
>emb|AL445209.4| Human DNA sequence from clone RP11-52L5 on chromosome 13 Contains a transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene, a novel gene, the POU4F1 gene for POU domain, class 4, transcription factor 1 (BRN3A, RDC-1), the 3' end a novel gene (contains FLJ13449, possible ortholog of mouse 2810449K13Rik protein) and 3 CpG islands, complete sequence Length = 157302 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 tccctctgaccgcgcagatcgccg 260 |||||||||||||||||| ||||| Sbjct: 120714 tccctctgaccgcgcagagcgccg 120737
>emb|AL138878.10| Human DNA sequence from clone RP11-288G3 on chromosome 6 Contains the 3' end of the RIOK1 gene for RIO kinase 1 (yeast), a hetergeneous riboprotein L (HNRNP L) pseudogene, a ribosomal protein S26 pseudogene and a isocitrate dehydrogenase 1 (IDH1) pseudogene, complete sequence Length = 128320 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cttgcccttttcttctcacc 27 |||||||||||||||||||| Sbjct: 108619 cttgcccttttcttctcacc 108638
>gb|AC163411.3| Mus musculus chromosome 3, clone RP24-242E11, complete sequence Length = 144476 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 tgaagggcttgaagttatca 411 |||||||||||||||||||| Sbjct: 9914 tgaagggcttgaagttatca 9895
>emb|AL008713.1|HS93C23 Human DNA sequence from clone RP1-93C23 on chromosome Xq27 Contains a steroid-5-alpha-reductase alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) (SRD5A1) pseudogene, complete sequence Length = 72245 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||| |||||||||||||||| Sbjct: 69525 cgtcgccgtcgccgtcgccatcgc 69502
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgcca 107 |||||||||||||||||||| Sbjct: 247852 cgtcgccatcgccgtcgcca 247833
>gb|AY091166.1| Arabidopsis thaliana putative oxysterol-binding protein (At5g02100) mRNA, complete cds Length = 1393 Score = 40.1 bits (20), Expect = 6.0 Identities = 40/47 (85%) Strand = Plus / Plus Query: 390 tatgaagggcttgaagttatcaacccagacggnggaacagacgatgc 436 ||||||||||||||||| || || ||||| || | ||||||||||| Sbjct: 109 tatgaagggcttgaagtgattaatccagaaggaagtacagacgatgc 155
>gb|AY050839.1| Arabidopsis thaliana unknown protein (At5g02100) mRNA, complete cds Length = 1707 Score = 40.1 bits (20), Expect = 6.0 Identities = 40/47 (85%) Strand = Plus / Plus Query: 390 tatgaagggcttgaagttatcaacccagacggnggaacagacgatgc 436 ||||||||||||||||| || || ||||| || | ||||||||||| Sbjct: 228 tatgaagggcttgaagtgattaatccagaaggaagtacagacgatgc 274
>emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercontig; segment 3/3 Length = 227448 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||||||||| |||||||||| Sbjct: 83036 cgtcgccatcgccatcgccatcgc 83013
>gb|BC029538.1| Homo sapiens chromosome 1 open reading frame 52, mRNA (cDNA clone MGC:33961 IMAGE:5303467), complete cds Length = 1232 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ggaggcggaggcttcttctc 322 |||||||||||||||||||| Sbjct: 368 ggaggcggaggcttcttctc 349
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gccatcgccgtcgccatcgc 111 |||||||||||||||||||| Sbjct: 141535 gccatcgccgtcgccatcgc 141554
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gccatcgccgtcgccatcgc 111 |||||||||||||||||||| Sbjct: 159803 gccatcgccgtcgccatcgc 159784
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 |||| ||||||||||||||||||| Sbjct: 71755 cgtctccatcgccgtcgccatcgc 71778
>emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BAC clone T7H20 (ESSA project) Length = 87581 Score = 40.1 bits (20), Expect = 6.0 Identities = 40/47 (85%) Strand = Plus / Plus Query: 390 tatgaagggcttgaagttatcaacccagacggnggaacagacgatgc 436 ||||||||||||||||| || || ||||| || | ||||||||||| Sbjct: 45034 tatgaagggcttgaagtgattaatccagaaggaagtacagacgatgc 45080
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ggaccaggacctggccgcgt 294 |||||||||||||||||||| Sbjct: 1183668 ggaccaggacctggccgcgt 1183687
>emb|CR860080.1| Pongo pygmaeus mRNA; cDNA DKFZp469K0225 (from clone DKFZp469K0225) Length = 1866 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 267 gggtccaaggaccaggacctggcc 290 ||||||| |||||||||||||||| Sbjct: 155 gggtccacggaccaggacctggcc 132
>gb|BC075627.1| Mus musculus diacylglycerol kinase kappa, mRNA (cDNA clone MGC:92983 IMAGE:6852516), complete cds Length = 5598 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ctctcctctaccacctctta 154 |||||||||||||||||||| Sbjct: 4145 ctctcctctaccacctctta 4164
>gb|AC104608.7| Drosophila melanogaster X BAC RP98-35A18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174893 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 gtcgccatcgccgtcgccatcgctgccg 116 |||||||||||| |||||||||| |||| Sbjct: 59113 gtcgccatcgccatcgccatcgccgccg 59140
>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent ansamitocin biosynthetic gene cluster I, partial sequence Length = 82746 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ggaccaggacctggccgcgt 294 |||||||||||||||||||| Sbjct: 18382 ggaccaggacctggccgcgt 18363
>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174645 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tcgccatcgccgtcgccatc 109 |||||||||||||||||||| Sbjct: 31173 tcgccatcgccgtcgccatc 31154
>dbj|AK126929.1| Homo sapiens cDNA FLJ44982 fis, clone BRAWH3003975 Length = 3388 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ggaggcggaggcttcttctc 322 |||||||||||||||||||| Sbjct: 525 ggaggcggaggcttcttctc 506
>gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0072A12, complete sequence Length = 149347 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 42717 cgccatcgccgtcgccatcg 42698 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 16707 cgccatcgccgtcgccatcg 16726
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gccgtcgccatcgctgccgc 117 |||||||||||||||||||| Sbjct: 23822 gccgtcgccatcgctgccgc 23841
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 110236 cgccatcgccgtcgccatcg 110255
>gb|AC099400.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096E22, complete sequence Length = 133846 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgcca 107 |||||||||||||||||||| Sbjct: 97515 cgtcgccatcgccgtcgcca 97496
>gb|AF387612.1| Homo sapiens gm117 form B mRNA, partial cds, alternatively spliced Length = 631 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ggaggcggaggcttcttctc 322 |||||||||||||||||||| Sbjct: 486 ggaggcggaggcttcttctc 467
>gb|AF387611.1| Homo sapiens gm117 form A mRNA, partial cds, alternatively spliced Length = 504 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ggaggcggaggcttcttctc 322 |||||||||||||||||||| Sbjct: 359 ggaggcggaggcttcttctc 340
>gb|AC027320.5|AC027320 Homo sapiens chromosome 5 clone CTC-565P5, complete sequence Length = 140349 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 cgcctgcttgcccttttctt 21 |||||||||||||||||||| Sbjct: 95193 cgcctgcttgcccttttctt 95212
>gb|AC009389.9|AC009389 Drosophila melanogaster, chromosome 3R, region 98C-98C, BAC clone BACR01F12, complete sequence Length = 152853 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||||||||| |||||||||| Sbjct: 112941 cgtcgccatcgccatcgccatcgc 112964
>ref|NG_001196.2| Homo sapiens steroid-5-alpha-reductase, alpha polypeptide pseudogene 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha pseudogene) (SRD5AP1) on chromosome X Length = 2358 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||| |||||||||||||||| Sbjct: 196 cgtcgccgtcgccgtcgccatcgc 173
>gb|AC008475.6|AC008475 Homo sapiens chromosome 5 clone CTC-379K10, complete sequence Length = 76967 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 cgcctgcttgcccttttctt 21 |||||||||||||||||||| Sbjct: 9019 cgcctgcttgcccttttctt 9038
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 tcgccgtcgccatcgctgccgctc 119 |||||||||||||||||| ||||| Sbjct: 11111143 tcgccgtcgccatcgctgtcgctc 11111166 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcgctgc 114 |||| ||||||||||||||||||| Sbjct: 2899861 cgccttcgccgtcgccatcgctgc 2899838
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gccatcgccgtcgccatcgc 111 |||||||||||||||||||| Sbjct: 16348411 gccatcgccgtcgccatcgc 16348430
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 29660950 cgccatcgccgtcgccatcg 29660969 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 29652393 cgccatcgccgtcgccatcg 29652412 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 26795013 cgccatcgccgtcgccatcg 26795032
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 cggcggaggcggaggcttcttctc 322 |||||| ||||||||||||||||| Sbjct: 29399375 cggcggcggcggaggcttcttctc 29399398
>gb|AC007819.8|AC007819 Drosophila melanogaster, chromosome 3R, region 98C-98C, BAC clone BACR06K21, complete sequence Length = 189649 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||||||||| |||||||||| Sbjct: 19913 cgtcgccatcgccatcgccatcgc 19936
>gb|AF537363.1| Hordeum vulgare subsp. vulgare ADP-glucose pyrophosphorylase small subunit mRNA, complete cds; chloroplast gene for chloroplast product Length = 1800 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gccatcgccgtcgccatcgc 111 |||||||||||||||||||| Sbjct: 91 gccatcgccgtcgccatcgc 72
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_H06 Length = 139868 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 cggcggaggcggaggcttcttctc 322 |||||| ||||||||||||||||| Sbjct: 50247 cggcggcggcggaggcttcttctc 50270
>dbj|AB194780.1| Pycnoporus coccineus gpd gene for glyceraldehyde-3-phosphate dehydrogenase, complete cds Length = 3184 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 cgctctcctcctcagtagcgctctcctc 142 |||||||||||||| || |||||||||| Sbjct: 3005 cgctctcctcctcactatcgctctcctc 2978
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cgacgtcgccatcgccgtcg 104 |||||||||||||||||||| Sbjct: 1521185 cgacgtcgccatcgccgtcg 1521204
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 cgatcgccgcgggcgtgcgc 344 |||||||||||||||||||| Sbjct: 2419090 cgatcgccgcgggcgtgcgc 2419109
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||| |||||||||||||||| Sbjct: 45167 cgtcgccgtcgccgtcgccatcgc 45144
>dbj|AP004630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0031A09 Length = 162511 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||| |||||||||||||||| Sbjct: 105004 cgtcgccgtcgccgtcgccatcgc 104981
>dbj|AP005745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017O03 Length = 180651 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcgctgc 114 |||| ||||||||||||||||||| Sbjct: 90853 cgccttcgccgtcgccatcgctgc 90830
>dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0613B07 Length = 191756 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||| |||||||||||||||| Sbjct: 156649 cgtcgccgtcgccgtcgccatcgc 156672
>dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1100H02 Length = 128773 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 69137 cgccatcgccgtcgccatcg 69118
>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0004P20 Length = 160410 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 tcgccgtcgccatcgctgccgctc 119 |||||||||||||||||| ||||| Sbjct: 69950 tcgccgtcgccatcgctgtcgctc 69973
>emb|AL671962.5| Mouse DNA sequence from clone RP23-163A2 on chromosome X, complete sequence Length = 199534 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ctctcctctaccacctctta 154 |||||||||||||||||||| Sbjct: 90490 ctctcctctaccacctctta 90509
>gb|AY943951.1| Streptomyces sp. F2 arsenic gene cluster, partial sequence Length = 7932 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gccatcgccgtcgccatcgc 111 |||||||||||||||||||| Sbjct: 2126 gccatcgccgtcgccatcgc 2145
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gccatcgccgtcgccatcgc 111 |||||||||||||||||||| Sbjct: 54263 gccatcgccgtcgccatcgc 54282
>dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1112_F06 Length = 104419 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 83874 cgccatcgccgtcgccatcg 83855
>dbj|AK102883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112J01, full insert sequence Length = 1876 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 acggcgacgtcgccatcgccgtcg 104 |||||||||||| ||||||||||| Sbjct: 946 acggcgacgtcgacatcgccgtcg 969
>dbj|AK100931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135K21, full insert sequence Length = 1663 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 acggcgacgtcgccatcgccgtcg 104 |||||||||||| ||||||||||| Sbjct: 702 acggcgacgtcgacatcgccgtcg 725
>dbj|AK068743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162A17, full insert sequence Length = 2631 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 cggcggaggcggaggcttcttctc 322 |||||| ||||||||||||||||| Sbjct: 206 cggcggcggcggaggcttcttctc 183
>dbj|AK059271.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B11, full insert sequence Length = 1704 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 acggcgacgtcgccatcgccgtcg 104 |||||||||||| ||||||||||| Sbjct: 829 acggcgacgtcgacatcgccgtcg 852
>gb|AY107250.1| Zea mays PCO068082 mRNA sequence Length = 1198 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||||||||||||||| |||| Sbjct: 254 cgtcgccatcgccgtcgccgtcgc 231
>emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 |||| ||||||||||||||||||| Sbjct: 76664 cgtctccatcgccgtcgccatcgc 76687
>emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete sequence Length = 101125 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 |||| ||||||||||||||||||| Sbjct: 11034 cgtctccatcgccgtcgccatcgc 11057
>gb|AE003764.3| Drosophila melanogaster chromosome 3R, section 102 of 118 of the complete sequence Length = 231455 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||||||||| |||||||||| Sbjct: 5390 cgtcgccatcgccatcgccatcgc 5413
>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the complete sequence Length = 290640 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tcgccatcgccgtcgccatc 109 |||||||||||||||||||| Sbjct: 9641 tcgccatcgccgtcgccatc 9622
>gb|AE003441.3| Drosophila melanogaster chromosome X, section 25 of 74 of the complete sequence Length = 285949 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 89 gtcgccatcgccgtcgccatcgctgccg 116 |||||||||||| |||||||||| |||| Sbjct: 65521 gtcgccatcgccatcgccatcgccgccg 65494
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||| |||||||||||||||||| Sbjct: 678028 cgtcgacatcgccgtcgccatcgc 678005
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 1544002 cgccatcgccgtcgccatcg 1543983
>emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa0062E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138308 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 75621 cgccatcgccgtcgccatcg 75602
>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146366 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 111247 cgccatcgccgtcgccatcg 111266
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccatcgccgtcgccatcg 110 |||||||||||||||||||| Sbjct: 119550 cgccatcgccgtcgccatcg 119569
>gb|AC140259.3| Mus musculus BAC clone RP24-295G1 from 3, complete sequence Length = 167743 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tgaagggcttgaagttatca 411 |||||||||||||||||||| Sbjct: 65796 tgaagggcttgaagttatca 65815
>emb|CR954188.2| Medicago truncatula chromosome 5 clone mth2-193f16, COMPLETE SEQUENCE Length = 106631 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||||||||| |||||||||| Sbjct: 20131 cgtcgccatcgccatcgccatcgc 20108
>gb|L20433.1|HUMOCTF1A Human octamer binding transcription factor 1 (OTF1) mRNA, complete cds Length = 3824 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 tccctctgaccgcgcagatcgccg 260 |||||||||||||||||| ||||| Sbjct: 69 tccctctgaccgcgcagagcgccg 46
>gb|M68887.1|HUMSRD5AP H.sapiens steroid reductase pseudogene Length = 1645 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cgtcgccatcgccgtcgccatcgc 111 ||||||| |||||||||||||||| Sbjct: 721 cgtcgccgtcgccgtcgccatcgc 698
>emb|AL390025.1| Human DNA sequence from clone RP3-336K20 on chromosome 6 Contains a pseudogene similar to hetergeneous riboprotein L (HNRNP L), to Ribosomal protein S26, a pseudogene similar to isocitrate dehydrogenase (NADP+), STSs and GSSs, complete sequence Length = 52747 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cttgcccttttcttctcacc 27 |||||||||||||||||||| Sbjct: 33045 cttgcccttttcttctcacc 33064 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,069,567 Number of Sequences: 3902068 Number of extensions: 3069567 Number of successful extensions: 74610 Number of sequences better than 10.0: 149 Number of HSP's better than 10.0 without gapping: 168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70531 Number of HSP's gapped (non-prelim): 4073 length of query: 446 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 424 effective length of database: 17,147,199,772 effective search space: 7270412703328 effective search space used: 7270412703328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
