ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast57c03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_195345.1| Oryza sativa (japonica cultivar-group) putative acetyl transferase (OSJNBa0003P07.2), mRNA Length = 1458 Score = 119 bits (60), Expect = 8e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 50 tggtgaccttcacggcccgccggagcgagccggagcagctgcgcccggcgcgggcgactc 109 ||||||||||||| | |||||||||||||||| || ||| || |||||| || |||| | Sbjct: 5 tggtgaccttcacatctcgccggagcgagccggtgctgctccggccggcgaggccgacgc 64 Query: 110 cgcgggagaccaaggccctgtcggacctcgacgatcagcgcacgctgcgctactacgaga 169 |||||||||| ||| || || ||||||||||| ||||| |||||||| |||||||||| Sbjct: 65 cgcgggagacgaagcagctctccgacctcgacgaccagcggacgctgcggtactacgaga 124 Query: 170 cggtgatcggcttcttccgc 189 ||||| |||||||||||||| Sbjct: 125 cggtggtcggcttcttccgc 144 Score = 115 bits (58), Expect = 1e-22 Identities = 127/150 (84%) Strand = Plus / Plus Query: 302 ggctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgc 361 ||||||| ||||||||||||||||| ||||||||||||||||||||| ||| |||| || Sbjct: 293 ggctggtggtggactgcacggccgaaggggtggtgttcgtggaggccgacgccgacgtgc 352 Query: 362 gcctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagttgttgt 421 | || || || |||||| | |||||||||||||||||||| ||||| | ||| || | | Sbjct: 353 ggctggaggacttcggccagccgctgctgccgccgtacccgtgcgtcggcgagctgctct 412 Query: 422 gccatgtcggcgacaccagggccgtcgttg 451 || | | ||||||||||||||| ||||||| Sbjct: 413 gcgacgccggcgacaccagggctgtcgttg 442 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 225 catcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccggctcag 284 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct: 201 catcagggcggcgctcgcggaggcgctggtgtactactaccccgtcgccggccggctgag 260 Query: 285 ggagg 289 ||||| Sbjct: 261 ggagg 265
>gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0003P07, complete sequence Length = 175116 Score = 119 bits (60), Expect = 8e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 50 tggtgaccttcacggcccgccggagcgagccggagcagctgcgcccggcgcgggcgactc 109 ||||||||||||| | |||||||||||||||| || ||| || |||||| || |||| | Sbjct: 10047 tggtgaccttcacatctcgccggagcgagccggtgctgctccggccggcgaggccgacgc 10106 Query: 110 cgcgggagaccaaggccctgtcggacctcgacgatcagcgcacgctgcgctactacgaga 169 |||||||||| ||| || || ||||||||||| ||||| |||||||| |||||||||| Sbjct: 10107 cgcgggagacgaagcagctctccgacctcgacgaccagcggacgctgcggtactacgaga 10166 Query: 170 cggtgatcggcttcttccgc 189 ||||| |||||||||||||| Sbjct: 10167 cggtggtcggcttcttccgc 10186 Score = 115 bits (58), Expect = 1e-22 Identities = 127/150 (84%) Strand = Plus / Plus Query: 302 ggctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgc 361 ||||||| ||||||||||||||||| ||||||||||||||||||||| ||| |||| || Sbjct: 10335 ggctggtggtggactgcacggccgaaggggtggtgttcgtggaggccgacgccgacgtgc 10394 Query: 362 gcctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagttgttgt 421 | || || || |||||| | |||||||||||||||||||| ||||| | ||| || | | Sbjct: 10395 ggctggaggacttcggccagccgctgctgccgccgtacccgtgcgtcggcgagctgctct 10454 Query: 422 gccatgtcggcgacaccagggccgtcgttg 451 || | | ||||||||||||||| ||||||| Sbjct: 10455 gcgacgccggcgacaccagggctgtcgttg 10484 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 225 catcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccggctcag 284 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct: 10243 catcagggcggcgctcgcggaggcgctggtgtactactaccccgtcgccggccggctgag 10302 Query: 285 ggagg 289 ||||| Sbjct: 10303 ggagg 10307
>gb|AC105377.12| Oryza sativa chromosome 10 BAC OSJNBa0034E15 genomic sequence, complete sequence Length = 100285 Score = 119 bits (60), Expect = 8e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 50 tggtgaccttcacggcccgccggagcgagccggagcagctgcgcccggcgcgggcgactc 109 ||||||||||||| | |||||||||||||||| || ||| || |||||| || |||| | Sbjct: 89752 tggtgaccttcacatctcgccggagcgagccggtgctgctccggccggcgaggccgacgc 89811 Query: 110 cgcgggagaccaaggccctgtcggacctcgacgatcagcgcacgctgcgctactacgaga 169 |||||||||| ||| || || ||||||||||| ||||| |||||||| |||||||||| Sbjct: 89812 cgcgggagacgaagcagctctccgacctcgacgaccagcggacgctgcggtactacgaga 89871 Query: 170 cggtgatcggcttcttccgc 189 ||||| |||||||||||||| Sbjct: 89872 cggtggtcggcttcttccgc 89891 Score = 115 bits (58), Expect = 1e-22 Identities = 127/150 (84%) Strand = Plus / Plus Query: 302 ggctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgc 361 ||||||| ||||||||||||||||| ||||||||||||||||||||| ||| |||| || Sbjct: 90040 ggctggtggtggactgcacggccgaaggggtggtgttcgtggaggccgacgccgacgtgc 90099 Query: 362 gcctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagttgttgt 421 | || || || |||||| | |||||||||||||||||||| ||||| | ||| || | | Sbjct: 90100 ggctggaggacttcggccagccgctgctgccgccgtacccgtgcgtcggcgagctgctct 90159 Query: 422 gccatgtcggcgacaccagggccgtcgttg 451 || | | ||||||||||||||| ||||||| Sbjct: 90160 gcgacgccggcgacaccagggctgtcgttg 90189 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 225 catcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccggctcag 284 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct: 89948 catcagggcggcgctcgcggaggcgctggtgtactactaccccgtcgccggccggctgag 90007 Query: 285 ggagg 289 ||||| Sbjct: 90008 ggagg 90012
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 119 bits (60), Expect = 8e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 50 tggtgaccttcacggcccgccggagcgagccggagcagctgcgcccggcgcgggcgactc 109 ||||||||||||| | |||||||||||||||| || ||| || |||||| || |||| | Sbjct: 6292194 tggtgaccttcacatctcgccggagcgagccggtgctgctccggccggcgaggccgacgc 6292253 Query: 110 cgcgggagaccaaggccctgtcggacctcgacgatcagcgcacgctgcgctactacgaga 169 |||||||||| ||| || || ||||||||||| ||||| |||||||| |||||||||| Sbjct: 6292254 cgcgggagacgaagcagctctccgacctcgacgaccagcggacgctgcggtactacgaga 6292313 Query: 170 cggtgatcggcttcttccgc 189 ||||| |||||||||||||| Sbjct: 6292314 cggtggtcggcttcttccgc 6292333 Score = 115 bits (58), Expect = 1e-22 Identities = 127/150 (84%) Strand = Plus / Plus Query: 302 ggctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgc 361 ||||||| ||||||||||||||||| ||||||||||||||||||||| ||| |||| || Sbjct: 6292482 ggctggtggtggactgcacggccgaaggggtggtgttcgtggaggccgacgccgacgtgc 6292541 Query: 362 gcctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagttgttgt 421 | || || || |||||| | |||||||||||||||||||| ||||| | ||| || | | Sbjct: 6292542 ggctggaggacttcggccagccgctgctgccgccgtacccgtgcgtcggcgagctgctct 6292601 Query: 422 gccatgtcggcgacaccagggccgtcgttg 451 || | | ||||||||||||||| ||||||| Sbjct: 6292602 gcgacgccggcgacaccagggctgtcgttg 6292631 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgcg 362 |||||| |||||||||||||| || ||||||| ||||| |||||| ||| |||| ||| Sbjct: 416825 gctggtggtggactgcacggcggaaggggtggcattcgtcgaggccgacgccgacgtgcg 416766 Query: 363 cctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagttgttgtg 422 || || ||| ||||||| ||| |||||||||||| ||| |||||||||| | ||||||| Sbjct: 416765 gctagaggagctcggcgagccgttgctgccgccgttcccgtgcgtggaggtgctgttgtg 416706 Query: 423 ccatgtcggcgaca 436 | ||| |||||||| Sbjct: 416705 cgatgccggcgaca 416692 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 225 catcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccggctcag 284 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct: 6292390 catcagggcggcgctcgcggaggcgctggtgtactactaccccgtcgccggccggctgag 6292449 Query: 285 ggagg 289 ||||| Sbjct: 6292450 ggagg 6292454 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||||| ||||| |||||||| || ||||||||||||||||||||| Sbjct: 2066794 gctggtggtggagtgcacggcggaaggggtggtgttcgtggaggcc 2066839 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||||| ||||| |||||||| || |||||||| |||||||||||| Sbjct: 2053571 gctggttgtggagtgcacggcggaaggggtggttttcgtggaggcc 2053616 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Plus Query: 224 tcatcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccg 278 ||||||| ||||||||| ||||||||||||| || ||||||| | |||||||| Sbjct: 2066691 tcatcagagcggcgctggcggaggcgctggtgagcttctacccgctggccggccg 2066745 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 gggaggcgctggtgtactactaccc 266 |||||||||| |||||||||||||| Sbjct: 447784 gggaggcgctcgtgtactactaccc 447808 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggaggcgctggtgtactactaccc 266 ||||||||| |||||||||||||| Sbjct: 435210 ggaggcgctcgtgtactactaccc 435233
>dbj|AK100207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042A21, full insert sequence Length = 2209 Score = 119 bits (60), Expect = 8e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 50 tggtgaccttcacggcccgccggagcgagccggagcagctgcgcccggcgcgggcgactc 109 ||||||||||||| | |||||||||||||||| || ||| || |||||| || |||| | Sbjct: 429 tggtgaccttcacatctcgccggagcgagccggtgctgctccggccggcgaggccgacgc 488 Query: 110 cgcgggagaccaaggccctgtcggacctcgacgatcagcgcacgctgcgctactacgaga 169 |||||||||| ||| || || ||||||||||| ||||| |||||||| |||||||||| Sbjct: 489 cgcgggagacgaagcagctctccgacctcgacgaccagcggacgctgcggtactacgaga 548 Query: 170 cggtgatcggcttcttccgc 189 ||||| |||||||||||||| Sbjct: 549 cggtggtcggcttcttccgc 568 Score = 115 bits (58), Expect = 1e-22 Identities = 127/150 (84%) Strand = Plus / Plus Query: 302 ggctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgc 361 ||||||| ||||||||||||||||| ||||||||||||||||||||| ||| |||| || Sbjct: 717 ggctggtggtggactgcacggccgaaggggtggtgttcgtggaggccgacgccgacgtgc 776 Query: 362 gcctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagttgttgt 421 | || || || |||||| | |||||||||||||||||||| ||||| | ||| || | | Sbjct: 777 ggctggaggacttcggccagccgctgctgccgccgtacccgtgcgtcggcgagctgctct 836 Query: 422 gccatgtcggcgacaccagggccgtcgttg 451 || | | ||||||||||||||| ||||||| Sbjct: 837 gcgacgccggcgacaccagggctgtcgttg 866 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 225 catcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccggctcag 284 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct: 625 catcagggcggcgctcgcggaggcgctggtgtactactaccccgtcgccggccggctgag 684 Query: 285 ggagg 289 ||||| Sbjct: 685 ggagg 689
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 119 bits (60), Expect = 8e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 50 tggtgaccttcacggcccgccggagcgagccggagcagctgcgcccggcgcgggcgactc 109 ||||||||||||| | |||||||||||||||| || ||| || |||||| || |||| | Sbjct: 6293780 tggtgaccttcacatctcgccggagcgagccggtgctgctccggccggcgaggccgacgc 6293839 Query: 110 cgcgggagaccaaggccctgtcggacctcgacgatcagcgcacgctgcgctactacgaga 169 |||||||||| ||| || || ||||||||||| ||||| |||||||| |||||||||| Sbjct: 6293840 cgcgggagacgaagcagctctccgacctcgacgaccagcggacgctgcggtactacgaga 6293899 Query: 170 cggtgatcggcttcttccgc 189 ||||| |||||||||||||| Sbjct: 6293900 cggtggtcggcttcttccgc 6293919 Score = 115 bits (58), Expect = 1e-22 Identities = 127/150 (84%) Strand = Plus / Plus Query: 302 ggctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgc 361 ||||||| ||||||||||||||||| ||||||||||||||||||||| ||| |||| || Sbjct: 6294068 ggctggtggtggactgcacggccgaaggggtggtgttcgtggaggccgacgccgacgtgc 6294127 Query: 362 gcctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagttgttgt 421 | || || || |||||| | |||||||||||||||||||| ||||| | ||| || | | Sbjct: 6294128 ggctggaggacttcggccagccgctgctgccgccgtacccgtgcgtcggcgagctgctct 6294187 Query: 422 gccatgtcggcgacaccagggccgtcgttg 451 || | | ||||||||||||||| ||||||| Sbjct: 6294188 gcgacgccggcgacaccagggctgtcgttg 6294217 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgcg 362 |||||| |||||||||||||| || ||||||| ||||| |||||| ||| |||| ||| Sbjct: 416822 gctggtggtggactgcacggcggaaggggtggcattcgtcgaggccgacgccgacgtgcg 416763 Query: 363 cctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagttgttgtg 422 || || ||| ||||||| ||| |||||||||||| ||| |||||||||| | ||||||| Sbjct: 416762 gctagaggagctcggcgagccgttgctgccgccgttcccgtgcgtggaggtgctgttgtg 416703 Query: 423 ccatgtcggcgaca 436 | ||| |||||||| Sbjct: 416702 cgatgccggcgaca 416689 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 225 catcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccggctcag 284 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct: 6293976 catcagggcggcgctcgcggaggcgctggtgtactactaccccgtcgccggccggctgag 6294035 Query: 285 ggagg 289 ||||| Sbjct: 6294036 ggagg 6294040 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||||| ||||| |||||||| || ||||||||||||||||||||| Sbjct: 2066745 gctggtggtggagtgcacggcggaaggggtggtgttcgtggaggcc 2066790 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||||| ||||| |||||||| || |||||||| |||||||||||| Sbjct: 2053522 gctggttgtggagtgcacggcggaaggggtggttttcgtggaggcc 2053567 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Plus Query: 224 tcatcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccg 278 ||||||| ||||||||| ||||||||||||| || ||||||| | |||||||| Sbjct: 2066642 tcatcagagcggcgctggcggaggcgctggtgagcttctacccgctggccggccg 2066696 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 gggaggcgctggtgtactactaccc 266 |||||||||| |||||||||||||| Sbjct: 447781 gggaggcgctcgtgtactactaccc 447805 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggaggcgctggtgtactactaccc 266 ||||||||| |||||||||||||| Sbjct: 435207 ggaggcgctcgtgtactactaccc 435230
>ref|NM_194522.1| Oryza sativa (japonica cultivar-group) putative hsr201 hypersensitivity-related protein (OSJNBa0065H03.4), mRNA Length = 1350 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgcg 362 |||||| |||||||||||||| || ||||||| ||||| |||||| ||| |||| ||| Sbjct: 183 gctggtggtggactgcacggcggaaggggtggcattcgtcgaggccgacgccgacgtgcg 242 Query: 363 cctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagttgttgtg 422 || || ||| ||||||| ||| |||||||||||| ||| |||||||||| | ||||||| Sbjct: 243 gctagaggagctcggcgagccgttgctgccgccgttcccgtgcgtggaggtgctgttgtg 302 Query: 423 ccatgtcggcgaca 436 | ||| |||||||| Sbjct: 303 cgatgccggcgaca 316
>gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0065H03, complete sequence Length = 141017 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgcg 362 |||||| |||||||||||||| || ||||||| ||||| |||||| ||| |||| ||| Sbjct: 20999 gctggtggtggactgcacggcggaaggggtggcattcgtcgaggccgacgccgacgtgcg 20940 Query: 363 cctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagttgttgtg 422 || || ||| ||||||| ||| |||||||||||| ||| |||||||||| | ||||||| Sbjct: 20939 gctagaggagctcggcgagccgttgctgccgccgttcccgtgcgtggaggtgctgttgtg 20880 Query: 423 ccatgtcggcgaca 436 | ||| |||||||| Sbjct: 20879 cgatgccggcgaca 20866 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 gggaggcgctggtgtactactaccc 266 |||||||||| |||||||||||||| Sbjct: 51958 gggaggcgctcgtgtactactaccc 51982 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggaggcgctggtgtactactaccc 266 ||||||||| |||||||||||||| Sbjct: 39384 ggaggcgctcgtgtactactaccc 39407
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgcg 362 |||||| |||||||||||||| || ||||||| ||||| |||||| ||| |||| ||| Sbjct: 416825 gctggtggtggactgcacggcggaaggggtggcattcgtcgaggccgacgccgacgtgcg 416766 Query: 363 cctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagttgttgtg 422 || || ||| ||||||| ||| |||||||||||| ||| |||||||||| | ||||||| Sbjct: 416765 gctagaggagctcggcgagccgttgctgccgccgttcccgtgcgtggaggtgctgttgtg 416706 Query: 423 ccatgtcggcgaca 436 | ||| |||||||| Sbjct: 416705 cgatgccggcgaca 416692 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||||| ||||| |||||||| || ||||||||||||||||||||| Sbjct: 2066794 gctggtggtggagtgcacggcggaaggggtggtgttcgtggaggcc 2066839 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||||| ||||| |||||||| || |||||||| |||||||||||| Sbjct: 2053571 gctggttgtggagtgcacggcggaaggggtggttttcgtggaggcc 2053616 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Plus Query: 224 tcatcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccg 278 ||||||| ||||||||| ||||||||||||| || ||||||| | |||||||| Sbjct: 2066691 tcatcagagcggcgctggcggaggcgctggtgagcttctacccgctggccggccg 2066745 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 gggaggcgctggtgtactactaccc 266 |||||||||| |||||||||||||| Sbjct: 447784 gggaggcgctcgtgtactactaccc 447808 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggaggcgctggtgtactactaccc 266 ||||||||| |||||||||||||| Sbjct: 435210 ggaggcgctcgtgtactactaccc 435233
>ref|XM_477723.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1410 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgcg 362 ||||| ||||||||||||||| || ||||||| |||||| |||||| || |||| ||| Sbjct: 285 gctggccgtggactgcacggcggaaggggtggcgttcgtcgaggccaccgccgacgtgcg 344 Query: 363 cctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagtt 416 || || ||| ||||||| ||||||||||||||||| || || || |||||||| Sbjct: 345 gctggaggagctcggcgagccgctgctgccgccgtatccgtgtgtcgaggagtt 398 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 58 ttcacggcccgccggagcgagccggagcagctgcgcccggcgcgggcgactccgcgggag 117 |||||||| ||||||||| |||||||| | || ||||| || |||| || || ||| Sbjct: 13 ttcacggcacgccggagctcgccggagctggtgacgccggctaggccgacgccacgtgag 72 Query: 118 accaaggccctgtcggacctcgacgatcagcgcacgctgcgctactacgagac 170 |||||| ||||| ||||||||||| ||| | |||||||||||||||||||| Sbjct: 73 accaagctgctgtccgacctcgacgaccagtggacgctgcgctactacgagac 125
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgcg 362 ||||| ||||||||||||||| || ||||||| |||||| |||||| || |||| ||| Sbjct: 13502888 gctggccgtggactgcacggcggaaggggtggcgttcgtcgaggccaccgccgacgtgcg 13502947 Query: 363 cctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagtt 416 || || ||| ||||||| ||||||||||||||||| || || || |||||||| Sbjct: 13502948 gctggaggagctcggcgagccgctgctgccgccgtatccgtgtgtcgaggagtt 13503001 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 58 ttcacggcccgccggagcgagccggagcagctgcgcccggcgcgggcgactccgcgggag 117 |||||||| ||||||||| |||||||| | || ||||| || |||| || || ||| Sbjct: 13502616 ttcacggcacgccggagctcgccggagctggtgacgccggctaggccgacgccacgtgag 13502675 Query: 118 accaaggccctgtcggacctcgacgatcagcgcacgctgcgctactacgagac 170 |||||| ||||| ||||||||||| ||| | |||||||||||||||||||| Sbjct: 13502676 accaagctgctgtccgacctcgacgaccagtggacgctgcgctactacgagac 13502728 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 259 tactacccgatcgccggccggctcagggagg 289 ||||||||| ||||||| ||||||||||||| Sbjct: 8066449 tactacccgttcgccgggcggctcagggagg 8066419
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgcg 362 ||||| ||||||||||||||| || ||||||| |||||| |||||| || |||| ||| Sbjct: 82571 gctggccgtggactgcacggcggaaggggtggcgttcgtcgaggccaccgccgacgtgcg 82630 Query: 363 cctcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggagtt 416 || || ||| ||||||| ||||||||||||||||| || || || |||||||| Sbjct: 82631 gctggaggagctcggcgagccgctgctgccgccgtatccgtgtgtcgaggagtt 82684 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 58 ttcacggcccgccggagcgagccggagcagctgcgcccggcgcgggcgactccgcgggag 117 |||||||| ||||||||| |||||||| | || ||||| || |||| || || ||| Sbjct: 82299 ttcacggcacgccggagctcgccggagctggtgacgccggctaggccgacgccacgtgag 82358 Query: 118 accaaggccctgtcggacctcgacgatcagcgcacgctgcgctactacgagac 170 |||||| ||||| ||||||||||| ||| | |||||||||||||||||||| Sbjct: 82359 accaagctgctgtccgacctcgacgaccagtggacgctgcgctactacgagac 82411
>gb|BT018931.1| Zea mays clone Contig63.F mRNA sequence Length = 1525 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 245 aggcgctggtgtactactacccgatcgccggccggctcagggaggacggcgcggggaggc 304 |||| ||||||||||||||||| ||||||||||| |||||||||| | | |||| || Sbjct: 223 aggccctggtgtactactacccaatcgccggccgtctcagggaggtctccaaagggaagc 282 Query: 305 tggtcgtggactgcacggccgagggggtggtgttcgtggaggcctacgtggacgcgcgcc 364 ||| ||||| |||| | || || |||||||||||||| ||| | | || | ||| | Sbjct: 283 tggcggtggagtgcagcggagaaggagtggtgttcgtggatgcccatgccgatgtgcggc 342 Query: 365 tcgacgagttcggcgacccgctgctgccgccgtacccttgcgtggaggag 414 | |||||| | || || |||||||||||||||||||||||| | |||||| Sbjct: 343 tagacgagcttggtgagccgctgctgccgccgtacccttgcattgaggag 392 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Plus Query: 47 ccatggtgaccttcacggcccgccggagcgagccggagc 85 ||||||||||||||| ||| | ||||||||| ||||||| Sbjct: 4 ccatggtgaccttcaaggcacaccggagcgatccggagc 42
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 225 catcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccg 278 |||||||||||| || |||||| ||||||||||||||||||||||||||||| Sbjct: 16100066 catcagggcggccctcgcggaggccctggtgtactactacccgatcgccggccg 16100013 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 225 catcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccg 278 |||||||||||| || |||||| ||||||||||||||||||||||||||||| Sbjct: 16018664 catcagggcggccctcgcggaggctctggtgtactactacccgatcgccggccg 16018611 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 244 gaggcgctggtgtactactacccgatcgccggccg 278 ||||| ||||||||||||||||||||||||||||| Sbjct: 16097946 gaggccctggtgtactactacccgatcgccggccg 16097912 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 243 ggaggcgctggtgtactactacccgatcgccggccg 278 |||||| || |||||||||||||||||||||||||| Sbjct: 16050512 ggaggccctcgtgtactactacccgatcgccggccg 16050477 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 309 cgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| ||||| ||||| |||||||||||||||||||| Sbjct: 16097878 cgtggagtgcaccgccgaaggggtggtgttcgtggaggc 16097840 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 309 cgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| ||||| | ||| |||||||||||||||||||| Sbjct: 16127131 cgtggagtgcaccggcgaaggggtggtgttcgtggaggc 16127093 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 309 cgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| ||||| | ||| |||||||||||||||||||| Sbjct: 16018577 cgtggagtgcaccggcgaaggggtggtgttcgtggaggc 16018539 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 244 gaggcgctggtgtactactacccgatcgccgg 275 ||||| || ||||||||||||||||| ||||| Sbjct: 16127196 gaggccctcgtgtactactacccgatggccgg 16127165
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 225 catcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccg 278 |||||||||||| || |||||| ||||||||||||||||||||||||||||| Sbjct: 16053299 catcagggcggccctcgcggaggccctggtgtactactacccgatcgccggccg 16053246 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 225 catcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccg 278 |||||||||||| || |||||| ||||||||||||||||||||||||||||| Sbjct: 15971897 catcagggcggccctcgcggaggctctggtgtactactacccgatcgccggccg 15971844 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 244 gaggcgctggtgtactactacccgatcgccggccg 278 ||||| ||||||||||||||||||||||||||||| Sbjct: 16051179 gaggccctggtgtactactacccgatcgccggccg 16051145 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 243 ggaggcgctggtgtactactacccgatcgccggccg 278 |||||| || |||||||||||||||||||||||||| Sbjct: 16003745 ggaggccctcgtgtactactacccgatcgccggccg 16003710 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 309 cgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| ||||| ||||| |||||||||||||||||||| Sbjct: 16051111 cgtggagtgcaccgccgaaggggtggtgttcgtggaggc 16051073 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 309 cgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| ||||| | ||| |||||||||||||||||||| Sbjct: 16080364 cgtggagtgcaccggcgaaggggtggtgttcgtggaggc 16080326 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 309 cgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| ||||| | ||| |||||||||||||||||||| Sbjct: 15971810 cgtggagtgcaccggcgaaggggtggtgttcgtggaggc 15971772 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 244 gaggcgctggtgtactactacccgatcgccgg 275 ||||| || ||||||||||||||||| ||||| Sbjct: 16080429 gaggccctcgtgtactactacccgatggccgg 16080398
>emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa0060H23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153350 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 225 catcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccg 278 |||||||||||| || |||||| ||||||||||||||||||||||||||||| Sbjct: 86077 catcagggcggccctcgcggaggctctggtgtactactacccgatcgccggccg 86024 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 243 ggaggcgctggtgtactactacccgatcgccggccg 278 |||||| || |||||||||||||||||||||||||| Sbjct: 117925 ggaggccctcgtgtactactacccgatcgccggccg 117890 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 309 cgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| ||||| | ||| |||||||||||||||||||| Sbjct: 85990 cgtggagtgcaccggcgaaggggtggtgttcgtggaggc 85952
>emb|BX649219.2|CNS09SBY Oryza sativa chromosome 12, . BAC B1097F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165955 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 225 catcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccg 278 |||||||||||| || |||||| ||||||||||||||||||||||||||||| Sbjct: 143277 catcagggcggccctcgcggaggccctggtgtactactacccgatcgccggccg 143330 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 244 gaggcgctggtgtactactacccgatcgccggccg 278 ||||| ||||||||||||||||||||||||||||| Sbjct: 145397 gaggccctggtgtactactacccgatcgccggccg 145431 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 309 cgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| ||||| ||||| |||||||||||||||||||| Sbjct: 145465 cgtggagtgcaccgccgaaggggtggtgttcgtggaggc 145503 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Plus Query: 309 cgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| ||||| | ||| |||||||||||||||||||| Sbjct: 116212 cgtggagtgcaccggcgaaggggtggtgttcgtggaggc 116250 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 244 gaggcgctggtgtactactacccgatcgccgg 275 ||||| || ||||||||||||||||| ||||| Sbjct: 116147 gaggccctcgtgtactactacccgatggccgg 116178
>ref|NM_194749.1| Oryza sativa (japonica cultivar-group) putative hsr201 hypersensitivity-related protein (OSJNBa0013J21.8), mRNA Length = 522 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||||| ||||| |||||||| || ||||||||||||||||||||| Sbjct: 315 gctggtggtggagtgcacggcggaaggggtggtgttcgtggaggcc 360 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Plus Query: 224 tcatcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccg 278 ||||||| ||||||||| ||||||||||||| || ||||||| | |||||||| Sbjct: 212 tcatcagagcggcgctggcggaggcgctggtgagcttctacccgctggccggccg 266
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||||| ||||| |||||||| || ||||||||||||||||||||| Sbjct: 44934 gctggtggtggagtgcacggcggaaggggtggtgttcgtggaggcc 44979 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||||| ||||| |||||||| || |||||||| |||||||||||| Sbjct: 31711 gctggttgtggagtgcacggcggaaggggtggttttcgtggaggcc 31756 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Plus Query: 224 tcatcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccg 278 ||||||| ||||||||| ||||||||||||| || ||||||| | |||||||| Sbjct: 44831 tcatcagagcggcgctggcggaggcgctggtgagcttctacccgctggccggccg 44885
>dbj|AK066866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088O08, full insert sequence Length = 1766 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||||| ||||| |||||||| || ||||||||||||||||||||| Sbjct: 363 gctggtggtggagtgcacggcggaaggggtggtgttcgtggaggcc 408 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Plus Query: 224 tcatcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccg 278 ||||||| ||||||||| ||||||||||||| || ||||||| | |||||||| Sbjct: 260 tcatcagagcggcgctggcggaggcgctggtgagcttctacccgctggccggccg 314
>dbj|AK065433.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013024J06, full insert sequence Length = 1827 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 243 ggaggcgctggtgtactactacccgatcgccggccg 278 |||||| || |||||||||||||||||||||||||| Sbjct: 330 ggaggccctcgtgtactactacccgatcgccggccg 365
>ref|NM_184024.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1368 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 246 ggcgctggtgtactactacccgatcgccggccggctcagggaggacggcgcggggaggct 305 |||||||||| ||||||||||| |||||||| |||| || |||| | | ||| ||| Sbjct: 222 ggcgctggtgcactactacccgctcgccggcaggctgagagaggtggaaggacggaagct 281 Query: 306 ggtcgtggactgcacggccgagggggtggtgttcgtggaggc 347 ||| | ||||||| | |||||||||||||||||||||||| Sbjct: 282 ggtgatcgactgcagcggcgagggggtggtgttcgtggaggc 323
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||||| ||||| |||||||| || |||||||| |||||||||||| Sbjct: 144300 gctggttgtggagtgcacggcggaaggggtggttttcgtggaggcc 144345
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 246 ggcgctggtgtactactacccgatcgccggccggctcagggaggacggcgcggggaggct 305 |||||||||| ||||||||||| |||||||| |||| || |||| | | ||| ||| Sbjct: 13940640 ggcgctggtgcactactacccgctcgccggcaggctgagagaggtggaaggacggaagct 13940699 Query: 306 ggtcgtggactgcacggccgagggggtggtgttcgtggaggc 347 ||| | ||||||| | |||||||||||||||||||||||| Sbjct: 13940700 ggtgatcgactgcagcggcgagggggtggtgttcgtggaggc 13940741 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 305 tggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||| ||||||||||| | |||||||||| ||||||||||||| Sbjct: 24392551 tggtggtggactgcaccggcgagggggtgtggttcgtggaggcc 24392508 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 234 ggcgctgagggaggcgctggtgtactactacccgatcgc 272 ||||||| || ||||||||||| ||||||||||| |||| Sbjct: 10563092 ggcgctggggaaggcgctggtggactactacccgttcgc 10563054 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccggagcgagccggagcagct 89 ||||||| |||||||||||||||| Sbjct: 27950316 ccgccggcgcgagccggagcagct 27950293
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 246 ggcgctggtgtactactacccgatcgccggccggctcagggaggacggcgcggggaggct 305 |||||||||| ||||||||||| |||||||| |||| || |||| | | ||| ||| Sbjct: 100942 ggcgctggtgcactactacccgctcgccggcaggctgagagaggtggaaggacggaagct 101001 Query: 306 ggtcgtggactgcacggccgagggggtggtgttcgtggaggc 347 ||| | ||||||| | |||||||||||||||||||||||| Sbjct: 101002 ggtgatcgactgcagcggcgagggggtggtgttcgtggaggc 101043
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 246 ggcgctggtgtactactacccgatcgccggccggctcagggaggacggcgcggggaggct 305 |||||||||| ||||||||||| |||||||| |||| || |||| | | ||| ||| Sbjct: 16385 ggcgctggtgcactactacccgctcgccggcaggctgagagaggtggaaggacggaagct 16444 Query: 306 ggtcgtggactgcacggccgagggggtggtgttcgtggaggc 347 ||| | ||||||| | |||||||||||||||||||||||| Sbjct: 16445 ggtgatcgactgcagcggcgagggggtggtgttcgtggaggc 16486
>dbj|AK071594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102H06, full insert sequence Length = 1713 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 246 ggcgctggtgtactactacccgatcgccggccggctcagggaggacggcgcggggaggct 305 |||||||||| ||||||||||| |||||||| |||| || |||| | | ||| ||| Sbjct: 249 ggcgctggtgcactactacccgctcgccggcaggctgagagaggtggaaggacggaagct 308 Query: 306 ggtcgtggactgcacggccgagggggtggtgttcgtggaggc 347 ||| | ||||||| | |||||||||||||||||||||||| Sbjct: 309 ggtgatcgactgcagcggcgagggggtggtgttcgtggaggc 350
>ref|NM_192784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1341 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 305 tggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||| ||||||||||| | |||||||||| ||||||||||||| Sbjct: 317 tggtggtggactgcaccggcgagggggtgtggttcgtggaggcc 360
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 305 tggtcgtggactgcacggccgagggggtggtgttcgtggaggcc 348 |||| ||||||||||| | |||||||||| ||||||||||||| Sbjct: 138455 tggtggtggactgcaccggcgagggggtgtggttcgtggaggcc 138412
>ref|NM_183607.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 453 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Plus Query: 234 ggcgctgagggaggcgctggtgtactactacccgatcgc 272 ||||||| || ||||||||||| ||||||||||| |||| Sbjct: 204 ggcgctggggaaggcgctggtggactactacccgttcgc 242
>ref|NM_186830.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1739 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 259 tactacccgatcgccggccggctcagggagg 289 ||||||||| ||||||| ||||||||||||| Sbjct: 281 tactacccgttcgccgggcggctcagggagg 311
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 234 ggcgctgagggaggcgctggtgtactactacccgatcgc 272 ||||||| || ||||||||||| ||||||||||| |||| Sbjct: 57715 ggcgctggggaaggcgctggtggactactacccgttcgc 57677
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 259 tactacccgatcgccggccggctcagggagg 289 ||||||||| ||||||| ||||||||||||| Sbjct: 104646 tactacccgttcgccgggcggctcagggagg 104616
>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_C08 Length = 117923 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 259 tactacccgatcgccggccggctcagggagg 289 ||||||||| ||||||| ||||||||||||| Sbjct: 221 tactacccgttcgccgggcggctcagggagg 191
>dbj|AK109746.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-F02, full insert sequence Length = 1739 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 259 tactacccgatcgccggccggctcagggagg 289 ||||||||| ||||||| ||||||||||||| Sbjct: 281 tactacccgttcgccgggcggctcagggagg 311
>dbj|AK070443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D03, full insert sequence Length = 1655 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Plus Query: 234 ggcgctgagggaggcgctggtgtactactacccgatcgc 272 ||||||| || ||||||||||| ||||||||||| |||| Sbjct: 311 ggcgctggggaaggcgctggtggactactacccgttcgc 349
>dbj|AK060689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A09, full insert sequence Length = 1553 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Plus Query: 234 ggcgctgagggaggcgctggtgtactactacccgatcgc 272 ||||||| || ||||||||||| ||||||||||| |||| Sbjct: 206 ggcgctggggaaggcgctggtggactactacccgttcgc 244
>ref|XM_475572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1311 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 226 atcagggcggcgctgagggaggcgctggtgtactactacccgatcgccgg 275 ||||||| ||||||| || ||||||||||| | ||| ||||| ||||||| Sbjct: 181 atcagggaggcgctggggaaggcgctggtggagtaccacccgttcgccgg 230
>ref|XM_473108.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 ggcgctggtgtactactacccgatcgccgg 275 |||||| ||| ||||||||||||||||||| Sbjct: 204 ggcgctcgtgcactactacccgatcgccgg 233
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 246 ggcgctggtgtactactacccgatcgccgg 275 |||||| ||| ||||||||||||||||||| Sbjct: 105487 ggcgctcgtgcactactacccgatcgccgg 105458
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 246 ggcgctggtgtactactacccgatcgccgg 275 |||||| ||| ||||||||||||||||||| Sbjct: 48107 ggcgctcgtgcactactacccgatcgccgg 48078
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 246 ggcgctggtgtactactacccgatcgccgg 275 |||||| ||| ||||||||||||||||||| Sbjct: 25321548 ggcgctcgtgcactactacccgatcgccgg 25321519 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ctggtgtactactacccgatcgccggccg 278 ||||| ||||||||||| ||||||||||| Sbjct: 6436842 ctggtctactactaccccatcgccggccg 6436870 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 250 ctggtgtactactacccgatcgccggccg 278 ||||| ||||||||||| ||||||||||| Sbjct: 5117770 ctggtctactactaccccatcgccggccg 5117742 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 ggtgttcgtggaggcctacgtgga 356 |||||||||||||| ||||||||| Sbjct: 21342171 ggtgttcgtggaggactacgtgga 21342148
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 226 atcagggcggcgctgagggaggcgctggtgtactactacccgatcgccgg 275 ||||||| ||||||| || ||||||||||| | ||| ||||| ||||||| Sbjct: 2083776 atcagggaggcgctggggaaggcgctggtggagtaccacccgttcgccgg 2083825 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 226 atcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccggctc 282 |||||||||||||| |||||||| || ||| ||||||| |||||||||||||| Sbjct: 14439670 atcagggcggcgctctctgaggcgctcgtacacttctacccgctcgccggccggctc 14439726 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 243 ggaggcgctggtgtactactacccgatcgccggccg 278 ||||||||| || ||||||||||| |||||||||| Sbjct: 3209021 ggaggcgctcgtccactactacccgctcgccggccg 3209056
>dbj|AK106972.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-G06, full insert sequence Length = 867 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 226 atcagggcggcgctgagggaggcgctggtgtactactacccgatcgccgg 275 ||||||| ||||||| || ||||||||||| | ||| ||||| ||||||| Sbjct: 487 atcagggaggcgctggggaaggcgctggtggagtaccacccgttcgccgg 438
>dbj|AK069868.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039O14, full insert sequence Length = 1730 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 226 atcagggcggcgctgagggaggcgctggtgtactactacccgatcgccgg 275 ||||||| ||||||| || ||||||||||| | ||| ||||| ||||||| Sbjct: 281 atcagggaggcgctggggaaggcgctggtggagtaccacccgttcgccgg 330
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 gagcgagccggagcagctgcgc 93 |||||||||||||||||||||| Sbjct: 686654 gagcgagccggagcagctgcgc 686675
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 226 atcagggcggcgctgagggaggcgctggtgtactactacccgatcgccgg 275 ||||||| ||||||| || ||||||||||| | ||| ||||| ||||||| Sbjct: 50617 atcagggaggcgctggggaaggcgctggtggagtaccacccgttcgccgg 50666
>ref|XM_474639.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1296 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ctggtgtactactacccgatcgccggccg 278 ||||| ||||||||||| ||||||||||| Sbjct: 199 ctggtctactactaccccatcgccggccg 227
>ref|XM_474776.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1326 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ctggtgtactactacccgatcgccggccg 278 ||||| ||||||||||| ||||||||||| Sbjct: 202 ctggtctactactaccccatcgccggccg 230
>ref|XM_469115.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1371 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| || |||||||||| || |||||||| ||||||||||| Sbjct: 264 gctggtagtagactgcacggtagaaggggtggttttcgtggaggc 308
>ref|NM_194527.1| Oryza sativa (japonica cultivar-group) putative hsr201 hypersensitivity-related protein (OSJNBa0065H03.9), mRNA Length = 1608 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 gggaggcgctggtgtactactaccc 266 |||||||||| |||||||||||||| Sbjct: 212 gggaggcgctcgtgtactactaccc 236
>gb|AC104712.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1333_C12, complete sequence Length = 102029 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 226 atcagggcggcgctgagggaggcgctggtgtactactacccgatcgccggccggctc 282 |||||||||||||| |||||||| || ||| ||||||| |||||||||||||| Sbjct: 70378 atcagggcggcgctctctgaggcgctcgtacacttctacccgctcgccggccggctc 70434
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| || |||||||||| || |||||||| ||||||||||| Sbjct: 25545923 gctggtagtagactgcacggtagaaggggtggttttcgtggaggc 25545967 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 gcgcccggcgcgggcgactcc 110 ||||||||||||||||||||| Sbjct: 3013847 gcgcccggcgcgggcgactcc 3013867
>gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genomic sequence, complete sequence Length = 167427 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| || |||||||||| || |||||||| ||||||||||| Sbjct: 156428 gctggtagtagactgcacggtagaaggggtggttttcgtggaggc 156384
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 250 ctggtgtactactacccgatcgccggccg 278 ||||| ||||||||||| ||||||||||| Sbjct: 94043 ctggtctactactaccccatcgccggccg 94015
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 gcgcccggcgcgggcgactcc 110 ||||||||||||||||||||| Sbjct: 82414 gcgcccggcgcgggcgactcc 82394
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cgcacgctgcgctactacgag 168 ||||||||||||||||||||| Sbjct: 191811 cgcacgctgcgctactacgag 191791
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 gcgcccggcgcgggcgactcc 110 ||||||||||||||||||||| Sbjct: 151338 gcgcccggcgcgggcgactcc 151358
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 303 gctggtcgtggactgcacggccgagggggtggtgttcgtggaggc 347 |||||| || |||||||||| || |||||||| ||||||||||| Sbjct: 25637232 gctggtagtagactgcacggtagaaggggtggttttcgtggaggc 25637276 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 gcgcccggcgcgggcgactcc 110 ||||||||||||||||||||| Sbjct: 3013962 gcgcccggcgcgggcgactcc 3013982
>emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence Length = 147548 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ctggtgtactactacccgatcgccggccg 278 ||||| ||||||||||| ||||||||||| Sbjct: 98991 ctggtctactactaccccatcgccggccg 99019
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gcagctgcgcccggcgcggg 103 |||||||||||||||||||| Sbjct: 1066292 gcagctgcgcccggcgcggg 1066273
>ref|NM_185277.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 243 ggaggcgctggtgtactactacccgatcgccggccg 278 ||||||||| || ||||||||||| |||||||||| Sbjct: 204 ggaggcgctcgtccactactacccgctcgccggccg 239
>ref|NM_194525.1| Oryza sativa (japonica cultivar-group) putative hsr201 hypersensitivity-related protein (OSJNBa0065H03.7), mRNA Length = 1305 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggaggcgctggtgtactactaccc 266 ||||||||| |||||||||||||| Sbjct: 216 ggaggcgctcgtgtactactaccc 239
>ref|XM_464842.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1149 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 366 cgacgagttcggcgacccgctgctgccgccgt 397 ||||||||||||| |||||||||||||||| Sbjct: 273 cgacgagttcggcctgccgctgctgccgccgt 304
>ref|NM_192039.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1455 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccggagcgagccggagcagct 89 ||||||| |||||||||||||||| Sbjct: 121 ccgccggcgcgagccggagcagct 98
>ref|XM_472498.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1242 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 ggtgttcgtggaggcctacgtgga 356 |||||||||||||| ||||||||| Sbjct: 528 ggtgttcgtggaggactacgtgga 551
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 243 ggaggcgctggtgtactactacccgatcgccggccg 278 ||||||||| || ||||||||||| |||||||||| Sbjct: 86738 ggaggcgctcgtccactactacccgctcgccggccg 86773
>gb|AY657654.1| Synthetic construct Peudomonas aeruginosa clone FLH041467.01F PA0853 gene, partial cds Length = 624 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gcagcaacgccggcaggccg 207 |||||||||||||||||||| Sbjct: 319 gcagcaacgccggcaggccg 300
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gacggtgatcggcttcttcc 187 |||||||||||||||||||| Sbjct: 3496174 gacggtgatcggcttcttcc 3496193
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 ggtgttcgtggaggcctacgtgga 356 |||||||||||||| ||||||||| Sbjct: 155645 ggtgttcgtggaggactacgtgga 155622
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 tcgacgagttcggcgacccg 384 |||||||||||||||||||| Sbjct: 102583 tcgacgagttcggcgacccg 102602
>gb|DQ378290.1| Drosophila virilis strain Tucson 15010-1001.10 fosmid 10J19, complete sequence Length = 34783 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gagcgagccggagcagctgc 91 |||||||||||||||||||| Sbjct: 11342 gagcgagccggagcagctgc 11323
>gb|U43598.2|MAU43598 Mycobacterium avium medium chain acyl-CoA synthetase (mig) gene, complete cds Length = 2809 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 tcggcgacccgctgctgccgccgt 397 ||||| |||||||||||||||||| Sbjct: 117 tcggccacccgctgctgccgccgt 140
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctactacccgatcgccggccggct 281 ||||||||| |||||||||||||| Sbjct: 23055450 ctactaccccatcgccggccggct 23055473
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 366 cgacgagttcggcgacccgctgctgccgccgt 397 ||||||||||||| |||||||||||||||| Sbjct: 8501344 cgacgagttcggcctgccgctgctgccgccgt 8501375
>gb|AE004520.1| Pseudomonas aeruginosa PAO1, section 81 of 529 of the complete genome Length = 12217 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gcagcaacgccggcaggccg 207 |||||||||||||||||||| Sbjct: 4625 gcagcaacgccggcaggccg 4644
>gb|AC069328.1|AC069328 Genomic Sequence For Arabidopsis thaliana Clone T28N17 From Chromosome V, complete sequence Length = 75593 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gcagtgcgacaaagttggat 22 |||||||||||||||||||| Sbjct: 6203 gcagtgcgacaaagttggat 6222
>gb|AC051627.4|AC051627 Genomic Sequence For Arabidopsis thaliana Clone T1A4 From Chromosome V, complete sequence Length = 85746 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gcagtgcgacaaagttggat 22 |||||||||||||||||||| Sbjct: 65239 gcagtgcgacaaagttggat 65258
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccggagcgagccggagcagct 89 ||||||| |||||||||||||||| Sbjct: 136997 ccgccggcgcgagccggagcagct 136974
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctactacccgatcgccggccggct 281 ||||||||| |||||||||||||| Sbjct: 121994 ctactaccccatcgccggccggct 122017
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 123 ggccctgtcggacctcgacgatcagcgc 150 ||||||||| | |||||||||||||||| Sbjct: 216935 ggccctgtccggcctcgacgatcagcgc 216908
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 cgcagcaacgccggcaggccggac 210 ||||||||||||||||||| |||| Sbjct: 4340332 cgcagcaacgccggcaggctggac 4340355
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctactacccgatcgccggccggct 281 ||||||||| |||||||||||||| Sbjct: 6098 ctactaccccatcgccggccggct 6121
>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011N12 Length = 158586 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 366 cgacgagttcggcgacccgctgctgccgccgt 397 ||||||||||||| |||||||||||||||| Sbjct: 154194 cgacgagttcggcctgccgctgctgccgccgt 154225
>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1113_G05 Length = 131445 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 366 cgacgagttcggcgacccgctgctgccgccgt 397 ||||||||||||| |||||||||||||||| Sbjct: 50614 cgacgagttcggcctgccgctgctgccgccgt 50645
>dbj|AK120657.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E04, full insert sequence Length = 1507 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ctactacccgatcgccggccggct 281 ||||||||| |||||||||||||| Sbjct: 304 ctactaccccatcgccggccggct 327
>emb|AJ234555.1|HVU234555 Hordeum vulgare genomic DNA fragment; clone MWG0799.uni Length = 496 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tcgccggccggctcagggag 288 |||||||||||||||||||| Sbjct: 294 tcgccggccggctcagggag 275
>dbj|AK070740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063N02, full insert sequence Length = 1662 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 ggtgttcgtggaggcctacgtgga 356 |||||||||||||| ||||||||| Sbjct: 697 ggtgttcgtggaggactacgtgga 720
>dbj|AK070671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056M20, full insert sequence Length = 3220 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 366 cgacgagttcggcgacccgctgctgccgccgt 397 ||||||||||||| |||||||||||||||| Sbjct: 728 cgacgagttcggcctgccgctgctgccgccgt 759
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gttcggcgacccgctgctgc 391 |||||||||||||||||||| Sbjct: 4566253 gttcggcgacccgctgctgc 4566234
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 tcggcgacccgctgctgccgccgt 397 ||||| |||||||||||||||||| Sbjct: 2673895 tcggccacccgctgctgccgccgt 2673918
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 cgacgagttcggcgacccgc 385 |||||||||||||||||||| Sbjct: 2575250 cgacgagttcggcgacccgc 2575231
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 243 ggaggcgctggtgtactactacccgatcgccggccg 278 ||||||||| || ||||||||||| |||||||||| Sbjct: 2845 ggaggcgctcgtccactactacccgctcgccggccg 2880 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,423,620 Number of Sequences: 3902068 Number of extensions: 2423620 Number of successful extensions: 55429 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 53498 Number of HSP's gapped (non-prelim): 1925 length of query: 453 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 431 effective length of database: 17,147,199,772 effective search space: 7390443101732 effective search space used: 7390443101732 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
