| Clone Name | bast57c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF444195.1| Oryza sativa malate dehydrogenase (MDH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1257 Score = 400 bits (202), Expect = e-108 Identities = 315/352 (89%), Gaps = 3/352 (0%) Strand = Plus / Plus Query: 110 atgaggtcctcggtgatgagatccgccgcgcagcttctccgccgccgcagc---tactcc 166 |||||| | ||| |||||||||||||| ||||| | |||||||||||| || |||||| Sbjct: 17 atgaggccgtcgctgatgagatccgcctcgcaggtcctccgccgccgccgcggctactcc 76 Query: 167 tccgcgtccgggcagcaggagcggaaggtggccatcctcggtgcggccggtggcatcggg 226 ||||| ||||| |||| |||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 77 tccgcctccggccagccggagcggaaggtcgccatcctcggcgcggccggcggcatcggg 136 Query: 227 cagccgctgtctctcctcatgaagctgaaccccctcgtctcctccctctccctctacgat 286 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 137 cagccgctctccctcctcatgaagctgaacccgctcgtctcctccctctccctctacgat 196 Query: 287 atcgcggccaccccgggcgtcgctgccgacgtttcccacatcaactcccctgccctggcc 346 ||||| | ||||||||||||||| |||||||| |||||||||||| |||| |||| || Sbjct: 197 atcgccggcaccccgggcgtcgccgccgacgtctcccacatcaacgccccggcccaggtg 256 Query: 347 aaggggttcatgggggacgatcagctcgcggaggcgttggatggggccgacctggtgatc 406 ||||||||||||||||| || ||||||| |||||||||||| ||| | ||| | |||||| Sbjct: 257 aaggggttcatgggggatgaccagctcggggaggcgttggaggggtcggacatcgtgatc 316 Query: 407 atcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 317 atcccggccggcgtgccgaggaagcccggcatgaccagggacgacctcttca 368
>ref|NM_192352.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1023 Score = 392 bits (198), Expect = e-106 Identities = 314/352 (89%), Gaps = 3/352 (0%) Strand = Plus / Plus Query: 110 atgaggtcctcggtgatgagatccgccgcgcagcttctccgccgccgcagc---tactcc 166 |||||| | ||| |||||||||||||| ||||| | |||||||||||| || |||||| Sbjct: 1 atgaggccgtcgctgatgagatccgcctcgcaggtcctccgccgccgccgcggctactcc 60 Query: 167 tccgcgtccgggcagcaggagcggaaggtggccatcctcggtgcggccggtggcatcggg 226 ||||| ||||| |||| |||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 61 tccgcctccggccagccggagcggaaggtcgccatcctcggcgcggccggcggcatcggg 120 Query: 227 cagccgctgtctctcctcatgaagctgaaccccctcgtctcctccctctccctctacgat 286 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 121 cagccgctctccctcctcatgaagctgaacccgctcgtctcctccctctccctctacgat 180 Query: 287 atcgcggccaccccgggcgtcgctgccgacgtttcccacatcaactcccctgccctggcc 346 ||||| | |||||| |||||||| |||||||| |||||||||||| |||| |||| || Sbjct: 181 atcgccggcacccccggcgtcgccgccgacgtctcccacatcaacgccccggcccaggtg 240 Query: 347 aaggggttcatgggggacgatcagctcgcggaggcgttggatggggccgacctggtgatc 406 ||||||||||||||||| || ||||||| |||||||||||| ||| | ||| | |||||| Sbjct: 241 aaggggttcatgggggatgaccagctcggggaggcgttggaggggtcggacatcgtgatc 300 Query: 407 atcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 301 atcccggccggcgtgccgaggaagcccggcatgaccagggacgacctcttca 352
>dbj|AK104770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A07, full insert sequence Length = 1279 Score = 392 bits (198), Expect = e-106 Identities = 314/352 (89%), Gaps = 3/352 (0%) Strand = Plus / Plus Query: 110 atgaggtcctcggtgatgagatccgccgcgcagcttctccgccgccgcagc---tactcc 166 |||||| | ||| |||||||||||||| ||||| | |||||||||||| || |||||| Sbjct: 59 atgaggccgtcgctgatgagatccgcctcgcaggtcctccgccgccgccgcggctactcc 118 Query: 167 tccgcgtccgggcagcaggagcggaaggtggccatcctcggtgcggccggtggcatcggg 226 ||||| ||||| |||| |||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 119 tccgcctccggccagccggagcggaaggtcgccatcctcggcgcggccggcggcatcggg 178 Query: 227 cagccgctgtctctcctcatgaagctgaaccccctcgtctcctccctctccctctacgat 286 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 179 cagccgctctccctcctcatgaagctgaacccgctcgtctcctccctctccctctacgat 238 Query: 287 atcgcggccaccccgggcgtcgctgccgacgtttcccacatcaactcccctgccctggcc 346 ||||| | |||||| |||||||| |||||||| |||||||||||| |||| |||| || Sbjct: 239 atcgccggcacccccggcgtcgccgccgacgtctcccacatcaacgccccggcccaggtg 298 Query: 347 aaggggttcatgggggacgatcagctcgcggaggcgttggatggggccgacctggtgatc 406 ||||||||||||||||| || ||||||| |||||||||||| ||| | ||| | |||||| Sbjct: 299 aaggggttcatgggggatgaccagctcggggaggcgttggaggggtcggacatcgtgatc 358 Query: 407 atcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 359 atcccggccggcgtgccgaggaagcccggcatgaccagggacgacctcttca 410
>dbj|AK071699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108E15, full insert sequence Length = 1369 Score = 385 bits (194), Expect = e-104 Identities = 313/352 (88%), Gaps = 3/352 (0%) Strand = Plus / Plus Query: 110 atgaggtcctcggtgatgagatccgccgcgcagcttctccgccgccgcagc---tactcc 166 |||||| | ||| |||||||||||||| ||||| | |||||||||||| || |||||| Sbjct: 133 atgaggccgtcgctgatgagatccgcctcgcaggtcctccgccgccgccgcggctactcc 192 Query: 167 tccgcgtccgggcagcaggagcggaaggtggccatcctcggtgcggccggtggcatcggg 226 ||||| ||||| |||| |||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 193 tccgcctccggccagccggagcggaaggtcgccatcctcggcgcggccggcggcatcggg 252 Query: 227 cagccgctgtctctcctcatgaagctgaaccccctcgtctcctccctctccctctacgat 286 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 253 cagccgctctccctcctcatgaagctgaacccgctcgtctcctccctctccctctacgat 312 Query: 287 atcgcggccaccccgggcgtcgctgccgacgtttcccacatcaactcccctgccctggcc 346 ||||| | |||||| |||||||| |||||||| |||||||||||| |||| |||| || Sbjct: 313 atcgccggcacccccggcgtcgccgccgacgtctcccacatcaacgccccggcccaggtg 372 Query: 347 aaggggttcatgggggacgatcagctcgcggaggcgttggatggggccgacctggtgatc 406 |||||||||||||||| || ||||||| |||||||||||| ||| | ||| | |||||| Sbjct: 373 gaggggttcatgggggatgaccagctcggggaggcgttggaggggtcggacatcgtgatc 432 Query: 407 atcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 433 atcccggccggcgtgccgaggaagcccggcatgaccagggacgacctcttca 484
>gb|BT016218.1| Zea mays clone Contig51 mRNA sequence Length = 1263 Score = 325 bits (164), Expect = 7e-86 Identities = 275/312 (88%) Strand = Plus / Plus Query: 147 tccgccgccgcagctactcctccgcgtccgggcagcaggagcggaaggtggccatcctcg 206 |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 1 tccgccgccggagctactcctccgcatccgggcagcccgagcggaaggtggccatcctcg 60 Query: 207 gtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccccctcgtct 266 | ||||| || |||||||||||||||||||| || ||||||||||| ||||| ||||||| Sbjct: 61 gggcggcggggggcatcgggcagccgctgtcgctgctcatgaagctcaacccactcgtct 120 Query: 267 cctccctctccctctacgatatcgcggccaccccgggcgtcgctgccgacgtttcccaca 326 |||||||||| |||||||||||||| | |||||| || ||||| |||||||| ||||||| Sbjct: 121 cctccctctcgctctacgatatcgccggcaccccaggtgtcgcggccgacgtctcccaca 180 Query: 327 tcaactcccctgccctggccaaggggttcatgggggacgatcagctcgcggaggcgttgg 386 |||||||||| ||||||| ||||| |||||||| || || ||||| | ||| ||| | | Sbjct: 181 tcaactcccccgccctggtgaagggtttcatgggtgatgagcagcttggggaagcgctag 240 Query: 387 atggggccgacctggtgatcatcccggccggcgtcccgaggaagcccggcatgaccaggg 446 | || | ||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 241 agggctcggacgtggtgatcataccggccggcgtcccgaggaagcccggcatgaccaggg 300 Query: 447 acgacctcttca 458 ||||||| |||| Sbjct: 301 acgacctattca 312
>gb|BT017838.1| Zea mays clone EL01N0509G03.c mRNA sequence Length = 1337 Score = 309 bits (156), Expect = 4e-81 Identities = 280/320 (87%), Gaps = 1/320 (0%) Strand = Plus / Plus Query: 140 cagcttctccgccgccgcagctactcctccgcgtccgggcagcaggagcggaaggtggcc 199 ||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||||| Sbjct: 59 cagctcctccgccgccggagctactcctccgcatccgggcagcccgagcggaaggtggcc 118 Query: 200 a-tcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccc 258 ||||||| ||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 119 tctcctcggggcggcggggggcatcgggcagccgctgtcgctgctcatgaagctcaaccc 178 Query: 259 cctcgtctcctccctctccctctacgatatcgcggccaccccgggcgtcgctgccgacgt 318 ||||||||||||||||| |||||||||||||| | |||||| || ||||| |||||||| Sbjct: 179 actcgtctcctccctctcgctctacgatatcgccggcaccccaggtgtcgcggccgacgt 238 Query: 319 ttcccacatcaactcccctgccctggccaaggggttcatgggggacgatcagctcgcgga 378 ||||||||||||||||| ||||||| ||||| |||||||| || || ||||| | ||| Sbjct: 239 ctcccacatcaactcccccgccctggtgaagggtttcatgggtgatgagcagcttgggga 298 Query: 379 ggcgttggatggggccgacctggtgatcatcccggccggcgtcccgaggaagcccggcat 438 ||| | || || | ||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 299 agcgctagagggctcggacgtggtgatcataccggccggcgtcccgaggaagcccggcat 358 Query: 439 gaccagggacgacctcttca 458 ||||||||||||||| |||| Sbjct: 359 gaccagggacgacctattca 378
>gb|BT016719.1| Zea mays clone Contig552 mRNA sequence Length = 1581 Score = 276 bits (139), Expect = 6e-71 Identities = 241/275 (87%) Strand = Plus / Plus Query: 184 ggagcggaaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcct 243 ||||||||||||||||||||| || || || || ||||||||||||||||| || ||||| Sbjct: 244 ggagcggaaggtggccatcctgggcgctgcgggcggcatcgggcagccgctctccctcct 303 Query: 244 catgaagctgaaccccctcgtctcctccctctccctctacgatatcgcggccaccccggg 303 ||||||||| ||||| ||||||||||||||||||||||| |||||||| | ||||| || Sbjct: 304 catgaagctcaacccgctcgtctcctccctctccctctatgatatcgccgggacccccgg 363 Query: 304 cgtcgctgccgacgtttcccacatcaactcccctgccctggccaaggggttcatggggga 363 |||||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 364 cgtcgcggccgacgtctcccacatcaactcccccgccctggtgaaggggttcatggggga 423 Query: 364 cgatcagctcgcggaggcgttggatggggccgacctggtgatcatcccggccggcgtccc 423 ||| ||||||| ||||||| | || || ||||| | || |||||||| ||||| || || Sbjct: 424 cgaccagctcggggaggcgctcgagggctccgacgtcgtcatcatcccagccggggtgcc 483 Query: 424 gaggaagcccggcatgaccagggacgacctcttca 458 ||||||||||||||||| |||||||||||||||| Sbjct: 484 caggaagcccggcatgactagggacgacctcttca 518
>gb|AY103861.1| Zea mays PCO062153 mRNA sequence Length = 1633 Score = 276 bits (139), Expect = 6e-71 Identities = 241/275 (87%) Strand = Plus / Plus Query: 184 ggagcggaaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcct 243 ||||||||||||||||||||| || || || || ||||||||||||||||| || ||||| Sbjct: 243 ggagcggaaggtggccatcctgggcgctgcgggcggcatcgggcagccgctctccctcct 302 Query: 244 catgaagctgaaccccctcgtctcctccctctccctctacgatatcgcggccaccccggg 303 ||||||||| ||||| ||||||||||||||||||||||| |||||||| | ||||| || Sbjct: 303 catgaagctcaacccgctcgtctcctccctctccctctatgatatcgccgggacccccgg 362 Query: 304 cgtcgctgccgacgtttcccacatcaactcccctgccctggccaaggggttcatggggga 363 |||||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 363 cgtcgcggccgacgtctcccacatcaactcccccgccctggtgaaggggttcatggggga 422 Query: 364 cgatcagctcgcggaggcgttggatggggccgacctggtgatcatcccggccggcgtccc 423 ||| ||||||| ||||||| | || || ||||| | || |||||||| ||||| || || Sbjct: 423 cgaccagctcggggaggcgctcgagggctccgacgtcgtcatcatcccagccggggtgcc 482 Query: 424 gaggaagcccggcatgaccagggacgacctcttca 458 ||||||||||||||||| |||||||||||||||| Sbjct: 483 caggaagcccggcatgactagggacgacctcttca 517
>gb|BT009213.1| Triticum aestivum clone wle1n.pk0057.g6:fis, full insert mRNA sequence Length = 1405 Score = 260 bits (131), Expect = 4e-66 Identities = 239/275 (86%) Strand = Plus / Plus Query: 184 ggagcggaaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcct 243 |||||||||||||||||||||||| ||||| || |||||||| ||||||||| | || || Sbjct: 77 ggagcggaaggtggccatcctcggcgcggcgggcggcatcggccagccgctggcgctgct 136 Query: 244 catgaagctgaaccccctcgtctcctccctctccctctacgatatcgcggccaccccggg 303 ||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 137 catgaagctcaacccgctcgtctcctccctctccctctacgacatcgccgccacgcccgg 196 Query: 304 cgtcgctgccgacgtttcccacatcaactcccctgccctggccaaggggttcatggggga 363 |||||| |||||||| |||||||||||| ||| ||||||| ||||| ||| | ||||| Sbjct: 197 cgtcgccgccgacgtctcccacatcaacacccgcgccctggtgaagggcttcgtcgggga 256 Query: 364 cgatcagctcgcggaggcgttggatggggccgacctggtgatcatcccggccggcgtccc 423 ||| ||||||| ||||||| |||| || |||||||| || |||||||| ||||| || || Sbjct: 257 cgaccagctcggggaggcgctggagggcgccgacctcgtcatcatccccgccggggtgcc 316 Query: 424 gaggaagcccggcatgaccagggacgacctcttca 458 | ||||||||||||||||||||||||||||||| Sbjct: 317 ccgcaagcccggcatgaccagggacgacctcttca 351
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 256 bits (129), Expect = 6e-65 Identities = 209/235 (88%), Gaps = 3/235 (1%) Strand = Plus / Plus Query: 110 atgaggtcctcggtgatgagatccgccgcgcagcttctccgccgccgcagc---tactcc 166 |||||| | ||| |||||||||||||| ||||| | |||||||||||| || |||||| Sbjct: 26184592 atgaggccgtcgctgatgagatccgcctcgcaggtcctccgccgccgccgcggctactcc 26184651 Query: 167 tccgcgtccgggcagcaggagcggaaggtggccatcctcggtgcggccggtggcatcggg 226 ||||| ||||| |||| |||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 26184652 tccgcctccggccagccggagcggaaggtcgccatcctcggcgcggccggcggcatcggg 26184711 Query: 227 cagccgctgtctctcctcatgaagctgaaccccctcgtctcctccctctccctctacgat 286 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 26184712 cagccgctctccctcctcatgaagctgaacccgctcgtctcctccctctccctctacgat 26184771 Query: 287 atcgcggccaccccgggcgtcgctgccgacgtttcccacatcaactcccctgccc 341 ||||| | |||||| |||||||| |||||||| |||||||||||| |||| |||| Sbjct: 26184772 atcgccggcacccccggcgtcgccgccgacgtctcccacatcaacgccccggccc 26184826 Score = 151 bits (76), Expect = 2e-33 Identities = 103/112 (91%) Strand = Plus / Plus Query: 347 aaggggttcatgggggacgatcagctcgcggaggcgttggatggggccgacctggtgatc 406 ||||||||||||||||| || ||||||| |||||||||||| ||| | ||| | |||||| Sbjct: 26184937 aaggggttcatgggggatgaccagctcggggaggcgttggaggggtcggacatcgtgatc 26184996 Query: 407 atcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 26184997 atcccggccggcgtgccgaggaagcccggcatgaccagggacgacctcttca 26185048
>dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1316_H05 Length = 105346 Score = 256 bits (129), Expect = 6e-65 Identities = 209/235 (88%), Gaps = 3/235 (1%) Strand = Plus / Plus Query: 110 atgaggtcctcggtgatgagatccgccgcgcagcttctccgccgccgcagc---tactcc 166 |||||| | ||| |||||||||||||| ||||| | |||||||||||| || |||||| Sbjct: 90009 atgaggccgtcgctgatgagatccgcctcgcaggtcctccgccgccgccgcggctactcc 90068 Query: 167 tccgcgtccgggcagcaggagcggaaggtggccatcctcggtgcggccggtggcatcggg 226 ||||| ||||| |||| |||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 90069 tccgcctccggccagccggagcggaaggtcgccatcctcggcgcggccggcggcatcggg 90128 Query: 227 cagccgctgtctctcctcatgaagctgaaccccctcgtctcctccctctccctctacgat 286 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 90129 cagccgctctccctcctcatgaagctgaacccgctcgtctcctccctctccctctacgat 90188 Query: 287 atcgcggccaccccgggcgtcgctgccgacgtttcccacatcaactcccctgccc 341 ||||| | |||||| |||||||| |||||||| |||||||||||| |||| |||| Sbjct: 90189 atcgccggcacccccggcgtcgccgccgacgtctcccacatcaacgccccggccc 90243 Score = 151 bits (76), Expect = 2e-33 Identities = 103/112 (91%) Strand = Plus / Plus Query: 347 aaggggttcatgggggacgatcagctcgcggaggcgttggatggggccgacctggtgatc 406 ||||||||||||||||| || ||||||| |||||||||||| ||| | ||| | |||||| Sbjct: 90354 aaggggttcatgggggatgaccagctcggggaggcgttggaggggtcggacatcgtgatc 90413 Query: 407 atcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 90414 atcccggccggcgtgccgaggaagcccggcatgaccagggacgacctcttca 90465
>dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047B08 Length = 57846 Score = 256 bits (129), Expect = 6e-65 Identities = 209/235 (88%), Gaps = 3/235 (1%) Strand = Plus / Plus Query: 110 atgaggtcctcggtgatgagatccgccgcgcagcttctccgccgccgcagc---tactcc 166 |||||| | ||| |||||||||||||| ||||| | |||||||||||| || |||||| Sbjct: 25722 atgaggccgtcgctgatgagatccgcctcgcaggtcctccgccgccgccgcggctactcc 25781 Query: 167 tccgcgtccgggcagcaggagcggaaggtggccatcctcggtgcggccggtggcatcggg 226 ||||| ||||| |||| |||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 25782 tccgcctccggccagccggagcggaaggtcgccatcctcggcgcggccggcggcatcggg 25841 Query: 227 cagccgctgtctctcctcatgaagctgaaccccctcgtctcctccctctccctctacgat 286 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 25842 cagccgctctccctcctcatgaagctgaacccgctcgtctcctccctctccctctacgat 25901 Query: 287 atcgcggccaccccgggcgtcgctgccgacgtttcccacatcaactcccctgccc 341 ||||| | |||||| |||||||| |||||||| |||||||||||| |||| |||| Sbjct: 25902 atcgccggcacccccggcgtcgccgccgacgtctcccacatcaacgccccggccc 25956 Score = 151 bits (76), Expect = 2e-33 Identities = 103/112 (91%) Strand = Plus / Plus Query: 347 aaggggttcatgggggacgatcagctcgcggaggcgttggatggggccgacctggtgatc 406 ||||||||||||||||| || ||||||| |||||||||||| ||| | ||| | |||||| Sbjct: 26067 aaggggttcatgggggatgaccagctcggggaggcgttggaggggtcggacatcgtgatc 26126 Query: 407 atcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 26127 atcccggccggcgtgccgaggaagcccggcatgaccagggacgacctcttca 26178
>dbj|AK073698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057I02, full insert sequence Length = 1303 Score = 244 bits (123), Expect = 2e-61 Identities = 296/351 (84%), Gaps = 2/351 (0%) Strand = Plus / Plus Query: 109 gatgaggtcctcggtgatgagatccgccgcgcagcttctccgccgccgcagctactcctc 168 ||||||| | ||| || |||||| |||||||||| |||||||||||| ||||||||| Sbjct: 57 gatgaggccgtcgctgctgagatacgccgcgcaggcgctccgccgccgcgactactcctc 116 Query: 169 cgcgtccg-ggcagcaggagcggaaggtggccatcctcggtgcggccggtggcatcgggc 227 ||| ||| ||| || | |||||||||||||||||||||| ||||| || || ||||| | Sbjct: 117 cgccgccgcggccgctg-agcggaaggtggccatcctcggggcggcgggcgggatcggcc 175 Query: 228 agccgctgtctctcctcatgaagctgaaccccctcgtctcctccctctccctctacgata 287 ||||||| | |||||||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 176 agccgctcgcgctcctcatgaagctcaacccgctcgtctcgtccctctccctctacgata 235 Query: 288 tcgcggccaccccgggcgtcgctgccgacgtttcccacatcaactcccctgccctggcca 347 |||| | ||||| |||||||| ||||| || |||||||||||||| || || |||| | Sbjct: 236 tcgccggaacccccggcgtcgccgccgatgtctcccacatcaactcgccggcgctggtga 295 Query: 348 aggggttcatgggggacgatcagctcgcggaggcgttggatggggccgacctggtgatca 407 | || ||| | ||||| || ||||||| |||||||||||| || | ||| | || |||| Sbjct: 296 aaggcttcgtcggggaggagcagctcggggaggcgttggagggttcggacgtcgtaatca 355 Query: 408 tcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 |||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 356 tcccggccggtgtgccgaggaagcccggcatgaccagggacgacctcttca 406
>ref|XM_475913.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1023 Score = 242 bits (122), Expect = 9e-61 Identities = 283/334 (84%), Gaps = 2/334 (0%) Strand = Plus / Plus Query: 126 tgagatccgccgcgcagcttctccgccgccgcagctactcctccgcgtccg-ggcagcag 184 |||||| |||||||||| |||||||||||| |||||||||||| ||| ||| || | Sbjct: 17 tgagatacgccgcgcaggcgctccgccgccgcgactactcctccgccgccgcggccgctg 76 Query: 185 gagcggaaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctc 244 |||||||||||||||||||||| ||||| || || ||||| |||||||| | |||||| Sbjct: 77 -agcggaaggtggccatcctcggggcggcgggcgggatcggccagccgctcgcgctcctc 135 Query: 245 atgaagctgaaccccctcgtctcctccctctccctctacgatatcgcggccaccccgggc 304 |||||||| ||||| |||||||| ||||||||||||||||||||||| | ||||| ||| Sbjct: 136 atgaagctcaacccgctcgtctcgtccctctccctctacgatatcgccggaacccccggc 195 Query: 305 gtcgctgccgacgtttcccacatcaactcccctgccctggccaaggggttcatgggggac 364 ||||| ||||| || |||||||||||||| || || |||| || || ||| | ||||| Sbjct: 196 gtcgccgccgatgtctcccacatcaactcgccggcgctggtgaaaggcttcgtcggggag 255 Query: 365 gatcagctcgcggaggcgttggatggggccgacctggtgatcatcccggccggcgtcccg 424 || ||||||| |||||||||||| || | ||| | || |||||||||||||| || ||| Sbjct: 256 gagcagctcggggaggcgttggagggttcggacgtcgtaatcatcccggccggtgtgccg 315 Query: 425 aggaagcccggcatgaccagggacgacctcttca 458 |||||||||||||||||||||||||||||||||| Sbjct: 316 aggaagcccggcatgaccagggacgacctcttca 349
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 163 bits (82), Expect = 6e-37 Identities = 192/226 (84%), Gaps = 2/226 (0%) Strand = Plus / Minus Query: 109 gatgaggtcctcggtgatgagatccgccgcgcagcttctccgccgccgcagctactcctc 168 ||||||| | ||| || |||||| |||||||||| |||||||||||| ||||||||| Sbjct: 185332 gatgaggccgtcgctgctgagatacgccgcgcaggcgctccgccgccgcgactactcctc 185273 Query: 169 cgcgtccg-ggcagcaggagcggaaggtggccatcctcggtgcggccggtggcatcgggc 227 ||| ||| ||| || | |||||||||||||||||||||| ||||| || || ||||| | Sbjct: 185272 cgccgccgcggccgctg-agcggaaggtggccatcctcggggcggcgggcgggatcggcc 185214 Query: 228 agccgctgtctctcctcatgaagctgaaccccctcgtctcctccctctccctctacgata 287 ||||||| | |||||||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 185213 agccgctcgcgctcctcatgaagctcaacccgctcgtctcgtccctctccctctacgata 185154 Query: 288 tcgcggccaccccgggcgtcgctgccgacgtttcccacatcaactc 333 |||| | ||||| |||||||| ||||| || |||||||||||||| Sbjct: 185153 tcgccggaacccccggcgtcgccgccgatgtctcccacatcaactc 185108 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 359 ggggacgatcagctcgcggaggcgttggatggggccgacctggtgatcatcccggccggc 418 ||||| || ||||||| |||||||||||| || | ||| | || |||||||||||||| Sbjct: 184994 ggggaggagcagctcggggaggcgttggagggttcggacgtcgtaatcatcccggccggt 184935 Query: 419 gtcccgaggaagcccggcatgaccagggacgacctcttca 458 || ||||||||||||||||||||||||||||||||||||| Sbjct: 184934 gtgccgaggaagcccggcatgaccagggacgacctcttca 184895
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 163 bits (82), Expect = 6e-37 Identities = 192/226 (84%), Gaps = 2/226 (0%) Strand = Plus / Minus Query: 109 gatgaggtcctcggtgatgagatccgccgcgcagcttctccgccgccgcagctactcctc 168 ||||||| | ||| || |||||| |||||||||| |||||||||||| ||||||||| Sbjct: 36014 gatgaggccgtcgctgctgagatacgccgcgcaggcgctccgccgccgcgactactcctc 35955 Query: 169 cgcgtccg-ggcagcaggagcggaaggtggccatcctcggtgcggccggtggcatcgggc 227 ||| ||| ||| || | |||||||||||||||||||||| ||||| || || ||||| | Sbjct: 35954 cgccgccgcggccgctg-agcggaaggtggccatcctcggggcggcgggcgggatcggcc 35896 Query: 228 agccgctgtctctcctcatgaagctgaaccccctcgtctcctccctctccctctacgata 287 ||||||| | |||||||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 35895 agccgctcgcgctcctcatgaagctcaacccgctcgtctcgtccctctccctctacgata 35836 Query: 288 tcgcggccaccccgggcgtcgctgccgacgtttcccacatcaactc 333 |||| | ||||| |||||||| ||||| || |||||||||||||| Sbjct: 35835 tcgccggaacccccggcgtcgccgccgatgtctcccacatcaactc 35790 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 359 ggggacgatcagctcgcggaggcgttggatggggccgacctggtgatcatcccggccggc 418 ||||| || ||||||| |||||||||||| || | ||| | || |||||||||||||| Sbjct: 35676 ggggaggagcagctcggggaggcgttggagggttcggacgtcgtaatcatcccggccggt 35617 Query: 419 gtcccgaggaagcccggcatgaccagggacgacctcttca 458 || ||||||||||||||||||||||||||||||||||||| Sbjct: 35616 gtgccgaggaagcccggcatgaccagggacgacctcttca 35577
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 163 bits (82), Expect = 6e-37 Identities = 192/226 (84%), Gaps = 2/226 (0%) Strand = Plus / Minus Query: 109 gatgaggtcctcggtgatgagatccgccgcgcagcttctccgccgccgcagctactcctc 168 ||||||| | ||| || |||||| |||||||||| |||||||||||| ||||||||| Sbjct: 28401090 gatgaggccgtcgctgctgagatacgccgcgcaggcgctccgccgccgcgactactcctc 28401031 Query: 169 cgcgtccg-ggcagcaggagcggaaggtggccatcctcggtgcggccggtggcatcgggc 227 ||| ||| ||| || | |||||||||||||||||||||| ||||| || || ||||| | Sbjct: 28401030 cgccgccgcggccgctg-agcggaaggtggccatcctcggggcggcgggcgggatcggcc 28400972 Query: 228 agccgctgtctctcctcatgaagctgaaccccctcgtctcctccctctccctctacgata 287 ||||||| | |||||||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 28400971 agccgctcgcgctcctcatgaagctcaacccgctcgtctcgtccctctccctctacgata 28400912 Query: 288 tcgcggccaccccgggcgtcgctgccgacgtttcccacatcaactc 333 |||| | ||||| |||||||| ||||| || |||||||||||||| Sbjct: 28400911 tcgccggaacccccggcgtcgccgccgatgtctcccacatcaactc 28400866 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 359 ggggacgatcagctcgcggaggcgttggatggggccgacctggtgatcatcccggccggc 418 ||||| || ||||||| |||||||||||| || | ||| | || |||||||||||||| Sbjct: 28400752 ggggaggagcagctcggggaggcgttggagggttcggacgtcgtaatcatcccggccggt 28400693 Query: 419 gtcccgaggaagcccggcatgaccagggacgacctcttca 458 || ||||||||||||||||||||||||||||||||||||| Sbjct: 28400692 gtgccgaggaagcccggcatgaccagggacgacctcttca 28400653
>ref|NM_112364.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT3G15020 mRNA, complete cds Length = 1396 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 199 catcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccc 258 |||||||||||| |||||||| ||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 162 catcctcggtgccgccggtgggatcggccagccactttctcttctcatgaagcttaaccc 221 Query: 259 cctcgtctcctccctctccctctacgatatcgc 291 |||||||| || ||||||||||| |||||||| Sbjct: 222 tctcgtctcttctctctccctctatgatatcgc 254
>gb|AY093788.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, complete cds Length = 1026 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 199 catcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccc 258 |||||||||||| |||||||| ||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 99 catcctcggtgccgccggtgggatcggccagccactttctcttctcatgaagcttaaccc 158 Query: 259 cctcgtctcctccctctccctctacgatatcgc 291 |||||||| || ||||||||||| |||||||| Sbjct: 159 tctcgtctcttctctctccctctatgatatcgc 191
>gb|AY045592.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, complete cds Length = 1396 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 199 catcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccc 258 |||||||||||| |||||||| ||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 162 catcctcggtgccgccggtgggatcggccagccactttctcttctcatgaagcttaaccc 221 Query: 259 cctcgtctcctccctctccctctacgatatcgc 291 |||||||| || ||||||||||| |||||||| Sbjct: 222 tctcgtctcttctctctccctctatgatatcgc 254
>emb|BX824867.1|CNS0A5NF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1302 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 199 catcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccc 258 |||||||||||| |||||||| ||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 140 catcctcggtgccgccggtgggatcggccagccactttctcttctcatgaagcttaaccc 199 Query: 259 cctcgtctcctccctctccctctacgatatcgc 291 |||||||| || ||||||||||| |||||||| Sbjct: 200 tctcgtctcttctctctccctctatgatatcgc 232
>emb|BX824034.1|CNS0A5H3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH17ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1232 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 199 catcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccc 258 |||||||||||| |||||||| ||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 147 catcctcggtgccgccggtgggatcggccagccactttctcttctcatgaagcttaaccc 206 Query: 259 cctcgtctcctccctctccctctacgatatcgc 291 |||||||| || ||||||||||| |||||||| Sbjct: 207 tctcgtctcttctctctccctctatgatatcgc 239
>gb|AY089112.1| Arabidopsis thaliana clone 34499 mRNA, complete sequence Length = 1302 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 199 catcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccc 258 |||||||||||| |||||||| ||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 162 catcctcggtgccgccggtgggatcggccagccactttctcttctcatgaagcttaaccc 221 Query: 259 cctcgtctcctccctctccctctacgatatcgc 291 |||||||| || ||||||||||| |||||||| Sbjct: 222 tctcgtctcttctctctccctctatgatatcgc 254
>dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K15M2 Length = 79279 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 199 catcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccc 258 |||||||||||| |||||||| ||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 52269 catcctcggtgccgccggtgggatcggccagccactttctcttctcatgaagcttaaccc 52328 Query: 259 cctcgtctcctccctctccctctacgatatcgc 291 |||||||| || ||||||||||| |||||||| Sbjct: 52329 tctcgtctcttctctctccctctatgatatcgc 52361
>emb|X78800.1|EGMMDH E.gunnii mRNA for mitochondrial malate dehydrogenase Length = 1375 Score = 87.7 bits (44), Expect = 3e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 184 ggagcggaaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcct 243 |||||||||||||||| | ||||| || || || || ||||| ||||| || |||| || Sbjct: 159 ggagcggaaggtggccgtgctcggcgccgcgggcgggatcggccagcccctcgctcttct 218 Query: 244 catgaagctgaaccccctcgtctcctccctctccctctacgatatcgcggccaccccggg 303 ||||||||| ||||| ||||||||| ||| |||||||||||||||| | ||| || || Sbjct: 219 catgaagctcaaccctctcgtctcccagctcgccctctacgatatcgccggcactcccgg 278 Query: 304 cgtcgctgccgacgtttcccacatcaac 331 |||||| |||||||| |||||||||| Sbjct: 279 cgtcgccgccgacgtcggccacatcaac 306
>ref|NM_104202.2| Arabidopsis thaliana malate dehydrogenase AT1G53240 mRNA, complete cds Length = 1512 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 197 gccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaac 256 |||||||| ||||| |||||||| || || ||||| || |||||||||||||||| || Sbjct: 232 gccatccttggtgccgccggtggaattggtcagcctcttgctctcctcatgaagcttaat 291 Query: 257 cccctcgtctcctccctctccctctacgatatcgc 291 || || ||||| ||||||||||||||||||||||| Sbjct: 292 cctcttgtctcttccctctccctctacgatatcgc 326
>gb|AF339684.1| Arabidopsis thaliana putative mitochondrial NAD-dependent malate dehydrogenase (At1g53240) mRNA, complete cds Length = 1076 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 197 gccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaac 256 |||||||| ||||| |||||||| || || ||||| || |||||||||||||||| || Sbjct: 97 gccatccttggtgccgccggtggaattggtcagcctcttgctctcctcatgaagcttaat 156 Query: 257 cccctcgtctcctccctctccctctacgatatcgc 291 || || ||||| ||||||||||||||||||||||| Sbjct: 157 cctcttgtctcttccctctccctctacgatatcgc 191
>emb|AJ131205.1|ATH131205 Arabidopsis thaliana mRNA for mitochondrial NAD-dependent malate dehydrogenase Length = 1265 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 197 gccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaac 256 |||||||| ||||| |||||||| || || ||||| || |||||||||||||||| || Sbjct: 188 gccatccttggtgccgccggtggaattggtcagcctcttgctctcctcatgaagcttaat 247 Query: 257 cccctcgtctcctccctctccctctacgatatcgc 291 || || ||||| ||||||||||||||||||||||| Sbjct: 248 cctcttgtctcttccctctccctctacgatatcgc 282
>gb|AY128783.1| Arabidopsis thaliana similar to mitochondrial NAD-dependent malate dehydrogenase (At1g53240) mRNA, complete cds Length = 1273 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 197 gccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaac 256 |||||||| ||||| |||||||| || || ||||| || |||||||||||||||| || Sbjct: 97 gccatccttggtgccgccggtggaattggtcagcctcttgctctcctcatgaagcttaat 156 Query: 257 cccctcgtctcctccctctccctctacgatatcgc 291 || || ||||| ||||||||||||||||||||||| Sbjct: 157 cctcttgtctcttccctctccctctacgatatcgc 191
>gb|AF324670.2| Arabidopsis thaliana At1g53240 (At1g53240/F12M16_14) mRNA, complete cds Length = 1336 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 197 gccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaac 256 |||||||| ||||| |||||||| || || ||||| || |||||||||||||||| || Sbjct: 155 gccatccttggtgccgccggtggaattggtcagcctcttgctctcctcatgaagcttaat 214 Query: 257 cccctcgtctcctccctctccctctacgatatcgc 291 || || ||||| ||||||||||||||||||||||| Sbjct: 215 cctcttgtctcttccctctccctctacgatatcgc 249
>gb|AY062580.1| Arabidopsis thaliana similar to mitochondrial NAD-dependent malate dehydrogenase (At1g53240; F12M16.14) mRNA, complete cds Length = 1440 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 197 gccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaac 256 |||||||| ||||| |||||||| || || ||||| || |||||||||||||||| || Sbjct: 207 gccatccttggtgccgccggtggaattggtcagcctcttgctctcctcatgaagcttaat 266 Query: 257 cccctcgtctcctccctctccctctacgatatcgc 291 || || ||||| ||||||||||||||||||||||| Sbjct: 267 cctcttgtctcttccctctccctctacgatatcgc 301
>emb|BX814119.1|CNS0ADTT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1301 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 197 gccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaac 256 |||||||| ||||| |||||||| || || ||||| || |||||||||||||||| || Sbjct: 214 gccatccttggtgccgccggtggaattggtcagcctcttgctctcctcatgaagcttaat 273 Query: 257 cccctcgtctcctccctctccctctacgatatcgc 291 || || ||||| ||||||||||||||||||||||| Sbjct: 274 cctcttgtctcttccctctccctctacgatatcgc 308
>emb|BX818530.1|CNS0ACMK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1304 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 197 gccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaac 256 |||||||| ||||| |||||||| || || ||||| || |||||||||||||||| || Sbjct: 143 gccatccttggtgccgccggtggaattggtcagcctcttgctctcctcatgaagcttaat 202 Query: 257 cccctcgtctcctccctctccctctacgatatcgc 291 || || ||||| ||||||||||||||||||||||| Sbjct: 203 cctcttgtctcttccctctccctctacgatatcgc 237
>emb|BX815223.1|CNS0ACW4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS43ZE06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1301 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 197 gccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaac 256 |||||||| ||||| |||||||| || || ||||| || |||||||||||||||| || Sbjct: 139 gccatccttggtgccgccggtggaattggtcagcctcttgctctcctcatgaagcttaat 198 Query: 257 cccctcgtctcctccctctccctctacgatatcgc 291 || || ||||| ||||||||||||||||||||||| Sbjct: 199 cctcttgtctcttccctctccctctacgatatcgc 233
>emb|BX815069.1|CNS0AAOE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS30ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1457 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 197 gccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaac 256 |||||||| ||||| |||||||| || || ||||| || |||||||||||||||| || Sbjct: 220 gccatccttggtgccgccggtggaattggtcagcctcttgctctcctcatgaagcttaat 279 Query: 257 cccctcgtctcctccctctccctctacgatatcgc 291 || || ||||| ||||||||||||||||||||||| Sbjct: 280 cctcttgtctcttccctctccctctacgatatcgc 314
>gb|AC008007.7|AC008007 Genomic sequence for Arabidopsis thaliana BAC F12M16 from chromosome I, complete sequence Length = 130235 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 197 gccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaac 256 |||||||| ||||| |||||||| || || ||||| || |||||||||||||||| || Sbjct: 55611 gccatccttggtgccgccggtggaattggtcagcctcttgctctcctcatgaagcttaat 55552 Query: 257 cccctcgtctcctccctctccctctacgatatcgc 291 || || ||||| ||||||||||||||||||||||| Sbjct: 55551 cctcttgtctcttccctctccctctacgatatcgc 55517
>gb|AF020271.1|AF020271 Medicago sativa mitochondrial malate dehydrogenase precursor (mmdh) mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1467 Score = 79.8 bits (40), Expect = 7e-12 Identities = 118/144 (81%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaag 250 ||||||||||| |||||||| |||||||| ||||| ||||| || ||||| ||||||||| Sbjct: 175 aaggtggccattctcggtgccgccggtgggatcggtcagcccctctctcttctcatgaag 234 Query: 251 ctgaaccccctcgtctcctccctctccctctacgatatcgcggccaccccgggcgtcgct 310 || ||||| ||||| || |||| || || || ||||| || | ||||| || || ||| Sbjct: 235 ctcaaccctctcgtttcaaccctttctctttatgatattgctggtacccctggtgttgct 294 Query: 311 gccgacgtttcccacatcaactcc 334 ||||| ||| ||||||||||||| Sbjct: 295 gccgatgttagccacatcaactcc 318
>dbj|AP006654.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT31E21, TM0340, complete sequence Length = 120480 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 184 ggagcggaaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcct 243 |||||| ||||| ||| | ||||| || ||||| || ||||| || || || ||||| || Sbjct: 34306 ggagcgcaaggtagccgttctcggcgccgccggcgggatcggacaacccctttctcttct 34247 Query: 244 catgaagctgaaccccctcgtctcctccctctccctctacgatatcgc 291 ||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 34246 catgaagctcaaccccctcgtttcttccctctccctttacgatatcgc 34199
>gb|AY087304.1| Arabidopsis thaliana clone 33917 mRNA, complete sequence Length = 1239 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 197 gccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaac 256 |||||||| ||||| |||||||| || || ||||| || |||||||||||||||| || Sbjct: 232 gccatccttggtgccgccggtggaattggtcagcctcttgctctcctcatgaagcttaat 291 Query: 257 cccctcgtctcctccctctccctctacgatatcgc 291 || || ||||| || |||||||||||||||||||| Sbjct: 292 cctcttgtctcttctctctccctctacgatatcgc 326
>gb|AF180335.1| Glycine max malate dehydrogenase (Mdh1) gene, complete cds; nuclear gene for mitochondrial product Length = 27588 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 184 ggagcggaaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcct 243 |||||| ||||| ||| | ||||| || ||||| || ||||||||||| || || || || Sbjct: 7349 ggagcgcaaggtagccgttctcggcgccgccggcgggatcgggcagcctctctcccttct 7408 Query: 244 catgaagctgaaccccctcgtctcctccctctccctctacgatatcgcggccaccccggg 303 ||||||||| || |||||||| || ||||||||| ||||||||||| | ||||| || Sbjct: 7409 catgaagctcaatcccctcgtttcgagcctctccctttacgatatcgccggaacccccgg 7468 Query: 304 cgtcgctgccga 315 |||||| ||||| Sbjct: 7469 cgtcgccgccga 7480
>emb|X89451.1|BNMDHGENE B.napus mRNA for mitochondrial malate dehydrogenase Length = 1202 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 212 gccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccccctcgtctcctcc 271 |||||||| ||||| ||||| ||| ||||||||||||| || || ||||||||||| | Sbjct: 150 gccggtggaatcggtcagcctctggctctcctcatgaaactcaatcccctcgtctcaagc 209 Query: 272 ctctccctctacgatatcgc 291 |||||||| ||||||||||| Sbjct: 210 ctctccctttacgatatcgc 229
>ref|NM_194083.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1352 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaag 250 ||||||||| | || || ||||| || || ||||||||||||||||| || ||||||||| Sbjct: 193 aaggtggccgtgctgggcgcggcgggagggatcgggcagccgctgtcgctgctcatgaag 252 Query: 251 ctgaaccccctcgtctc 267 ||||||| |||||||| Sbjct: 253 ttgaacccgctcgtctc 269
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaag 250 ||||||||| | || || ||||| || || ||||||||||||||||| || ||||||||| Sbjct: 31785310 aaggtggccgtgctgggcgcggcgggagggatcgggcagccgctgtcgctgctcatgaag 31785251 Query: 251 ctgaaccccctcgtctc 267 ||||||| |||||||| Sbjct: 31785250 ttgaacccgctcgtctc 31785234 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gagcggaaggtggccatcct 204 |||||||||||||||||||| Sbjct: 25376141 gagcggaaggtggccatcct 25376122
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaag 250 ||||||||| | || || ||||| || || ||||||||||||||||| || ||||||||| Sbjct: 110536 aaggtggccgtgctgggcgcggcgggagggatcgggcagccgctgtcgctgctcatgaag 110477 Query: 251 ctgaaccccctcgtctc 267 ||||||| |||||||| Sbjct: 110476 ttgaacccgctcgtctc 110460
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttc 457 |||||||||||||||||||| | |||||||||||||| | |||||||||||| Sbjct: 1140630 tcatcccggccggcgtcccgcgcaagcccggcatgactcgcgacgacctcttc 1140682 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 gccggtggcatcgggcagccgctgtctct 240 |||||||||||||| |||||||| ||||| Sbjct: 1140437 gccggtggcatcggccagccgctctctct 1140465
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaag 250 ||||||||| | || || ||||| || || ||||||||||||||||| || ||||||||| Sbjct: 31875826 aaggtggccgtgctgggcgcggcgggagggatcgggcagccgctgtcgctgctcatgaag 31875767 Query: 251 ctgaaccccctcgtctc 267 ||||||| |||||||| Sbjct: 31875766 ttgaacccgctcgtctc 31875750 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gagcggaaggtggccatcct 204 |||||||||||||||||||| Sbjct: 25467450 gagcggaaggtggccatcct 25467431
>dbj|AK104821.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-B02, full insert sequence Length = 1233 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaag 250 ||||||||| | || || ||||| || || ||||||||||||||||| || ||||||||| Sbjct: 152 aaggtggccgtgctgggcgcggcgggagggatcgggcagccgctgtcgctgctcatgaag 211 Query: 251 ctgaaccccctcgtctc 267 ||||||| |||||||| Sbjct: 212 ttgaacccgctcgtctc 228
>ref|NM_209701.1| Eremothecium gossypii ADR252Wp (ADR252W), mRNA Length = 1458 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttc 457 |||||||||||||||||||| | |||||||||||||| | |||||||||||| Sbjct: 221 tcatcccggccggcgtcccgcgcaagcccggcatgactcgcgacgacctcttc 273 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 gccggtggcatcgggcagccgctgtctct 240 |||||||||||||| |||||||| ||||| Sbjct: 28 gccggtggcatcggccagccgctctctct 56
>dbj|AK067105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097J20, full insert sequence Length = 1497 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaag 250 ||||||||| | || || ||||| || || ||||||||||||||||| || ||||||||| Sbjct: 371 aaggtggccgtgctgggcgcggcgggagggatcgggcagccgctgtcgctgctcatgaag 430 Query: 251 ctgaaccccctcgtctc 267 ||||||| |||||||| Sbjct: 431 ttgaacccgctcgtctc 447
>dbj|AK064972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B17, full insert sequence Length = 1319 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaag 250 ||||||||| | || || ||||| || || ||||||||||||||||| || ||||||||| Sbjct: 178 aaggtggccgtgctgggcgcggcgggagggatcgggcagccgctgtcgctgctcatgaag 237 Query: 251 ctgaaccccctcgtctc 267 ||||||| |||||||| Sbjct: 238 ttgaacccgctcgtctc 254
>ref|XM_507398.1| PREDICTED Oryza sativa (japonica cultivar-group), P0011H09.138 mRNA Length = 1480 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctc 244 ||||| ||||||||||| || |||||||| |||||||||||||| || |||||| Sbjct: 436 aaggtcgccatcctcggcgccgccggtgggatcgggcagccgctctcgctcctc 489 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgac 441 ||||||| |||||||| ||||||||||| || ||||| Sbjct: 650 tcatccccgccggcgtgccgaggaagccagggatgac 686
>ref|XM_507397.1| PREDICTED Oryza sativa (japonica cultivar-group), P0011H09.138 mRNA Length = 1834 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctc 244 ||||| ||||||||||| || |||||||| |||||||||||||| || |||||| Sbjct: 790 aaggtcgccatcctcggcgccgccggtgggatcgggcagccgctctcgctcctc 843 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgac 441 ||||||| |||||||| ||||||||||| || ||||| Sbjct: 1004 tcatccccgccggcgtgccgaggaagccagggatgac 1040
>ref|NM_193082.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1331 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctc 244 ||||| ||||||||||| || |||||||| |||||||||||||| || |||||| Sbjct: 287 aaggtcgccatcctcggcgccgccggtgggatcgggcagccgctctcgctcctc 340 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgac 441 ||||||| |||||||| ||||||||||| || ||||| Sbjct: 501 tcatccccgccggcgtgccgaggaagccagggatgac 537
>ref|XM_506491.2| PREDICTED Oryza sativa (japonica cultivar-group), P0011H09.138 mRNA Length = 1611 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctc 244 ||||| ||||||||||| || |||||||| |||||||||||||| || |||||| Sbjct: 323 aaggtcgccatcctcggcgccgccggtgggatcgggcagccgctctcgctcctc 376 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgac 441 ||||||| |||||||| ||||||||||| || ||||| Sbjct: 537 tcatccccgccggcgtgccgaggaagccagggatgac 573
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctc 244 ||||| ||||||||||| || |||||||| |||||||||||||| || |||||| Sbjct: 26101533 aaggtcgccatcctcggcgccgccggtgggatcgggcagccgctctcgctcctc 26101480 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgac 441 ||||||| |||||||| ||||||||||| || ||||| Sbjct: 26101319 tcatccccgccggcgtgccgaggaagccagggatgac 26101283
>gb|AY826858.1| Isochrysis galbana clone ISMD1 malate dehydrogenase mRNA, partial cds Length = 1114 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 ||||||| |||||||||||| | |||||||||||||| | ||||||||||||| Sbjct: 238 tcatccctgccggcgtcccgcgcaagcccggcatgacgcgcgacgacctcttca 291
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctc 244 ||||| ||||||||||| || |||||||| |||||||||||||| || |||||| Sbjct: 135095 aaggtcgccatcctcggcgccgccggtgggatcgggcagccgctctcgctcctc 135042 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgac 441 ||||||| |||||||| ||||||||||| || ||||| Sbjct: 134881 tcatccccgccggcgtgccgaggaagccagggatgac 134845
>dbj|AK106083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A10, full insert sequence Length = 1331 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctc 244 ||||| ||||||||||| || |||||||| |||||||||||||| || |||||| Sbjct: 287 aaggtcgccatcctcggcgccgccggtgggatcgggcagccgctctcgctcctc 340 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgac 441 ||||||| |||||||| ||||||||||| || ||||| Sbjct: 501 tcatccctgccggcgtgccgaggaagccagggatgac 537
>dbj|AK071297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084J02, full insert sequence Length = 1611 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctc 244 ||||| ||||||||||| || |||||||| |||||||||||||| || |||||| Sbjct: 322 aaggtcgccatcctcggcgccgccggtgggatcgggcagccgctctcgctcctc 375 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgac 441 ||||||| |||||||| ||||||||||| || ||||| Sbjct: 536 tcatccccgccggcgtgccgaggaagccagggatgac 572
>dbj|AK068064.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130E16, full insert sequence Length = 1834 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctc 244 ||||| ||||||||||| || |||||||| |||||||||||||| || |||||| Sbjct: 790 aaggtcgccatcctcggcgccgccggtgggatcgggcagccgctctcgctcctc 843 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgac 441 ||||||| |||||||| ||||||||||| || ||||| Sbjct: 1004 tcatccccgccggcgtgccgaggaagccagggatgac 1040
>dbj|AK059570.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A01, full insert sequence Length = 1480 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 191 aaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcctc 244 ||||| ||||||||||| || |||||||| |||||||||||||| || |||||| Sbjct: 436 aaggtcgccatcctcggcgccgccggtgggatcgggcagccgctctcgctcctc 489 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgac 441 ||||||| |||||||| ||||||||||| || ||||| Sbjct: 650 tcatccccgccggcgtgccgaggaagccagggatgac 686
>gb|AF195869.1|AF195869 Vitis vinifera malate dehydrogenase (MDH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1500 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 239 ctcctcatgaagctgaaccccctcgtctcctccctctccctctacgatatcgc 291 |||||||||||||| || || || |||||||| ||||| |||||||||||||| Sbjct: 249 ctcctcatgaagctcaatcctcttgtctcctcgctctctctctacgatatcgc 301
>ref|XM_382637.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG02461.1) partial mRNA Length = 1011 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 203 ctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccccctc 262 |||||||| || ||||| ||||| ||||| || ||||||||| | ||| ||||||||| | Sbjct: 73 ctcggtgctgctggtggtatcggccagcctctctctctcctcctcaagatgaacccccgc 132 Query: 263 gtctcctccctctccctctacgatatc 289 ||| | |||| |||||||||||||| Sbjct: 133 gtcactgacctcgccctctacgatatc 159
>ref|XM_364559.1| Magnaporthe grisea 70-15 hypothetical protein (MG09367.4) partial mRNA Length = 1011 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 ||||||| ||||| ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 278 tcatccccgccggtgtcccccgcaagcccggcatgacccgtgacgacctcttca 331 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 203 ctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaacccc 259 ||||| || |||||||||||||| ||||| || || |||||| | ||||| |||||| Sbjct: 73 ctcggcgccgccggtggcatcggtcagcctctctccctcctcctcaagctcaacccc 129
>ref|XM_324255.1| Neurospora crassa OR74A hypothetical protein (NCU04899.1) partial mRNA Length = 1011 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 ||||||| ||||| ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 278 tcatccccgccggtgtcccccgcaagcccggcatgacccgtgacgacctcttca 331 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 201 tcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccccc 260 |||||||||| ||||||||||| || ||||| || || |||||| | ||||| |||||| Sbjct: 71 tcctcggtgccgccggtggcattggccagcccctctccctcctcctcaagctcaacccca 130 Query: 261 tcgtctcctccctctccctctacgatatc 289 |||||| ||| |||||||||||||| Sbjct: 131 gagtctccgagctcgccctctacgatatc 159
>ref|XM_953315.1| Neurospora crassa OR74A hypothetical protein (NCU04899.1) partial mRNA Length = 1011 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 ||||||| ||||| ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 278 tcatccccgccggtgtcccccgcaagcccggcatgacccgtgacgacctcttca 331 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 201 tcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccccc 260 |||||||||| ||||||||||| || ||||| || || |||||| | ||||| |||||| Sbjct: 71 tcctcggtgccgccggtggcattggccagcccctctccctcctcctcaagctcaacccca 130 Query: 261 tcgtctcctccctctccctctacgatatc 289 |||||| ||| |||||||||||||| Sbjct: 131 gagtctccgagctcgccctctacgatatc 159
>dbj|AK108763.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-G09, full insert sequence Length = 1203 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 ||||||| |||||||| || | ||||||||||||||| | ||||||||||||| Sbjct: 326 tcatccccgccggcgtgccccgcaagcccggcatgacccgtgacgacctcttca 379
>gb|AY849671.1| Magnaporthe grisea malate dehydrogenase-like protein mRNA, complete cds Length = 1490 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 ||||||| ||||| ||||| | ||||||||||||||| | ||||||||||||| Sbjct: 584 tcatccccgccggtgtcccccgcaagcccggcatgacccgtgacgacctcttca 637 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 203 ctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaacccc 259 ||||| || |||||||||||||| ||||| || || |||||| | ||||| |||||| Sbjct: 379 ctcggcgccgccggtggcatcggtcagcctctctccctcctcctcaagctcaacccc 435
>gb|U40212.1|CRU40212 Chlamydomonas reinhardtii malate dehydrogenase gene, nuclear gene encoding mitochondrial protein, complete cds Length = 3282 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 394 cgacctggtgatcatcccggccggcgtcccgaggaagcccggcatgaccagggacgacct 453 ||||||||| |||||||| ||||| || || | ||||||||||||||| | |||||||| Sbjct: 1083 cgacctggtcatcatccccgccggtgtgccccgcaagcccggcatgacccgcgacgacct 1142 Query: 454 cttca 458 |||| Sbjct: 1143 gttca 1147
>emb|AJ488944.1|STU488944 Solanum tuberosum mRNA for putative mitochondrial NAD-dependent malate dehydrogenase (mMDH gene), clone cSTB36K15 Length = 1142 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 221 atcgggcagccgctgtctctcctcatgaagctgaa 255 ||||||||||||||||| || |||||||| ||||| Sbjct: 168 atcgggcagccgctgtcacttctcatgaaactgaa 202
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 134 gccgcgcagcttctccgccgccg 156 ||||||||||||||||||||||| Sbjct: 1449740 gccgcgcagcttctccgccgccg 1449718
>ref|XM_572038.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 1117 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 201 tcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaacccc 259 |||||||||| || ||||| ||||| ||||| ||||||||||| | |||| ||||||| Sbjct: 119 tcctcggtgccgctggtggtatcggtcagcccatgtctctcctcctcaagcagaacccc 177
>gb|AF390561.1|AF390561 Sphyraena idiastes malate dehydrogenase (mMDH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1604 Score = 44.1 bits (22), Expect = 0.41 Identities = 46/54 (85%) Strand = Plus / Plus Query: 405 tcatcccggccggcgtcccgaggaagcccggcatgaccagggacgacctcttca 458 ||||||| ||||| || || ||||| |||||||||||| | || |||||||||| Sbjct: 416 tcatccccgccggtgtgcccaggaaacccggcatgacccgtgatgacctcttca 469
>dbj|AP006506.1| Mus musculus genomic DNA, chromosome 4, clone: RP23-284M8, complete sequence Length = 255195 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 gaaccccctcgtctcctccctctccc 278 |||||||||||| ||||||||||||| Sbjct: 192377 gaaccccctcgtttcctccctctccc 192402
>gb|AF107563.1|MUSPEX1 Mus musculus Cast (Cast) and peroxisomal membrane anchor protein (Pex14) genes, partial sequence Length = 53094 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 253 gaaccccctcgtctcctccctctccc 278 |||||||||||| ||||||||||||| Sbjct: 2614 gaaccccctcgtttcctccctctccc 2589
>dbj|AK110568.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-D08, full insert sequence Length = 1237 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Plus Query: 201 tcctcggtgcggccggtggcatcgggcagccgctgtctctcctcatgaagctgaaccc 258 ||||||| || |||||||| || || || ||| ||||||||||| ||||||| ||||| Sbjct: 137 tcctcggcgctgccggtggaattggacaaccgttgtctctcctcttgaagcttaaccc 194
>dbj|AK109028.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-B10, full insert sequence Length = 1584 Score = 44.1 bits (22), Expect = 0.41 Identities = 64/78 (82%) Strand = Plus / Plus Query: 183 aggagcggaaggtggccatcctcggtgcggccggtggcatcgggcagccgctgtctctcc 242 ||||||| ||||| ||| ||||||| || || ||||||||||| ||||| | || || | Sbjct: 174 aggagcgcaaggttgccgtcctcggagctgctggtggcatcggccagcctttatccctgc 233 Query: 243 tcatgaagctgaaccccc 260 | |||||| ||||||||| Sbjct: 234 tgatgaagatgaaccccc 251
>emb|AL607145.28| Mouse DNA sequence from clone RP23-230I5 on chromosome 4, complete sequence Length = 147896 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 253 gaaccccctcgtctcctccctctccc 278 |||||||||||| ||||||||||||| Sbjct: 121446 gaaccccctcgtttcctccctctccc 121421
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 425 aggaagcccggcatgaccagggacgacct 453 |||||||| || ||||||||||||||||| Sbjct: 865107 aggaagccgggtatgaccagggacgacct 865135
>ref|XM_589329.2| PREDICTED: Bos taurus hypothetical LOC511902 (LOC511902), mRNA Length = 2370 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 cccctgccctggccaaggggt 353 ||||||||||||||||||||| Sbjct: 1996 cccctgccctggccaaggggt 1976
>gb|AC160931.2| Mus musculus BAC clone RP24-311F12 from chromosome 12, complete sequence Length = 167090 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 257 cccctcgtctcctccctctccctct 281 |||||| |||||||||||||||||| Sbjct: 70023 cccctcctctcctccctctccctct 69999
>gb|AC139673.9| Mus musculus chromosome 1, clone RP23-280I2, complete sequence Length = 263505 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 caactcccctgccctggccaa 348 ||||||||||||||||||||| Sbjct: 184066 caactcccctgccctggccaa 184046
>gb|AC091299.2| Danio rerio clone 126H19, complete sequence Length = 43673 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 215 ggtggcatcgggcagccgctgtctctcct 243 ||||||||||||||||| ||||| ||||| Sbjct: 39571 ggtggcatcgggcagccactgtccctcct 39599
>gb|AC114006.3| Mus musculus BAC clone RP23-185F9 from 17, complete sequence Length = 202882 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 257 cccctcgtctcctccctctccctct 281 |||||| |||||||||||||||||| Sbjct: 163377 cccctcctctcctccctctccctct 163353
>emb|BX035802.1|CNS08ZSE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA7BC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1015 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 203 cggtgcgtccggtggtatcggccagccgctgtc 235
>emb|BX028346.1|CNS08U1A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42BE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1013 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 169 cggtgcgtccggtggtatcggccagccgctgtc 201
>emb|BX026731.1|CNS08SSF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA40AE08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 991 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 206 cggtgcgtccggtggtatcggccagccgctgtc 238
>emb|BX024285.1|CNS08QWH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA37AB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 635 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 204 cggtgcgtccggtggtatcggccagccgctgtc 236
>emb|BX022183.1|CNS08PA3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA32DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 364 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 119 cggtgcgtccggtggtatcggccagccgctgtc 151
>emb|BX021516.1|CNS08ORK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA31DF06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 938 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 193 cggtgcgtccggtggtatcggccagccgctgtc 225
>emb|BX019273.1|CNS08N19 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA29BF01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 818 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 195 cggtgcgtccggtggtatcggccagccgctgtc 227
>emb|BX017946.1|CNS08M0E Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27AE07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 870 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 193 cggtgcgtccggtggtatcggccagccgctgtc 225
>emb|BX016160.1|CNS08KMS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA24BA05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 689 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 157 cggtgcgtccggtggtatcggccagccgctgtc 189
>emb|BX014788.1|CNS08JKO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA22BA04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 599 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 160 cggtgcgtccggtggtatcggccagccgctgtc 192
>emb|BX012981.1|CNS08I6H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA2CC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 911 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 162 cggtgcgtccggtggtatcggccagccgctgtc 194
>emb|BX012137.1|CNS08HJ1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA19BD01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 836 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 190 cggtgcgtccggtggtatcggccagccgctgtc 222
>emb|BX007494.1|CNS08DY2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA12CA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 986 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 184 cggtgcgtccggtggtatcggccagccgctgtc 216
>emb|X56607.1|KPHISFCY K.pneumoniae hisF gene for cyclase Length = 1052 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 catcaactcccctgccctggc 345 ||||||||||||||||||||| Sbjct: 525 catcaactcccctgccctggc 545
>gb|BC053272.1| Danio rerio zgc:64133, mRNA (cDNA clone MGC:64133 IMAGE:6796842), complete cds Length = 1443 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 215 ggtggcatcgggcagccgctgtctctcct 243 ||||||||||||||||| ||||| ||||| Sbjct: 181 ggtggcatcgggcagccactgtccctcct 209
>ref|XM_703690.1| PREDICTED: Danio rerio similar to malate dehydrogenase, mitochondrial, transcript variant 6 (LOC573488), mRNA Length = 1938 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 215 ggtggcatcgggcagccgctgtctctcct 243 ||||||||||||||||| ||||| ||||| Sbjct: 269 ggtggcatcgggcagccactgtccctcct 297
>ref|XM_703689.1| PREDICTED: Danio rerio similar to malate dehydrogenase, mitochondrial, transcript variant 5 (LOC573488), mRNA Length = 1893 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 215 ggtggcatcgggcagccgctgtctctcct 243 ||||||||||||||||| ||||| ||||| Sbjct: 269 ggtggcatcgggcagccactgtccctcct 297
>ref|XM_703688.1| PREDICTED: Danio rerio similar to malate dehydrogenase, mitochondrial, transcript variant 4 (LOC573488), mRNA Length = 1905 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 215 ggtggcatcgggcagccgctgtctctcct 243 ||||||||||||||||| ||||| ||||| Sbjct: 269 ggtggcatcgggcagccactgtccctcct 297
>ref|XM_703687.1| PREDICTED: Danio rerio similar to malate dehydrogenase, mitochondrial, transcript variant 3 (LOC573488), mRNA Length = 1836 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 215 ggtggcatcgggcagccgctgtctctcct 243 ||||||||||||||||| ||||| ||||| Sbjct: 200 ggtggcatcgggcagccactgtccctcct 228
>ref|XM_703686.1| PREDICTED: Danio rerio similar to malate dehydrogenase, mitochondrial, transcript variant 2 (LOC573488), mRNA Length = 1869 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 215 ggtggcatcgggcagccgctgtctctcct 243 ||||||||||||||||| ||||| ||||| Sbjct: 197 ggtggcatcgggcagccactgtccctcct 225
>ref|XM_682428.1| PREDICTED: Danio rerio similar to malate dehydrogenase, mitochondrial, transcript variant 1 (LOC573488), mRNA Length = 1908 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 215 ggtggcatcgggcagccgctgtctctcct 243 ||||||||||||||||| ||||| ||||| Sbjct: 269 ggtggcatcgggcagccactgtccctcct 297
>ref|XM_572013.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 1057 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 425 aggaagcccggcatgaccagggacgacct 453 |||||||| || ||||||||||||||||| Sbjct: 290 aggaagccgggtatgaccagggacgacct 318
>ref|NM_213131.1| Danio rerio zgc:64133 (zgc:64133), mRNA Length = 1443 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 215 ggtggcatcgggcagccgctgtctctcct 243 ||||||||||||||||| ||||| ||||| Sbjct: 181 ggtggcatcgggcagccactgtccctcct 209
>emb|BX088525.4| Zebrafish DNA sequence from clone DKEYP-51F8 in linkage group 10, complete sequence Length = 212133 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 215 ggtggcatcgggcagccgctgtctctcct 243 ||||||||||||||||| ||||| ||||| Sbjct: 75732 ggtggcatcgggcagccactgtccctcct 75704
>ref|XM_321163.2| Anopheles gambiae str. PEST ENSANGP00000020184 (ENSANGG00000017695), partial mRNA Length = 942 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 cggtgcggccggtggcatcgggcagccgctgtc 237 ||||||| ||||||| ||||| ||||||||||| Sbjct: 18 cggtgcgtccggtggtatcggccagccgctgtc 50
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 tcgtctcctccctctccctct 281 ||||||||||||||||||||| Sbjct: 1570706 tcgtctcctccctctccctct 1570726
>gb|AC150408.2| Branchiostoma floridae clone CH302-56A5, complete sequence Length = 180427 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 caactcccctgccctggcca 347 |||||||||||||||||||| Sbjct: 76302 caactcccctgccctggcca 76321 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 caactcccctgccctggcca 347 |||||||||||||||||||| Sbjct: 76092 caactcccctgccctggcca 76111
>ref|XM_480270.1| Oryza sativa (japonica cultivar-group), mRNA Length = 756 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ccgccgccgcagctactcctccgc 171 ||||||||||||| |||||||||| Sbjct: 56 ccgccgccgcagccactcctccgc 33
>gb|AC154392.18| Mus musculus chromosome 1, clone RP23-413K6, complete sequence Length = 205076 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tctcctccctctccctctac 283 |||||||||||||||||||| Sbjct: 7396 tctcctccctctccctctac 7415
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gcagcttctccgccgccgca 158 |||||||||||||||||||| Sbjct: 2358528 gcagcttctccgccgccgca 2358509
>ref|XM_424940.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 5830433M19 (LOC427364), mRNA Length = 1370 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 cgtccgggcagcaggagcgg 190 |||||||||||||||||||| Sbjct: 502 cgtccgggcagcaggagcgg 483
>ref|XM_616405.2| PREDICTED: Bos taurus hypothetical LOC536279 (LOC536279), mRNA Length = 1080 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ccgggcagcaggagcggaag 193 |||||||||||||||||||| Sbjct: 842 ccgggcagcaggagcggaag 861
>gb|AC109172.11| Mus musculus chromosome 14, clone RP23-279B8, complete sequence Length = 190469 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tctcctccctctccctctac 283 |||||||||||||||||||| Sbjct: 123917 tctcctccctctccctctac 123936
>gb|AC129333.4| Mus musculus BAC clone RP23-104F23 from 6, complete sequence Length = 216849 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tctcctccctctccctctac 283 |||||||||||||||||||| Sbjct: 11080 tctcctccctctccctctac 11099
>emb|AL672152.8| Mouse DNA sequence from clone RP23-426A16 on chromosome X, complete sequence Length = 200643 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tctcctccctctccctctac 283 |||||||||||||||||||| Sbjct: 50474 tctcctccctctccctctac 50493
>emb|AJ133131.3|MXA133131 Myxococcus xanthus phoR1 gene, pph2 gene and sixA gene Length = 5508 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cgggcagcaggagcggaagg 194 |||||||||||||||||||| Sbjct: 990 cgggcagcaggagcggaagg 971
>gb|AC113598.8| Mus musculus chromosome 14, clone RP23-476N23, complete sequence Length = 214461 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ccctcgtctcctccctctccctct 281 ||||| |||||||||||||||||| Sbjct: 5509 ccctcctctcctccctctccctct 5532
>emb|AL353802.14| Human DNA sequence from clone RP4-662P1 on chromosome 1p31.3-32.3 Contains part of the gene for InaD-like protein (INADL), complete sequence Length = 143226 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cccacatcaactcccctgcc 340 |||||||||||||||||||| Sbjct: 132968 cccacatcaactcccctgcc 132987
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence Length = 152828 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gagcggaaggtggccatcct 204 |||||||||||||||||||| Sbjct: 67219 gagcggaaggtggccatcct 67238
>gb|AY559195.1| Zea mays isolate bti00209 Ac insertion site Length = 440 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ccctcgtctcctccctctcc 277 |||||||||||||||||||| Sbjct: 94 ccctcgtctcctccctctcc 75
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 ggccgacctggtgatcatcccggc 414 ||||||| |||||||||||||||| Sbjct: 4827232 ggccgacgtggtgatcatcccggc 4827255
>emb|AL512583.11| Mouse DNA sequence from clone RP23-444H3 on chromosome 2, complete sequence Length = 181847 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gcaggagcggaaggtggccatcct 204 ||||||| |||||||||||||||| Sbjct: 20386 gcaggaggggaaggtggccatcct 20409
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.3 Identities = 47/56 (83%) Strand = Plus / Minus Query: 399 tggtgatcatcccggccggcgtcccgaggaagcccggcatgaccagggacgacctc 454 |||||||| || | |||||||| ||| | ||||||||||||| | | ||||||||| Sbjct: 318566 tggtgatcgtcaccgccggcgtaccgcgcaagcccggcatgagccgcgacgacctc 318511
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ccgccgccgcagctactcctccgc 171 ||||||||||||| |||||||||| Sbjct: 4000914 ccgccgccgcagccactcctccgc 4000891
>gb|AC153641.3| Mus musculus 6 BAC RP23-5F24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 193417 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 tctcctccctctccctctac 283 |||||||||||||||||||| Sbjct: 46779 tctcctccctctccctctac 46760
>gb|AC138710.5| Homo sapiens chromosome 17, clone RP11-822E23, complete sequence Length = 147089 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 aactcccctgccctggccaa 348 |||||||||||||||||||| Sbjct: 117957 aactcccctgccctggccaa 117976
>emb|BX934080.1| Gallus gallus finished cDNA, clone ChEST57f9 Length = 970 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 cgtccgggcagcaggagcgg 190 |||||||||||||||||||| Sbjct: 102 cgtccgggcagcaggagcgg 83
>emb|BX932541.1| Gallus gallus finished cDNA, clone ChEST596p20 Length = 950 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 cgtccgggcagcaggagcgg 190 |||||||||||||||||||| Sbjct: 83 cgtccgggcagcaggagcgg 64
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tcggtgcggccggtggcatc 223 |||||||||||||||||||| Sbjct: 8005520 tcggtgcggccggtggcatc 8005501
>gb|AE005002.1| Halobacterium sp. NRC-1 section 33 of 170 of the complete genome Length = 11214 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgatgaggtcctcggtgatg 127 |||||||||||||||||||| Sbjct: 6808 cgatgaggtcctcggtgatg 6827
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0462E11 Length = 166115 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ccgccgccgcagctactcctccgc 171 ||||||||||||| |||||||||| Sbjct: 88211 ccgccgccgcagccactcctccgc 88188
>ref|XM_556967.1| Anopheles gambiae str. PEST ENSANGP00000028037 (ENSANGG00000022662), partial mRNA Length = 936 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ggacgatcagctcgcggagg 380 |||||||||||||||||||| Sbjct: 264 ggacgatcagctcgcggagg 283
>gb|AC154846.2| Mus musculus BAC clone RP23-45E1 from 14, complete sequence Length = 250542 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 ccctcgtctcctccctctccctct 281 ||||| |||||||||||||||||| Sbjct: 89679 ccctcctctcctccctctccctct 89656
>gb|AC101702.11| Mus musculus chromosome 1, clone RP23-247G20, complete sequence Length = 178193 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 tctcctccctctccctctac 283 |||||||||||||||||||| Sbjct: 3275 tctcctccctctccctctac 3256
>emb|AJ875019.1| Streptoalloteichus hindustanus partial apramycin biosynthesis gene cluster, type strain DSM 44523T Length = 39979 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 391 ggccgacctggtgatcatcccggccggc 418 ||||||||||||||||| | |||||||| Sbjct: 16090 ggccgacctggtgatcagcgcggccggc 16117
>gb|L35530.1|HALHSP70A Halobacterium cutirubrum (clone 5) heat shock protein 70 (dnaK) gene, complete cds Length = 1947 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cgatgaggtcctcggtgatg 127 |||||||||||||||||||| Sbjct: 916 cgatgaggtcctcggtgatg 897
>emb|AL607041.18| Mouse DNA sequence from clone RP23-434K11 on chromosome 11, complete sequence Length = 198761 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ccctcgtctcctccctctccctct 281 ||||| |||||||||||||||||| Sbjct: 168662 ccctcctctcctccctctccctct 168685 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,225,169 Number of Sequences: 3902068 Number of extensions: 3225169 Number of successful extensions: 154298 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 153074 Number of HSP's gapped (non-prelim): 1207 length of query: 470 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 448 effective length of database: 17,147,199,772 effective search space: 7681945497856 effective search space used: 7681945497856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)