>HMOC_DROME (P22810) Homeotic protein ocelliless (Protein orthodenticle)|
          Length = 671

 Score = 35.0 bits (79), Expect = 0.081
 Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 8/131 (6%)
 Frame = +2

Query: 14  RPPSSHLLVEKPEGTP*VRDF-------PAM-ERWPTASVTARSTSGRRVCCRRQTTSHR 169
           RPP   +++    GT    +        PA   RW T ++  RST+   +   R T    
Sbjct: 474 RPPICPIMIRITSGTISTSNIRITMPRRPATTHRWSTLAIRIRSTTTWAI---RATRPPI 530

Query: 170 PTCAYRAHGG*APTASPCLRHPPTRTAPSSSRRFWPACRRTRASKHGT*WTTTHYGPYTS 349
             C +R      P+ +PC R P  RTA       W  CRR  +++    W   +     +
Sbjct: 531 LVCRHRH-----PSRAPCPRRPSPRTA-------WITCRRRISTRI---WCRIYSSNTAA 575

Query: 350 SAATTSSWRPQ 382
            AATT+  R Q
Sbjct: 576 VAATTTVQRGQ 586

>SMG1_HUMAN (Q96Q15) Serine/threonine-protein kinase SMG1 (EC 2.7.11.1) (SMG-1)|
           (hSMG-1) (Lambda/iota protein kinase C-interacting
           protein) (Lambda-interacting protein) (61E3.4)
          Length = 3657

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -2

Query: 203 LSRHAPGTRMSGGGW*FASCSRRACRSWNER*PKP*ATAPSRGNL 69
           +SR APG+R+S GG  ++       RSWN+  P+  + +   GNL
Sbjct: 1   MSRRAPGSRLSSGGTNYS-------RSWNDWQPRTDSASADPGNL 38

>AMYA_AERHY (P41131) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase)
          Length = 443

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +2

Query: 245 TAPSSSR--RFWPACRRTRASKHGT*WTTTHYGPYTSSAATTS 367
           ++PS++R  R+WP CRR+R +      T T +G  T++AA  S
Sbjct: 397 SSPSTTRAARWWPRCRRSRPAS-----TATSWGAMTTAAAVMS 434

>TIMD2_RAT (Q5FVR0) T-cell immunoglobulin and mucin domain-containing protein|
           2 precursor (TIMD-2) (T-cell membrane protein 2) (TIM-2)
          Length = 349

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
 Frame = +2

Query: 104 SVTARSTSGRRVCCRRQTTSHRPTCAYR-AHGG*APTASPCLRHPPTRTAPSSSRRFWPA 280
           + T  + +GR     R TT+ RPT   R    G   T S    H PT T  S+S    P 
Sbjct: 154 TTTRPTNTGRPTTTERPTTTGRPTTTERPTTTGRPTTISTRSTHVPTSTRVSTSTPPTPE 213

Query: 281 CRRTRASKHGT*WTTTHYGPYTSSAATTSSWRPQTE 388
             +T  S+      TT+Y   T++  T +     T+
Sbjct: 214 QTQTHRSE-----ATTYYPDQTTAEVTEAPSHTPTD 244

>3BP2_HUMAN (P78314) SH3 domain-binding protein 2 (3BP-2)|
          Length = 561

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 30/113 (26%), Positives = 38/113 (33%)
 Frame = +2

Query: 20  PSSHLLVEKPEGTP*VRDFPAMERWPTASVTARSTSGRRVCCRRQTTSHRPTCAYRAHGG 199
           P +H    K  G P +   P     P   + A  +    +C RR     R          
Sbjct: 221 PRAHSFTSKGPG-PLLPPPPPKHGLPDVGLAAEDSKRDPLCPRRAEPCPR---------- 269

Query: 200 *APTASPCLRHPPTRTAPSSSRRFWPACRRTRASKHGT*WTTTHYGPYTSSAA 358
             P     +  PP  T P++     P C R  AS     WT  H    TSSAA
Sbjct: 270 -VPATPRRMSDPPLSTMPTAPGLRKPPCFRESASPSPEPWTPGHGACSTSSAA 321

>VG32_BPML5 (Q05241) Gene 32 protein (Gp32)|
          Length = 220

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
 Frame = -1

Query: 252 GAVRVGGWRRHGDAVGAQPPCARYAHVGRWLVVCLLQQTRLPLVERAVTEAVGHRSIAGK 73
           G     GW R GDA             G W +V L +   +PL  + +T  VG    AG 
Sbjct: 75  GMALADGWGRGGDA-------------GSWAIVTLERGVHIPLSTKTITGLVGAGGAAGA 121

Query: 72  SLTY----GVPSGFST 37
              +    G P G +T
Sbjct: 122 GSVFSGKAGGPGGNTT 137

>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor|
          Length = 1161

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 2/113 (1%)
 Frame = +2

Query: 95  PTASVTARS--TSGRRVCCRRQTTSHRPTCAYRAHGG*APTASPCLRHPPTRTAPSSSRR 268
           PT S T+ +  TS         TTS  PT +  +     PT S     P T T P++S  
Sbjct: 180 PTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTST---TPTTSTTSTTPTTSTTPTTSTT 236

Query: 269 FWPACRRTRASKHGT*WTTTHYGPYTSSAATTSSWRPQTEPXXXXXXXXXXDT 427
              +   T+++   T  T+T     T+   +T+S  P T             T
Sbjct: 237 STTSQTSTKSTTPTTSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTSTIST 289

>IF2_PSE14 (Q48E77) Translation initiation factor IF-2|
          Length = 843

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 199 AAMRPVRACRAVAGSLP-PAADAPAARGTSGDRSRRPPLHRGE 74
           AA  PVR   A A + P PA+ AP+A     D  RRP   R +
Sbjct: 152 AAAEPVREAPAPAAAAPAPASAAPSADARKRDEQRRPDKPRAD 194

>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +2

Query: 95  PTASVTARSTSGRRV-CCRRQTTSHRPTCAYRAHGG*APTASPCLRHPPTRTAPSSSR 265
           PT + T  S S     CCRR+     PT A+    G  PTA+   +    R+A +  R
Sbjct: 197 PTPAPTCASPSAAASSCCRRRRACSSPTTAWSGACGAGPTAATAAQPGKPRSAAAPGR 254



 Score = 30.4 bits (67), Expect = 2.0
 Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 10/111 (9%)
 Frame = +2

Query: 89  RWPTASVTARSTSGRRVCCRRQTTSHR--PTCAYRAH------GG*APTASPCLRHPPTR 244
           RWP A    R     +  C     S R  P C+YR           APT +P    P   
Sbjct: 150 RWPRAGRRGRRAGACKPSCAGAAWSARGAPLCSYRTSCAGSCGARTAPTPAPTCASP--- 206

Query: 245 TAPSSSRRFWPACRRTRA-SKHGT*WT-TTHYGPYTSSAATTSSWRPQTEP 391
           +A +SS      CRR RA S   T W+     GP  ++AA     R    P
Sbjct: 207 SAAASS-----CCRRRRACSSPTTAWSGACGAGPTAATAAQPGKPRSAAAP 252

>SGS3_DROER (P13730) Salivary glue protein Sgs-3 precursor|
          Length = 328

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 30/93 (32%), Positives = 37/93 (39%)
 Frame = +2

Query: 86  ERWPTASVTARSTSGRRVCCRRQTTSHRPTCAYRAHGG*APTASPCLRHPPTRTAPSSSR 265
           +R  T   T R+T+ +R   RR TT   PT   R     A T     R   TR AP+   
Sbjct: 109 KRATTRRTTVRATT-KRATTRRTTTKRAPT--RRTTTKRATTRRNPTRRTTTRRAPTKRA 165

Query: 266 RFWPACRRTRASKHGT*WTTTHYGPYTSSAATT 364
               A  R   +K  T   TT     T+  ATT
Sbjct: 166 TTKRATTRRNPTKRKTTRRTTVRATKTTKRATT 198

>CD68_HUMAN (P34810) Macrosialin precursor (GP110) (CD68 antigen)|
          Length = 354

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
 Frame = +2

Query: 77  PAMERWPTASVTARSTSGRRVCCRRQTTSHRPTCAYRAHGG*APTASPC------LRHPP 238
           P+    PT + +  +TS R     + TT    T    +HG    T +P       +   P
Sbjct: 34  PSFTVTPTVTESTGTTSHRTTKSHKTTTHRTTTTGTTSHGPTTATHNPTTTSHGNVTVHP 93

Query: 239 TRTAPSSSRRFWPACRRTRASKHGT*WTTTHYGPYTSSAAT----TSSWRPQTEPXXXXX 406
           T  + ++S+    A      + HG    T H  P ++S AT    TSS  P+  P     
Sbjct: 94  TSNSTATSQGPSTATHSPATTSHGN--ATVH--PTSNSTATSPGFTSSAHPEPPPPSPSP 149

Query: 407 XXXXXDTI 430
                +TI
Sbjct: 150 SPTSKETI 157

>TENS1_BOVIN (Q9GLM4) Tensin-1|
          Length = 1715

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
 Frame = +3

Query: 246 PPHRVRGGSGRLAVGRVPASTVRSGQPHTMDRILLVPPRR-------AVGVHKQSPNAEG 404
           PP   RGGS R AV R   S  +  Q     +    PPR+       ++G+ + SP    
Sbjct: 630 PPAPARGGSSREAVQRGLNSWQQQQQQQQQQQQPRPPPRQQERVHLESLGLSRPSPQPLA 689

Query: 405 APQLGGTP 428
            P + G P
Sbjct: 690 EPPMSGLP 697

>PGCA_BOVIN (P13608) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2364

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +3

Query: 270  SGRLAVGRVPASTVRSGQPHTMDRILLVPPRRAVGVHKQSPNAEGAPQLGGTPS 431
            SG L +GR+P+ T+ SGQ      +         GV  +S  + G P   G PS
Sbjct: 1421 SGALDLGRIPSVTLGSGQAPEASGLPSGFSGEYSGVDLESGPSSGLPDFSGLPS 1474

>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)|
          Length = 3164

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +2

Query: 203  APTASPCLRHPPTRTAP---SSSRRFWPACRRTRASKHGT*WTTTHYGPYTSSAATTSSW 373
            +P +SP    PP  TAP   +SSR    +   +RA +H            T ++ATT  W
Sbjct: 2651 SPQSSPA---PPDATAPRPPASSRASAASSSGSRARRHRR---ARSLARATQASATTQGW 2704

Query: 374  RPQTEP 391
            RP   P
Sbjct: 2705 RPPALP 2710

>MOBA1_ECOLI (P08098) Mobilization protein A (Protein B)|
          Length = 529

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
 Frame = -1

Query: 246 VRVGGWRRHGDAVGAQPP--CARYAHVGRWLVVCLLQQTRLPLVERAVT 106
           +R GGW  HG   G       AR A  G WL  CL +    P   R  T
Sbjct: 32  IRPGGWSGHGGMSGTTRTGVTARLAFWGGWLSPCLSRAGEKPSCVRTST 80

>MOACB_SYNP7 (Q56208) Molybdenum cofactor biosynthesis bifunctional protein|
           [Includes: Molybdenum cofactor biosynthesis protein C;
           Molybdenum cofactor biosynthesis protein B]
          Length = 319

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 20/75 (26%), Positives = 32/75 (42%)
 Frame = -1

Query: 300 LARVLRQAGQNRLELDGAVRVGGWRRHGDAVGAQPPCARYAHVGRWLVVCLLQQTRLPLV 121
           +   LRQAG++   +    R GGW   G  V A P  +R    G  ++  LL  +     
Sbjct: 251 IGEALRQAGRSETVMTWLSRSGGWMLEGSFVIALPGSSRAVSSGLAMLQPLLPHS----- 305

Query: 120 ERAVTEAVGHRSIAG 76
             A+ +   H ++ G
Sbjct: 306 -LAILKGADHGTVKG 319

>CCDC9_MOUSE (Q8VC31) Coiled-coil domain-containing protein 9|
          Length = 543

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 25/79 (31%), Positives = 28/79 (35%)
 Frame = +3

Query: 105 RSPLVPRAAGASAAGGKLPATARHARTGRMAAEHXXXXXXXXXXXXGPPHRVRGGSGRLA 284
           R+P  PR  GAS  G   P     A  GR  A              GP     GG GR  
Sbjct: 78  RTPGTPRPPGASRGGRTHPQQGGRAGVGR--ASQGWEDGAGEQLRGGP-----GGRGRRG 130

Query: 285 VGRVPASTVRSGQPHTMDR 341
            GR     + +G   T DR
Sbjct: 131 RGRGSPHLLGAGDNSTSDR 149

>GLSA_STRCO (P57755) Glutaminase (EC 3.5.1.2)|
          Length = 307

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -1

Query: 315 YVPCLLARVLRQAGQNRLELDGAV-RVGGWR 226
           Y+P L AR  R+ G    ELDG V  VG WR
Sbjct: 30  YIPALAARDPRRFGMAVAELDGTVYGVGDWR 60

>IF2_PROMP (Q7UZZ9) Translation initiation factor IF-2|
          Length = 1169

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 243 GPPHRVRGGSGRLAVGRVPASTVRSGQPHTM--DRILLVPPRRAVGVHKQ-SPNAEGAPQ 413
           G P+R  GG  R      P +  R G P+         VP R   G ++Q SPN  G P 
Sbjct: 294 GVPNR-EGGPYRQGSPNRPGTPYRQGAPNRPGGQNRQGVPNREGGGPYRQGSPNRPGTPN 352

Query: 414 LGGTP 428
             GTP
Sbjct: 353 RPGTP 357

>SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor|
          Length = 263

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 31/96 (32%), Positives = 42/96 (43%)
 Frame = +2

Query: 98  TASVTARSTSGRRVCCRRQTTSHRPTCAYRAHGG*APTASPCLRHPPTRTAPSSSRRFWP 277
           T   T +ST+ R     RQTT+ RPT                     T T  +++RR  P
Sbjct: 73  TKRTTEKSTTRRTTTTTRQTTT-RPT--------------------TTTTTTTTTRR--P 109

Query: 278 ACRRTRASKHGT*WTTTHYGPYTSSAATTSSWRPQT 385
             R T  ++H T  TTT   P T+   TT++ RP T
Sbjct: 110 TTRST-TTRHTTTTTTTTRRPTTT---TTTTRRPTT 141

>POLS_EEEV3 (P27284) Structural polyprotein (p130) [Contains: Capsid protein (EC|
            3.4.21.-) (Coat protein) (C); p62 (E3/E2); E3 protein
            (Spike glycoprotein E3); E2 envelope glycoprotein (Spike
            glycoprotein E2); 6K protein; E1 envelope glycoprotein
            (Spike g
          Length = 1240

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 205  CSAAMRPVRACRAVAGSLPPAADAPAARGT 116
            CS A+ P+RA     GS+P + D P A  T
Sbjct: 1059 CSIALEPLRAENCAVGSIPISIDIPDAAFT 1088

>CI005_HUMAN (Q9H330) Protein C9orf5 (Protein CG-2)|
          Length = 911

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 108 SPLVPRAAGASAAGGKLPATA 170
           +P VPRA G S  GG+ P TA
Sbjct: 20  APRVPRAVGPSGGGGETPRTA 40

>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein|
          Length = 1509

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 294 VPASTVRSGQPHTMDRILLVPPRRAVGVHKQSPNAEGAP 410
           VPAS + S  P   D     P  +  G+  Q+P+++ +P
Sbjct: 667 VPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASP 705

>SOX3_MOUSE (P53784) Transcription factor SOX-3|
          Length = 375

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
 Frame = +3

Query: 126 AAGASAAGGKLPATARHARTGRMAAEHXXXXXXXXXXXXGPPHRVRGGSGRLAVG--RVP 299
           AA A+AA G+ PATA  A     A                PP  +R  S R  +G  R  
Sbjct: 270 AAAAAAAYGQQPATAAAAAAAAAAMSLGPMGSVVKSEPSSPPPAIRSHSQRACLGDLRDM 329

Query: 300 ASTVRSGQPHTMDRILLVPPRRAVGVHKQSPNA 398
            S          D    +P  R  GVH+    A
Sbjct: 330 ISMYLPPGGDAADAASPLPGGRLHGVHQHYQGA 362

>MCL1_CANFA (Q8HYS5) Induced myeloid leukemia cell differentiation protein|
           Mcl-1 homolog
          Length = 350

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
 Frame = +3

Query: 126 AAGASAAGGKLPATARHARTGRMAAEHXXXXXXXXXXXXGPPHRVRGGSGRLAVGRVPAS 305
           + GAS++GG+L A+ R A T R                  PP  +   + R+A    P  
Sbjct: 25  SGGASSSGGRLLASGREATTRREGGGGEAGAVIGGSAGASPPTTLAPDARRVA-RPSPIG 83

Query: 306 TVRSGQPHTMDRILLV-PPRRA 368
                   T  R+LL+ PP RA
Sbjct: 84  AEGPNVSATPPRLLLLAPPCRA 105

>PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2333

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 19/63 (30%), Positives = 24/63 (38%)
 Frame = +3

Query: 243  GPPHRVRGGSGRLAVGRVPASTVRSGQPHTMDRILLVPPRRAVGVHKQSPNAEGAPQLGG 422
            G    +   SG L  GR+P+ T+ SGQ      +         GV   S    G P   G
Sbjct: 1374 GKEDLIGSASGALDFGRIPSGTLGSGQAPEASSLPSGFSGEYSGVDFGSGPISGLPDFSG 1433

Query: 423  TPS 431
             PS
Sbjct: 1434 LPS 1436

>DNAJ_DEIPR (O34136) Chaperone protein dnaJ|
          Length = 307

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
 Frame = +1

Query: 67  ERFPRDGAVAYGFGHRSFHERQARLLQEANYQP--PPDMRVPGAWRLSTDGXXXXXXXSD 240
           ++F   G V      R    R+ R ++    Q   P D+R PG W  S  G       S 
Sbjct: 67  DQFGHTGQVPPALPRRRLSGRRLRRVRPQPVQRLFPGDVRGPGRWHGSRGG-----FTSP 121

Query: 241 ADRPIEFEAVLAGL 282
             RPI+ E +  GL
Sbjct: 122 DGRPIDLEDLFGGL 135

>DDHD1_BOVIN (O46606) Probable phospholipase DDHD1 (EC 3.1.1.-) (DDHD domain|
           protein 1) (Phosphatidic acid-preferring phospholipase
           A1) (PA-PLA1)
          Length = 875

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 105 RSPLVPRAAGASAAGGKLPATARHARTGRMAAEH 206
           + PLVP  +G   A G  P   +  R G  AA H
Sbjct: 122 QQPLVPSNSGGGGAAGGGPGERKRTRPGGAAARH 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,250,545
Number of Sequences: 219361
Number of extensions: 1604830
Number of successful extensions: 5453
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5447
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)