ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast57b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3... 30 1.7
2FULI_ACHFU (P35905) Fulicin precursor [Contains: Fulicin; Fucili... 30 2.9
3HIS2_THET2 (P62350) Histidine biosynthesis bifunctional protein ... 29 4.9
4IBP1_HUMAN (P08833) Insulin-like growth factor-binding protein 1... 28 8.3
5DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltrans... 28 8.3
6DCOR_MUSPA (P27119) Ornithine decarboxylase (EC 4.1.1.17) (ODC) 28 8.3

>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)|
          Length = 474

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
 Frame = +2

Query: 104 AVAVTGTRTVAPAK-TKVTLATFDLPYIT-----FYYNQKLLLYRL----AEGAGDFQDV 253
           AV V    T+ P   T   L  F+L  +      +YY   +L Y      + G+ +  D 
Sbjct: 8   AVEVISKETIKPTTPTPSQLKNFNLSLLDQCFPLYYYVPIILFYPATAANSTGSSNHHDD 67

Query: 254 TARMADALGDALAYFYPLAGRI 319
              +  +L   L +FYP+AGR+
Sbjct: 68  LDLLKSSLSKTLVHFYPMAGRM 89



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>FULI_ACHFU (P35905) Fulicin precursor [Contains: Fulicin; Fucilin gene-related|
           peptide 1 (FGRP-1); Fucilin gene-related peptide 2
           (FGRP-2); Fucilin gene-related peptide 3 (FGRP-3);
           Fucilin gene-related peptide 4 (FGRP-4); Fucilin
           gene-related peptide 5 (
          Length = 357

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +2

Query: 119 GTRTVAPAKTKVTLATFDLPYITFYYNQKLLLYRLAEGAGDFQDVTARMADALG 280
           G  TV+P+ TK++     LPY++            +  AGD  DV  R A+ LG
Sbjct: 265 GVFTVSPSSTKISFDDNYLPYLS------------SVDAGDLSDVNKRYAEFLG 306



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>HIS2_THET2 (P62350) Histidine biosynthesis bifunctional protein hisIE|
           [Includes: Phosphoribosyl-AMP cyclohydrolase (EC
           3.5.4.19) (PRA-CH); Phosphoribosyl-ATP pyrophosphatase
           (EC 3.6.1.31) (PRA-PH)]
          Length = 214

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +2

Query: 128 TVAPAKTKVTLATFDLPYITFYYNQKLLLYRLAEGAGDFQDVTARMADALGDALAY 295
           T+A A  +    T      TF+   +  L+R  E +G  Q+V   + D  GDA+ Y
Sbjct: 28  TLAYANREALEETLRTRRSTFFSRSRQALWRKGETSGHTQEVVEVLLDCDGDAVVY 83



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>IBP1_HUMAN (P08833) Insulin-like growth factor-binding protein 1 precursor|
           (IGFBP-1) (IBP-1) (IGF-binding protein 1) (Placental
           protein 12) (PP12)
          Length = 259

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -2

Query: 165 VARVTLVLAGATVRVPVTATA-MTAARASPLSTAXCCLILGS*CELRASVSGVCC 4
           VARV LVL   TV+V VTA A    A  S    A C  +  S  E+  S    CC
Sbjct: 6   VARVWLVLLLLTVQVGVTAGAPWQCAPCSAEKLALCPPVSASCSEVTRSAGCGCC 60



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>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC|
           2.3.1.-) (DBTNBT)
          Length = 441

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 269 DALGDALAYFYPLAGRIRQEK 331
           +AL   L Y++PLAGR+R ++
Sbjct: 67  EALSKVLVYYFPLAGRLRSKE 87



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>DCOR_MUSPA (P27119) Ornithine decarboxylase (EC 4.1.1.17) (ODC)|
          Length = 461

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 47  PKIKQXMAVDNGDARAAVMAVAVTGTRTVAPAKTKVTL 160
           P++    AV   D+RA V  +A TGT     +KT++ L
Sbjct: 60  PRVTPFYAVKCNDSRAIVSTLAATGTGFDCASKTEIQL 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,537,448
Number of Sequences: 219361
Number of extensions: 365651
Number of successful extensions: 1462
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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