ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast57b07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_471731.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 167 bits (84), Expect = 4e-38 Identities = 225/272 (82%) Strand = Plus / Plus Query: 153 caggaggacctcaagcgcgtcgccgcgcaccgcgccgtcgacatggtggagtccgacatg 212 |||||||| || ||||| || || |||||||| ||||| || ||||||||| ||| ||| Sbjct: 100 caggaggagctgaagcgggtggcggcgcaccgggccgtggagatggtggagcccgggatg 159 Query: 213 acgctggggctcggcaccggctccacggccgcgcacgcgctcgaccgcctcggggacctc 272 |||||||| |||||||| |||||||| || || |||||||| ||||||||||| |||||| Sbjct: 160 acgctgggcctcggcacgggctccaccgcggcccacgcgctggaccgcctcggcgacctc 219 Query: 273 ctccgcaccggcgcgcttcgcggggtcgccggggtgcccacctccctcaagacggaggcg 332 ||||| |||| | ||| || ||| ||||| || || ||||| ||||||||||||||| Sbjct: 220 ctccggtccggggagctcgccgcggtggccggcgtcccgacctcgctcaagacggaggcg 279 Query: 333 cacgccgcgcgcgtcgggatccccatgctcgcgctcgccgacgccgccgagatccacctc 392 |||||||| | || |||||||| ||||| |||||| || || | || |||| | || Sbjct: 280 cacgccgccagggtggggatcccgatgctgccgctcggggaggcgggcgggatcgatctg 339 Query: 393 tccatcgacggcgccgacgaggtcgacccgga 424 |||||||||||||||||||||||||||||||| Sbjct: 340 tccatcgacggcgccgacgaggtcgacccgga 371
>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03, complete sequence Length = 175555 Score = 167 bits (84), Expect = 4e-38 Identities = 225/272 (82%) Strand = Plus / Plus Query: 153 caggaggacctcaagcgcgtcgccgcgcaccgcgccgtcgacatggtggagtccgacatg 212 |||||||| || ||||| || || |||||||| ||||| || ||||||||| ||| ||| Sbjct: 68516 caggaggagctgaagcgggtggcggcgcaccgggccgtggagatggtggagcccgggatg 68575 Query: 213 acgctggggctcggcaccggctccacggccgcgcacgcgctcgaccgcctcggggacctc 272 |||||||| |||||||| |||||||| || || |||||||| ||||||||||| |||||| Sbjct: 68576 acgctgggcctcggcacgggctccaccgcggcccacgcgctggaccgcctcggcgacctc 68635 Query: 273 ctccgcaccggcgcgcttcgcggggtcgccggggtgcccacctccctcaagacggaggcg 332 ||||| |||| | ||| || ||| ||||| || || ||||| ||||||||||||||| Sbjct: 68636 ctccggtccggggagctcgccgcggtggccggcgtcccgacctcgctcaagacggaggcg 68695 Query: 333 cacgccgcgcgcgtcgggatccccatgctcgcgctcgccgacgccgccgagatccacctc 392 |||||||| | || |||||||| ||||| |||||| || || | || |||| | || Sbjct: 68696 cacgccgccagggtggggatcccgatgctgccgctcggggaggcgggcgggatcgatctg 68755 Query: 393 tccatcgacggcgccgacgaggtcgacccgga 424 |||||||||||||||||||||||||||||||| Sbjct: 68756 tccatcgacggcgccgacgaggtcgacccgga 68787
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 167 bits (84), Expect = 4e-38 Identities = 225/272 (82%) Strand = Plus / Plus Query: 153 caggaggacctcaagcgcgtcgccgcgcaccgcgccgtcgacatggtggagtccgacatg 212 |||||||| || ||||| || || |||||||| ||||| || ||||||||| ||| ||| Sbjct: 13854857 caggaggagctgaagcgggtggcggcgcaccgggccgtggagatggtggagcccgggatg 13854916 Query: 213 acgctggggctcggcaccggctccacggccgcgcacgcgctcgaccgcctcggggacctc 272 |||||||| |||||||| |||||||| || || |||||||| ||||||||||| |||||| Sbjct: 13854917 acgctgggcctcggcacgggctccaccgcggcccacgcgctggaccgcctcggcgacctc 13854976 Query: 273 ctccgcaccggcgcgcttcgcggggtcgccggggtgcccacctccctcaagacggaggcg 332 ||||| |||| | ||| || ||| ||||| || || ||||| ||||||||||||||| Sbjct: 13854977 ctccggtccggggagctcgccgcggtggccggcgtcccgacctcgctcaagacggaggcg 13855036 Query: 333 cacgccgcgcgcgtcgggatccccatgctcgcgctcgccgacgccgccgagatccacctc 392 |||||||| | || |||||||| ||||| |||||| || || | || |||| | || Sbjct: 13855037 cacgccgccagggtggggatcccgatgctgccgctcggggaggcgggcgggatcgatctg 13855096 Query: 393 tccatcgacggcgccgacgaggtcgacccgga 424 |||||||||||||||||||||||||||||||| Sbjct: 13855097 tccatcgacggcgccgacgaggtcgacccgga 13855128 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 244 cgcacgcgctcgaccgcctcgg 265 |||||||||||||||||||||| Sbjct: 27160403 cgcacgcgctcgaccgcctcgg 27160382 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cgccgccgcgggccctcgacgcggc 148 ||||||||| ||||||||||||||| Sbjct: 18891610 cgccgccgccggccctcgacgcggc 18891634
>dbj|AK103443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129E13, full insert sequence Length = 1182 Score = 167 bits (84), Expect = 4e-38 Identities = 225/272 (82%) Strand = Plus / Plus Query: 153 caggaggacctcaagcgcgtcgccgcgcaccgcgccgtcgacatggtggagtccgacatg 212 |||||||| || ||||| || || |||||||| ||||| || ||||||||| ||| ||| Sbjct: 210 caggaggagctgaagcgggtggcggcgcaccgggccgtggagatggtggagcccgggatg 269 Query: 213 acgctggggctcggcaccggctccacggccgcgcacgcgctcgaccgcctcggggacctc 272 |||||||| |||||||| |||||||| || || |||||||| ||||||||||| |||||| Sbjct: 270 acgctgggcctcggcacgggctccaccgcggcccacgcgctggaccgcctcggcgacctc 329 Query: 273 ctccgcaccggcgcgcttcgcggggtcgccggggtgcccacctccctcaagacggaggcg 332 ||||| |||| | ||| || ||| ||||| || || ||||| ||||||||||||||| Sbjct: 330 ctccggtccggggagctcgccgcggtggccggcgtcccgacctcgctcaagacggaggcg 389 Query: 333 cacgccgcgcgcgtcgggatccccatgctcgcgctcgccgacgccgccgagatccacctc 392 |||||||| | || |||||||| ||||| |||||| || || | || |||| | || Sbjct: 390 cacgccgccagggtggggatcccgatgctgccgctcggggaggcgggcgggatcgatctg 449 Query: 393 tccatcgacggcgccgacgaggtcgacccgga 424 |||||||||||||||||||||||||||||||| Sbjct: 450 tccatcgacggcgccgacgaggtcgacccgga 481
>ref|NM_126190.1| Arabidopsis thaliana ribose-5-phosphate isomerase AT2G01290 mRNA, complete cds Length = 1464 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 390 ctctccatcgacggcgccgacgaggtcgaccc 421 ||||||||||||||||| |||||||||||||| Sbjct: 727 ctctccatcgacggcgcagacgaggtcgaccc 758
>ref|XM_476827.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 388 acctctccatcgacggcgccgacgaggtcgacccggacct 427 ||||| ||||||||||||||||||||||||| || ||||| Sbjct: 479 acctcgccatcgacggcgccgacgaggtcgatccagacct 518
>ref|XM_476826.1| Oryza sativa (japonica cultivar-group), mRNA Length = 957 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 388 acctctccatcgacggcgccgacgaggtcgacccggacct 427 ||||| ||||||||||||||||||||||||| || ||||| Sbjct: 358 acctcgccatcgacggcgccgacgaggtcgatccagacct 397
>gb|DQ446450.1| Arabidopsis thaliana clone pENTR221-At2g01290 unknown (At2g01290) gene, complete cds Length = 798 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 390 ctctccatcgacggcgccgacgaggtcgaccc 421 ||||||||||||||||| |||||||||||||| Sbjct: 334 ctctccatcgacggcgcagacgaggtcgaccc 365
>gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete sequence Length = 94029 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 390 ctctccatcgacggcgccgacgaggtcgaccc 421 ||||||||||||||||| |||||||||||||| Sbjct: 59252 ctctccatcgacggcgcagacgaggtcgaccc 59221
>gb|AY066038.1| Arabidopsis thaliana At2g01290/F10A8.17 mRNA, complete cds Length = 798 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 390 ctctccatcgacggcgccgacgaggtcgaccc 421 ||||||||||||||||| |||||||||||||| Sbjct: 334 ctctccatcgacggcgcagacgaggtcgaccc 365
>gb|AY054172.1| Arabidopsis thaliana At2g01290/F10A8.17 mRNA, complete cds Length = 1464 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 390 ctctccatcgacggcgccgacgaggtcgaccc 421 ||||||||||||||||| |||||||||||||| Sbjct: 727 ctctccatcgacggcgcagacgaggtcgaccc 758
>emb|BX819220.1|CNS0A82P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1350 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 390 ctctccatcgacggcgccgacgaggtcgaccc 421 ||||||||||||||||| |||||||||||||| Sbjct: 703 ctctccatcgacggcgcagacgaggtcgaccc 734
>dbj|AK067117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094G20, full insert sequence Length = 955 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 388 acctctccatcgacggcgccgacgaggtcgacccggacct 427 ||||| ||||||||||||||||||||||||| || ||||| Sbjct: 356 acctcgccatcgacggcgccgacgaggtcgatccagacct 395
>dbj|AK060861.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G01, full insert sequence Length = 1077 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 388 acctctccatcgacggcgccgacgaggtcgacccggacct 427 ||||| ||||||||||||||||||||||||| || ||||| Sbjct: 479 acctcgccatcgacggcgccgacgaggtcgatccagacct 518
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 112 gcagcgccgcctcgccgccgcgggcc 137 |||||||||||||||||||||||||| Sbjct: 2773000 gcagcgccgcctcgccgccgcgggcc 2772975 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cagcgccgcctcgccgccgc 132 |||||||||||||||||||| Sbjct: 1654361 cagcgccgcctcgccgccgc 1654342
>dbj|AB070943.1| Streptomyces avermitilis polyketide-3 biosynthetic gene cluster Length = 16832 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 112 gcagcgccgcctcgccgccgcgggcc 137 |||||||||||||||||||||||||| Sbjct: 673 gcagcgccgcctcgccgccgcgggcc 648
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 388 acctctccatcgacggcgccgacgaggtc 416 ||||| ||||||||||||||||||||||| Sbjct: 4101808 acctcgccatcgacggcgccgacgaggtc 4101780 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcgccgcctcgccgccgcgg 134 |||||||||||||||||||| Sbjct: 7951768 gcgccgcctcgccgccgcgg 7951787
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 388 acctctccatcgacggcgccgacgaggtc 416 ||||| ||||||||||||||||||||||| Sbjct: 94666 acctcgccatcgacggcgccgacgaggtc 94638
>gb|AY108727.1| Zea mays PCO087551 mRNA sequence Length = 739 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 388 acctctccatcgacggcgccgacgaggtcgacccggacctc 428 ||||| |||||||||| ||||||||||| ||||| |||||| Sbjct: 85 acctcgccatcgacggtgccgacgaggttgaccctgacctc 125
>gb|AC120984.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0026G02, complete sequence Length = 123472 Score = 46.1 bits (23), Expect = 0.093 Identities = 29/31 (93%) Strand = Plus / Minus Query: 385 tccacctctccatcgacggcgccgacgaggt 415 ||||||| |||||||||||||||||| |||| Sbjct: 105592 tccacctgtccatcgacggcgccgaccaggt 105562 Score = 46.1 bits (23), Expect = 0.093 Identities = 29/31 (93%) Strand = Plus / Minus Query: 385 tccacctctccatcgacggcgccgacgaggt 415 ||||||| |||||||||||||||||| |||| Sbjct: 85810 tccacctgtccatcgacggcgccgaccaggt 85780
>gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0088K21, complete sequence Length = 153239 Score = 46.1 bits (23), Expect = 0.093 Identities = 29/31 (93%) Strand = Plus / Minus Query: 385 tccacctctccatcgacggcgccgacgaggt 415 ||||||| |||||||||||||||||| |||| Sbjct: 4509 tccacctgtccatcgacggcgccgaccaggt 4479
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 394 ccatcgacggcgccgacgaggtcgacc 420 |||||||||| |||||||||||||||| Sbjct: 138434 ccatcgacggtgccgacgaggtcgacc 138460
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.093 Identities = 29/31 (93%) Strand = Plus / Minus Query: 385 tccacctctccatcgacggcgccgacgaggt 415 ||||||| |||||||||||||||||| |||| Sbjct: 22744792 tccacctgtccatcgacggcgccgaccaggt 22744762 Score = 46.1 bits (23), Expect = 0.093 Identities = 29/31 (93%) Strand = Plus / Minus Query: 385 tccacctctccatcgacggcgccgacgaggt 415 ||||||| |||||||||||||||||| |||| Sbjct: 22725010 tccacctgtccatcgacggcgccgaccaggt 22724980 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 cggaggcgcacgccgcgcgc 344 |||||||||||||||||||| Sbjct: 17313242 cggaggcgcacgccgcgcgc 17313223
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.093 Identities = 29/31 (93%) Strand = Plus / Minus Query: 385 tccacctctccatcgacggcgccgacgaggt 415 ||||||| |||||||||||||||||| |||| Sbjct: 23054702 tccacctgtccatcgacggcgccgaccaggt 23054672 Score = 46.1 bits (23), Expect = 0.093 Identities = 29/31 (93%) Strand = Plus / Minus Query: 385 tccacctctccatcgacggcgccgacgaggt 415 ||||||| |||||||||||||||||| |||| Sbjct: 23034921 tccacctgtccatcgacggcgccgaccaggt 23034891 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 cggaggcgcacgccgcgcgc 344 |||||||||||||||||||| Sbjct: 17406877 cggaggcgcacgccgcgcgc 17406858
>ref|XM_473374.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2028 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 244 cgcacgcgctcgaccgcctcgg 265 |||||||||||||||||||||| Sbjct: 281 cgcacgcgctcgaccgcctcgg 302
>gb|AY512582.1| Oryza sativa iron transport protein 2 mRNA, complete cds Length = 2028 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 244 cgcacgcgctcgaccgcctcgg 265 |||||||||||||||||||||| Sbjct: 281 cgcacgcgctcgaccgcctcgg 302
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 236 cacggccgcgcacgcgctcgac 257 |||||||||||||||||||||| Sbjct: 874103 cacggccgcgcacgcgctcgac 874082
>emb|CR726333.2|CNS0GNDV Tetraodon nigroviridis full-length cDNA Length = 1367 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 ccatcgacggcgccgacgaggt 415 |||||||||||||||||||||| Sbjct: 339 ccatcgacggcgccgacgaggt 360
>emb|CR724496.2|CNS0GLYU Tetraodon nigroviridis full-length cDNA Length = 1367 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 ccatcgacggcgccgacgaggt 415 |||||||||||||||||||||| Sbjct: 337 ccatcgacggcgccgacgaggt 358
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 111 ggcagcgccgcctcgccgccgcgggc 136 ||||||||||||| |||||||||||| Sbjct: 4800286 ggcagcgccgcctggccgccgcgggc 4800311
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08, complete sequence Length = 140449 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 244 cgcacgcgctcgaccgcctcgg 265 |||||||||||||||||||||| Sbjct: 103046 cgcacgcgctcgaccgcctcgg 103025
>dbj|AB190924.1| Oryza sativa (japonica cultivar-group) osysl16 mRNA for hypothetical protein, complete cds Length = 2028 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 244 cgcacgcgctcgaccgcctcgg 265 |||||||||||||||||||||| Sbjct: 281 cgcacgcgctcgaccgcctcgg 302
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 gggcagcgccgcctcgccgccg 131 |||||||||||||||||||||| Sbjct: 7031301 gggcagcgccgcctcgccgccg 7031322 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 aaaccctcgccccccgcgccgcca 108 |||||||||| ||||||||||||| Sbjct: 21254833 aaaccctcgcaccccgcgccgcca 21254810
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 gggcagcgccgcctcgccgccg 131 |||||||||||||||||||||| Sbjct: 52088 gggcagcgccgcctcgccgccg 52109
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 gggcagcgccgcctcgccgccg 131 |||||||||||||||||||||| Sbjct: 90728 gggcagcgccgcctcgccgccg 90749
>dbj|AK070785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065D10, full insert sequence Length = 1739 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 110 gggcagcgccgcctcgccgccg 131 |||||||||||||||||||||| Sbjct: 1210 gggcagcgccgcctcgccgccg 1189
>dbj|AK070304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049B02, full insert sequence Length = 2472 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 244 cgcacgcgctcgaccgcctcgg 265 |||||||||||||||||||||| Sbjct: 437 cgcacgcgctcgaccgcctcgg 458
>ref|XM_506941.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ2056_H01.33 mRNA Length = 1619 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 ctccaagaaaccctcgccccc 98 ||||||||||||||||||||| Sbjct: 29 ctccaagaaaccctcgccccc 49
>ref|XM_467494.1| Oryza sativa (japonica cultivar-group), mRNA Length = 474 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 ctccaagaaaccctcgccccc 98 ||||||||||||||||||||| Sbjct: 93 ctccaagaaaccctcgccccc 73
>gb|DQ213181.1| Taeniopygia guttata clone 0058P0050G02 mRNA sequence Length = 785 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 cagcgccgcctcgccgccgcg 133 ||||||||||||||||||||| Sbjct: 155 cagcgccgcctcgccgccgcg 175
>ref|XM_470289.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1827 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 tcgcgctcgccgacgccgccg 381 ||||||||||||||||||||| Sbjct: 1106 tcgcgctcgccgacgccgccg 1126
>ref|XM_957749.1| Neurospora crassa OR74A hypothetical protein (NCU07608.1) partial mRNA Length = 852 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 397 tcgacggcgccgacgaggtcgaccc 421 |||||||||||||||| |||||||| Sbjct: 296 tcgacggcgccgacgaagtcgaccc 320
>ref|XM_328313.1| Neurospora crassa OR74A hypothetical protein (NCU07608.1) partial mRNA Length = 852 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 397 tcgacggcgccgacgaggtcgaccc 421 |||||||||||||||| |||||||| Sbjct: 296 tcgacggcgccgacgaagtcgaccc 320
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 ccatgctcgcgctcgccgacg 375 ||||||||||||||||||||| Sbjct: 2664757 ccatgctcgcgctcgccgacg 2664737
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 aggacctcaagcgcgtcgccg 177 ||||||||||||||||||||| Sbjct: 3051593 aggacctcaagcgcgtcgccg 3051573
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tcgcgctcgccgacgccgccg 381 ||||||||||||||||||||| Sbjct: 3684336 tcgcgctcgccgacgccgccg 3684316 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccgcgccgtcgacatggtgg 201 |||||||||||||||||||| Sbjct: 35077582 ccgcgccgtcgacatggtgg 35077563 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcgccgcctcgccgccgcgg 134 |||||||||||||||||||| Sbjct: 32439768 gcgccgcctcgccgccgcgg 32439787
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 gcagcgccgcctcgccgccgc 132 ||||||||||||||||||||| Sbjct: 3562267 gcagcgccgcctcgccgccgc 3562247
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 223 tcggcaccggctccacggccgcgcacgcg 251 |||||||||||| || ||||||||||||| Sbjct: 50098 tcggcaccggcttcaaggccgcgcacgcg 50126
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tcgccgcgcaccgcgccgtcg 192 ||||||||||||||||||||| Sbjct: 193127 tcgccgcgcaccgcgccgtcg 193147
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 cgcgtcgccgcgcaccgcgccgtcg 192 ||||||||||||||||| ||||||| Sbjct: 59504 cgcgtcgccgcgcaccgggccgtcg 59528
>emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084N21, complete sequence Length = 143093 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 cgccgccgcgggccctcgacgcggc 148 ||||||||| ||||||||||||||| Sbjct: 107520 cgccgccgccggccctcgacgcggc 107544
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 394 ccatcgacggcgccgacgaggtcga 418 ||||||| ||||||||||||||||| Sbjct: 182584 ccatcgatggcgccgacgaggtcga 182608
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 399 gacggcgccgacgaggtcgacccgg 423 |||||||||||||||||||| |||| Sbjct: 2489158 gacggcgccgacgaggtcgatccgg 2489134
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 tcgcgctcgccgacgccgccg 381 ||||||||||||||||||||| Sbjct: 97041 tcgcgctcgccgacgccgccg 97061
>ref|NM_166594.1| Drosophila melanogaster CG30410-RA (CG30410), mRNA Length = 970 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 394 ccatcgacggcgccgacgaggtcga 418 |||||||||| |||||||||||||| Sbjct: 391 ccatcgacggggccgacgaggtcga 415
>gb|AY586576.1| Parmotrema cetratum voucher H.S. Osorio 9424 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 520 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 260 cctcggggacctcctccgcaccggc 284 |||||||| |||||||||||||||| Sbjct: 91 cctcgggggcctcctccgcaccggc 115
>gb|AY642847.1| Parmotrema cetratum voucher H.S. Osorio 9425 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 520 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 260 cctcggggacctcctccgcaccggc 284 |||||||| |||||||||||||||| Sbjct: 90 cctcgggggcctcctccgcaccggc 114
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tcgcgctcgccgacgccgccg 381 ||||||||||||||||||||| Sbjct: 3684447 tcgcgctcgccgacgccgccg 3684427 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccgcgccgtcgacatggtgg 201 |||||||||||||||||||| Sbjct: 35167654 ccgcgccgtcgacatggtgg 35167635 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcgccgcctcgccgccgcgg 134 |||||||||||||||||||| Sbjct: 32530278 gcgccgcctcgccgccgcgg 32530297
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 ctccaagaaaccctcgccccc 98 ||||||||||||||||||||| Sbjct: 29840455 ctccaagaaaccctcgccccc 29840475 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 cgacggcgccgacgaggtcg 417 |||||||||||||||||||| Sbjct: 2824773 cgacggcgccgacgaggtcg 2824792
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ccatcgacggcgccgacgagg 414 ||||||||||||||||||||| Sbjct: 28839814 ccatcgacggcgccgacgagg 28839834 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cgccgcctcgccgccgcggg 135 |||||||||||||||||||| Sbjct: 5237317 cgccgcctcgccgccgcggg 5237336
>gb|AC008304.3|AC008304 Drosophila melanogaster, chromosome 2R, region 59D2-59D3, BAC clone BACR04G19, complete sequence Length = 181955 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 394 ccatcgacggcgccgacgaggtcga 418 |||||||||| |||||||||||||| Sbjct: 123602 ccatcgacggggccgacgaggtcga 123626
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 gccgcgcacgcgctcgaccgc 260 ||||||||||||||||||||| Sbjct: 203330 gccgcgcacgcgctcgaccgc 203310 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 gggcagcgccgcctcgccgccgcg 133 ||||||| |||||||||||||||| Sbjct: 1139168 gggcagctccgcctcgccgccgcg 1139145
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_H09 Length = 110086 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ccatcgacggcgccgacgagg 414 ||||||||||||||||||||| Sbjct: 57857 ccatcgacggcgccgacgagg 57877
>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2056_H01 Length = 123428 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 ctccaagaaaccctcgccccc 98 ||||||||||||||||||||| Sbjct: 96800 ctccaagaaaccctcgccccc 96820
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tcgcgctcgccgacgccgccg 381 ||||||||||||||||||||| Sbjct: 4794009 tcgcgctcgccgacgccgccg 4793989 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 cacctctccatcgacggcgccgac 410 |||||| ||||||||||||||||| Sbjct: 5911867 cacctcaccatcgacggcgccgac 5911890 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 cgccgcgcaccgcgccgtcg 192 |||||||||||||||||||| Sbjct: 2612997 cgccgcgcaccgcgccgtcg 2613016
>dbj|AK073448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045A20, full insert sequence Length = 1618 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 ctccaagaaaccctcgccccc 98 ||||||||||||||||||||| Sbjct: 28 ctccaagaaaccctcgccccc 48
>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like protein, putative DNA-binding protein homolog, TATA-binding protein, hypothetical protein M3E9.200, 3-glucanase, K-exchanger-like protein, small heat shock-like protein, methionine synthase protein, putative far-red impaired response protein, and putative vegetative storage protein genes, complete cds Length = 100773 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 cgccgccgcgggccctcgacg 144 ||||||||||||||||||||| Sbjct: 70585 cgccgccgcgggccctcgacg 70565
>gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68 of 73 of the complete sequence Length = 299331 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 394 ccatcgacggcgccgacgaggtcga 418 |||||||||| |||||||||||||| Sbjct: 176079 ccatcgacggggccgacgaggtcga 176103
>ref|NM_188250.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cgccgcctcgccgccgcggg 135 |||||||||||||||||||| Sbjct: 792 cgccgcctcgccgccgcggg 811
>ref|XM_483738.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1775 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ctcgccgccgcgggccctcg 141 |||||||||||||||||||| Sbjct: 1399 ctcgccgccgcgggccctcg 1380
>ref|XM_483737.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2606 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ctcgccgccgcgggccctcg 141 |||||||||||||||||||| Sbjct: 2168 ctcgccgccgcgggccctcg 2149
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 agcgccgcctcgccgccgcg 133 |||||||||||||||||||| Sbjct: 182169 agcgccgcctcgccgccgcg 182150
>ref|NM_186801.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1818 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcgccgcctcgccgccgcgg 134 |||||||||||||||||||| Sbjct: 251 gcgccgcctcgccgccgcgg 270
>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete sequence Length = 113193 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tcgccgacgccgccgagatc 386 |||||||||||||||||||| Sbjct: 23640 tcgccgacgccgccgagatc 23659
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 209 catgacgctggggctcggcaccggctccacggccgc 244 ||||| |||||| |||||||||||||| || ||||| Sbjct: 2090762 catgaagctgggcctcggcaccggctcgaccgccgc 2090727
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 atgggcagcgccgcctcgccgccg 131 ||||||| |||||||||||||||| Sbjct: 3734740 atgggcaacgccgcctcgccgccg 3734763
>gb|AY562554.1| Serinus canaria zenk transcription factor (zenk) gene, partial cds Length = 1557 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ccgccatgggcagcgccgcc 122 |||||||||||||||||||| Sbjct: 358 ccgccatgggcagcgccgcc 339
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 cggaggcgcacgccgcgcgc 344 |||||||||||||||||||| Sbjct: 41949 cggaggcgcacgccgcgcgc 41930
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 cggaggcgcacgccgcgcgc 344 |||||||||||||||||||| Sbjct: 67942 cggaggcgcacgccgcgcgc 67923
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cgctcgccgacgccgccgag 383 |||||||||||||||||||| Sbjct: 276422 cgctcgccgacgccgccgag 276403 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 cgccgacgaggtcgacccggacct 427 |||||||||| ||||||||||||| Sbjct: 74442 cgccgacgagttcgacccggacct 74419
>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete sequence Length = 130272 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ccgcgccgtcgacatggtgg 201 |||||||||||||||||||| Sbjct: 78483 ccgcgccgtcgacatggtgg 78464
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcgccgcctcgccgccgcgg 134 |||||||||||||||||||| Sbjct: 91896 gcgccgcctcgccgccgcgg 91915
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 392 ctccatcgacggcgccgacgaggtcgac 419 ||||||||||| || ||||||||||||| Sbjct: 18480 ctccatcgacgacgacgacgaggtcgac 18507
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 cgacgccgccgagatccacc 390 |||||||||||||||||||| Sbjct: 41681 cgacgccgccgagatccacc 41662
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tcggcaccggctccacggcc 242 |||||||||||||||||||| Sbjct: 5754038 tcggcaccggctccacggcc 5754057
>ref|NM_014640.2| Homo sapiens tubulin tyrosine ligase-like family, member 4 (TTLL4), mRNA Length = 4208 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ggctcggcaccggctccacg 239 |||||||||||||||||||| Sbjct: 96 ggctcggcaccggctccacg 77
>gb|AY609134.1| Cuon alpinus isolate RPPH1Cal179314 RNase P RNA (RPPH1) gene, complete sequence Length = 586 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 101 cgccgccatgggcagcgccgcctcgccgccgc 132 ||||||| ||||||||||||||| ||||||| Sbjct: 106 cgccgccctgggcagcgccgccttcccgccgc 75
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tcggcaccggctccacggcc 242 |||||||||||||||||||| Sbjct: 5550040 tcggcaccggctccacggcc 5550059
>gb|AC009974.10| Homo sapiens BAC clone RP11-459I19 from 2, complete sequence Length = 206855 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ggctcggcaccggctccacg 239 |||||||||||||||||||| Sbjct: 49099 ggctcggcaccggctccacg 49080
>gb|AC092143.4| Homo sapiens chromosome 16 clone RP11-566K11, complete sequence Length = 146534 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ggggtgcccacctccctcaa 322 |||||||||||||||||||| Sbjct: 142585 ggggtgcccacctccctcaa 142566
>gb|AF259474.1| Platyclinia taylorii clone ptay27xii97 large subunit ribosomal RNA gene, partial sequence Length = 1335 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tccacctctccatcgacggc 404 |||||||||||||||||||| Sbjct: 1269 tccacctctccatcgacggc 1288
>gb|AF259473.1| Platyclinia taylorii clone ptay26xii97 large subunit ribosomal RNA gene, partial sequence Length = 1339 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tccacctctccatcgacggc 404 |||||||||||||||||||| Sbjct: 1271 tccacctctccatcgacggc 1290
>gb|AF259472.1| Platyclinia taylorii clone ptay6i95 large subunit ribosomal RNA gene, partial sequence Length = 1339 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tccacctctccatcgacggc 404 |||||||||||||||||||| Sbjct: 1271 tccacctctccatcgacggc 1290
>gb|BC013869.2| Homo sapiens cDNA clone IMAGE:3831740, partial cds Length = 2792 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ggctcggcaccggctccacg 239 |||||||||||||||||||| Sbjct: 86 ggctcggcaccggctccacg 67
>emb|BX296564.7| Human DNA sequence from clone DASS-256O6 on chromosome 6, complete sequence Length = 74846 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggggtgcccacctccct 319 |||||||||||||||||||| Sbjct: 60033 gccggggtgcccacctccct 60052
>emb|AL732578.5| Human DNA sequence from clone RP11-421K1 on chromosome X Contains the 5' end of the GPR64 gene for G protein-coupled receptor 64 and a CpG island, complete sequence Length = 191318 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 cgccgagatccacctctcca 396 |||||||||||||||||||| Sbjct: 123632 cgccgagatccacctctcca 123651
>emb|AL669918.5| Human DNA sequence from clone XXbac-246D15 on chromosome 6 contains the HLA-DOB gene for major histocompatibility complex, class II, DO beta, the TAP2 gene for transporter 2, ATP-binding cassette, subfamily B (MDR/TAP), the PSMB8 gene for proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional protease 7), the TAP1 gene for transporter 1, ATP-binding cassette, sub-family B (MDR/TAP), the PSMB9 gene for proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2), a novel protein similar to protein phosphatase 1, regulatory (inhibitor) subunit 2 and two CpG islands, complete sequence Length = 126988 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggggtgcccacctccct 319 |||||||||||||||||||| Sbjct: 9671 gccggggtgcccacctccct 9690
>emb|AL671681.4| Human DNA sequence from clone XXbac-32M13 on chromosome 6 contains the 5' end of the HLA-DQB2 gene for major histocompatibility complex, class II, DQ beta 2, the HLA-DOB gene for major histocompatibility complex, class II, DO beta, the TAP2 gene for transporter 2, ATP-binding cassette, subfamily B (MDR/TAP), the PSMB8 gene for proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional protease 7), the TAP1 gene for transporter 1, ATP-binding cassette, sub-family B (MDR/TAP), the PSMB9 gene for proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2), the gene for a novel protein similar to protein phosphatase 1, regulatory (inhibitor) subunit 2 and three CpG islands, complete sequence Length = 166803 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggggtgcccacctccct 319 |||||||||||||||||||| Sbjct: 50550 gccggggtgcccacctccct 50569
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 cagcgccgcctcgccgccgc 132 |||||||||||||||||||| Sbjct: 187846 cagcgccgcctcgccgccgc 187865
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gctcgccgacgccgccgaga 384 |||||||||||||||||||| Sbjct: 4322700 gctcgccgacgccgccgaga 4322681 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 gacggcgccgacgaggtcga 418 |||||||||||||||||||| Sbjct: 2304016 gacggcgccgacgaggtcga 2304035
>gb|BT009432.1| Triticum aestivum clone wlmk1.pk0037.b8:fis, full insert mRNA sequence Length = 2324 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cgccgacgccgccgagatcc 387 |||||||||||||||||||| Sbjct: 87 cgccgacgccgccgagatcc 106
>gb|BC021707.2| Homo sapiens tubulin tyrosine ligase-like family, member 4, mRNA (cDNA clone MGC:26119 IMAGE:4824604), complete cds Length = 4208 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ggctcggcaccggctccacg 239 |||||||||||||||||||| Sbjct: 96 ggctcggcaccggctccacg 77
>emb|AJ575648.1|STH575648 Streptomyces thioluteus aureothin biosynthesis gene cluster (aurABCDEFGHI genes), strain HKI-22 Length = 29132 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 397 tcgacggcgccgacgaggtcgacccggacctc 428 |||||||||||| |||| ||||| |||||||| Sbjct: 15539 tcgacggcgccgccgagttcgacgcggacctc 15570
>gb|AC161939.4| Mus musculus 10 BAC RP24-364P6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162031 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 cggggtcgccggggtgcccacctc 316 ||||||| |||||||||||||||| Sbjct: 135182 cggggtccccggggtgcccacctc 135205
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccccccgcgccgccatgggc 113 |||||||||||||||||||| Sbjct: 3310855 ccccccgcgccgccatgggc 3310836
>emb|CR752661.4| Human DNA sequence from clone DAMA-273O23 on chromosome 6, complete sequence Length = 31181 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggggtgcccacctccct 319 |||||||||||||||||||| Sbjct: 26450 gccggggtgcccacctccct 26469
>emb|CR788227.4| Human DNA sequence from clone DADB-156N11 on chromosome 6, complete sequence Length = 57074 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggggtgcccacctccct 319 |||||||||||||||||||| Sbjct: 47237 gccggggtgcccacctccct 47256
>emb|CR762476.2| Human DNA sequence from clone DAAP-57C1 on chromosome 6, complete sequence Length = 95554 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggggtgcccacctccct 319 |||||||||||||||||||| Sbjct: 36239 gccggggtgcccacctccct 36258
>gb|AF478945.1| Acanthus spinosus internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 615 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 cgccgcgcaccgcgccgtcg 192 |||||||||||||||||||| Sbjct: 548 cgccgcgcaccgcgccgtcg 567
>emb|CR759848.2| Human DNA sequence from clone DAMC-176M21 on chromosome 6, complete sequence Length = 104881 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gccggggtgcccacctccct 319 |||||||||||||||||||| Sbjct: 100392 gccggggtgcccacctccct 100411
>dbj|AB247562.1| Marsupenaeus japonicus PDH-3 mRNA for pigment-dispersing hormone 3, complete cds Length = 417 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gcggcgacgcaggaggacctcaag 167 |||||| ||||||||||||||||| Sbjct: 73 gcggcggcgcaggaggacctcaag 96
>gb|AE005900.1| Caulobacter crescentus CB15 section 226 of 359 of the complete genome Length = 14916 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ggcaccggctccacggccgc 244 |||||||||||||||||||| Sbjct: 12413 ggcaccggctccacggccgc 12394
>gb|AF169757.1| Acanthus spinosus 18S ribosomal RNA, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA, partial sequence Length = 676 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 cgccgcgcaccgcgccgtcg 192 |||||||||||||||||||| Sbjct: 579 cgccgcgcaccgcgccgtcg 598
>gb|AF169756.1| Acanthus montanus 18S ribosomal RNA, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA, partial sequence Length = 672 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 cgccgcgcaccgcgccgtcg 192 |||||||||||||||||||| Sbjct: 576 cgccgcgcaccgcgccgtcg 595
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cgcaccgcgccgtcgacatggtgg 201 |||||||||||| ||||||||||| Sbjct: 44849 cgcaccgcgccggcgacatggtgg 44872
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 tcgccgcgcaccgcgccgtcgaca 195 ||||||||||| |||||||||||| Sbjct: 4128094 tcgccgcgcacggcgccgtcgaca 4128071 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cgtcgccgcgcaccgcgccg 189 |||||||||||||||||||| Sbjct: 1380558 cgtcgccgcgcaccgcgccg 1380539 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gctcgccgacgccgccgaga 384 |||||||||||||||||||| Sbjct: 1368055 gctcgccgacgccgccgaga 1368036
>dbj|AK163726.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930070C22 product:thyrotropin-releasing hormone degrading ectoenzyme, full insert sequence Length = 3560 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 cggggtcgccggggtgcccacctc 316 ||||||| |||||||||||||||| Sbjct: 1371 cggggtccccggggtgcccacctc 1348
>gb|AY581056.1| Parmotrema pilosum from Uruguay 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 527 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 cctcggggacctcctccgcaccgg 283 |||||||| ||||||||||||||| Sbjct: 91 cctcgggggcctcctccgcaccgg 114
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gctcgccgacgccgccgaga 384 |||||||||||||||||||| Sbjct: 4743833 gctcgccgacgccgccgaga 4743814
>dbj|AK085724.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730028C14 product:THYROTROPIN-RELEASING HORMONE DEGRADING ECTOENZYME (EC 3.4.19.6) (TRH- DEGRADING ECTOENZYME) (TRH-DE) (TRH-SPECIFIC AMINOPEPTIDASE) (THYROLIBERINASE) (PYROGLUTAMYL-PEPTIDASE II) (PAP-II) homolog [Rattus norvegicus], full insert sequence Length = 1578 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 cggggtcgccggggtgcccacctc 316 ||||||| |||||||||||||||| Sbjct: 435 cggggtccccggggtgcccacctc 412
>gb|AC160408.6| Mus musculus 10 BAC RP23-116I16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210970 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 cggggtcgccggggtgcccacctc 316 ||||||| |||||||||||||||| Sbjct: 19101 cggggtccccggggtgcccacctc 19078
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 ccgcctcgccgccgcgggcc 137 |||||||||||||||||||| Sbjct: 22203265 ccgcctcgccgccgcgggcc 22203246 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 388 acctctccatcgacggcgccgacgaggt 415 ||||| |||||||||||||| ||||||| Sbjct: 8816764 acctcgccatcgacggcgccaacgaggt 8816737
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ctcgccgccgcgggccctcg 141 |||||||||||||||||||| Sbjct: 27839953 ctcgccgccgcgggccctcg 27839934
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 392 ctccatcgacggcgccgacgaggtcgac 419 ||||||||||| || ||||||||||||| Sbjct: 28490787 ctccatcgacgacgacgacgaggtcgac 28490814
>gb|BC032288.1| Mus musculus TRH-degrading enzyme, mRNA (cDNA clone MGC:40831 IMAGE:5368580), complete cds Length = 5539 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 cggggtcgccggggtgcccacctc 316 ||||||| |||||||||||||||| Sbjct: 438 cggggtccccggggtgcccacctc 415
>gb|AC133919.3| Homo sapiens chromosome 16 clone RP11-356C4, complete sequence Length = 210446 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ggggtgcccacctccctcaa 322 |||||||||||||||||||| Sbjct: 39958 ggggtgcccacctccctcaa 39939
>emb|BX833856.1|CNS09Z9O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL7ZG01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 565 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aaaaatcccccacctcccgt 57 |||||||||||||||||||| Sbjct: 161 aaaaatcccccacctcccgt 180
>gb|AE004737.1| Pseudomonas aeruginosa PAO1, section 298 of 529 of the complete genome Length = 13469 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcagcgccgcctcgccgccg 131 |||||||||||||||||||| Sbjct: 7261 gcagcgccgcctcgccgccg 7242
>gb|AE004467.1| Pseudomonas aeruginosa PAO1, section 28 of 529 of the complete genome Length = 12795 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 391 tctccatcgacggcgccgacgaggtcgacccg 422 |||||||||||| |||| ||||| |||||||| Sbjct: 10431 tctccatcgacgccgccaacgagttcgacccg 10462
>ref|NM_019141.1| Rattus norvegicus transducin-like enhancer of split 4, E(spl) homolog (Drosophila) (Tle4), mRNA Length = 2561 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 cgccgccgcgggccctcgacgcgg 147 ||||||||||||||||||| |||| Sbjct: 104 cgccgccgcgggccctcgaagcgg 127
>gb|L14463.1|RATESP2A Rattus norvegicus R-esp2 mRNA, complete cds Length = 2561 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 cgccgccgcgggccctcgacgcgg 147 ||||||||||||||||||| |||| Sbjct: 104 cgccgccgcgggccctcgaagcgg 127
>dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01 Length = 149610 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cgccgcctcgccgccgcggg 135 |||||||||||||||||||| Sbjct: 32568 cgccgcctcgccgccgcggg 32587
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 397 tcgacggcgccgacgaggtcgacccgga 424 ||||||||||||| |||||||| ||||| Sbjct: 389601 tcgacggcgccgatgaggtcgatccgga 389574
>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0656E03 Length = 181786 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 aaaccctcgccccccgcgccgcca 108 |||||||||| ||||||||||||| Sbjct: 50209 aaaccctcgcaccccgcgccgcca 50186
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 cgacggcgccgacgaggtcg 417 |||||||||||||||||||| Sbjct: 93001 cgacggcgccgacgaggtcg 93020
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ctcgccgccgcgggccctcg 141 |||||||||||||||||||| Sbjct: 48031 ctcgccgccgcgggccctcg 48012
>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0418E08 Length = 141040 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcgccgcctcgccgccgcgg 134 |||||||||||||||||||| Sbjct: 68127 gcgccgcctcgccgccgcgg 68146
>dbj|AK120536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129B17, full insert sequence Length = 2063 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cgacggcgccgacgaggtcg 417 |||||||||||||||||||| Sbjct: 1776 cgacggcgccgacgaggtcg 1757
>dbj|AK099715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013085B05, full insert sequence Length = 2606 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ctcgccgccgcgggccctcg 141 |||||||||||||||||||| Sbjct: 2168 ctcgccgccgcgggccctcg 2149
>dbj|AK107732.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-F10, full insert sequence Length = 922 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 392 ctccatcgacggcgccgacgaggtcgac 419 ||||||||||| || ||||||||||||| Sbjct: 129 ctccatcgacgacgacgacgaggtcgac 102
>dbj|AK107347.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-G11, full insert sequence Length = 1818 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcgccgcctcgccgccgcgg 134 |||||||||||||||||||| Sbjct: 251 gcgccgcctcgccgccgcgg 270
>dbj|AK106793.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-A11, full insert sequence Length = 1775 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ctcgccgccgcgggccctcg 141 |||||||||||||||||||| Sbjct: 1399 ctcgccgccgcgggccctcg 1380
>dbj|AK101059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022A10, full insert sequence Length = 4115 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ccgcctcgccgccgcgggcc 137 |||||||||||||||||||| Sbjct: 306 ccgcctcgccgccgcgggcc 325
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 388 acctctccatcgacggcgccgacgaggt 415 ||||| |||||||||| ||||||||||| Sbjct: 2292854 acctcgccatcgacggggccgacgaggt 2292827
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.7 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 145 cggcgacgcaggaggacctcaagcgcgtcgccgcgc 180 |||||||| |||||||||||||| |||| ||||||| Sbjct: 1891085 cggcgacg-aggaggacctcaagggcgtggccgcgc 1891119
>dbj|AK065205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F11, full insert sequence Length = 969 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 cggaggcgcacgccgcgcgc 344 |||||||||||||||||||| Sbjct: 385 cggaggcgcacgccgcgcgc 366
>gb|AF139107.1|AF139107 Pseudomonas aeruginosa hypothetical multidrug resistance protein (mdr) gene, partial cds; hypothetical transcriptional activator (act) and glutamyl-tRNA synthetase (gltX) genes, complete cds; and tRNA-Ala and tRNA-Glu genes, complete sequence Length = 3892 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcagcgccgcctcgccgccg 131 |||||||||||||||||||| Sbjct: 2339 gcagcgccgcctcgccgccg 2358
>dbj|AB085745.1| Streptomyces griseus orf1, orf2, sgmA, orf4 genes for putative mono-oxygenase, hypothetical protein, metalloendopeptidase, possible secreted protein, partial and complete cds Length = 5194 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgcgctcgaccgcctcgggg 267 |||||||||||||||||||| Sbjct: 577 cgcgctcgaccgcctcgggg 558
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 cgccgcgcaccgcgccgtcg 192 |||||||||||||||||||| Sbjct: 3249428 cgccgcgcaccgcgccgtcg 3249447
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 gcgctcgccgacgccgccga 382 |||||||||||||||||||| Sbjct: 987106 gcgctcgccgacgccgccga 987087
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gcgctcgccgacgccgccga 382 |||||||||||||||||||| Sbjct: 1600002 gcgctcgccgacgccgccga 1600021
>emb|AL833511.1|HSM804824 Homo sapiens mRNA; cDNA DKFZp686E1237 (from clone DKFZp686E1237) Length = 3949 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ggctcggcaccggctccacg 239 |||||||||||||||||||| Sbjct: 61 ggctcggcaccggctccacg 42
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 ccgcctcgccgccgcgggcc 137 |||||||||||||||||||| Sbjct: 22131610 ccgcctcgccgccgcgggcc 22131591 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 388 acctctccatcgacggcgccgacgaggt 415 ||||| |||||||||||||| ||||||| Sbjct: 8816647 acctcgccatcgacggcgccaacgaggt 8816620
>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151176 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 388 acctctccatcgacggcgccgacgaggt 415 ||||| |||||||||||||| ||||||| Sbjct: 5393 acctcgccatcgacggcgccaacgaggt 5366
>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155585 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ccgcctcgccgccgcgggcc 137 |||||||||||||||||||| Sbjct: 49745 ccgcctcgccgccgcgggcc 49764
>emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa0036A15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 195500 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 388 acctctccatcgacggcgccgacgaggt 415 ||||| |||||||||||||| ||||||| Sbjct: 25405 acctcgccatcgacggcgccaacgaggt 25432
>emb|AM181043.1| Nocardia farcinica IFM 10152 partial dnaB gene including Ssp DnaB intein Length = 1278 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 cacctctccatcgacggcgccgac 410 |||||| ||||||||||||||||| Sbjct: 835 cacctcaccatcgacggcgccgac 858
>ref|NM_146241.1| Mus musculus TRH-degrading enzyme (Trhde), mRNA Length = 5539 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 cggggtcgccggggtgcccacctc 316 ||||||| |||||||||||||||| Sbjct: 438 cggggtccccggggtgcccacctc 415
>emb|X87344.1|HSEVMHC H.sapiens DMA, DMB, HLA-Z1, IPP2, LMP2, TAP1, LMP7, TAP2, DOB, DQB2 and RING8, 9, 13 and 14 genes Length = 198285 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gccggggtgcccacctccct 319 |||||||||||||||||||| Sbjct: 147188 gccggggtgcccacctccct 147169
>dbj|AB215250.1| Equus caballus DNA, microsatellite TKY1307 Length = 244 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ccggggtgcccacctccctc 320 |||||||||||||||||||| Sbjct: 69 ccggggtgcccacctccctc 88
>dbj|AB059748.1| Halobacterium sp. AUS-1 aus1pR gene for phoborhodopsin, complete cds Length = 980 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 cgcgcacgcgctcgaccgcctcgg 265 |||| ||||||||||||||||||| Sbjct: 741 cgcggacgcgctcgaccgcctcgg 764
>emb|AL607123.22| Mouse DNA sequence from clone RP23-391E6 on chromosome 4, complete sequence Length = 149369 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcgccgcctcgccgccgcgg 134 |||||||||||||||||||| Sbjct: 126357 gcgccgcctcgccgccgcgg 126376 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,187,246 Number of Sequences: 3902068 Number of extensions: 3187246 Number of successful extensions: 93054 Number of sequences better than 10.0: 162 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 83347 Number of HSP's gapped (non-prelim): 9700 length of query: 428 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 406 effective length of database: 17,147,199,772 effective search space: 6961763107432 effective search space used: 6961763107432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
