Clone Information

BLAST Search Result

Clone Name	bast57b04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FXL17_MOUSE (Q9QZN1) F-box/LRR-repeat protein 17 (F-box and leuc...	48	1e-05
2	SKP2_HUMAN (Q13309) S-phase kinase-associated protein 2 (F-box p...	44	2e-04
3	SKP2_MOUSE (Q9Z0Z3) S-phase kinase-associated protein 2 (F-box p...	42	6e-04
4	MAF_MOUSE (P54843) Transcription factor Maf (Proto-oncogene c-maf)	34	0.13
5	FBX6_MOUSE (Q9QZN4) F-box only protein 6 (F-box only protein 6b)	34	0.16
6	FBXL3_MOUSE (Q8C4V4) F-box/LRR-repeat protein 3 (F-box/LRR-repea...	34	0.16
7	FBXW5_HUMAN (Q969U6) F-box/WD-repeat protein 5 (F-box and WD-40 ...	33	0.21
8	YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 pre...	33	0.37
9	FXL14_HUMAN (Q8N1E6) F-box/LRR-repeat protein 14 (F-box and leuc...	32	0.48
10	FBXW5_MOUSE (Q9QXW2) F-box/WD-repeat protein 5 (F-box and WD-40 ...	32	0.48
11	FXL14_MOUSE (Q8BID8) F-box/LRR-repeat protein 14 (F-box and leuc...	32	0.48
12	FBXL3_HUMAN (Q9UKT7) F-box/LRR-repeat protein 3 (F-box/LRR-repea...	32	0.62
13	FBX6_RAT (Q923V4) F-box only protein 6 (F-box only protein 6b) (...	32	0.81
14	FBX39_RAT (Q66H10) F-box only protein 39	32	0.81
15	FBX2_MOUSE (Q80UW2) F-box only protein 2	32	0.81
16	FBX39_MOUSE (Q5NBU5) F-box only protein 39	31	1.1
17	ASF1_HELAN (P22357) Anther-specific protein SF18 precursor (Frag...	31	1.1
18	EMAP_STRPU (Q26613) 77 kDa echinoderm microtubule-associated pro...	31	1.1
19	PUR2_RHOBA (Q7UPZ8) Phosphoribosylamine--glycine ligase (EC 6.3....	31	1.4
20	FBX39_BOVIN (Q32LM4) F-box only protein 39	31	1.4
21	PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)	30	1.8
22	FBX2_HUMAN (Q9UK22) F-box only protein 2	30	1.8
23	ARK72_RAT (Q8CG45) Aflatoxin B1 aldehyde reductase member 2 (EC ...	30	1.8
24	GAF1_SCHPO (Q10280) Transcription factor gaf1 (Gaf-1)	30	1.8
25	JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation...	30	1.8
26	ATU_DROME (Q94546) Another transcription unit protein	30	1.8
27	MDC1_MOUSE (Q5PSV9) Mediator of DNA damage checkpoint protein 1	30	2.4
28	CAT8_YEAST (P39113) Regulatory protein CAT8	30	2.4
29	ACON2_ECOLI (P36683) Aconitate hydratase 2 (EC 4.2.1.3) (Citrate...	30	2.4
30	HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)	30	2.4
31	DLT_DROME (Q8T626) Protein disks lost (Protein vanaso) (Codanin ...	30	3.1
32	GRR1_YEAST (P24814) Ubiquitin ligase complex F-box protein GRR1	30	3.1
33	FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leuci...	30	3.1
34	SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2	30	3.1
35	YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7	30	3.1
36	KPC1_ASPNG (Q00078) Protein kinase C-like (EC 2.7.11.13)	30	3.1
37	COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Co...	30	3.1
38	WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family mem...	26	3.2
39	RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)	29	4.0
40	MED3_YEAST (P40356) RNA polymerase II mediator complex subunit 3...	29	4.0
41	RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)	29	4.0
42	JHD1B_HUMAN (Q8NHM5) JmjC domain-containing histone demethylatio...	29	4.0
43	EL5_ORYSA (Q9LRB7) E3 ubiquitin ligase EL5 (EC 6.3.2.-)	29	4.0
44	VE2_HPV12 (P36782) Regulatory protein E2	29	4.0
45	TOM40_MOUSE (Q9QYA2) Probable mitochondrial import receptor subu...	29	4.0
46	TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subuni...	29	4.0
47	UN13D_HUMAN (Q70J99) Unc-13 homolog D (Munc13-4)	29	4.0
48	VE2_HPV5B (P26545) Regulatory protein E2	29	4.0
49	VE2_HPV05 (P06921) Regulatory protein E2	29	4.0
50	HNRPL_MOUSE (Q8R081) Heterogeneous nuclear ribonucleoprotein L (...	29	4.0
51	WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family mem...	26	4.0
52	WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W...	25	4.1
53	VASP_BOVIN (Q2TA49) Vasodilator-stimulated phosphoprotein (VASP)	29	5.3
54	TSYL1_HUMAN (Q9H0U9) Testis-specific Y-encoded-like protein 1 (T...	29	5.3
55	OTSB_ECOLI (P31678) Trehalose-phosphatase (EC 3.1.3.12) (Trehalo...	29	5.3
56	FBX39_HUMAN (Q8N4B4) F-box only protein 39	29	5.3
57	XKDO_BACSU (P54334) Phage-like element PBSX protein xkdO	29	5.3
58	VKGC_MOUSE (Q9QYC7) Vitamin K-dependent gamma-carboxylase (EC 6....	28	6.9
59	RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)	28	6.9
60	MATK_DIAEN (Q6LA20) Maturase K (Intron maturase)	28	6.9
61	FMN2_MOUSE (Q9JL04) Formin-2	28	6.9
62	FMN_CHICK (Q05858) Formin (Limb deformity protein)	28	6.9
63	VKGC_RAT (O88496) Vitamin K-dependent gamma-carboxylase (EC 6.4....	28	6.9
64	COT2_MOUSE (P43135) COUP transcription factor 2 (COUP-TF2) (COUP...	28	6.9
65	COT2_HUMAN (P24468) COUP transcription factor 2 (COUP-TF2) (COUP...	28	6.9
66	COT2_BOVIN (Q9TTR7) COUP transcription factor 2 (COUP-TF2) (COUP...	28	6.9
67	CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor	28	6.9
68	ARR4_ARATH (O82798) Two-component response regulator ARR4 (Respo...	28	6.9
69	WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)	25	8.7
70	IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)	28	9.0
71	PACC_ASPFU (Q4WY67) pH-response transcription factor pacC/RIM101	28	9.0
72	COMT_HUMAN (P21964) Catechol O-methyltransferase (EC 2.1.1.6)	28	9.0
73	RSP5_CAEEL (Q10021) Probable splicing factor, arginine/serine-ri...	28	9.0
74	VE2_HPV36 (P50809) Regulatory protein E2	28	9.0
75	VID21_CRYNE (Q5KL22) Chromatin modification-related protein VID21	28	9.0
76	VID21_ASHGO (Q756L0) Chromatin modification-related protein VID21	28	9.0
77	TOM40_HUMAN (O96008) Probable mitochondrial import receptor subu...	28	9.0
78	KLF14_HUMAN (Q8TD94) Krueppel-like factor 14 (Transcription fact...	28	9.0
79	PIN4_ORYSA (Q6ZIB5) Probable auxin efflux carrier component 4 (O...	28	9.0
80	MTG8_HUMAN (Q06455) Protein CBFA2T1 (Protein MTG8) (Protein ETO)...	28	9.0
81	FXL17_HUMAN (Q9UF56) F-box/LRR-repeat protein 17 (F-box and leuc...	28	9.0
82	WWP2_HUMAN (O00308) NEDD4-like E3 ubiquitin-protein ligase WWP2 ...	28	9.0
83	GLI2_HUMAN (P10070) Zinc finger protein GLI2 (Tax helper protein)	28	9.0
84	ENV_MLVHO (P21436) Env polyprotein precursor [Contains: Coat pro...	28	9.0

>FXL17_MOUSE (Q9QZN1) F-box/LRR-repeat protein 17 (F-box and leucine-rich repeat|
           protein 17) (F-box only protein 13) (Fragment)
          Length = 462

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 37/137 (27%), Positives = 54/137 (39%)
 Frame = +1

Query: 10  QRLPESPSQIGMASPPPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGE 189
           Q  PE+P       PPP  PD   LP   LL +F  L   E  + A +VC+ W R    +
Sbjct: 62  QEPPENPCDCHR-EPPPEIPDINQLPPSILLKIFSNLSLNERCLSASLVCKYW-RDLCLD 119

Query: 190 PDLWRRVDLSDCFDPTIDXXXXXXXXXXXXDGRLEHFAADCFVTDALLFYMAKRTNGLKS 369
              W+++DLS                                VTD LL  +A R+  +  
Sbjct: 120 FQFWKQLDLSSRQQ----------------------------VTDELLEKIASRSQNIIE 151

Query: 370 LRLVNCMKVSDKGLVAL 420
           + + +C  +SD G+  L
Sbjct: 152 INISDCRSLSDSGVCVL 168



 Score = 29.3 bits (64), Expect = 4.0
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 316 VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGK 426
           +TD  L  +  R   LK +    C K+SD+G++ + K
Sbjct: 212 LTDEGLKQLGSRCRELKDIHFGQCYKISDEGMIVIAK 248

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>SKP2_HUMAN (Q13309) S-phase kinase-associated protein 2 (F-box protein Skp2)|
           (Cyclin A/CDK2-associated protein p45) (p45skp2)
           (F-box/LRR-repeat protein 1)
          Length = 424

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +1

Query: 73  WAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLS 219
           W  LPD+ LL +F  L  PE+L  +G VC+ W R+A+ E  LW+ +DL+
Sbjct: 97  WDSLPDELLLGIFSCLCLPELLKVSG-VCKRWYRLASDE-SLWQTLDLT 143

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>SKP2_MOUSE (Q9Z0Z3) S-phase kinase-associated protein 2 (F-box protein Skp2)|
           (Cyclin A/CDK2-associated protein p45) (F-box/WD-40
           protein 1) (FWD1)
          Length = 424

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 21/49 (42%), Positives = 31/49 (63%)
 Frame = +1

Query: 73  WAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLS 219
           W  LPD+ LL +F  L  PE+L  +G VC+ W R++  E  LW+ +DL+
Sbjct: 97  WDSLPDELLLGIFSCLCLPELLRVSG-VCKRWYRLSLDE-SLWQSLDLA 143

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>MAF_MOUSE (P54843) Transcription factor Maf (Proto-oncogene c-maf)|
          Length = 370

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = -3

Query: 155 TTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGGDAMPIWLGLSGSL 12
           T  AP +  GA    N    A  G PA +GG GGGD      G  G+L
Sbjct: 196 TAGAPGTAGGASSSSNGAGGAGGGGPANTGGGGGGDGGGGTAGAGGAL 243

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>FBX6_MOUSE (Q9QZN4) F-box only protein 6 (F-box only protein 6b)|
          Length = 295

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +1

Query: 82  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCF 228
           LP++ LL +F  + AP++L    +VCR W R       LW+R  L + F
Sbjct: 7   LPENILLELFIHIPAPQLLRNCRLVCRLW-RDLIDVVSLWKRKSLREGF 54

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>FBXL3_MOUSE (Q8C4V4) F-box/LRR-repeat protein 3 (F-box/LRR-repeat protein 3A)|
           (F-box and leucine-rich repeat protein 3A)
          Length = 428

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 23/61 (37%), Positives = 27/61 (44%)
 Frame = +1

Query: 22  ESPSQIGMASPPPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLW 201
           E P +         P DW  L  D +L VF  L   +    A  VCRNW +V    PDLW
Sbjct: 19  EKPKRPRTTQERSQPCDWGNLLQDIVLHVFKYLPLLD-RAHASQVCRNWNQV-FHMPDLW 76

Query: 202 R 204
           R
Sbjct: 77  R 77

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>FBXW5_HUMAN (Q969U6) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein|
           5)
          Length = 566

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 19/41 (46%), Positives = 24/41 (58%)
 Frame = +1

Query: 82  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204
           LPD  +  +F  LG  +VL  AG+VCR W  V+  E  LWR
Sbjct: 9   LPDSLVYQIFLSLGPADVL-AAGLVCRQWQAVSRDE-FLWR 47

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>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 precursor|
          Length = 317

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = -3

Query: 329 SASVTKQSAAKCSRRPXXXXXXXXXXXXXXMVGSKQSDRSTRRHRSGSPVATRSQLRQTT 150
           S+S +K S++  S                    S +S  S    +S S  ++ S +  TT
Sbjct: 172 SSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTT 231

Query: 149 PAPMSTSGA 123
           PA  S+SGA
Sbjct: 232 PASSSSSGA 240

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>FXL14_HUMAN (Q8N1E6) F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat|
           protein 14)
          Length = 418

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +1

Query: 280 DGRLEHFAADCFVTDALLFYMAKRTNGLKSLRLVNCMKVSDKGL 411
           DG        C ++D  +  M ++ +GL++L +  C++++DKGL
Sbjct: 305 DGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGL 348

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>FBXW5_MOUSE (Q9QXW2) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein|
           5)
          Length = 573

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +1

Query: 82  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204
           LPD  +  +F  LG  +VL  AG+VCR W  V+  E  LW+
Sbjct: 9   LPDSLVYQIFLSLGPADVL-AAGLVCRQWQAVSRDE-FLWK 47

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>FXL14_MOUSE (Q8BID8) F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat|
           protein 14)
          Length = 400

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +1

Query: 280 DGRLEHFAADCFVTDALLFYMAKRTNGLKSLRLVNCMKVSDKGL 411
           DG        C ++D  +  M ++ +GL++L +  C++++DKGL
Sbjct: 305 DGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGL 348

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>FBXL3_HUMAN (Q9UKT7) F-box/LRR-repeat protein 3 (F-box/LRR-repeat protein 3A)|
           (F-box and leucine-rich repeat protein 3A)
          Length = 428

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 20/45 (44%), Positives = 23/45 (51%)
 Frame = +1

Query: 70  DWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204
           DW  L  D +L VF  L   +    A  VCRNW +V    PDLWR
Sbjct: 35  DWGNLLQDIILQVFKYLPLLD-RAHASQVCRNWNQV-FHMPDLWR 77

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>FBX6_RAT (Q923V4) F-box only protein 6 (F-box only protein 6b)|
           (F-box/G-domain protein 2)
          Length = 284

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +1

Query: 82  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCF 228
           LP++ LL +F  + AP++L    +VC  W R       LW+R  L + F
Sbjct: 7   LPENILLELFTHVPAPQLLRNCRLVCSLW-RDLIDVMTLWKRKSLREGF 54

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>FBX39_RAT (Q66H10) F-box only protein 39|
          Length = 443

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = +1

Query: 55  PPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204
           P     WA LPD  L  VF  LG  +    A +VCR W ++     DLWR
Sbjct: 10  PQDQSCWATLPDVCLRRVFWWLGDRD-RSRAALVCRKWNQIMY-SADLWR 57

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>FBX2_MOUSE (Q80UW2) F-box only protein 2|
          Length = 297

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 76  AGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLW 201
           A LP+  LL V   L A E++    +VC  W  +  G P LW
Sbjct: 52  AELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAP-LW 92

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>FBX39_MOUSE (Q5NBU5) F-box only protein 39|
          Length = 443

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = +1

Query: 73  WAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204
           WA LPD  L  VF  LG  +    A +VCR W ++     DLWR
Sbjct: 16  WATLPDVCLRRVFWWLGDRD-RSRAALVCRKWNQIMY-SADLWR 57

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>ASF1_HELAN (P22357) Anther-specific protein SF18 precursor (Fragment)|
          Length = 161

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -3

Query: 149 PAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGGDAMP 39
           PAP +  G+P  P        G P  +GGDGGG A P
Sbjct: 113 PAPPAGGGSP--PPAGGDGGGGAPPPAGGDGGGGAPP 147



 Score = 28.9 bits (63), Expect = 5.3
 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = -3

Query: 152 TPAPMSTSGA--PRRPNTVRRASSGRPAQSGGDGGGDAMP 39
           TP+P    G   P  P     A  G P  +GGDGGG A P
Sbjct: 101 TPSPPGGDGGSGPAPP-----AGGGSPPPAGGDGGGGAPP 135

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>EMAP_STRPU (Q26613) 77 kDa echinoderm microtubule-associated protein|
          Length = 686

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
 Frame = -3

Query: 161 RQTTPAPMSTSGAPRRPNTVRRASSGRPAQS-------GGDGGG 51
           R +T  P S S  PRRPNT  R SS RP          GG  GG
Sbjct: 4   RPSTARPNSAS--PRRPNTPGRPSSARPGSGRTRASPRGGSAGG 45

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>PUR2_RHOBA (Q7UPZ8) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)|
           (Glycinamide ribonucleotide synthetase)
           (Phosphoribosylglycinamide synthetase)
          Length = 437

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +1

Query: 31  SQIGMASPPPSPPDWAGLPD---DALLTVFGRLGAPEVLMGAGVVCRNWLRVA 180
           + +G+    P  P  AGL D   DA L  FG   A   L G+ V C+N LR A
Sbjct: 64  NNVGLVIVGPEAPLVAGLVDALTDAGLRAFGPSKAASELEGSKVFCKNLLRSA 116

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>FBX39_BOVIN (Q32LM4) F-box only protein 39|
          Length = 443

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = +1

Query: 55  PPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204
           P     WA LPD  L  VF  LG  +    A +VCR W ++     DLWR
Sbjct: 10  PQDQSCWATLPDVCLRRVFWWLGDRD-RSRAALVCRKWNQMMY-SADLWR 57

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>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)|
          Length = 5120

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
 Frame = -3

Query: 425 LPRATKPLSETFMQLTSRRLFKPLVLLAM*KSSASVTKQSAAKCSRRPXXXXXXXXXXXX 246
           +P  TKP ++T      +   KPL  ++  KS   +  QS AK                 
Sbjct: 573 MPETTKPPADTH-PAGDKPDSKPLPQVSRQKSDPKLASQSGAK----------------- 614

Query: 245 XXMVGSKQSDRSTRRHRSGSPVATRSQLRQTTPAPM-STSGAPRRP--NTVRRASSGRPA 75
                   SD  T++    +PV    +  QT PAP   T  AP+ P   T  R +S +PA
Sbjct: 615 --------SDAKTQKPSEPAPVKDDPKKLQTKPAPKPDTKPAPKGPQAGTGPRPTSAQPA 666

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>FBX2_HUMAN (Q9UK22) F-box only protein 2|
          Length = 296

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 82  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLW 201
           LP+  LL V   L A E++    +VC  W  +  G P LW
Sbjct: 50  LPEPLLLRVLAALPAAELVQACRLVCLRWKELVDGAP-LW 88

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>ARK72_RAT (Q8CG45) Aflatoxin B1 aldehyde reductase member 2 (EC 1.-.-.-)|
           (rAFAR2)
          Length = 367

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = -3

Query: 197 RSGSPVATRSQLRQTTPAPMSTSGAPRRPNTV 102
           RSG  VA R      +PAP + SGAP RP TV
Sbjct: 19  RSGPSVA-RPLAMSRSPAPRAVSGAPLRPGTV 49

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>GAF1_SCHPO (Q10280) Transcription factor gaf1 (Gaf-1)|
          Length = 855

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 19/42 (45%), Positives = 21/42 (50%)
 Frame = -3

Query: 170 SQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGGDA 45
           S L  + P P S S  PRRPNT R  SS    Q  G  G D+
Sbjct: 403 SSLPISAPVPNSNSQFPRRPNTFRTNSSKSVGQ--GSSGVDS 442

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>JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation protein 1 (EC|
            1.14.11.-)
          Length = 1345

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
 Frame = +1

Query: 88   DDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCFDPTIDXXXXXXXX 267
            D  +L +  R    + L+    VC+ W   A  +PDLW++++ S       +        
Sbjct: 1066 DPTVLKIIFRYLPQDTLVTCCSVCKVWSNAAV-DPDLWKKMNCS-------EHKMSASLL 1117

Query: 268  XXXXDGRLEHFAAD-CFVTDALLFYMAKRTNGLKSLRLVNC 387
                  + EH   D   +    L ++  R   LK+L L NC
Sbjct: 1118 TAIVRRQPEHLILDWTQIAKRQLAWLVARLPALKNLSLQNC 1158

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>ATU_DROME (Q94546) Another transcription unit protein|
          Length = 725

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
 Frame = -3

Query: 329 SASVTKQ--SAAKCSRRPXXXXXXXXXXXXXXMVGSKQSDRSTRRHRSGSPVATRSQLRQ 156
           S SVT Q  SA    R                   S+    S R  RSGS  +  SQL  
Sbjct: 20  SRSVTPQGGSAPGSQRSRRSGSGSDRSRSGSRSSRSRSGSGSPRSARSGSAESRHSQLSG 79

Query: 155 TTPAPMSTSGAPRRPNTVRRASSGRP 78
           +  +  S S   RR  + R   SG P
Sbjct: 80  SARSKRSRSAHSRRSGSARSRKSGTP 105

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>MDC1_MOUSE (Q5PSV9) Mediator of DNA damage checkpoint protein 1|
          Length = 1707

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -3

Query: 215  RSTRRHRSGSPVATRSQLRQTTPA--PMSTSGAPRRPNTVRRASSGRPAQS 69
            R+TR   S S + T   +  T P   P++++  P  PN   RAS GR ++S
Sbjct: 1199 RATRGRPSKSSIKTPESVVPTGPELQPLTSAKQPVTPNLTSRASRGRSSKS 1249

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>CAT8_YEAST (P39113) Regulatory protein CAT8|
          Length = 1433

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = -3

Query: 230  SKQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGG 51
            S+++ +S   ++  +P +T  Q+R+T+  P ++   PRRP   R  +    +  GG    
Sbjct: 1362 SQENSKSATGNQLDTP-STLFQMRRTSSGPSASHRGPRRPQKNRYNTDRSKSSGGGSSNT 1420

Query: 50   D 48
            D
Sbjct: 1421 D 1421

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>ACON2_ECOLI (P36683) Aconitate hydratase 2 (EC 4.2.1.3) (Citrate hydro-lyase 2)|
           (Aconitase 2)
          Length = 865

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +1

Query: 28  PSQIGMASPPPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATG 186
           P+++ +A  PP+  D A L ++   +VFG+ GA   + G  +   N  RVA G
Sbjct: 732 PTRLWVA--PPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADG 782

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>HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)|
          Length = 288

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 7/39 (17%)
 Frame = -3

Query: 134 TSGAPRRPNTVRRASS-------GRPAQSGGDGGGDAMP 39
           T+G PRRP    R S        G P   GG GGG   P
Sbjct: 70  TAGEPRRPGAESRRSPAAAAPAPGAPVPGGGGGGGGGSP 108

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>DLT_DROME (Q8T626) Protein disks lost (Protein vanaso) (Codanin 1 homolog)|
          Length = 1240

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 22/67 (32%), Positives = 31/67 (46%)
 Frame = -3

Query: 227 KQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGGD 48
           +Q + S+   RS   +++ S    TTPAP    G    P +  +  S  P +SGG G G 
Sbjct: 108 QQLNESSILSRSSCSMSSTSN---TTPAPQQPQGRRSTPGSGAQFCS-TPNRSGGGGAGG 163

Query: 47  AMPIWLG 27
              I LG
Sbjct: 164 GHSICLG 170

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>GRR1_YEAST (P24814) Ubiquitin ligase complex F-box protein GRR1|
          Length = 1151

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +1

Query: 316 VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVAL 420
           +TDA LF ++K    L+++   +C  ++D G+ AL
Sbjct: 612 ITDASLFQLSKLGKNLQTVHFGHCFNITDNGVRAL 646

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>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat|
           protein 7) (F-box protein FBL6/FBL7)
          Length = 491

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +1

Query: 316 VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVAL 420
           +TD  + Y+AK    LKSL +  C  VSD GL  L
Sbjct: 389 ITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLECL 423

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>SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2|
          Length = 306

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = -3

Query: 212 STRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSG--RPAQSGGDG 57
           S R  RS S  A  ++    T   ++ + APRRP   RR  +G  RP +  G G
Sbjct: 194 SARTGRSTSSCARAARAPSATEGALTRTPAPRRPLQRRRPGTGPWRPGRQRGAG 247

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>YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7|
          Length = 466

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 310 CF-VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGK 426
           CF +TD  +  +A     L+ L + NC ++SD+ LV+LG+
Sbjct: 263 CFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQ 302

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>KPC1_ASPNG (Q00078) Protein kinase C-like (EC 2.7.11.13)|
          Length = 1096

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 140 MSTSGAPRRPNTVRRASSGRPAQSGGDGGGDAMPIWLGLSGS 15
           M   GAP RP+T   A S  P+  GG G   +     G +G+
Sbjct: 360 MEHGGAPGRPDTAGGAGSAHPSGPGGPGAAPSQGYGDGSAGA 401

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>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:|
           Endostatin]
          Length = 1516

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
 Frame = -3

Query: 188 SPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDG-GGDAMP 39
           SP+       QT P P    G P R  T  R   G P   G DG  GD  P
Sbjct: 553 SPLGPAGPALQTVPGPQGPPGPPGRDGTPGR--DGEPGDPGEDGKPGDTGP 601

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>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
           (Verprolin homology domain-containing protein 2)
          Length = 498

 Score = 26.2 bits (56), Expect(2) = 3.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 49  SPPPSPPDWAGLPDDALLTVFGRLGAP 129
           +PPP PP   G+P       FG  G P
Sbjct: 321 APPPPPPPMIGIPPPPPPVGFGSPGTP 347



 Score = 21.9 bits (45), Expect(2) = 3.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 19  PESPSQIGMASPPPSPP 69
           P+  S +  + PPP+PP
Sbjct: 289 PKRSSVVSPSHPPPAPP 305

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>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 573

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 227 KQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTV 102
           +++ R  RR R+G PV     +  +TP P     APR+P  V
Sbjct: 502 ERAPRKRRRRRNGRPVEGAEPVVASTPVP--APAAPRKPTQV 541

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>MED3_YEAST (P40356) RNA polymerase II mediator complex subunit 3|
           (Poly-glutamine domain protein 1) (Hyper-recombination
           suppressor protein 1)
          Length = 397

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 206 RRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQS 69
           R  +SGS + T +    T  AP++    PR+P   ++A +   AQ+
Sbjct: 185 RGPKSGSTMGTPTVHNSTAAAPIAAPKKPRKPRQTKKAKAQAQAQA 230

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>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 571

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 230 SKQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTV 102
           ++++ R  RR R+G PV        +TP P     APR+P  V
Sbjct: 499 AERAPRKRRRRRNGRPVEGAEPALASTPVP--APAAPRKPTQV 539

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>JHD1B_HUMAN (Q8NHM5) JmjC domain-containing histone demethylation protein 1B (EC|
            1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
            leucine-rich repeat protein 10) (F-box protein FBL10)
            (Protein JEMMA) (Jumonji containing domain
            EMSY-interactor methyltr
          Length = 1336

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
 Frame = +1

Query: 52   PPP--SPPDWAGLPDDAL--------LTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLW 201
            PPP   PPD   L D A         + VF  L   ++ +   V CR W R    +  LW
Sbjct: 1045 PPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRV-CRTWNRWCC-DKRLW 1102

Query: 202  RRVDLSDC 225
             R+DL+ C
Sbjct: 1103 TRIDLNHC 1110

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>EL5_ORYSA (Q9LRB7) E3 ubiquitin ligase EL5 (EC 6.3.2.-)|
          Length = 325

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = -3

Query: 161 RQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGG 51
           R+      STSG  RRP   RR+ SG     GG GGG
Sbjct: 65  RRRAVTTTSTSGRGRRPRPRRRSGSG---GDGGTGGG 98

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>VE2_HPV12 (P36782) Regulatory protein E2|
          Length = 494

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = -3

Query: 224 QSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGG 54
           Q  RS  R+RS S   +RSQ +       S S + R P+  +  +    +QS G GG
Sbjct: 258 QQRRSRSRYRSQSNSRSRSQSQTRALGATSVSRSSRSPSVTQIRNRRSRSQSRGRGG 314

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>TOM40_MOUSE (Q9QYA2) Probable mitochondrial import receptor subunit TOM40|
          homolog (Translocase of outer membrane 40 kDa subunit
          homolog)
          Length = 359

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 19 PESPSQIGMASPPPSPP 69
          P +PS +G+  PPPSPP
Sbjct: 16 PPTPSLVGLPPPPPSPP 32

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>TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subunit TOM40|
          homolog (Translocase of outer membrane 40 kDa subunit
          homolog) (38 kDa mitochondrial outer membrane protein)
          (OM38)
          Length = 361

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 19 PESPSQIGMASPPPSPP 69
          P +PS +G+  PPPSPP
Sbjct: 17 PPTPSLVGLPPPPPSPP 33

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>UN13D_HUMAN (Q70J99) Unc-13 homolog D (Munc13-4)|
          Length = 1090

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = +1

Query: 16  LPESPSQIGMASPPPS----PPDWAGLPDDALLTVFGRLGAPE 132
           L + P Q+     PPS    P   A L +DAL TV  RLG PE
Sbjct: 29  LQDPPPQMAPEIQPPSHHFSPEQRALLYEDALYTVLHRLGHPE 71

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>VE2_HPV5B (P26545) Regulatory protein E2|
          Length = 514

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = -3

Query: 224 QSDRSTRRHRSGSPVATRSQLRQ----TTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDG 57
           Q  RS  RHRS S   +RS+ +     +T    STS    R  T R  S GR   +   G
Sbjct: 264 QQRRSRSRHRSRSRSRSRSKSQTHTTWSTTRSRSTSVGKTRALTSRSRSRGRSPSTCRRG 323

Query: 56  GG 51
           GG
Sbjct: 324 GG 325

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>VE2_HPV05 (P06921) Regulatory protein E2|
          Length = 514

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = -3

Query: 224 QSDRSTRRHRSGSPVATRSQLR----QTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDG 57
           Q  RS  RHRS S   +RS+ +    ++T    STS    R  T R  S GR   +   G
Sbjct: 264 QQRRSRSRHRSRSRSRSRSKSQTHTTRSTTRSRSTSLTKTRALTSRSRSRGRSPTTCRRG 323

Query: 56  GG 51
           GG
Sbjct: 324 GG 325

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>HNRPL_MOUSE (Q8R081) Heterogeneous nuclear ribonucleoprotein L (hnRNP L)|
          Length = 555

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 34  QIGMASPPPSPPDWAGLPDDALLTVFG 114
           Q G   PPP PPD+    D  +L V+G
Sbjct: 328 QYGHPPPPPPPPDYGPHADSPVLMVYG 354

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>WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family member 4|
           (WASP-family protein member 4)
          Length = 625

 Score = 25.8 bits (55), Expect(2) = 4.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 49  SPPPSPPDWAGLPDDALLTVFGRLGAP 129
           +PPP PP   G+P       FG  G P
Sbjct: 449 APPPPPPPMIGIPPPPPPIGFGSPGTP 475



 Score = 21.9 bits (45), Expect(2) = 4.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 19  PESPSQIGMASPPPSPP 69
           P+  S +  + PPP+PP
Sbjct: 417 PKRSSVVSPSHPPPAPP 433

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>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 24.6 bits (52), Expect(2) = 4.1
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 52  PPPSPPDWAGLPDD 93
           PPP PP   GLP D
Sbjct: 381 PPPGPPPPPGLPSD 394



 Score = 23.1 bits (48), Expect(2) = 4.1
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 16  LPESPSQIGMASPPPSPP 69
           LP  PS      PPP PP
Sbjct: 347 LPALPSSAPSGPPPPPPP 364

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>VASP_BOVIN (Q2TA49) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 382

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = -3

Query: 230 SKQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGG 51
           S+  +R  R   +G P A  +      P P    G P  P     +SSG  A + G GGG
Sbjct: 149 SELMERERRASNAGGPPAASAGAPPPPPGPPPPPGPPPPPGL---SSSGVSAATQGAGGG 205

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>TSYL1_HUMAN (Q9H0U9) Testis-specific Y-encoded-like protein 1 (TSPY-like 1)|
          Length = 438

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 43  MASPPPSPPDWAGLPDDALLTVFGRLGAPEVLMGAG 150
           +A PPP P +  G+P DA     GR G P++ +  G
Sbjct: 57  VALPPPPPSEEGGVPQDAA----GRGGTPQIRVVGG 88

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>OTSB_ECOLI (P31678) Trehalose-phosphatase (EC 3.1.3.12) (Trehalose 6-phosphate|
           phosphatase) (TPP)
          Length = 266

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +1

Query: 82  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDL 216
           L D++   V  RLG   V +G G    +W R+A G PD+W  +++
Sbjct: 200 LTDESGFAVVNRLGGMSVKIGTGATQASW-RLA-GVPDVWSWLEM 242

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>FBX39_HUMAN (Q8N4B4) F-box only protein 39|
          Length = 442

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +1

Query: 55  PPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204
           P     WA LPD  L  VF  LG  +    A +VCR W ++     +LWR
Sbjct: 10  PQDQSCWAFLPDLCLCRVFWWLGDRD-RSRAALVCRKWNQMMY-SAELWR 57

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>XKDO_BACSU (P54334) Phage-like element PBSX protein xkdO|
          Length = 1332

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = -3

Query: 176 TRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGGDAMPIWLG 27
           T  + +  T AP  T   P     +RR  SG PA+S     G  +  WLG
Sbjct: 328 TYRKKKSPTKAPNRTLKVPGE--VIRRRQSGTPAESAPRTSGSKLKNWLG 375

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>VKGC_MOUSE (Q9QYC7) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)|
           (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl
           carboxylase)
          Length = 757

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 308 IVSSPMRCSSTWPRELMA 361
           + SSP+ CS+ WPR+L+A
Sbjct: 304 LASSPLFCSAEWPRKLVA 321

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>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 574

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
 Frame = -3

Query: 230 SKQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTV-------RRASSGRPAQ 72
           ++++ R  RR R+G PV        +T  P++   APR+P  V          SSG P+ 
Sbjct: 502 AERAPRKRRRRRNGRPVEGAEPAVAST--PIAAPAAPRKPTQVVATPVRAANKSSGSPSL 559

Query: 71  SGGDG 57
            G  G
Sbjct: 560 LGRIG 564

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>MATK_DIAEN (Q6LA20) Maturase K (Intron maturase)|
          Length = 522

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 55  PPSPPDWAGLPDDALLTVFGRL 120
           P S P WA LPD  +L  FGR+
Sbjct: 403 PISKPIWADLPDSDILDQFGRI 424

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>FMN2_MOUSE (Q9JL04) Formin-2|
          Length = 1567

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 16   LPESPSQIGMASPPPSPPDWAGLPDDALLTVFGRLGAPEVLMGAG 150
            +P  P+  G+A PPP P    G+P  A       +  P +L G+G
Sbjct: 1042 IPPPPALPGVAIPPPPPLPGMGVPPPAPPPPGAGIPPPPLLPGSG 1086

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>FMN_CHICK (Q05858) Formin (Limb deformity protein)|
          Length = 1213

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
 Frame = +1

Query: 19  PESPSQIGMASPPPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRV------A 180
           P  P   G   PPP PP   GL  ++ L+       P +     +    W R+       
Sbjct: 732 PVPPPLPGSGLPPPPPPPGPGLFFNSTLSSSQGPRKPAIEPSRPMKPLYWTRIQLQGSRK 791

Query: 181 TGEPDLWRRVDLSDCFDPT 237
           T  P LW  ++  D  D T
Sbjct: 792 TAIPTLWESLEEPDILDTT 810

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>VKGC_RAT (O88496) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)|
           (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl
           carboxylase)
          Length = 758

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 308 IVSSPMRCSSTWPRELMA 361
           + SSP+ CS+ WPR+L+A
Sbjct: 304 LASSPLFCSAEWPRKLVA 321

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>COT2_MOUSE (P43135) COUP transcription factor 2 (COUP-TF2) (COUP-TF II)|
           (Apolipoprotein AI regulatory protein 1) (ARP-1)
          Length = 414

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = -3

Query: 185 PVATRSQLRQTTPAPMSTSGAPRRPNTVRRAS-SGRPAQ--SGGDGG 54
           P +  SQ  Q  P P    GAP  P T  +   +  PAQ  +GG GG
Sbjct: 16  PGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGG 62

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>COT2_HUMAN (P24468) COUP transcription factor 2 (COUP-TF2) (COUP-TF II)|
           (Apolipoprotein AI regulatory protein 1) (ARP-1)
          Length = 414

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = -3

Query: 185 PVATRSQLRQTTPAPMSTSGAPRRPNTVRRAS-SGRPAQ--SGGDGG 54
           P +  SQ  Q  P P    GAP  P T  +   +  PAQ  +GG GG
Sbjct: 16  PGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGG 62

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>COT2_BOVIN (Q9TTR7) COUP transcription factor 2 (COUP-TF2) (COUP-TF II)|
          Length = 414

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = -3

Query: 185 PVATRSQLRQTTPAPMSTSGAPRRPNTVRRAS-SGRPAQ--SGGDGG 54
           P +  SQ  Q  P P    GAP  P T  +   +  PAQ  +GG GG
Sbjct: 16  PGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGG 62

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>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor|
          Length = 1759

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = -3

Query: 203  RHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDG--GGDAMPIWL 30
            R  SG P       R   P P+   G    P    +   G P Q+G DG  G D +P   
Sbjct: 1235 RGESGQPGQPGLPGRDGQPGPVGPPGDDGYPGAPGQDIYGPPGQAGQDGYPGLDGLPGAP 1294

Query: 29   GLSG 18
            GL+G
Sbjct: 1295 GLNG 1298

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>ARR4_ARATH (O82798) Two-component response regulator ARR4 (Response regulator|
           1)
          Length = 259

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 10  QRLPESPSQIGMASPPPSPP 69
           ++LPE  S +  + PPPSPP
Sbjct: 173 RKLPEDSSSVNSSLPPPSPP 192

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>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 24.6 bits (52), Expect(2) = 8.7
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 52  PPPSPPDWAGLPDD 93
           PPP PP   GLP D
Sbjct: 377 PPPGPPPPPGLPSD 390



 Score = 21.9 bits (45), Expect(2) = 8.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 19  PESPSQIGMASPPPSPP 69
           P   S  G  +PPP PP
Sbjct: 358 PPPLSMAGSTAPPPPPP 374

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>IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)|
          Length = 1338

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -3

Query: 143 PMSTSGAPRRPNTVRRASSGRPAQSGGDGGGDAMPIWLGLSGSL 12
           P+S +G+P  P  VR   S     SGG GG  +    L   G+L
Sbjct: 382 PVSVAGSPLSPGPVRAPLSRSHTLSGGCGGRGSKVALLPAGGAL 425

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>PACC_ASPFU (Q4WY67) pH-response transcription factor pacC/RIM101|
          Length = 676

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 13/71 (18%)
 Frame = -3

Query: 230 SKQSDRSTRRHRSGSPVATR-------------SQLRQTTPAPMSTSGAPRRPNTVRRAS 90
           S+  D +T  + + SP AT              SQ   TTPAP+STS  P        A+
Sbjct: 2   SEHQDTATNNNTTASPSATAAPMPAPISQEQPSSQPAATTPAPVSTSTPPASVTATAAAA 61

Query: 89  SGRPAQSGGDG 57
           +   +    +G
Sbjct: 62  TAAVSAPQANG 72

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>COMT_HUMAN (P21964) Catechol O-methyltransferase (EC 2.1.1.6)|
          Length = 271

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 19/52 (36%), Positives = 22/52 (42%)
 Frame = +1

Query: 82  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCFDPT 237
           LPD  LL   G L    VL+   V+C        G PD    V  S CF+ T
Sbjct: 198 LPDTLLLEECGLLRKGTVLLADNVIC-------PGAPDFLAHVRGSSCFECT 242

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>RSP5_CAEEL (Q10021) Probable splicing factor, arginine/serine-rich 5|
           (RNA-binding protein srp-3) (CeSC35-2)
          Length = 208

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 15/72 (20%)
 Frame = -3

Query: 230 SKQSDRS-TRRHRSGSPVATRSQLRQTTPAPMSTSGAPRR-------------PNTVR-R 96
           S+  DR  +RR RS S   +RS +R++     S S +P+R             P   R R
Sbjct: 106 SRSRDRKRSRRSRSRSSSRSRSPVRESRRRSESRSPSPKRDLKREASRSRSPLPAKDRSR 165

Query: 95  ASSGRPAQSGGD 60
             SG P ++GGD
Sbjct: 166 TRSGSPPKNGGD 177

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>VE2_HPV36 (P50809) Regulatory protein E2|
          Length = 509

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = -3

Query: 215 RSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNT----VRRASSGRPAQSGGDGGG 51
           RS  RHRS S   +RSQ R  TP   S +   R P+     V+R S+   ++S    GG
Sbjct: 266 RSRSRHRS-SRSRSRSQSRSHTPTTRSATTRSRSPSLAKTGVQRVSTRSRSRSTSRRGG 323

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>VID21_CRYNE (Q5KL22) Chromatin modification-related protein VID21|
          Length = 985

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
 Frame = -3

Query: 179 ATRSQLRQTTPAPMSTSGAPRRPNTVRRAS-SGRPAQSGGDG-------GGDAMP 39
           AT+      TP P S    P  P +    S SGRP Q+GG+         G+A+P
Sbjct: 494 ATQPGTATATPVPQSAVTTPGVPPSANLPSASGRPQQTGGNSVSSLPTPTGEALP 548

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>VID21_ASHGO (Q756L0) Chromatin modification-related protein VID21|
          Length = 957

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 236 VGSKQSDRSTRRHRSGSPV-ATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQ 72
           VGS+   R  RR R  +   A R  +++   AP      PR+P  V+ A+   PA+
Sbjct: 677 VGSESIQRGHRRLRWATMFEAMRKTIKKRENAPRPNPSQPRKPLDVKSAAVPTPAE 732

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>TOM40_HUMAN (O96008) Probable mitochondrial import receptor subunit TOM40|
          homolog (Translocase of outer membrane 40 kDa subunit
          homolog) (Haymaker protein) (p38.5)
          Length = 361

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 19 PESPSQIGMASPPPSPP 69
          P +P+ +G+  PPPSPP
Sbjct: 17 PPAPALVGLPPPPPSPP 33

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>KLF14_HUMAN (Q8TD94) Krueppel-like factor 14 (Transcription factor BTEB5)|
           (Basic transcription element-binding protein 5)
           (BTE-binding protein 5)
          Length = 323

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = -3

Query: 146 APMSTSGAPRRPNTVRRASSGRPAQSGGDGGG 51
           AP S+S AP  P+    A+ G PA SGG  GG
Sbjct: 140 APESSSDAPAVPSAP--AAPGAPAASGGFSGG 169

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>PIN4_ORYSA (Q6ZIB5) Probable auxin efflux carrier component 4 (OsPIN4)|
          Length = 370

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 149 PAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGGDAMPIW 33
           PA MS+S  P + + V    +G    + G GGG  +P W
Sbjct: 174 PAVMSSSSPPEKQSDVEM--NGAVVAAPGGGGGVRLPFW 210

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>MTG8_HUMAN (Q06455) Protein CBFA2T1 (Protein MTG8) (Protein ETO) (Eigth twenty|
           one protein) (Cyclin D-related protein) (Zinc finger
           MYND domain-containing protein 2)
          Length = 604

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 9/58 (15%)
 Frame = -3

Query: 209 TRRHRS--GSPVATRSQLRQTTPA---PMSTSGAPR----RPNTVRRASSGRPAQSGG 63
           T +H +   SPV  ++Q R T P    P +T GAPR     P T+   +S  P    G
Sbjct: 32  TEKHSTMPDSPVDVKTQSRLTPPTMPPPPTTQGAPRTSSFTPTTLTNGTSHSPTALNG 89

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>FXL17_HUMAN (Q9UF56) F-box/LRR-repeat protein 17 (F-box and leucine-rich repeat|
           protein 17) (F-box only protein 13) (Fragment)
          Length = 370

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 316 VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGK 426
           +TD  L  +  +   LK +    C K+SD+G++ + K
Sbjct: 120 LTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIAK 156

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>WWP2_HUMAN (O00308) NEDD4-like E3 ubiquitin-protein ligase WWP2 (EC 6.3.2.-)|
           (WW domain-containing protein 2) (Atrophin-1-interacting
           protein 2) (AIP2)
          Length = 870

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
 Frame = +1

Query: 4   TTQRLPESPSQIGMASPPPSP------PDWAGLPDDA 96
           TT   PE PS +G+ SPP +P      P+   LP  A
Sbjct: 240 TTATDPEEPSVVGVTSPPAAPLSVTPNPNTTSLPAPA 276

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>GLI2_HUMAN (P10070) Zinc finger protein GLI2 (Tax helper protein)|
          Length = 1258

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 4    TTQRLPESP-SQIGMASPPPSPPDWAGLPDDALLTVFGRL 120
            T + +P+     +G   P P P D  G PD ++L  +G++
Sbjct: 1084 TAEAVPKGAMGNMGSVPPQPPPQDAGGAPDHSMLYYYGQI 1123

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>ENV_MLVHO (P21436) Env polyprotein precursor [Contains: Coat protein GP76;|
           Spike protein p15E]
          Length = 666

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 13  RLPESPSQIGMASPPPSPPDWAGLPDDALLTVFGRLGAP 129
           R+P  P+ +     PPS P+ A LP  + LT  G   AP
Sbjct: 262 RVPIGPNPVLSEQRPPSQPEPARLPPSSNLTQGGTPSAP 300


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,535,754
Number of Sequences: 219361
Number of extensions: 979968
Number of successful extensions: 6166
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 5189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6092
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result