ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast57a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466496.1| Oryza sativa (japonica cultivar-group), mRNA 121 2e-24
2dbj|AK107707.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
3gb|AY107714.1| Zea mays PCO121192 mRNA sequence 113 5e-22
4gb|AY596534.1| Saccharum officinarum clone SCJLLR1104A08, comple... 103 5e-19
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
6dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
7gb|AY581837.1| Cynodon dactylon unknown mRNA 54 4e-04
8gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
11ref|XM_467200.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.026
12ref|XM_467198.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.026
13ref|XM_473678.1| Oryza sativa (japonica cultivar-group), predic... 48 0.026
14dbj|AK111294.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
15dbj|AK071055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
16dbj|AK060089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
17ref|XM_464320.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.40
18dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 44 0.40
19dbj|AK072843.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
20gb|AE015451.1| Pseudomonas putida KT2440 complete genome 44 0.40
21ref|XM_473677.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
22gb|AY257214.1| Ipomoea alba chalcone synthase (CHS-D) mRNA, part... 42 1.6
23emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.6
24emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 42 1.6
25gb|AC159277.3| Mus musculus BAC clone RP23-356J2 from chromosome... 42 1.6
26gb|AF396669.1| Oryzias latipes choriogenin Hminor gene, partial cds 42 1.6
27dbj|AK070920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
28dbj|AK064763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
29ref|NM_124077.3| Arabidopsis thaliana unknown protein AT5G47060 ... 40 6.2
30gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 6.2
31ref|XM_469171.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
32ref|XM_467201.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
33ref|XM_515944.1| PREDICTED: Pan troglodytes similar to N2B-Titin... 40 6.2
34gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
35gb|AC116075.5| Rattus norvegicus 6 BAC CH230-139H23 (Children's ... 40 6.2
36ref|XM_366656.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 40 6.2
37gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
38ref|NM_133378.2| Homo sapiens titin (TTN), transcript variant N2... 40 6.2
39ref|NM_003319.2| Homo sapiens titin (TTN), transcript variant N2... 40 6.2
40ref|NM_133432.1| Homo sapiens titin (TTN), transcript variant no... 40 6.2
41ref|NM_133437.1| Homo sapiens titin (TTN), transcript variant no... 40 6.2
42gb|AF047974.1| Vibrio cholerae exbB-related protein, ExbB2 (exbB... 40 6.2
43gb|AY144497.1| Oryza sativa (japonica cultivar-group) OsCDPK pro... 40 6.2
44gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 6.2
45gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 6.2
46emb|X69490.1|HSTITIN H.sapiens mRNA for titin 40 6.2
47emb|X64697.1|HSTITINC3 H.sapiens mRNA titin (subclone C37) 40 6.2
48emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.2
49emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 40 6.2
50emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin 40 6.2
51gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.2
52gb|AC026689.6| Homo sapiens chromosome 5 clone CTB-55A14, comple... 40 6.2
53dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
54gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 6.2
55emb|BX833202.1|CNS09Z3Z Arabidopsis thaliana Full-length cDNA Co... 40 6.2
56emb|BX841728.1|CNS09YKE Arabidopsis thaliana Full-length cDNA Co... 40 6.2
57gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complet... 40 6.2
58gb|AC009948.3| Homo sapiens BAC clone RP11-65L3 from 2, complete... 40 6.2
59gb|AF267176.1|AF267176 Pyricularia grisea chromosome 7 clone BAC... 40 6.2
60dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
61dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.2
62dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
63dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
64dbj|AK102308.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
65emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 6.2
66dbj|AK066202.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
67gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.2
68gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.2
69emb|X92412.1|HSTITINX5 H.sapiens titin gene exon 5 40 6.2
70emb|X90568.1|HSTITIN2B H.sapiens mRNA for titin protein (clone h... 40 6.2
71emb|X52530.1|SPRRK1 S.pombe rrk1 gene for K-RNA (component of RN... 40 6.2 
>ref|XM_466496.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 721

 Score =  121 bits (61), Expect = 2e-24
 Identities = 115/133 (86%)
 Strand = Plus / Plus

                                                                       
Query: 105 tccttcttgcagcgctgcttgctgtgccacaaggatctagccgagaacaatgacatctac 164
           |||||||||||||||||||| || |||| || ||| || |||||   ||| |||||||||
Sbjct: 294 tccttcttgcagcgctgcttcctctgccgcagggagctcgccgacggcaaggacatctac 353

                                                                       
Query: 165 atgtacagaggtgacaaggcgttctgcagcgtcgagtgccggtgcaggcagatattcatc 224
           ||||||||||| ||||  |||||||||||||| || |||||||||| |||||| ||||| 
Sbjct: 354 atgtacagaggggacagagcgttctgcagcgtggattgccggtgcaagcagatcttcatg 413

                        
Query: 225 gacgaggacgccg 237
           |||||||||||||
Sbjct: 414 gacgaggacgccg 426



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 18  atcatcagcaaggccaccctccatagcc 45
           ||||||||||||||||||||||||||||
Sbjct: 210 atcatcagcaaggccaccctccatagcc 237
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>dbj|AK107707.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-D05, full
           insert sequence
          Length = 721

 Score =  121 bits (61), Expect = 2e-24
 Identities = 115/133 (86%)
 Strand = Plus / Plus

                                                                       
Query: 105 tccttcttgcagcgctgcttgctgtgccacaaggatctagccgagaacaatgacatctac 164
           |||||||||||||||||||| || |||| || ||| || |||||   ||| |||||||||
Sbjct: 294 tccttcttgcagcgctgcttcctctgccgcagggagctcgccgacggcaaggacatctac 353

                                                                       
Query: 165 atgtacagaggtgacaaggcgttctgcagcgtcgagtgccggtgcaggcagatattcatc 224
           ||||||||||| ||||  |||||||||||||| || |||||||||| |||||| ||||| 
Sbjct: 354 atgtacagaggggacagagcgttctgcagcgtggattgccggtgcaagcagatcttcatg 413

                        
Query: 225 gacgaggacgccg 237
           |||||||||||||
Sbjct: 414 gacgaggacgccg 426



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 18  atcatcagcaaggccaccctccatagcc 45
           ||||||||||||||||||||||||||||
Sbjct: 210 atcatcagcaaggccaccctccatagcc 237
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>gb|AY107714.1| Zea mays PCO121192 mRNA sequence
          Length = 742

 Score =  113 bits (57), Expect = 5e-22
 Identities = 117/137 (85%)
 Strand = Plus / Plus

                                                                       
Query: 100 cgggttccttcttgcagcgctgcttgctgtgccacaaggatctagccgagaacaatgaca 159
           |||| |||||| ||||||||||||  ||||||||||| || || ||||||  ||  ||||
Sbjct: 251 cgggctccttcctgcagcgctgctgcctgtgccacaaagagcttgccgagggcatggaca 310

                                                                       
Query: 160 tctacatgtacagaggtgacaaggcgttctgcagcgtcgagtgccggtgcaggcagatat 219
           |||||||||||| ||| |||  ||||||||||||||  |||||||||||| ||||||| |
Sbjct: 311 tctacatgtacaaaggcgaccgggcgttctgcagcgaggagtgccggtgccggcagatct 370

                            
Query: 220 tcatcgacgaggacgcc 236
           |||| ||||||||||||
Sbjct: 371 tcatggacgaggacgcc 387



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 16  agatcatcagcaaggccaccctc 38
           |||||||||||||||||||||||
Sbjct: 161 agatcatcagcaaggccaccctc 183
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>gb|AY596534.1| Saccharum officinarum clone SCJLLR1104A08, complete sequence
          Length = 1065

 Score =  103 bits (52), Expect = 5e-19
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                       
Query: 156 gacatctacatgtacagaggtgacaaggcgttctgcagcgtcgagtgccggtgcaggcag 215
           |||||||||||||||||||| |||  ||||||||||||||  |||||||||||| |||||
Sbjct: 364 gacatctacatgtacagaggcgaccgggcgttctgcagcgaggagtgccggtgccggcag 423

                                   
Query: 216 atattcatcgacgaggacgccggc 239
           || ||||| |||||||||||||||
Sbjct: 424 atcttcatggacgaggacgccggc 447
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                            
Query: 170      cagaggtgacaaggcgttctgcagcgtcgagtgccggtgcaggcagatattcatcgacga 229
                |||||| ||||  |||||||||||||| || |||||||||| |||||| ||||| |||||
Sbjct: 22962619 cagaggggacagagcgttctgcagcgtggattgccggtgcaagcagatcttcatggacga 22962560

                        
Query: 230      ggacgccg 237
                ||||||||
Sbjct: 22962559 ggacgccg 22962552



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 18       atcatcagcaaggccaccctccatagcc 45
                ||||||||||||||||||||||||||||
Sbjct: 22963005 atcatcagcaaggccaccctccatagcc 22962978



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                            
Query: 105      tccttcttgcagcgctgcttgctgtgccacaaggatctagccgagaacaatgacatctac 164
                |||||||||||||||||||| || |||| || ||| || |||||   ||| |||||||||
Sbjct: 22962921 tccttcttgcagcgctgcttcctctgccgcagggagctcgccgacggcaaggacatctac 22962862

                        
Query: 165      atgtacag 172
                ||||||||
Sbjct: 22962861 atgtacag 22962854
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>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0016G10
          Length = 143211

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 170   cagaggtgacaaggcgttctgcagcgtcgagtgccggtgcaggcagatattcatcgacga 229
             |||||| ||||  |||||||||||||| || |||||||||| |||||| ||||| |||||
Sbjct: 82421 cagaggggacagagcgttctgcagcgtggattgccggtgcaagcagatcttcatggacga 82362

                     
Query: 230   ggacgccg 237
             ||||||||
Sbjct: 82361 ggacgccg 82354



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 18    atcatcagcaaggccaccctccatagcc 45
             ||||||||||||||||||||||||||||
Sbjct: 82807 atcatcagcaaggccaccctccatagcc 82780



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 105   tccttcttgcagcgctgcttgctgtgccacaaggatctagccgagaacaatgacatctac 164
             |||||||||||||||||||| || |||| || ||| || |||||   ||| |||||||||
Sbjct: 82723 tccttcttgcagcgctgcttcctctgccgcagggagctcgccgacggcaaggacatctac 82664

                     
Query: 165   atgtacag 172
             ||||||||
Sbjct: 82663 atgtacag 82656
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>gb|AY581837.1| Cynodon dactylon unknown mRNA
          Length = 922

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 159 atctacatgtacagaggtgacaaggcgttctgcagcgtcgagtgccggtgc 209
           |||||||||||||| ||||| ||||| |||||||||   ||||||||||||
Sbjct: 641 atctacatgtacaggggtgagaaggccttctgcagctcggagtgccggtgc 691
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>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0682E05, complete sequence
          Length = 162223

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                          
Query: 170   cagaggtgacaaggcgttctgcagcgtcgagtgccggtgcaggca 214
             |||||| |||| |||||||||||||| ||| ||||||| ||||||
Sbjct: 75399 cagaggggacagggcgttctgcagcgacgactgccggttcaggca 75443
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                             
Query: 170      cagaggtgacaaggcgttctgcagcgtcgagtgccggtgcaggca 214
                |||||| |||| |||||||||||||| ||| ||||||| ||||||
Sbjct: 25585352 cagaggggacagggcgttctgcagcgacgactgccggttcaggca 25585396



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 296     caccggcggcggcgtcagcttcgc 319
               |||||||||||||| |||||||||
Sbjct: 3479509 caccggcggcggcgccagcttcgc 3479532
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                             
Query: 170      cagaggtgacaaggcgttctgcagcgtcgagtgccggtgcaggca 214
                |||||| |||| |||||||||||||| ||| ||||||| ||||||
Sbjct: 25904022 cagaggggacagggcgttctgcagcgacgactgccggttcaggca 25904066



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 296     caccggcggcggcgtcagcttcgc 319
               |||||||||||||| |||||||||
Sbjct: 3488213 caccggcggcggcgccagcttcgc 3488236
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>ref|XM_467200.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1034

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 156 gacatctacatgtacagaggtgacaaggcgttctgcagcg 195
           ||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 420 gacatcttcatgtacagaggggacacgccgttctgcagcg 459
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>ref|XM_467198.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 770

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 156 gacatctacatgtacagaggtgacaaggcgttctgcagcg 195
           ||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 327 gacatcttcatgtacagaggggacacgccgttctgcagcg 366
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>ref|XM_473678.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 384

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 156 gacatctacatgtacagaggtgacaaggcgttctgcagcg 195
           ||||||| ||||||||||||||||| | | ||||||||||
Sbjct: 211 gacatcttcatgtacagaggtgacatgcccttctgcagcg 250
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>dbj|AK111294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-A08, full
           insert sequence
          Length = 770

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 156 gacatctacatgtacagaggtgacaaggcgttctgcagcg 195
           ||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 327 gacatcttcatgtacagaggggacacgccgttctgcagcg 366
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>dbj|AK071055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077C02, full
           insert sequence
          Length = 1034

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 156 gacatctacatgtacagaggtgacaaggcgttctgcagcg 195
           ||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 420 gacatcttcatgtacagaggggacacgccgttctgcagcg 459
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>dbj|AK060089.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H12, full
           insert sequence
          Length = 1044

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 156 gacatctacatgtacagaggtgacaaggcgttctgcagcg 195
           ||||||| ||||||||||||||||| | | ||||||||||
Sbjct: 446 gacatcttcatgtacagaggtgacatgcccttctgcagcg 485
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>ref|XM_464320.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1237

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 156 gacatctacatgtacagaggtgacaaggcgttctgcagcgtcgagtgccggtgc 209
           ||||||||||||||||| || || || || |||||||||  ||||||| |||||
Sbjct: 738 gacatctacatgtacaggggggagaaagccttctgcagctccgagtgcaggtgc 791
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 241     gcagccactgcgccaagggcgc 262
               ||||||||||||||||||||||
Sbjct: 2862135 gcagccactgcgccaagggcgc 2862156
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>dbj|AK072843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O11, full
           insert sequence
          Length = 1237

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 156 gacatctacatgtacagaggtgacaaggcgttctgcagcgtcgagtgccggtgc 209
           ||||||||||||||||| || || || || |||||||||  ||||||| |||||
Sbjct: 738 gacatctacatgtacaggggggagaaagccttctgcagctccgagtgcaggtgc 791
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 73      cgccggcagcgaggcccgccgc 94
               ||||||||||||||||||||||
Sbjct: 3709656 cgccggcagcgaggcccgccgc 3709635
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>ref|XM_473677.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 339

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 155 tgacatctacatgtacagaggtgacaaggcgttctgcagcg 195
           |||||||| ||||||||| || |||| | ||||||||||||
Sbjct: 96  tgacatcttcatgtacaggggagacacgccgttctgcagcg 136
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>gb|AY257214.1| Ipomoea alba chalcone synthase (CHS-D) mRNA, partial cds
          Length = 939

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 134 caaggatctagccgagaacaa 154
           |||||||||||||||||||||
Sbjct: 318 caaggatctagccgagaacaa 338
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 246    cactgcgccaagggcgcctcc 266
              |||||||||||||||||||||
Sbjct: 179754 cactgcgccaagggcgcctcc 179774
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 246    cactgcgccaagggcgcctcc 266
              |||||||||||||||||||||
Sbjct: 327134 cactgcgccaagggcgcctcc 327154
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>gb|AC159277.3| Mus musculus BAC clone RP23-356J2 from chromosome 17, complete sequence
          Length = 231245

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 270    gcggccgtgcggtcaggacgc 290
              |||||||||||||||||||||
Sbjct: 113798 gcggccgtgcggtcaggacgc 113778
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>gb|AF396669.1| Oryzias latipes choriogenin Hminor gene, partial cds
          Length = 2578

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 395  tgcaaaagcaacaagaaaagaanagaga 422
            |||||||||||||| ||||||| |||||
Sbjct: 1689 tgcaaaagcaacaacaaaagaagagaga 1662
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>dbj|AK070920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072B01, full
           insert sequence
          Length = 768

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 155 tgacatctacatgtacagaggtgacaaggcgttctgcagcg 195
           |||||||| ||||||||| || |||| | ||||||||||||
Sbjct: 33  tgacatcttcatgtacaggggagacacgccgttctgcagcg 73
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>dbj|AK064763.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H07, full
           insert sequence
          Length = 872

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 155 tgacatctacatgtacagaggtgacaaggcgttctgcagcg 195
           |||||||| ||||||||| || |||| | ||||||||||||
Sbjct: 254 tgacatcttcatgtacaggggagacacgccgttctgcagcg 294
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>ref|NM_124077.3| Arabidopsis thaliana unknown protein AT5G47060 mRNA, complete cds
          Length = 977

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 gacatctacatgtacagagg 175
           ||||||||||||||||||||
Sbjct: 373 gacatctacatgtacagagg 392
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 219     ttcatcgacgaggacgccgg 238
               ||||||||||||||||||||
Sbjct: 1101527 ttcatcgacgaggacgccgg 1101546
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>ref|XM_469171.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1421

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 152  caatgacatctacatgtacagaggtgacaaggcgttctgcagcgtcgagtgccggt 207
            ||||||||||| ||| ||| ||||||| || || |||||||||   ||||||||||
Sbjct: 1034 caatgacatcttcatctaccgaggtgataaagcattctgcagcagtgagtgccggt 1089
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>ref|XM_467201.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 378

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 144 gccgagaacaatgacatctacatgtacagaggtgacaaggcgttctgcagcg 195
           |||| |||||| || |||| |||||||||||| ||||   ||||||||||||
Sbjct: 181 gccgggaacaaggatatcttcatgtacagaggcgacaccccgttctgcagcg 232
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>ref|XM_515944.1| PREDICTED: Pan troglodytes similar to N2B-Titin Isoform (LOC459781),
             mRNA
          Length = 18405

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     caccacgcccaagatcatcagcaa 28
             |||||||||||||||| |||||||
Sbjct: 13447 caccacgcccaagatcttcagcaa 13424
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>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 296   caccggcggcggcgtcagcttcgc 319
             |||||||||||||| |||||||||
Sbjct: 73464 caccggcggcggcgccagcttcgc 73487
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>gb|AC116075.5| Rattus norvegicus 6 BAC CH230-139H23 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 153441

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 426    gtttaaagaatggagttaag 445
              ||||||||||||||||||||
Sbjct: 116046 gtttaaagaatggagttaag 116065
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>ref|XM_366656.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG02732.4) partial mRNA
          Length = 1710

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 215 gatattcatcgacgaggacg 234
           ||||||||||||||||||||
Sbjct: 570 gatattcatcgacgaggacg 589
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>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0028C22, complete sequence
          Length = 154228

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    cggcggcggcgtcagcttcg 318
              ||||||||||||||||||||
Sbjct: 124213 cggcggcggcgtcagcttcg 124232
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>ref|NM_133378.2| Homo sapiens titin (TTN), transcript variant N2-A, mRNA
          Length = 101518

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     caccacgcccaagatcatcagcaa 28
             |||||||||||||||| |||||||
Sbjct: 94004 caccacgcccaagatcttcagcaa 93981
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>ref|NM_003319.2| Homo sapiens titin (TTN), transcript variant N2-B, mRNA
          Length = 82027

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     caccacgcccaagatcatcagcaa 28
             |||||||||||||||| |||||||
Sbjct: 74513 caccacgcccaagatcttcagcaa 74490
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>ref|NM_133432.1| Homo sapiens titin (TTN), transcript variant novex-1, mRNA
          Length = 82402

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     caccacgcccaagatcatcagcaa 28
             |||||||||||||||| |||||||
Sbjct: 74888 caccacgcccaagatcttcagcaa 74865
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>ref|NM_133437.1| Homo sapiens titin (TTN), transcript variant novex-2, mRNA
          Length = 82603

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     caccacgcccaagatcatcagcaa 28
             |||||||||||||||| |||||||
Sbjct: 75089 caccacgcccaagatcttcagcaa 75066
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>gb|AF047974.1| Vibrio cholerae exbB-related protein, ExbB2 (exbB2), ExbD2 (exbD2),
            and TonB2 (tonB2) genes, complete cds; and unknown genes
          Length = 5420

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  ctgcttgctgtgccacaagg 138
            ||||||||||||||||||||
Sbjct: 2392 ctgcttgctgtgccacaagg 2373
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>gb|AY144497.1| Oryza sativa (japonica cultivar-group) OsCDPK protein mRNA,
           complete cds
          Length = 1907

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 296 caccggcggcggcgtcagcttcgc 319
           |||||||||||||| |||||||||
Sbjct: 107 caccggcggcggcgccagcttcgc 84
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 300     ggcggcggcgtcagcttcgc 319
               ||||||||||||||||||||
Sbjct: 3975734 ggcggcggcgtcagcttcgc 3975753
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 237     ggcagcagccactgcgccaa 256
               ||||||||||||||||||||
Sbjct: 1674725 ggcagcagccactgcgccaa 1674744
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>emb|X69490.1|HSTITIN H.sapiens mRNA for titin
          Length = 14985

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 5    caccacgcccaagatcatcagcaa 28
            |||||||||||||||| |||||||
Sbjct: 7462 caccacgcccaagatcttcagcaa 7439
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>emb|X64697.1|HSTITINC3 H.sapiens mRNA titin (subclone C37)
          Length = 9300

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 5    caccacgcccaagatcatcagcaa 28
            |||||||||||||||| |||||||
Sbjct: 7462 caccacgcccaagatcttcagcaa 7439
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>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16
          Length = 349746

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   catcgacgaggacgccggca 240
             ||||||||||||||||||||
Sbjct: 44585 catcgacgaggacgccggca 44566
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>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    cgccgtgccaccggcggcgg 307
              ||||||||||||||||||||
Sbjct: 191840 cgccgtgccaccggcggcgg 191821
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>emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin
          Length = 294540

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 5      caccacgcccaagatcatcagcaa 28
              |||||||||||||||| |||||||
Sbjct: 285347 caccacgcccaagatcttcagcaa 285324
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 202     gccggtgcaggcagatattc 221
               ||||||||||||||||||||
Sbjct: 5682499 gccggtgcaggcagatattc 5682518
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>gb|AC026689.6| Homo sapiens chromosome 5 clone CTB-55A14, complete sequence
          Length = 215150

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   tgtttaaagaatggagttaa 444
             ||||||||||||||||||||
Sbjct: 98404 tgtttaaagaatggagttaa 98423
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 299      cggcggcggcgtcagcttcg 318
                ||||||||||||||||||||
Sbjct: 19796946 cggcggcggcgtcagcttcg 19796965



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 225     gacgaggacgccggcagcagccac 248
               |||||||||||||||||| |||||
Sbjct: 9999835 gacgaggacgccggcagccgccac 9999812
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 56     ctcctcatccccttggtcgccggc 79
              ||||||| ||||||||||||||||
Sbjct: 256211 ctcctcacccccttggtcgccggc 256234
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>emb|BX833202.1|CNS09Z3Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL39ZB05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 717

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 gacatctacatgtacagagg 175
           ||||||||||||||||||||
Sbjct: 359 gacatctacatgtacagagg 378
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>emb|BX841728.1|CNS09YKE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL51ZF09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 958

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 gacatctacatgtacagagg 175
           ||||||||||||||||||||
Sbjct: 369 gacatctacatgtacagagg 388
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>gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complete sequence
          Length = 168448

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    accctccatagccccaagat 52
             ||||||||||||||||||||
Sbjct: 56348 accctccatagccccaagat 56367
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>gb|AC009948.3| Homo sapiens BAC clone RP11-65L3 from 2, complete sequence
          Length = 172828

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 5      caccacgcccaagatcatcagcaa 28
              |||||||||||||||| |||||||
Sbjct: 141720 caccacgcccaagatcttcagcaa 141743
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>gb|AF267176.1|AF267176 Pyricularia grisea chromosome 7 clone BAC 6J18, genomic sequence
          Length = 111865

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   gatattcatcgacgaggacg 234
             ||||||||||||||||||||
Sbjct: 98899 gatattcatcgacgaggacg 98918
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>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0466E03
          Length = 138343

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 225   gacgaggacgccggcagcagccac 248
             |||||||||||||||||| |||||
Sbjct: 29139 gacgaggacgccggcagccgccac 29116
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 296     caccggcggcggcgtcagct 315
               ||||||||||||||||||||
Sbjct: 4980724 caccggcggcggcgtcagct 4980743



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 288     cgccgtgccaccggcggcgg 307
               ||||||||||||||||||||
Sbjct: 3590753 cgccgtgccaccggcggcgg 3590772
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>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0034B12
          Length = 124083

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   cggcggcggcgtcagcttcg 318
             ||||||||||||||||||||
Sbjct: 21386 cggcggcggcgtcagcttcg 21405
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>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0450E05
          Length = 176553

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    cggcggcggcgtcagcttcg 318
              ||||||||||||||||||||
Sbjct: 142632 cggcggcggcgtcagcttcg 142651
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>dbj|AK102308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B04, full
           insert sequence
          Length = 2524

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 296 caccggcggcggcgtcagcttcgc 319
           |||||||||||||| |||||||||
Sbjct: 736 caccggcggcggcgccagcttcgc 713
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 220     tcatcgacgaggacgccggc 239
               ||||||||||||||||||||
Sbjct: 3973679 tcatcgacgaggacgccggc 3973660
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>dbj|AK066202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056K06, full
           insert sequence
          Length = 1308

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 152 caatgacatctacatgtacagaggtgacaaggcgttctgcagcgtcgagtgccggt 207
           ||||||||||| ||| ||| ||||||| || || |||||||||   ||||||||||
Sbjct: 921 caatgacatcttcatctaccgaggtgataaagcattctgcagcagtgagtgccggt 976
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 7       ccacgcccaagatcatcagc 26
               ||||||||||||||||||||
Sbjct: 3011537 ccacgcccaagatcatcagc 3011518
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 294     gccaccggcggcggcgtcagcttc 317
               |||||||| |||||||||||||||
Sbjct: 2436572 gccaccggaggcggcgtcagcttc 2436549
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>emb|X92412.1|HSTITINX5 H.sapiens titin gene exon 5
          Length = 19994

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     caccacgcccaagatcatcagcaa 28
             |||||||||||||||| |||||||
Sbjct: 11859 caccacgcccaagatcttcagcaa 11836
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>emb|X90568.1|HSTITIN2B H.sapiens mRNA for titin protein (clone hh1-hh54)
          Length = 81940

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     caccacgcccaagatcatcagcaa 28
             |||||||||||||||| |||||||
Sbjct: 74422 caccacgcccaagatcttcagcaa 74399
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>emb|X52530.1|SPRRK1 S.pombe rrk1 gene for K-RNA (component of RNase P)
          Length = 977

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 331 ctaccaccaacatcaagcaa 350
           ||||||||||||||||||||
Sbjct: 202 ctaccaccaacatcaagcaa 183


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,925,631
Number of Sequences: 3902068
Number of extensions: 3925631
Number of successful extensions: 91079
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89787
Number of HSP's gapped (non-prelim): 1292
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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