ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast57a11 |
|---|---|
| Clone Library Name | barley_pub |
>TORA_ECOLI (P33225) Trimethylamine-N-oxide reductase 1 precursor (EC 1.7.2.3)| (TMAO reductase 1) (Trimethylamine oxidase 1) Length = 848 Score = 33.1 bits (74), Expect = 0.38 Identities = 16/29 (55%), Positives = 18/29 (62%) Frame = -2 Query: 439 VELDHPPLQVRHHAGDGDPDEELLGHDAG 353 VE DHP + VRH A DPD E LG +G Sbjct: 621 VEFDHPQMFVRHQAFREDPDLEPLGTPSG 649
>TORA_ECOL6 (Q8CW73) Trimethylamine-N-oxide reductase 1 precursor (EC 1.7.2.3)| (TMAO reductase 1) (Trimethylamine oxidase 1) Length = 848 Score = 33.1 bits (74), Expect = 0.38 Identities = 16/29 (55%), Positives = 18/29 (62%) Frame = -2 Query: 439 VELDHPPLQVRHHAGDGDPDEELLGHDAG 353 VE DHP + VRH A DPD E LG +G Sbjct: 621 VEFDHPQMFVRHQAFREDPDLEPLGTPSG 649
>TORA_ECO57 (P58360) Trimethylamine-N-oxide reductase 1 precursor (EC 1.7.2.3)| (TMAO reductase 1) (Trimethylamine oxidase 1) Length = 848 Score = 33.1 bits (74), Expect = 0.38 Identities = 16/29 (55%), Positives = 18/29 (62%) Frame = -2 Query: 439 VELDHPPLQVRHHAGDGDPDEELLGHDAG 353 VE DHP + VRH A DPD E LG +G Sbjct: 621 VEFDHPQMFVRHQAFREDPDLEPLGTPSG 649
>TORA_SALTY (Q8ZKZ7) Trimethylamine-N-oxide reductase precursor (EC 1.7.2.3)| (TMAO reductase) (Trimethylamine oxidase) Length = 850 Score = 32.7 bits (73), Expect = 0.50 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -2 Query: 439 VELDHPPLQVRHHAGDGDPDEELLGHDAG 353 +E DHP + VRH A DPD E LG +G Sbjct: 621 IEFDHPQMFVRHQAFREDPDLEPLGTPSG 649
>TORA_SALTI (Q8Z2M4) Trimethylamine-N-oxide reductase precursor (EC 1.7.2.3)| (TMAO reductase) (Trimethylamine oxidase) Length = 850 Score = 32.7 bits (73), Expect = 0.50 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -2 Query: 439 VELDHPPLQVRHHAGDGDPDEELLGHDAG 353 +E DHP + VRH A DPD E LG +G Sbjct: 621 IEFDHPQMFVRHQAFREDPDLEPLGTPSG 649
>WDR19_MOUSE (Q3UGF1) WD-repeat protein 19| Length = 1341 Score = 28.9 bits (63), Expect = 7.2 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = +2 Query: 200 PDSVVSYTFDNATGNFHIELASSCYVWFGDHYV 298 PD+ V F A GN CY W+GD Y+ Sbjct: 219 PDNPVDLEFQQAYGNI------VCYSWYGDGYI 245 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,709,343 Number of Sequences: 219361 Number of extensions: 630577 Number of successful extensions: 2169 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2169 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
