Clone Information

BLAST Search Result

Clone Name	bast57a07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CHOMT_MEDSA (P93324) Isoliquiritigenin 2'-O-methyltransferase (E...	47	1e-05
2	COMT1_CATRO (Q8W013) Caffeic acid 3-O-methyltransferase (EC 2.1....	47	1e-05
3	COMT1_PRUDU (Q43609) Caffeic acid 3-O-methyltransferase (EC 2.1....	42	3e-04
4	OMT1_ORYSA (Q6ZD89) Quercetin 3-O-methyltransferase 1 (EC 2.1.1....	42	5e-04
5	COMT1_SACOF (O82054) Caffeic acid 3-O-methyltransferase (EC 2.1....	41	6e-04
6	COMT1_POPTM (Q00763) Caffeic acid 3-O-methyltransferase 1 (EC 2....	41	6e-04
7	COMT1_POPKI (Q43046) Caffeic acid 3-O-methyltransferase 1 (EC 2....	41	6e-04
8	COMT1_CLABR (O23760) Caffeic acid 3-O-methyltransferase (EC 2.1....	40	0.001
9	IEMT_CLABR (O04385) (Iso)eugenol O-methyltransferase (EC 2.1.1.1...	40	0.002
10	COMT1_ROSCH (Q8GU25) Caffeic acid 3-O-methyltransferase (EC 2.1....	39	0.004
11	COMT3_POPKI (Q43047) Caffeic acid 3-O-methyltransferase 3 (EC 2....	37	0.009
12	COMT2_OCIBA (Q9XGV9) Caffeic acid 3-O-methyltransferase 2 (EC 2....	37	0.015
13	COMT2_POPTM (Q41086) Caffeic acid 3-O-methyltransferase 2 (EC 2....	34	0.097
14	RPOA_PRRSR (Q9WJB2) Replicase polyprotein 1ab (ORF1ab polyprotei...	33	0.17
15	IMT1_MESCR (P45986) Inositol 4-methyltransferase (EC 2.1.1.129)	33	0.22
16	EX5C_MYCTU (P96921) Exodeoxyribonuclease V gamma chain (EC 3.1.1...	32	0.37
17	ATG18_NEUCR (Q96U88) Autophagy-related protein 18	30	1.8
18	RPOA_PRRS1 (Q9YN02) Replicase polyprotein 1ab (ORF1ab polyprotei...	30	1.8
19	THA10_PONPY (Q5NVM3) THAP domain-containing protein 10	29	2.4
20	RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2	29	3.1
21	VE2_BPV4 (P08345) Regulatory protein E2	29	3.1
22	MYRIP_MOUSE (Q8K3I4) Rab effector MyRIP (Myosin-VIIa- and Rab-in...	29	3.1
23	LRP1_HHV1F (P17588) Latency-related protein 1	28	4.1
24	HNF1A_HUMAN (P20823) Hepatocyte nuclear factor 1-alpha (HNF-1A) ...	28	4.1
25	ILVD2_BORBR (Q7WJP7) Dihydroxy-acid dehydratase 2 (EC 4.2.1.9) (...	28	4.1
26	MLO1_ARATH (O49621) MLO-like protein 1 (AtMlo1) (MLO protein hom...	28	4.1
27	PPB_BOMMO (P29523) Membrane-bound alkaline phosphatase precursor...	28	5.3
28	RPOA_PRRSB (Q8B912) Replicase polyprotein 1ab (ORF1ab polyprotei...	28	5.3
29	GSPL_AERHY (P45789) General secretion pathway protein L	28	5.3
30	CENB1_HUMAN (Q15027) Centaurin-beta 1 (Cnt-b1)	28	5.3
31	CSUP_DROME (Q9V3A4) Protein catecholamines up	28	5.3
32	MSL3_DROME (P50536) Protein male-specific lethal-3	28	5.3
33	TLL1_BRARE (O57460) Dorsal-ventral patterning tolloid-like prote...	28	5.3
34	PCX3_MOUSE (Q8VI59) Pecanex-like protein 3	28	5.3
35	DMPM_STRMI (P42712) O-demethylpuromycin-O-methyltransferase (EC ...	28	7.0
36	DGCR8_HUMAN (Q8WYQ5) DGCR8 protein (DiGeorge syndrome critical r...	28	7.0
37	MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-...	28	7.0
38	TATA_RHOER (P72267) Sec-independent protein translocase protein ...	28	7.0
39	Y3115_MYCBO (P67209) Hypothetical UPF0089 protein Mb3115	28	7.0
40	Y3088_MYCTU (P67208) Hypothetical UPF0089 protein Rv3088/MT3173	28	7.0
41	LPHN1_BOVIN (O97831) Latrophilin-1 precursor (Calcium-independen...	28	7.0
42	VATB2_HORVU (Q40079) Vacuolar ATP synthase subunit B isoform 2 (...	28	7.0
43	AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-al...	28	7.0
44	RNB_YERPE (Q8ZED8) Exoribonuclease 2 (EC 3.1.13.1) (Exoribonucle...	27	9.1
45	CBP1_CAEEL (P34545) Protein cbp-1	27	9.1
46	RAI1_MOUSE (Q61818) Retinoic acid-induced protein 1	27	9.1
47	MAAZ3_SCHCO (P37937) Mating-type protein A-alpha Z3	27	9.1
48	KEL1_YEAST (P38853) Kelch repeat-containing protein 1	27	9.1
49	VNUA_PRVKA (P33485) Probable nuclear antigen	27	9.1
50	PKHG4_HUMAN (Q58EX7) Puratrophin-1 (Pleckstrin homology domain-c...	27	9.1
51	RBGPR_RAT (Q5U1Z0) Rab3 GTPase-activating protein non-catalytic ...	27	9.1
52	FBRL_CANGA (Q6FN88) Fibrillarin	27	9.1

>CHOMT_MEDSA (P93324) Isoliquiritigenin 2'-O-methyltransferase (EC 2.1.1.-)|
           (Chalcone O-methyltransferase) (ChOMT)
          Length = 372

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 39/105 (37%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
 Frame = +1

Query: 100 LAMMELANMIAVPMAPTAVIRLG----VPAAVWAGGANLPLSAAELLPAG--HPD-PSVL 258
           L+ M L   +  P    A I L     +  A   G    P   A  LPA   H D P+ L
Sbjct: 26  LSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRL 85

Query: 259 ERLLRLLASRGVFSEHAA---DGGRERRYALTAVGRTLVPSAPSG 384
           +R+LRLLAS  V +       DGG ER Y L+ VG+ LVP    G
Sbjct: 86  DRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRG 130

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>COMT1_CATRO (Q8W013) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase) (COMT) (CAOMT)
          Length = 363

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
 Frame = +1

Query: 100 LAMMELANMIAVPMAPTAVIRLGVPAAVWAGGANLPLSAAEL---LPAGHPD-PSVLERL 267
           L+ M LA+   +PM   + I L +   +   G    +S +EL   LP  +PD P +L+R+
Sbjct: 21  LSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRI 80

Query: 268 LRLLASRGVFS---EHAADGGRERRYALTAVGRTL 363
           LRLLAS  V +   +   DGG ER Y+L  V + L
Sbjct: 81  LRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFL 115

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>COMT1_PRUDU (Q43609) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase) (COMT) (CAOMT)
          Length = 365

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
 Frame = +1

Query: 100 LAMMELANMIAVPMAPTAVIRLGVPAAVWAGGANLPLSAAEL---LPAGHPD-PSVLERL 267
           L  M+LA+   +PM   A I L +   +   G  + LS  ++   LP  +PD P +L+R+
Sbjct: 21  LFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRM 80

Query: 268 LRLLASRGVFS---EHAADGGRERRYALTAVGRTL 363
           LRLLAS  + +      ADG  ER Y L  V + L
Sbjct: 81  LRLLASYSILTYSLRTLADGKVERLYGLGPVCKFL 115

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>OMT1_ORYSA (Q6ZD89) Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (Flavonol|
           3-O-methyltransferase 1)
          Length = 368

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 14/102 (13%)
 Frame = +1

Query: 109 MELANMIAVPMAPTAVIRLGV-----PAAVWAGGANL----PLSAAELLP--AGHPDPSV 255
           ++LA+   +PM     I LG+      AAV  GG       P   A+ LP  A      +
Sbjct: 21  LQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADM 80

Query: 256 LERLLRLLASRGVFS---EHAADGGRERRYALTAVGRTLVPS 372
           ++R+LRLLAS  V     E  ADG   RRYA   V + L P+
Sbjct: 81  VDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPN 122

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>COMT1_SACOF (O82054) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase) (COMT) (CAOMT)
          Length = 362

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
 Frame = +1

Query: 109 MELANMIAVPMAPTAVIRLGV----PAAVWAGGANLPLSAAELLPAGHPDPS---VLERL 267
           M+LA+   +PM     + LG+     A   AG A  P      LP    +P    +++R+
Sbjct: 21  MQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRM 80

Query: 268 LRLLASRGVFS--EHAADGGRERRYALTAVGRTLVPS 372
           LRLLAS  V        DG  ERRY+   VG+ L P+
Sbjct: 81  LRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPN 117

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>COMT1_POPTM (Q00763) Caffeic acid 3-O-methyltransferase 1 (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase 1) (COMT-1) (CAOMT-1)
          Length = 365

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
 Frame = +1

Query: 100 LAMMELANMIAVPMAPTAVIRLGVPAAVWAGGANLPLSAAEL---LPAGHPD-PSVLERL 267
           L  M+LA+   +PM     I L +   +   G    LS +E+   LP  +PD P +L+R+
Sbjct: 21  LFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRI 80

Query: 268 LRLLASRGVFS---EHAADGGRERRYALTAVGRTL 363
           LRLLAS  + +   +   DG  ER Y L  V + L
Sbjct: 81  LRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFL 115

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>COMT1_POPKI (Q43046) Caffeic acid 3-O-methyltransferase 1 (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase 1) (COMT-1) (CAOMT-1)
          Length = 365

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
 Frame = +1

Query: 100 LAMMELANMIAVPMAPTAVIRLGVPAAVWAGGANLPLSAAEL---LPAGHPD-PSVLERL 267
           L  M+LA+   +PM     I L +   +   G    LS +E+   LP  +PD P +L+R+
Sbjct: 21  LFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRI 80

Query: 268 LRLLASRGVFS---EHAADGGRERRYALTAVGRTL 363
           LRLLAS  + +   +   DG  ER Y L  V + L
Sbjct: 81  LRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFL 115

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>COMT1_CLABR (O23760) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase) (COMT) (CAOMT)
          Length = 370

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
 Frame = +1

Query: 100 LAMMELANMIAVPMAPTAVIRLGV---PAAVWAGGANLPLSAAEL---LPAGHPD-PSVL 258
           L  M+LA+   +PM   A I L V    A     G+   +S AE+   LP  +PD P +L
Sbjct: 23  LFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVML 82

Query: 259 ERLLRLLASRGVFS---EHAADGGRERRYALTAVGRTL 363
           +R+LRLLAS  V +       DG  ER Y L  V + L
Sbjct: 83  DRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFL 120

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>IEMT_CLABR (O04385) (Iso)eugenol O-methyltransferase (EC 2.1.1.146)|
           (S-adenosysl-L-methionine:(Iso)eugenol
           O-methyltransferase) (IEMT)
          Length = 368

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
 Frame = +1

Query: 100 LAMMELANMIAVPMAPTAVIRLGV----PAAVWAGGANLPLSAAELLPAGHPD-PSVLER 264
           L  M+LA+   +PMA  A I L V      +V   G   P   A  LP  +P+ P +L+R
Sbjct: 23  LFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDR 82

Query: 265 LLRLLASRGVFS---EHAADGGRERRYALTAVGRTL 363
           +LRLLAS  V +        G  ER Y L  V + L
Sbjct: 83  VLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFL 118

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>COMT1_ROSCH (Q8GU25) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase) (COMT) (CAOMT)
          Length = 365

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
 Frame = +1

Query: 100 LAMMELANMIAVPMAPTAVIRLG---VPAAVWAGGANLPLSAAELLPAGHPD-PSVLERL 267
           L  M+LA+   +PM   A I L    + A    G    P   A  LP  +P+ P +L+R+
Sbjct: 21  LFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRM 80

Query: 268 LRLLASRGVFS---EHAADGGRERRYALTAVGRTL 363
           LRLLAS  + +       DG  ER Y L  V + L
Sbjct: 81  LRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFL 115

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>COMT3_POPKI (Q43047) Caffeic acid 3-O-methyltransferase 3 (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase 1) (COMT-3) (CAOMT-3)
          Length = 364

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
 Frame = +1

Query: 109 MELANMIAVPMAPTAVIRLGVPAAVWAGGANLPLSAAEL---LPAGHPD-PSVLERLLRL 276
           M+L +   +PM     I L +   +   G    LS +++   LP  +PD P +L+R+LRL
Sbjct: 23  MQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRL 82

Query: 277 LASRGVF---SEHAADGGRERRYALTAVGRTL 363
           LAS  +         DG  ER Y L +V + L
Sbjct: 83  LASYSILICSLRDLPDGKVERLYGLASVCKFL 114

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>COMT2_OCIBA (Q9XGV9) Caffeic acid 3-O-methyltransferase 2 (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase 2) (COMT-2) (CAOMT-2)
          Length = 361

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
 Frame = +1

Query: 100 LAMMELANMIAVPMAPTAVIRLGVPAAVWAGGANLPLS----AAELLPAGHPDPSVLERL 267
           L  M+LA+   +PM   + I L +   +   GA   +S    AA+LL        +L+R+
Sbjct: 19  LFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRI 78

Query: 268 LRLLASRGVFS---EHAADGGRERRYALTAVGRTL 363
           LRLL S  +     +   DGG +R Y L  V + L
Sbjct: 79  LRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFL 113

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>COMT2_POPTM (Q41086) Caffeic acid 3-O-methyltransferase 2 (EC 2.1.1.68)|
           (S-adenosysl-L-methionine:caffeic acid
           3-O-methyltransferase 2) (COMT-2) (CAOMT-2)
          Length = 364

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
 Frame = +1

Query: 109 MELANMIAVPMAPTAVIRLG---VPAAVWAGGANLPLSAAELLPAGHPD-PSVLERLLRL 276
           ++L +   +PM     I L    + A    G    P   A  LP  +P+ P +L+R+LRL
Sbjct: 23  LQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRL 82

Query: 277 LASRGVF---SEHAADGGRERRYALTAVGRTL 363
           LAS  +         DG  ER Y L +V + L
Sbjct: 83  LASYSILICSLRDLPDGKVERLYGLASVCKFL 114

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>RPOA_PRRSR (Q9WJB2) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:|
            Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha
            papain-like cysteine proteinase (EC 3.4.22.-)
            (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase
            (EC 3.4.22.-) (PCP
          Length = 3960

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -2

Query: 324  PAAVGCVLREDAAGGEQA--EEPLEDGRVRVARREQLRGRERQVGAASPH 181
            P  V   L +   GG Q   E     GR+ V  RE L  RER+V A+ PH
Sbjct: 3664 PGVVSYYLTKFVKGGAQVLPETVFSTGRIEVDCREYLDDREREVAASLPH 3713

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>IMT1_MESCR (P45986) Inositol 4-methyltransferase (EC 2.1.1.129)|
          Length = 365

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
 Frame = +1

Query: 115 LANMIAVPMAPTAVIRLGVPAAVWAGGANLPLSAAEL---LPAGHPD-PSVLERLLRLLA 282
           LAN  A PM   +   L +       G  + +S +E+   + A +P+ P +L+R+LRLLA
Sbjct: 28  LANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLA 87

Query: 283 SRGVFS--EHAADGGRERRY 336
           S  V +      +GG +R Y
Sbjct: 88  SHSVLTCKLQKGEGGSQRVY 107

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>EX5C_MYCTU (P96921) Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)|
          Length = 1097

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -2

Query: 297 EDAAGGEQAEEPLEDGRVRVARREQLRGRERQVGAAS-PHRGRHAQ 163
           +DAA  E     L  GR+ V R +++R R R + AA+  HR  H Q
Sbjct: 859 DDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAAAALAHRDGHGQ 904

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>ATG18_NEUCR (Q96U88) Autophagy-related protein 18|
          Length = 461

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 75  GDVPAGGTSGDDGAGQHDRRPDGADG 152
           G+VP+ G +G++G+G H R P G+ G
Sbjct: 323 GEVPSAG-NGNNGSGSHKREPSGSFG 347

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>RPOA_PRRS1 (Q9YN02) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:|
            Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha
            papain-like cysteine proteinase (EC 3.4.22.-)
            (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase
            (EC 3.4.22.-) (PCP
          Length = 3966

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = -2

Query: 324  PAAVGCVLREDAAGGEQA--EEPLEDGRVRVARREQLRGRERQVGAASPH 181
            P  V   L +   G  Q   E     GR+ V  RE L  RER+V A+ PH
Sbjct: 3670 PGVVSYYLTKFVKGEAQLLPETVFSTGRIEVDCREYLDDREREVAASLPH 3719

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>THA10_PONPY (Q5NVM3) THAP domain-containing protein 10|
          Length = 264

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 12  LHLTEDVVVVAAGSRARHRRPGDVPAGGTSGDDGAGQHDRRPDGADGRH 158
           L  ++ + +VA      HR P   P GG  GD  AG+ D R +    RH
Sbjct: 73  LRFSQRLRLVAGAVPTLHRVPAPAPKGGEEGDQ-AGRPDTRGELQAARH 120

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>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2|
          Length = 326

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = -2

Query: 375 RRGHQGAPHGRQRVPPLPAAVGCVLREDAAGGEQAEEPLEDGRVRVARREQLRGRERQVG 196
           ++ H G+P GR           C  R+        E+P  + +    R  + + RER+ G
Sbjct: 221 KKSHSGSPDGRSSYHARAEDPECKARK--------EKPKHEHKSASRREAEEKSRERERG 272

Query: 195 AAS-PHRGRH 169
            +S  H GRH
Sbjct: 273 RSSGTHSGRH 282

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>VE2_BPV4 (P08345) Regulatory protein E2|
          Length = 334

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 23/72 (31%), Positives = 31/72 (43%)
 Frame = -2

Query: 381 GGRRGHQGAPHGRQRVPPLPAAVGCVLREDAAGGEQAEEPLEDGRVRVARREQLRGRERQ 202
           GG+RG Q   H R R  P P +       DA G +Q        R + + R + R R R 
Sbjct: 135 GGQRGTQTGDHARGRSRPSPRS-----SRDARGRQQ--------RAQSSSRSRSRSRSR- 180

Query: 201 VGAASPHRGRHA 166
               SP +G H+
Sbjct: 181 ----SPTKGPHS 188

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>MYRIP_MOUSE (Q8K3I4) Rab effector MyRIP (Myosin-VIIa- and Rab-interacting|
           protein) (Exophilin-8) (Slp homolog lacking C2 domains
           c)
          Length = 856

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -2

Query: 330 PLPAAVGCVLREDAAGGEQAEEPLEDGRVRVARREQLRGRERQVGAASPHRG 175
           PL   +       AAGGE ++    +  +R A R   R R  +VG    +RG
Sbjct: 486 PLQGELDVNFNPQAAGGETSDSSDPEETLRTAERRARRWRRARVGPEESNRG 537

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>LRP1_HHV1F (P17588) Latency-related protein 1|
          Length = 340

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 387 RAGGRRGHQGAPHGRQRVPPLP 322
           R GGRRG QG P      PP P
Sbjct: 319 RGGGRRGRQGGPGPTLAAPPRP 340

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>HNF1A_HUMAN (P20823) Hepatocyte nuclear factor 1-alpha (HNF-1A) (Liver-specific|
           transcription factor LF-B1) (LFB1) (Transcription factor
           1) (TCF-1)
          Length = 631

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 118 PAPSSPDVPPAGTSPGRRWRARL-PAATTTTSSVRWSGGG 2
           PA SSP +PP   SP +    R    AT+ T+ V  S GG
Sbjct: 300 PAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGG 339

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>ILVD2_BORBR (Q7WJP7) Dihydroxy-acid dehydratase 2 (EC 4.2.1.9) (DAD 2)|
          Length = 570

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 133 VPMAPTAVIRLGVPAAVWAGGANLPLSAA 219
           +P    A++RL VPA    GGA LP  AA
Sbjct: 128 LPAMMMAIVRLNVPAVFLYGGATLPGHAA 156

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>MLO1_ARATH (O49621) MLO-like protein 1 (AtMlo1) (MLO protein homolog 1)|
           (AtMLO-H1)
          Length = 526

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 24  EDVVVVAAGSRARHRRPGDVPAGGTSGDDGAGQHDRRPDGADGRHP 161
           E+V V   G   + ++  D+ A  ++GD+G+ Q    PD   G  P
Sbjct: 447 ENVQVGLVGWAQKVKQKRDLKAAASNGDEGSSQAGPGPDSGSGSAP 492

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>PPB_BOMMO (P29523) Membrane-bound alkaline phosphatase precursor (EC 3.1.3.1)|
           (M-ALP)
          Length = 547

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 26/73 (35%), Positives = 33/73 (45%)
 Frame = -2

Query: 381 GGRRGHQGAPHGRQRVPPLPAAVGCVLREDAAGGEQAEEPLEDGRVRVARREQLRGRERQ 202
           GG  G  GA  GR  +PP  A  G    E +A    A E      VR A +E +  RER+
Sbjct: 6   GGGGGGGGAGEGRGPLPPGAARAG----EASAATRSAAESEASFWVREA-QEAIERRERE 60

Query: 201 VGAASPHRGRHAQ 163
            GA +     HA+
Sbjct: 61  -GAGAKQAAGHAK 72

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>RPOA_PRRSB (Q8B912) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:|
            Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha
            papain-like cysteine proteinase (EC 3.4.22.-)
            (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase
            (EC 3.4.22.-) (PCP
          Length = 3963

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = -2

Query: 324  PAAVGCVLREDAAGGEQA--EEPLEDGRVRVARREQLRGRERQVGAASPH 181
            P  V   L +   G  Q   E     GR+ V  RE L  RER+V  + PH
Sbjct: 3667 PGVVSYYLTKFVRGEAQVLPETVFSTGRIEVDCREYLDDREREVAESLPH 3716

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>GSPL_AERHY (P45789) General secretion pathway protein L|
          Length = 389

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -2

Query: 306 VLREDAAGGEQAEEPLEDGRVRVARREQLRGR--ERQVGAASPHRGR 172
           VLR DAA GE   +    G   + R  +L G+  E Q G  + HRG+
Sbjct: 342 VLRFDAARGELRLQVTAPGFAEIERFRELAGKRFEVQQGEGAQHRGQ 388

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>CENB1_HUMAN (Q15027) Centaurin-beta 1 (Cnt-b1)|
          Length = 740

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 378 GRRGHQGAPHGRQRVPPLPA 319
           GRRG +G P G+  VPP P+
Sbjct: 528 GRRGGRGRPRGQPPVPPKPS 547

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>CSUP_DROME (Q9V3A4) Protein catecholamines up|
          Length = 449

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 381 GGRRGHQGAPHGRQRVPPLPAAVGCVLREDAAGGEQAEEP 262
           GG  GH G  HG  +  P+PA      +ED+  G++  +P
Sbjct: 247 GGHGGH-GHSHGAPKPKPVPAKKKSSDKEDSGDGDKPAKP 285

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>MSL3_DROME (P50536) Protein male-specific lethal-3|
          Length = 512

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -2

Query: 369 GHQGAPHGRQRVPPLPAAVGCVLREDAAGGEQAEEPLEDGRVRVARREQ 223
           GH  A H    + P P A G   R+++ G  + + P  DGR++  R  Q
Sbjct: 131 GHLEAEH---EMAPTPRAAGNRTRDNSGGKRKEKPPSGDGRLKGNRGRQ 176

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>TLL1_BRARE (O57460) Dorsal-ventral patterning tolloid-like protein 1 precursor|
           (EC 3.4.24.-) (Mini fin protein)
          Length = 1022

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = -1

Query: 121 WPAPSSPDVPPAGT-----SPGRRWRARLPAATTTTSSVRWSGG 5
           WP  SS DV    T     +  R  ++R+P A T+ +   W GG
Sbjct: 126 WPVNSSKDVSSIKTGIRRVNSARNVKSRVPRAATSRAEKIWPGG 169

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>PCX3_MOUSE (Q8VI59) Pecanex-like protein 3|
          Length = 1620

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
 Frame = -1

Query: 121  WPAPSSPDVPPAGTSPGRRWRARLPAATTTTSSV----RWSGGG 2
            WP P  P  PPA  +P    R   P+     +S     +WS GG
Sbjct: 1489 WPPPRLPGPPPASPAPTEGPRPSRPSGPALLNSEGPSGKWSLGG 1532

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>DMPM_STRMI (P42712) O-demethylpuromycin-O-methyltransferase (EC 2.1.1.38)|
          Length = 376

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 20/56 (35%), Positives = 25/56 (44%)
 Frame = +1

Query: 211 SAAELLPAGHPDPSVLERLLRLLASRGVFSEHAADGGRERRYALTAVGRTLVPSAP 378
           +AAEL  +   DP    RLLR  A+ G+  E  A      R+ LT  G  L    P
Sbjct: 75  AAAELAASLDTDPVATLRLLRAFAALGLAEETGAG-----RFRLTPAGHRLRTDVP 125

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>DGCR8_HUMAN (Q8WYQ5) DGCR8 protein (DiGeorge syndrome critical region 8)|
          Length = 773

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
 Frame = -2

Query: 372 RGHQGAPHGRQRVPPLPAAVGCVLREDAAGGE-QAEEPLED-----GRVRVARREQLRGR 211
           R  Q  P  +   PPL  + G  + +  +GG+ Q+E P ED     G   +++    +GR
Sbjct: 25  RPFQALPREQSPPPPLQTSSGAEVMDVGSGGDGQSELPAEDPFNFYGASLLSKGSFSKGR 84

Query: 210 ---ERQVGAASPHRGRHA 166
              +      SP   RHA
Sbjct: 85  LLIDPNCSGHSPRTARHA 102

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>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding|
           protein MBD6)
          Length = 1003

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 103 PDVPPAGTSPGRRWRARLPAATTTTS 26
           P +PP  T  GRR RA+ P+A+ ++S
Sbjct: 333 PPLPPPSTLQGRRPRAQAPSASHSSS 358

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>TATA_RHOER (P72267) Sec-independent protein translocase protein tatA/E homolog|
          Length = 98

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 118 PAPSSPDVPPAGTSPGRRWRARLPAATTTTSSV 20
           PAP++   PP  ++P     A LP A TTT+ V
Sbjct: 53  PAPTAQSAPPPQSAP-----AELPVADTTTAPV 80

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>Y3115_MYCBO (P67209) Hypothetical UPF0089 protein Mb3115|
          Length = 474

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
 Frame = +1

Query: 190 GGANLPLSAAELLPAGHPDPSVLERLLRLLASRGVFSEHAADGGR------ERRYALTAV 351
           GG N    +AEL+P G P  S +ERL  + A+    +  A D GR       + YAL  +
Sbjct: 311 GGGNRV--SAELVPMGAPKASPVERLKEINAA----TTRAKDKGRGMQTTSRQAYALLLL 364

Query: 352 GRTLVPSA 375
           G   V  A
Sbjct: 365 GSLTVADA 372

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>Y3088_MYCTU (P67208) Hypothetical UPF0089 protein Rv3088/MT3173|
          Length = 474

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
 Frame = +1

Query: 190 GGANLPLSAAELLPAGHPDPSVLERLLRLLASRGVFSEHAADGGR------ERRYALTAV 351
           GG N    +AEL+P G P  S +ERL  + A+    +  A D GR       + YAL  +
Sbjct: 311 GGGNRV--SAELVPMGAPKASPVERLKEINAA----TTRAKDKGRGMQTTSRQAYALLLL 364

Query: 352 GRTLVPSA 375
           G   V  A
Sbjct: 365 GSLTVADA 372

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>LPHN1_BOVIN (O97831) Latrophilin-1 precursor (Calcium-independent|
            alpha-latrotoxin receptor 1)
          Length = 1472

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -2

Query: 381  GGRRGHQGAPHGRQRVPPLPAAVGCVLREDAAGGEQAE 268
            GG  G +G P     VPP+P   G    E+ AGG  A+
Sbjct: 1294 GGSSGAKGPPPPEPPVPPVPGGSG----EEEAGGPGAD 1327

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>VATB2_HORVU (Q40079) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14)|
           (V-ATPase B subunit 2) (Vacuolar proton pump B subunit
           2)
          Length = 483

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +1

Query: 139 MAPTAVIRLGVPAAVWAGGANLPLSAAELLPAGHPDPSVLERLLRL--LASRGVFSEHAA 312
           M  T +  + V  ++ A G  +PL +A    AG P   +  ++ R   L  R   S+HAA
Sbjct: 138 MIQTGISTIDVMNSI-ARGQKIPLFSA----AGLPHNEIAAQICRQAGLVKRLEQSKHAA 192

Query: 313 DGGRERRYAL 342
           +GG E  +A+
Sbjct: 193 EGGEEDNFAI 202

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>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase) (Isozyme 1B)
          Length = 348

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
 Frame = -1

Query: 106 SPDVPPAGTSP----GRRWRARLPAATTTT---SSVRWSGG 5
           S  +PP+  SP    GRRWR    A+ TTT   +   WS G
Sbjct: 203 STSMPPSRASPWPRYGRRWRTAGTASRTTTRTRTGRSWSTG 243

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>RNB_YERPE (Q8ZED8) Exoribonuclease 2 (EC 3.1.13.1) (Exoribonuclease II)|
           (Ribonuclease II) (RNase II)
          Length = 644

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = -2

Query: 282 GEQAEEPLEDGRVRVARREQL-RGRERQVG 196
           G+QAE+P E+  V++A R +L R  ER VG
Sbjct: 517 GQQAEKPQEEITVQLAERRRLNRMAERDVG 546

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>CBP1_CAEEL (P34545) Protein cbp-1|
          Length = 2056

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = -2

Query: 369 GHQGAPHGRQRVPPLP--AAVGCVLREDAAGGEQAEEPLEDGRVRVARREQLRGRERQVG 196
           GH G  HG     P P  AA     ++ AA   QA+          A+++Q + RE++  
Sbjct: 324 GHPGMSHGPPNGQPGPQAAAAQHAAQQQAAAQAQAQ--------AAAQQQQQQQREQEAA 375

Query: 195 AASPHRG 175
           AA+   G
Sbjct: 376 AAAQRNG 382

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>RAI1_MOUSE (Q61818) Retinoic acid-induced protein 1|
          Length = 1889

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = +3

Query: 66   RRPGDVPAGGTSGDDGAGQHDRRPDGAD 149
            RRPG  PAG   G  G GQ      GAD
Sbjct: 1338 RRPGGSPAGAEEGLGGMGQMLPAASGAD 1365

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>MAAZ3_SCHCO (P37937) Mating-type protein A-alpha Z3|
          Length = 891

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 118 PAPSSPDVPPAGTSPGRRWRARLPAATTTTSS 23
           P    PD  P GT P +  +A  PA+T+TT S
Sbjct: 528 PVTMGPDGVPLGTVPSKTTKA--PASTSTTKS 557

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>KEL1_YEAST (P38853) Kelch repeat-containing protein 1|
          Length = 1164

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +1

Query: 199 NLPLSAAELLPAGHPDP---SVLERLLRLLASRGVFSEH 306
           N+P+SAA L  A  P P   S  +RL R + +R V +EH
Sbjct: 490 NVPISAAPLASAPSPAPKDFSDADRLNREVHNRNVSTEH 528

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
 Frame = -2

Query: 375 RRGHQGAPHGRQ-----RVPPLPAAVGCVLREDAAGGEQAEEPLEDG--------RVRVA 235
           RRG +GA  GRQ      +   PAA G     D  G ++  EP   G        RV+V 
Sbjct: 499 RRGAEGAQLGRQALGAAELGEAPAAAG-----DEDGPQRGAEPPAVGRAVPEGGARVKVR 553

Query: 234 RREQLRGRERQVGAASPHRGRHA 166
             E  RG       A+ H G HA
Sbjct: 554 VPEPERGALAGHVLAAVHGGEHA 576

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>PKHG4_HUMAN (Q58EX7) Puratrophin-1 (Pleckstrin homology domain-containing|
           family G member 4) (Purkinje cell atrophy-associated
           protein 1)
          Length = 1191

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 187 AGGANLPLSAAELLPAGHPDPSVLERLLRLLA 282
           AGG  LP ++  + P G  DP  L RL  +LA
Sbjct: 707 AGGGALPQASPTVPPPGSSDPRSLNRLQLVLA 738

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>RBGPR_RAT (Q5U1Z0) Rab3 GTPase-activating protein non-catalytic subunit (Rab3|
            GTPase-activating protein 150 kDa subunit) (Rab3-GAP
            p150) (Rab3-GAP regulatory subunit) (RAB3-GAP150)
          Length = 1386

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +1

Query: 208  LSAAELLPAGHPDP---SVLERLLRLLASRGVFSEHAADGGRERRYALT 345
            L++ +LLP+G  DP   SV ++ L  + S  V ++H+ D     R A T
Sbjct: 1192 LTSIQLLPSGEMDPNFISVRQQFLLKVVSAAVQAQHSKDKDPSARAADT 1240

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>FBRL_CANGA (Q6FN88) Fibrillarin|
          Length = 323

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = -2

Query: 381 GGRRGHQGAPHGRQRVPPLPAAVGCVLREDAAGGEQAEEPLEDGRVRVARREQ 223
           GGR G +G P G  R  P   A G        G +   EP +   V +AR ++
Sbjct: 47  GGRGGSRGGPRGGSRGGPRGGARGGARGGAKGGAKVVIEPHKHDGVYIARGKE 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,683,556
Number of Sequences: 219361
Number of extensions: 756632
Number of successful extensions: 4421
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 3995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4416
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result