ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast57a04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469861.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2568 Score = 404 bits (204), Expect = e-110 Identities = 330/372 (88%) Strand = Plus / Plus Query: 1 tcatcggcgccaggttcttcctggcgggctacgaggcgtccaagggccccgtggacacgt 60 |||||||||| ||||||||| || | || ||||||||| | ||||||||||| ||||||| Sbjct: 551 tcatcggcgcgaggttcttcttgaccgggtacgaggcggcgaagggccccgtcgacacgt 610 Query: 61 ccaaggagtcgcgctcgcccagggacaacgacggccacggcacgcacacctcgagcacgg 120 ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 611 ccaaggagtcgcggtcgccgagggacaacgacgggcacggcacgcacacctccagcacgg 670 Query: 121 cggcgggctccgccatgcacggcgctgacctgctgggctacgcgtcagggacggccaagg 180 ||||||| |||||| ||| |||||| |||||||| || ||||| | ||||||||||||| Sbjct: 671 cggcgggatccgccgtgcgcggcgccgacctgctcgggtacgccgccgggacggccaagg 730 Query: 181 gcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttca 240 |||||||||| | ||||||||| || ||||||||||| |||||||||||||| ||||||| Sbjct: 731 gcatggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttca 790 Query: 241 gctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccc 300 |||||||||||||||||| ||||||||| || || ||||||||| ||||||||||| | Sbjct: 791 gctccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgc 850 Query: 301 tctccctcggcggtggcacgtctgactactaccgcgacagcatcgccgtgggcgcgtaca 360 |||| |||||||| ||||| | ||||||||||||||||||||||| |||||||| |||| Sbjct: 851 tctcgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttaca 910 Query: 361 gcgccatggaaa 372 |||||||||||| Sbjct: 911 gcgccatggaaa 922
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 404 bits (204), Expect = e-110 Identities = 330/372 (88%) Strand = Plus / Minus Query: 1 tcatcggcgccaggttcttcctggcgggctacgaggcgtccaagggccccgtggacacgt 60 |||||||||| ||||||||| || | || ||||||||| | ||||||||||| ||||||| Sbjct: 31186120 tcatcggcgcgaggttcttcttgaccgggtacgaggcggcgaagggccccgtcgacacgt 31186061 Query: 61 ccaaggagtcgcgctcgcccagggacaacgacggccacggcacgcacacctcgagcacgg 120 ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 31186060 ccaaggagtcgcggtcgccgagggacaacgacgggcacggcacgcacacctccagcacgg 31186001 Query: 121 cggcgggctccgccatgcacggcgctgacctgctgggctacgcgtcagggacggccaagg 180 ||||||| |||||| ||| |||||| |||||||| || ||||| | ||||||||||||| Sbjct: 31186000 cggcgggatccgccgtgcgcggcgccgacctgctcgggtacgccgccgggacggccaagg 31185941 Query: 181 gcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttca 240 |||||||||| | ||||||||| || ||||||||||| |||||||||||||| ||||||| Sbjct: 31185940 gcatggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttca 31185881 Query: 241 gctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccc 300 |||||||||||||||||| ||||||||| || || ||||||||| ||||||||||| | Sbjct: 31185880 gctccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgc 31185821 Query: 301 tctccctcggcggtggcacgtctgactactaccgcgacagcatcgccgtgggcgcgtaca 360 |||| |||||||| ||||| | ||||||||||||||||||||||| |||||||| |||| Sbjct: 31185820 tctcgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttaca 31185761 Query: 361 gcgccatggaaa 372 |||||||||||| Sbjct: 31185760 gcgccatggaaa 31185749 Score = 131 bits (66), Expect = 2e-27 Identities = 207/254 (81%) Strand = Plus / Plus Query: 30 tacgaggcgtccaagggccccgtggacacgtccaaggagtcgcgctcgcccagggacaac 89 ||||||||| | | ||| ||| ||||||| ||| |||||||||||| || | ||| || Sbjct: 22511463 tacgaggcggcgatggggcccatggacaccaccagggagtcgcgctccccgcgcgacgac 22511522 Query: 90 gacggccacggcacgcacacctcgagcacggcggcgggctccgccatgcacggcgctgac 149 ||||| |||||||||||||| ||| |||||| || ||| ||||| | |||||| | Sbjct: 22511523 gacggacacggcacgcacacgtcgtccacggccgccggcgccgccgtctccggcgccagc 22511582 Query: 150 ctgctgggctacgcgtcagggacggccaagggcatggcgccccgcgcgcgcgtggccacg 209 |||||||| | |||||| || ||||| |||||||||||| | |||||||| ||| | Sbjct: 22511583 ctgctggggttcgcgtccggcacggcgcgcggcatggcgcccagggcgcgcgtcgccgtg 22511642 Query: 210 tacaaggtgtgctgggtcggcggctgcttcagctccgacatcctcaagggcatggaggtc 269 ||||||||||||||| ||||||||||||||||||||||||||||| || ||||| | | Sbjct: 22511643 tacaaggtgtgctggctcggcggctgcttcagctccgacatcctcgccgggatggacgcc 22511702 Query: 270 gccgtcgccgacgg 283 |||||||||||||| Sbjct: 22511703 gccgtcgccgacgg 22511716 Score = 87.7 bits (44), Expect = 2e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 210 tacaaggtgtgctgggtcggcggctgcttcagctccgacatcctcaagggcatggaggtc 269 ||||||||||||||| || ||| |||| |||||||||||||||| ||| ||||| | | Sbjct: 2370301 tacaaggtgtgctggttcaacgggtgctacagctccgacatcctcgcggggatggacgac 2370360 Query: 270 gccgtcgccgacggcgttgacgtgctctccctctccctcggcgg 313 ||||| ||||||||| |||||||| ||||||||||||||||| Sbjct: 2370361 gccgtgcgcgacggcgtcgacgtgctgtccctctccctcggcgg 2370404 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 292 tgctctccctctccctcggcggtgg 316 ||||||| ||||||||||||||||| Sbjct: 12762923 tgctctctctctccctcggcggtgg 12762899 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 gcgccccgcgcgcgcgtggccacgtacaaggtgtgc 221 |||||| |||||| ||| |||| ||||||||||||| Sbjct: 17866041 gcgcccggcgcgcacgtcgccatgtacaaggtgtgc 17866076
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 404 bits (204), Expect = e-110 Identities = 330/372 (88%) Strand = Plus / Minus Query: 1 tcatcggcgccaggttcttcctggcgggctacgaggcgtccaagggccccgtggacacgt 60 |||||||||| ||||||||| || | || ||||||||| | ||||||||||| ||||||| Sbjct: 106761 tcatcggcgcgaggttcttcttgaccgggtacgaggcggcgaagggccccgtcgacacgt 106702 Query: 61 ccaaggagtcgcgctcgcccagggacaacgacggccacggcacgcacacctcgagcacgg 120 ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 106701 ccaaggagtcgcggtcgccgagggacaacgacgggcacggcacgcacacctccagcacgg 106642 Query: 121 cggcgggctccgccatgcacggcgctgacctgctgggctacgcgtcagggacggccaagg 180 ||||||| |||||| ||| |||||| |||||||| || ||||| | ||||||||||||| Sbjct: 106641 cggcgggatccgccgtgcgcggcgccgacctgctcgggtacgccgccgggacggccaagg 106582 Query: 181 gcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttca 240 |||||||||| | ||||||||| || ||||||||||| |||||||||||||| ||||||| Sbjct: 106581 gcatggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttca 106522 Query: 241 gctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccc 300 |||||||||||||||||| ||||||||| || || ||||||||| ||||||||||| | Sbjct: 106521 gctccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgc 106462 Query: 301 tctccctcggcggtggcacgtctgactactaccgcgacagcatcgccgtgggcgcgtaca 360 |||| |||||||| ||||| | ||||||||||||||||||||||| |||||||| |||| Sbjct: 106461 tctcgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttaca 106402 Query: 361 gcgccatggaaa 372 |||||||||||| Sbjct: 106401 gcgccatggaaa 106390
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 404 bits (204), Expect = e-110 Identities = 330/372 (88%) Strand = Plus / Minus Query: 1 tcatcggcgccaggttcttcctggcgggctacgaggcgtccaagggccccgtggacacgt 60 |||||||||| ||||||||| || | || ||||||||| | ||||||||||| ||||||| Sbjct: 31276643 tcatcggcgcgaggttcttcttgaccgggtacgaggcggcgaagggccccgtcgacacgt 31276584 Query: 61 ccaaggagtcgcgctcgcccagggacaacgacggccacggcacgcacacctcgagcacgg 120 ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 31276583 ccaaggagtcgcggtcgccgagggacaacgacgggcacggcacgcacacctccagcacgg 31276524 Query: 121 cggcgggctccgccatgcacggcgctgacctgctgggctacgcgtcagggacggccaagg 180 ||||||| |||||| ||| |||||| |||||||| || ||||| | ||||||||||||| Sbjct: 31276523 cggcgggatccgccgtgcgcggcgccgacctgctcgggtacgccgccgggacggccaagg 31276464 Query: 181 gcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttca 240 |||||||||| | ||||||||| || ||||||||||| |||||||||||||| ||||||| Sbjct: 31276463 gcatggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttca 31276404 Query: 241 gctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccc 300 |||||||||||||||||| ||||||||| || || ||||||||| ||||||||||| | Sbjct: 31276403 gctccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgc 31276344 Query: 301 tctccctcggcggtggcacgtctgactactaccgcgacagcatcgccgtgggcgcgtaca 360 |||| |||||||| ||||| | ||||||||||||||||||||||| |||||||| |||| Sbjct: 31276343 tctcgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttaca 31276284 Query: 361 gcgccatggaaa 372 |||||||||||| Sbjct: 31276283 gcgccatggaaa 31276272 Score = 131 bits (66), Expect = 2e-27 Identities = 207/254 (81%) Strand = Plus / Plus Query: 30 tacgaggcgtccaagggccccgtggacacgtccaaggagtcgcgctcgcccagggacaac 89 ||||||||| | | ||| ||| ||||||| ||| |||||||||||| || | ||| || Sbjct: 22504492 tacgaggcggcgatggggcccatggacaccaccagggagtcgcgctccccgcgcgacgac 22504551 Query: 90 gacggccacggcacgcacacctcgagcacggcggcgggctccgccatgcacggcgctgac 149 ||||| |||||||||||||| ||| |||||| || ||| ||||| | |||||| | Sbjct: 22504552 gacggacacggcacgcacacgtcgtccacggccgccggcgccgccgtctccggcgccagc 22504611 Query: 150 ctgctgggctacgcgtcagggacggccaagggcatggcgccccgcgcgcgcgtggccacg 209 |||||||| | |||||| || ||||| |||||||||||| | |||||||| ||| | Sbjct: 22504612 ctgctggggttcgcgtccggcacggcgcgcggcatggcgcccagggcgcgcgtcgccgtg 22504671 Query: 210 tacaaggtgtgctgggtcggcggctgcttcagctccgacatcctcaagggcatggaggtc 269 ||||||||||||||| ||||||||||||||||||||||||||||| || ||||| | | Sbjct: 22504672 tacaaggtgtgctggctcggcggctgcttcagctccgacatcctcgccgggatggacgcc 22504731 Query: 270 gccgtcgccgacgg 283 |||||||||||||| Sbjct: 22504732 gccgtcgccgacgg 22504745 Score = 87.7 bits (44), Expect = 2e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 210 tacaaggtgtgctgggtcggcggctgcttcagctccgacatcctcaagggcatggaggtc 269 ||||||||||||||| || ||| |||| |||||||||||||||| ||| ||||| | | Sbjct: 2370411 tacaaggtgtgctggttcaacgggtgctacagctccgacatcctcgcggggatggacgac 2370470 Query: 270 gccgtcgccgacggcgttgacgtgctctccctctccctcggcgg 313 ||||| ||||||||| |||||||| ||||||||||||||||| Sbjct: 2370471 gccgtgcgcgacggcgtcgacgtgctgtccctctccctcggcgg 2370514 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 292 tgctctccctctccctcggcggtgg 316 ||||||| ||||||||||||||||| Sbjct: 12759686 tgctctctctctccctcggcggtgg 12759662 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 gcgccccgcgcgcgcgtggccacgtacaaggtgtgc 221 |||||| |||||| ||| |||| ||||||||||||| Sbjct: 17859582 gcgcccggcgcgcacgtcgccatgtacaaggtgtgc 17859617
>dbj|AK103255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123P12, full insert sequence Length = 2813 Score = 404 bits (204), Expect = e-110 Identities = 330/372 (88%) Strand = Plus / Plus Query: 1 tcatcggcgccaggttcttcctggcgggctacgaggcgtccaagggccccgtggacacgt 60 |||||||||| ||||||||| || | || ||||||||| | ||||||||||| ||||||| Sbjct: 799 tcatcggcgcgaggttcttcttgaccgggtacgaggcggcgaagggccccgtcgacacgt 858 Query: 61 ccaaggagtcgcgctcgcccagggacaacgacggccacggcacgcacacctcgagcacgg 120 ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 859 ccaaggagtcgcggtcgccgagggacaacgacgggcacggcacgcacacctccagcacgg 918 Query: 121 cggcgggctccgccatgcacggcgctgacctgctgggctacgcgtcagggacggccaagg 180 ||||||| |||||| ||| |||||| |||||||| || ||||| | ||||||||||||| Sbjct: 919 cggcgggatccgccgtgcgcggcgccgacctgctcgggtacgccgccgggacggccaagg 978 Query: 181 gcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttca 240 |||||||||| | ||||||||| || ||||||||||| |||||||||||||| ||||||| Sbjct: 979 gcatggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttca 1038 Query: 241 gctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccc 300 |||||||||||||||||| ||||||||| || || ||||||||| ||||||||||| | Sbjct: 1039 gctccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgc 1098 Query: 301 tctccctcggcggtggcacgtctgactactaccgcgacagcatcgccgtgggcgcgtaca 360 |||| |||||||| ||||| | ||||||||||||||||||||||| |||||||| |||| Sbjct: 1099 tctcgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttaca 1158 Query: 361 gcgccatggaaa 372 |||||||||||| Sbjct: 1159 gcgccatggaaa 1170
>dbj|AK101646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055P14, full insert sequence Length = 2667 Score = 404 bits (204), Expect = e-110 Identities = 330/372 (88%) Strand = Plus / Plus Query: 1 tcatcggcgccaggttcttcctggcgggctacgaggcgtccaagggccccgtggacacgt 60 |||||||||| ||||||||| || | || ||||||||| | ||||||||||| ||||||| Sbjct: 604 tcatcggcgcgaggttcttcttgaccgggtacgaggcggcgaagggccccgtcgacacgt 663 Query: 61 ccaaggagtcgcgctcgcccagggacaacgacggccacggcacgcacacctcgagcacgg 120 ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 664 ccaaggagtcgcggtcgccgagggacaacgacgggcacggcacgcacacctccagcacgg 723 Query: 121 cggcgggctccgccatgcacggcgctgacctgctgggctacgcgtcagggacggccaagg 180 ||||||| |||||| ||| |||||| |||||||| || ||||| | ||||||||||||| Sbjct: 724 cggcgggatccgccgtgcgcggcgccgacctgctcgggtacgccgccgggacggccaagg 783 Query: 181 gcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttca 240 |||||||||| | ||||||||| || ||||||||||| |||||||||||||| ||||||| Sbjct: 784 gcatggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttca 843 Query: 241 gctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccc 300 |||||||||||||||||| ||||||||| || || ||||||||| ||||||||||| | Sbjct: 844 gctccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgc 903 Query: 301 tctccctcggcggtggcacgtctgactactaccgcgacagcatcgccgtgggcgcgtaca 360 |||| |||||||| ||||| | ||||||||||||||||||||||| |||||||| |||| Sbjct: 904 tctcgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttaca 963 Query: 361 gcgccatggaaa 372 |||||||||||| Sbjct: 964 gcgccatggaaa 975
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 131 bits (66), Expect = 2e-27 Identities = 207/254 (81%) Strand = Plus / Minus Query: 30 tacgaggcgtccaagggccccgtggacacgtccaaggagtcgcgctcgcccagggacaac 89 ||||||||| | | ||| ||| ||||||| ||| |||||||||||| || | ||| || Sbjct: 156683 tacgaggcggcgatggggcccatggacaccaccagggagtcgcgctccccgcgcgacgac 156624 Query: 90 gacggccacggcacgcacacctcgagcacggcggcgggctccgccatgcacggcgctgac 149 ||||| |||||||||||||| ||| |||||| || ||| ||||| | |||||| | Sbjct: 156623 gacggacacggcacgcacacgtcgtccacggccgccggcgccgccgtctccggcgccagc 156564 Query: 150 ctgctgggctacgcgtcagggacggccaagggcatggcgccccgcgcgcgcgtggccacg 209 |||||||| | |||||| || ||||| |||||||||||| | |||||||| ||| | Sbjct: 156563 ctgctggggttcgcgtccggcacggcgcgcggcatggcgcccagggcgcgcgtcgccgtg 156504 Query: 210 tacaaggtgtgctgggtcggcggctgcttcagctccgacatcctcaagggcatggaggtc 269 ||||||||||||||| ||||||||||||||||||||||||||||| || ||||| | | Sbjct: 156503 tacaaggtgtgctggctcggcggctgcttcagctccgacatcctcgccgggatggacgcc 156444 Query: 270 gccgtcgccgacgg 283 |||||||||||||| Sbjct: 156443 gccgtcgccgacgg 156430
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 131 bits (66), Expect = 2e-27 Identities = 207/254 (81%) Strand = Plus / Plus Query: 30 tacgaggcgtccaagggccccgtggacacgtccaaggagtcgcgctcgcccagggacaac 89 ||||||||| | | ||| ||| ||||||| ||| |||||||||||| || | ||| || Sbjct: 106710 tacgaggcggcgatggggcccatggacaccaccagggagtcgcgctccccgcgcgacgac 106769 Query: 90 gacggccacggcacgcacacctcgagcacggcggcgggctccgccatgcacggcgctgac 149 ||||| |||||||||||||| ||| |||||| || ||| ||||| | |||||| | Sbjct: 106770 gacggacacggcacgcacacgtcgtccacggccgccggcgccgccgtctccggcgccagc 106829 Query: 150 ctgctgggctacgcgtcagggacggccaagggcatggcgccccgcgcgcgcgtggccacg 209 |||||||| | |||||| || ||||| |||||||||||| | |||||||| ||| | Sbjct: 106830 ctgctggggttcgcgtccggcacggcgcgcggcatggcgcccagggcgcgcgtcgccgtg 106889 Query: 210 tacaaggtgtgctgggtcggcggctgcttcagctccgacatcctcaagggcatggaggtc 269 ||||||||||||||| ||||||||||||||||||||||||||||| || ||||| | | Sbjct: 106890 tacaaggtgtgctggctcggcggctgcttcagctccgacatcctcgccgggatggacgcc 106949 Query: 270 gccgtcgccgacgg 283 |||||||||||||| Sbjct: 106950 gccgtcgccgacgg 106963
>dbj|AK105749.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B09, full insert sequence Length = 2517 Score = 131 bits (66), Expect = 2e-27 Identities = 207/254 (81%) Strand = Plus / Plus Query: 30 tacgaggcgtccaagggccccgtggacacgtccaaggagtcgcgctcgcccagggacaac 89 ||||||||| | | ||| ||| ||||||| ||| |||||||||||| || | ||| || Sbjct: 596 tacgaggcggcgatggggcccatggacaccaccagggagtcgcgctccccgcgcgacgac 655 Query: 90 gacggccacggcacgcacacctcgagcacggcggcgggctccgccatgcacggcgctgac 149 ||||| |||||||||||||| ||| |||||| || ||| ||||| | |||||| | Sbjct: 656 gacggacacggcacgcacacgtcgtccacggccgccggcgccgccgtctccggcgccagc 715 Query: 150 ctgctgggctacgcgtcagggacggccaagggcatggcgccccgcgcgcgcgtggccacg 209 |||||||| | |||||| || ||||| |||||||||||| | |||||||| ||| | Sbjct: 716 ctgctggggttcgcgtccggcacggcgcgcggcatggcgcccagggcgcgcgtcgccgtg 775 Query: 210 tacaaggtgtgctgggtcggcggctgcttcagctccgacatcctcaagggcatggaggtc 269 ||||||||||||||| ||||||||||||||||||||||||||||| || ||||| | | Sbjct: 776 tacaaggtgtgctggctcggcggctgcttcagctccgacatcctcgccgggatggacgcc 835 Query: 270 gccgtcgccgacgg 283 |||||||||||||| Sbjct: 836 gccgtcgccgacgg 849
>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24, complete sequence Length = 150503 Score = 87.7 bits (44), Expect = 2e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 210 tacaaggtgtgctgggtcggcggctgcttcagctccgacatcctcaagggcatggaggtc 269 ||||||||||||||| || ||| |||| |||||||||||||||| ||| ||||| | | Sbjct: 87143 tacaaggtgtgctggttcaacgggtgctacagctccgacatcctcgcggggatggacgac 87202 Query: 270 gccgtcgccgacggcgttgacgtgctctccctctccctcggcgg 313 ||||| ||||||||| |||||||| ||||||||||||||||| Sbjct: 87203 gccgtgcgcgacggcgtcgacgtgctgtccctctccctcggcgg 87246
>gb|BT024067.1| Zea mays clone EL01N0448C11 mRNA sequence Length = 2351 Score = 85.7 bits (43), Expect = 9e-14 Identities = 118/143 (82%) Strand = Plus / Plus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttc 239 ||||||||||||||||| ||||| || ||||||||||||||||| || ||||||||| Sbjct: 541 ggcatggcgccccgcgcccgcgtcgcggcgtacaaggtgtgctggacggggggctgcttc 600 Query: 240 agctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctcc 299 |||||||||||||| || | | || ||| || || |||||||| |||||||||||| Sbjct: 601 agctccgacatcctggcggccgtcgaccgcgcagtggcggacggcgtcgacgtgctctcc 660 Query: 300 ctctccctcggcggtggcacgtc 322 |||| |||||||| ||| |||| Sbjct: 661 atctcgctcggcggcggctcgtc 683 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 gacggccacggcacgcacacc 110 ||||||||||||||||||||| Sbjct: 451 gacggccacggcacgcacacc 471
>ref|XM_473575.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2331 Score = 83.8 bits (42), Expect = 4e-13 Identities = 114/138 (82%) Strand = Plus / Plus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttc 239 ||||||||||||||||| ||||| || | |||||||||||||||| || || |||||| Sbjct: 757 ggcatggcgccccgcgcccgcgtcgcggcctacaaggtgtgctgggcgggagggtgcttc 816 Query: 240 agctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctcc 299 |||||||||||||| || | | || |||||| | |||||||| |||||||||||| Sbjct: 817 agctccgacatcctggcggccgtcgatcgcgccgtgtcggacggcgtcgacgtgctctcc 876 Query: 300 ctctccctcggcggtggc 317 |||||||||| |||||| Sbjct: 877 atctccctcgggggtggc 894
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 83.8 bits (42), Expect = 4e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttc 239 ||||||||||||||||| ||||| || | |||||||||||||||| || || |||||| Sbjct: 28853826 ggcatggcgccccgcgcccgcgtcgcggcctacaaggtgtgctgggcgggagggtgcttc 28853767 Query: 240 agctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctcc 299 |||||||||||||| || | | || |||||| | |||||||| |||||||||||| Sbjct: 28853766 agctccgacatcctggcggccgtcgatcgcgccgtgtcggacggcgtcgacgtgctctcc 28853707 Query: 300 ctctccctcggcggtggc 317 |||||||||| |||||| Sbjct: 28853706 atctccctcgggggtggc 28853689 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Minus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgc 221 ||||||||||||||||||| | |||| | |||| |||||||| Sbjct: 5563185 ggcatggcgccccgcgcgcacctggcgatgtacgaggtgtgc 5563144 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 82 gggacaacgacggccacggcacgcacacctcgagcacggcggcgggctccgcc 134 ||||| || ||||||||||| ||||||| ||| |||||||||||| ||||| Sbjct: 21367932 gggactactacggccacggctcgcacacgtcgtcgacggcggcgggcgccgcc 21367984 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 96 cacggcacgcacacctcgagcacggcggcggg 127 |||||||| ||||| |||||||||||||||| Sbjct: 27976555 cacggcacccacacggcgagcacggcggcggg 27976524 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 cgacggcgttgacgtgctctccctctcc 305 ||||||||| |||||||||||| ||||| Sbjct: 5563084 cgacggcgtcgacgtgctctccatctcc 5563057
>dbj|AK110251.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-H04, full insert sequence Length = 3493 Score = 83.8 bits (42), Expect = 4e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttc 239 ||||||||||||||||| ||||| || | |||||||||||||||| || || |||||| Sbjct: 2469 ggcatggcgccccgcgcccgcgtcgcggcctacaaggtgtgctgggcgggagggtgcttc 2410 Query: 240 agctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctcc 299 |||||||||||||| || | | || |||||| | |||||||| |||||||||||| Sbjct: 2409 agctccgacatcctggcggccgtcgatcgcgccgtgtcggacggcgtcgacgtgctctcc 2350 Query: 300 ctctccctcggcggtggc 317 |||||||||| |||||| Sbjct: 2349 atctccctcgggggtggc 2332
>dbj|AK110034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-B01, full insert sequence Length = 3486 Score = 83.8 bits (42), Expect = 4e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttc 239 ||||||||||||||||| ||||| || | |||||||||||||||| || || |||||| Sbjct: 1726 ggcatggcgccccgcgcccgcgtcgcggcctacaaggtgtgctgggcgggagggtgcttc 1667 Query: 240 agctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctcc 299 |||||||||||||| || | | || |||||| | |||||||| |||||||||||| Sbjct: 1666 agctccgacatcctggcggccgtcgatcgcgccgtgtcggacggcgtcgacgtgctctcc 1607 Query: 300 ctctccctcggcggtggc 317 |||||||||| |||||| Sbjct: 1606 atctccctcgggggtggc 1589
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 83.8 bits (42), Expect = 4e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttc 239 ||||||||||||||||| ||||| || | |||||||||||||||| || || |||||| Sbjct: 65888 ggcatggcgccccgcgcccgcgtcgcggcctacaaggtgtgctgggcgggagggtgcttc 65829 Query: 240 agctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctcc 299 |||||||||||||| || | | || |||||| | |||||||| |||||||||||| Sbjct: 65828 agctccgacatcctggcggccgtcgatcgcgccgtgtcggacggcgtcgacgtgctctcc 65769 Query: 300 ctctccctcggcggtggc 317 |||||||||| |||||| Sbjct: 65768 atctccctcgggggtggc 65751
>ref|XM_482712.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2391 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 208 cgtacaaggtgtgctgggtcggcggctgcttcagctccgacatcct 253 ||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 785 cgtacaaggtgtgctgggtgggcggctgcttcgactccgacatcct 830
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 208 cgtacaaggtgtgctgggtcggcggctgcttcagctccgacatcct 253 ||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 22104687 cgtacaaggtgtgctgggtgggcggctgcttcgactccgacatcct 22104732 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gtgctctccctctccctcgg 310 |||||||||||||||||||| Sbjct: 11588650 gtgctctccctctccctcgg 11588669
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 208 cgtacaaggtgtgctgggtcggcggctgcttcagctccgacatcct 253 ||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 67650 cgtacaaggtgtgctgggtgggcggctgcttcgactccgacatcct 67695
>ref|NM_196315.1| Oryza sativa (japonica cultivar-group) putative cucumisin-like serine protease (OSJNBa0011L09.20), mRNA Length = 2322 Score = 61.9 bits (31), Expect = 1e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 183 atggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagc 242 ||||||||| | |||||||| ||| ||||||||||||||||| | || ||| || || Sbjct: 748 atggcgcccggggcgcgcgtcgccgcgtacaaggtgtgctggccggaggggtgcctcggc 807 Query: 243 tccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctc 302 |||||||| ||| ||||| || | ||||| |||||||| || | |||||||||||| Sbjct: 808 tccgacattctcgccggcattgacgctgccgtggccgacggggtcggcgtgctctccctg 867 Query: 303 tccctcggcgg 313 ||||||||||| Sbjct: 868 tccctcggcgg 878
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 61.9 bits (31), Expect = 1e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 183 atggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagc 242 ||||||||| | |||||||| ||| ||||||||||||||||| | || ||| || || Sbjct: 117724 atggcgcccggggcgcgcgtcgccgcgtacaaggtgtgctggccggaggggtgcctcggc 117665 Query: 243 tccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctc 302 |||||||| ||| ||||| || | ||||| |||||||| || | |||||||||||| Sbjct: 117664 tccgacattctcgccggcattgacgctgccgtggccgacggggtcggcgtgctctccctg 117605 Query: 303 tccctcggcgg 313 ||||||||||| Sbjct: 117604 tccctcggcgg 117594
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 61.9 bits (31), Expect = 1e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 183 atggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagc 242 ||||||||| | |||||||| ||| ||||||||||||||||| | || ||| || || Sbjct: 12645838 atggcgcccggggcgcgcgtcgccgcgtacaaggtgtgctggccggaggggtgcctcggc 12645897 Query: 243 tccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctc 302 |||||||| ||| ||||| || | ||||| |||||||| || | |||||||||||| Sbjct: 12645898 tccgacattctcgccggcattgacgctgccgtggccgacggggtcggcgtgctctccctg 12645957 Query: 303 tccctcggcgg 313 ||||||||||| Sbjct: 12645958 tccctcggcgg 12645968
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 61.9 bits (31), Expect = 1e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 183 atggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagc 242 ||||||||| | |||||||| ||| ||||||||||||||||| | || ||| || || Sbjct: 12653178 atggcgcccggggcgcgcgtcgccgcgtacaaggtgtgctggccggaggggtgcctcggc 12653237 Query: 243 tccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctc 302 |||||||| ||| ||||| || | ||||| |||||||| || | |||||||||||| Sbjct: 12653238 tccgacattctcgccggcattgacgctgccgtggccgacggggtcggcgtgctctccctg 12653297 Query: 303 tccctcggcgg 313 ||||||||||| Sbjct: 12653298 tccctcggcgg 12653308
>gb|AY107161.1| Zea mays PCO101731 mRNA sequence Length = 1572 Score = 60.0 bits (30), Expect = 5e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 232 gctgcttcagctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacg 291 |||||||||||||||||||||| || | | || |||||| || |||||||| |||| Sbjct: 38 gctgcttcagctccgacatcctggcggccgtcgaccgcgccgtggcggacggcgtcgacg 97 Query: 292 tgctctccctctccctcggcggtggcacgtctgactactaccgcgacagc 341 |||||||| |||| |||||||| ||| |||| ||||| |||||||||| Sbjct: 98 tgctctccatctcgctcggcggcggctcgtccccctacttccgcgacagc 147
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 269 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 312 |||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 34306 cgccgtcgccgacggcgtcgacgtcatctccgtctccctcggcg 34263
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 96 cacggcacgcacacctcgagcacggcgg 123 |||||||||||||||||||||||||||| Sbjct: 27037778 cacggcacgcacacctcgagcacggcgg 27037805 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 gacaacgacggccacggcacgcacac 109 |||| ||||||||||||||||||||| Sbjct: 5532365 gacaccgacggccacggcacgcacac 5532340 Score = 40.1 bits (20), Expect = 5.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 269 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 312 |||||| | ||| ||||| |||||||||||| |||| ||||||| Sbjct: 27037954 cgccgtggacgagggcgtcgacgtgctctccatctcgctcggcg 27037997 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 278 cgacggcgttgacgtgctctccctctccctcggcgg 313 ||||||||| |||| |||||| ||||||||||||| Sbjct: 5532159 cgacggcgtccacgtcctctccgtctccctcggcgg 5532124
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 96 cacggcacgcacacctcgagcacggcgg 123 |||||||||||||||||||||||||||| Sbjct: 9427 cacggcacgcacacctcgagcacggcgg 9454 Score = 40.1 bits (20), Expect = 5.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 269 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 312 |||||| | ||| ||||| |||||||||||| |||| ||||||| Sbjct: 9603 cgccgtggacgagggcgtcgacgtgctctccatctcgctcggcg 9646
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 96 cacggcacgcacacctcgagcacggcgg 123 |||||||||||||||||||||||||||| Sbjct: 90980 cacggcacgcacacctcgagcacggcgg 91007 Score = 40.1 bits (20), Expect = 5.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 269 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 312 |||||| | ||| ||||| |||||||||||| |||| ||||||| Sbjct: 91156 cgccgtggacgagggcgtcgacgtgctctccatctcgctcggcg 91199
>dbj|AK106911.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-A07, full insert sequence Length = 1659 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 269 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 312 |||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 52 cgccgtcgccgacggcgtcgacgtcatctccgtctccctcggcg 95
>dbj|AK100551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103I17, full insert sequence Length = 2893 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 96 cacggcacgcacacctcgagcacggcgg 123 |||||||||||||||||||||||||||| Sbjct: 847 cacggcacgcacacctcgagcacggcgg 874 Score = 40.1 bits (20), Expect = 5.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 269 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 312 |||||| | ||| ||||| |||||||||||| |||| ||||||| Sbjct: 1023 cgccgtggacgagggcgtcgacgtgctctccatctcgctcggcg 1066
>dbj|AK072929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148I21, full insert sequence Length = 3195 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 96 cacggcacgcacacctcgagcacggcgg 123 |||||||||||||||||||||||||||| Sbjct: 762 cacggcacgcacacctcgagcacggcgg 789 Score = 40.1 bits (20), Expect = 5.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 269 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 312 |||||| | ||| ||||| |||||||||||| |||| ||||||| Sbjct: 938 cgccgtggacgagggcgtcgacgtgctctccatctcgctcggcg 981
>dbj|AB037371.1| Oryza sativa (japonica cultivar-group) rsp1 mRNA for subtilisin-like serine protease, complete cds Length = 3026 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 96 cacggcacgcacacctcgagcacggcgg 123 |||||||||||||||||||||||||||| Sbjct: 931 cacggcacgcacacctcgagcacggcgg 958 Score = 40.1 bits (20), Expect = 5.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 269 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 312 |||||| | ||| ||||| |||||||||||| |||| ||||||| Sbjct: 1107 cgccgtggacgagggcgtcgacgtgctctccatctcgctcggcg 1150
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 79 ccagggacaacgacggccacggcacgcacac 109 ||||||||| ||||||||||||||||||||| Sbjct: 18365305 ccagggacaccgacggccacggcacgcacac 18365335 Score = 54.0 bits (27), Expect = 3e-04 Identities = 120/151 (79%) Strand = Plus / Plus Query: 74 ctcgcccagggacaacgacggccacggcacgcacacctcgagcacggcggcgggctccgc 133 |||||| |||||| ||||||| |||||||||||||| || |||||||| ||| ||| Sbjct: 16302712 ctcgccgagggaccacgacggtcacggcacgcacacggcgtcgacggcggccggcgccgt 16302771 Query: 134 catgcacggcgctgacctgctgggctacgcgtcagggacggccaagggcatggcgccccg 193 | || || ||| | || || ||||||||| ||| |||||| |||||||||||| | Sbjct: 16302772 cgtggccgacgcgggactcctcggctacgcggaaggcacggcccgcggcatggcgcccgg 16302831 Query: 194 cgcgcgcgtggccacgtacaaggtgtgctgg 224 |||||||| || ||||||||||||||||| Sbjct: 16302832 tgcgcgcgtcgcggcgtacaaggtgtgctgg 16302862 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 278 cgacggcgttgacgtgctctccctctccctcggcgg 313 ||||||||| |||||||||||| | || |||||||| Sbjct: 18365516 cgacggcgtggacgtgctctccgtgtcgctcggcgg 18365551
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 79 ccagggacaacgacggccacggcacgcacac 109 ||||||||| ||||||||||||||||||||| Sbjct: 80041 ccagggacaccgacggccacggcacgcacac 80071 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 278 cgacggcgttgacgtgctctccctctccctcggcgg 313 ||||||||| |||||||||||| | || |||||||| Sbjct: 80252 cgacggcgtggacgtgctctccgtgtcgctcggcgg 80287
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 79 ccagggacaacgacggccacggcacgcacac 109 ||||||||| ||||||||||||||||||||| Sbjct: 27179 ccagggacaccgacggccacggcacgcacac 27209 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 278 cgacggcgttgacgtgctctccctctccctcggcgg 313 ||||||||| |||||||||||| | || |||||||| Sbjct: 27390 cgacggcgtggacgtgctctccgtgtcgctcggcgg 27425
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 54.0 bits (27), Expect = 3e-04 Identities = 120/151 (79%) Strand = Plus / Plus Query: 74 ctcgcccagggacaacgacggccacggcacgcacacctcgagcacggcggcgggctccgc 133 |||||| |||||| ||||||| |||||||||||||| || |||||||| ||| ||| Sbjct: 119228 ctcgccgagggaccacgacggtcacggcacgcacacggcgtcgacggcggccggcgccgt 119287 Query: 134 catgcacggcgctgacctgctgggctacgcgtcagggacggccaagggcatggcgccccg 193 | || || ||| | || || ||||||||| ||| |||||| |||||||||||| | Sbjct: 119288 cgtggccgacgcgggactcctcggctacgcggaaggcacggcccgcggcatggcgcccgg 119347 Query: 194 cgcgcgcgtggccacgtacaaggtgtgctgg 224 |||||||| || ||||||||||||||||| Sbjct: 119348 tgcgcgcgtcgcggcgtacaaggtgtgctgg 119378
>ref|XM_475298.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2286 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 274 tcgccgacggcgttgacgtgctctccctctccct 307 ||||||||||||| ||||| |||||||||||||| Sbjct: 830 tcgccgacggcgtcgacgtcctctccctctccct 863 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 84 gacaacgacggccacggcacgcacacctcgagcacggcggcgggctc 130 |||| |||||| |||||||||||||| ||| |||||| |||||||| Sbjct: 640 gacaccgacgggcacggcacgcacacgtcgtccacggccgcgggctc 686 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaagg 216 ||||||||||||||||| | ||||||| |||||||| Sbjct: 736 ggcatggcgccccgcgccagggtggccatgtacaagg 772
>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0088F07, complete sequence Length = 139180 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 274 tcgccgacggcgttgacgtgctctccctctccct 307 ||||||||||||| ||||| |||||||||||||| Sbjct: 63952 tcgccgacggcgtcgacgtcctctccctctccct 63919 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 84 gacaacgacggccacggcacgcacacctcgagcacggcggcgggctc 130 |||| |||||| |||||||||||||| ||| |||||| |||||||| Sbjct: 64142 gacaccgacgggcacggcacgcacacgtcgtccacggccgcgggctc 64096 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaagg 216 ||||||||||||||||| | ||||||| |||||||| Sbjct: 64046 ggcatggcgccccgcgccagggtggccatgtacaagg 64010
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 274 tcgccgacggcgttgacgtgctctccctctccct 307 ||||||||||||| ||||| |||||||||||||| Sbjct: 21183169 tcgccgacggcgtcgacgtcctctccctctccct 21183136 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 84 gacaacgacggccacggcacgcacacctcgagcacggcggcgggctc 130 |||| |||||| |||||||||||||| ||| |||||| |||||||| Sbjct: 21183359 gacaccgacgggcacggcacgcacacgtcgtccacggccgcgggctc 21183313 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaagg 216 ||||||||||||||||| | ||||||| |||||||| Sbjct: 21183263 ggcatggcgccccgcgccagggtggccatgtacaagg 21183227
>dbj|AK067138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096L15, full insert sequence Length = 2549 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 274 tcgccgacggcgttgacgtgctctccctctccct 307 ||||||||||||| ||||| |||||||||||||| Sbjct: 883 tcgccgacggcgtcgacgtcctctccctctccct 916 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 84 gacaacgacggccacggcacgcacacctcgagcacggcggcgggctc 130 |||| |||||| |||||||||||||| ||| |||||| |||||||| Sbjct: 693 gacaccgacgggcacggcacgcacacgtcgtccacggccgcgggctc 739 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaagg 216 ||||||||||||||||| | ||||||| |||||||| Sbjct: 789 ggcatggcgccccgcgccagggtggccatgtacaagg 825
>ref|NM_190776.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2283 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 90 gacggccacggcacgcacacctcg 113 |||||||||||||||||||||||| Sbjct: 634 gacggccacggcacgcacacctcg 657
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 90 gacggccacggcacgcacacctcg 113 |||||||||||||||||||||||| Sbjct: 37645776 gacggccacggcacgcacacctcg 37645799 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 88 acgacggccacggcacgcacacc 110 ||||||||||||||||||||||| Sbjct: 30339657 acgacggccacggcacgcacacc 30339635 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 91 acggccacggcacgcacacctcgagcacggcggcgggctccg 132 ||||||||||||||||||| || ||| ||||||||||||| Sbjct: 33663502 acggccacggcacgcacacggcgtccaccgcggcgggctccg 33663543 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 91 acggccacggcacgcacacctcgagcacggcggcgggctccg 132 ||||||||||||||||||| || ||| ||||||||||||| Sbjct: 33654204 acggccacggcacgcacacggcgtccaccgcggcgggctccg 33654245
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 90 gacggccacggcacgcacacctcg 113 |||||||||||||||||||||||| Sbjct: 106250 gacggccacggcacgcacacctcg 106273
>dbj|AK099470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023O14, full insert sequence Length = 2549 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 90 gacggccacggcacgcacacctcg 113 |||||||||||||||||||||||| Sbjct: 685 gacggccacggcacgcacacctcg 708
>dbj|AK099469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023O13, full insert sequence Length = 2549 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 90 gacggccacggcacgcacacctcg 113 |||||||||||||||||||||||| Sbjct: 685 gacggccacggcacgcacacctcg 708
>ref|NM_191858.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2337 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 acgacggccacggcacgcacacc 110 ||||||||||||||||||||||| Sbjct: 656 acgacggccacggcacgcacacc 678
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 88 acgacggccacggcacgcacacc 110 ||||||||||||||||||||||| Sbjct: 127976 acgacggccacggcacgcacacc 127954
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 88 acgacggccacggcacgcacacc 110 ||||||||||||||||||||||| Sbjct: 25384 acgacggccacggcacgcacacc 25362
>ref|XM_474683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2277 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgc 221 ||||||||||||||||||| | |||| | |||| |||||||| Sbjct: 724 ggcatggcgccccgcgcgcacctggcgatgtacgaggtgtgc 765 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 cgacggcgttgacgtgctctccctctcc 305 ||||||||| |||||||||||| ||||| Sbjct: 825 cgacggcgtcgacgtgctctccatctcc 852
>ref|XM_464493.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2610 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 gacaacgacggccacggcacgcacac 109 |||| ||||||||||||||||||||| Sbjct: 753 gacaccgacggccacggcacgcacac 778 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 278 cgacggcgttgacgtgctctccctctccctcggcgg 313 ||||||||| |||| |||||| ||||||||||||| Sbjct: 959 cgacggcgtccacgtcctctccgtctccctcggcgg 994
>ref|NM_190888.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2214 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 91 acggccacggcacgcacacctcgagcacggcggcgggctccg 132 ||||||||||||||||||| || ||| ||||||||||||| Sbjct: 632 acggccacggcacgcacacggcgtccaccgcggcgggctccg 673
>ref|NM_190890.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2043 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 91 acggccacggcacgcacacctcgagcacggcggcgggctccg 132 ||||||||||||||||||| || ||| ||||||||||||| Sbjct: 464 acggccacggcacgcacacggcgtccaccgcggcgggctccg 505
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 caagggcatggcgccccgcgcg 197 |||||||||||||||||||||| Sbjct: 1791018 caagggcatggcgccccgcgcg 1791039
>gb|AF200467.1|AF200467 Oryza sativa subtilase mRNA, complete cds Length = 2545 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 91 acggccacggcacgcacacctcgagcacggcggcgggctccg 132 ||||||||||||||||||| || ||| ||||||||||||| Sbjct: 636 acggccacggcacgcacacggcgtccaccgcggcgggctccg 677
>dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699H05 Length = 144850 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 91 acggccacggcacgcacacctcgagcacggcggcgggctccg 132 ||||||||||||||||||| || ||| ||||||||||||| Sbjct: 16572 acggccacggcacgcacacggcgtccaccgcggcgggctccg 16613 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 91 acggccacggcacgcacacctcgagcacggcggcgggctccg 132 ||||||||||||||||||| || ||| ||||||||||||| Sbjct: 7274 acggccacggcacgcacacggcgtccaccgcggcgggctccg 7315
>dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C02 Length = 80086 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 91 acggccacggcacgcacacctcgagcacggcggcgggctccg 132 ||||||||||||||||||| || ||| ||||||||||||| Sbjct: 78374 acggccacggcacgcacacggcgtccaccgcggcgggctccg 78415 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 91 acggccacggcacgcacacctcgagcacggcggcgggctccg 132 ||||||||||||||||||| || ||| ||||||||||||| Sbjct: 69076 acggccacggcacgcacacggcgtccaccgcggcgggctccg 69117
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 gacaacgacggccacggcacgcacac 109 |||| ||||||||||||||||||||| Sbjct: 77100 gacaccgacggccacggcacgcacac 77075 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 278 cgacggcgttgacgtgctctccctctccctcggcgg 313 ||||||||| |||| |||||| ||||||||||||| Sbjct: 76894 cgacggcgtccacgtcctctccgtctccctcggcgg 76859
>dbj|AK120287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050B17, full insert sequence Length = 2614 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 gacaacgacggccacggcacgcacac 109 |||| ||||||||||||||||||||| Sbjct: 754 gacaccgacggccacggcacgcacac 779 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 278 cgacggcgttgacgtgctctccctctccctcggcgg 313 ||||||||| |||| |||||| ||||||||||||| Sbjct: 960 cgacggcgtccacgtcctctccgtctccctcggcgg 995
>dbj|AK109067.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-F11, full insert sequence Length = 1572 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 91 acggccacggcacgcacacctcgagcacggcggcgggctccg 132 ||||||||||||||||||| || ||| ||||||||||||| Sbjct: 1066 acggccacggcacgcacacggcgtccaccgcggcgggctccg 1107
>dbj|AK106644.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E09, full insert sequence Length = 2875 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Minus Query: 91 acggccacggcacgcacacctcgagcacggcggcgggctccg 132 ||||||||||||||||||| || ||| ||||||||||||| Sbjct: 2151 acggccacggcacgcacacggcgtccaccgcggcgggctccg 2110
>dbj|AK063520.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H07, full insert sequence Length = 2462 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 91 acggccacggcacgcacacctcgagcacggcggcgggctccg 132 ||||||||||||||||||| || ||| ||||||||||||| Sbjct: 647 acggccacggcacgcacacggcgtccaccgcggcgggctccg 688
>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01, complete sequence Length = 162227 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Minus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgc 221 ||||||||||||||||||| | |||| | |||| |||||||| Sbjct: 20392 ggcatggcgccccgcgcgcacctggcgatgtacgaggtgtgc 20351 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 cgacggcgttgacgtgctctccctctcc 305 ||||||||| |||||||||||| ||||| Sbjct: 20291 cgacggcgtcgacgtgctctccatctcc 20264
>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01, complete sequence Length = 150283 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Minus Query: 180 ggcatggcgccccgcgcgcgcgtggccacgtacaaggtgtgc 221 ||||||||||||||||||| | |||| | |||| |||||||| Sbjct: 117815 ggcatggcgccccgcgcgcacctggcgatgtacgaggtgtgc 117774 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 cgacggcgttgacgtgctctccctctcc 305 ||||||||| |||||||||||| ||||| Sbjct: 117714 cgacggcgtcgacgtgctctccatctcc 117687
>ref|XM_479590.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2337 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 ggcgttgacgtgctctccctctccctcgg 310 ||||| |||||||||||| |||||||||| Sbjct: 826 ggcgtcgacgtgctctccatctccctcgg 854
>ref|XM_472541.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2331 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 82 gggacaacgacggccacggcacgcacacctcgagcacggcggcgggctccgcc 134 ||||| || ||||||||||| ||||||| ||| |||||||||||| ||||| Sbjct: 629 gggactactacggccacggctcgcacacgtcgtcgacggcggcgggcgccgcc 681
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06, complete sequence Length = 132243 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 292 tgctctccctctccctcggcggtgg 316 ||||||| ||||||||||||||||| Sbjct: 1139 tgctctctctctccctcggcggtgg 1115
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 82 gggacaacgacggccacggcacgcacacctcgagcacggcggcgggctccgcc 134 ||||| || ||||||||||| ||||||| ||| |||||||||||| ||||| Sbjct: 17682 gggactactacggccacggctcgcacacgtcgtcgacggcggcgggcgccgcc 17734
>gb|AC144765.19| Medicago truncatula clone mth2-35o11, complete sequence Length = 130836 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 acgacggccacggcacgcacacctc 112 |||||||||||||||| |||||||| Sbjct: 58030 acgacggccacggcactcacacctc 58006
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 ccccgcgcgcgcgtggccacg 209 ||||||||||||||||||||| Sbjct: 267166 ccccgcgcgcgcgtggccacg 267186
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 tggaggtcgccgtcgccgacg 282 ||||||||||||||||||||| Sbjct: 3334772 tggaggtcgccgtcgccgacg 3334792
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 acctcgagcacggcggcgggc 128 ||||||||||||||||||||| Sbjct: 25628822 acctcgagcacggcggcgggc 25628842 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gtgctctccctctccctcgg 310 |||||||||||||||||||| Sbjct: 8841905 gtgctctccctctccctcgg 8841924
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 ggcgttgacgtgctctccctctccctcgg 310 ||||| |||||||||||| |||||||||| Sbjct: 29077558 ggcgtcgacgtgctctccatctccctcgg 29077586 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gtcgccgtcgccgacggcgt 286 |||||||||||||||||||| Sbjct: 24661117 gtcgccgtcgccgacggcgt 24661136
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 ggcgccccgcgcgcgcgtggc 205 ||||||||||||||||||||| Sbjct: 7978410 ggcgccccgcgcgcgcgtggc 7978430
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 292 tgctctccctctccctcggcggtgg 316 ||||||| ||||||||||||||||| Sbjct: 117376 tgctctctctctccctcggcggtgg 117352
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 ggcgccccgcgcgcgcgtggc 205 ||||||||||||||||||||| Sbjct: 85928 ggcgccccgcgcgcgcgtggc 85948
>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592E11 Length = 153734 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 ggcgccccgcgcgcgcgtggc 205 ||||||||||||||||||||| Sbjct: 2179 ggcgccccgcgcgcgcgtggc 2199
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 ggcgttgacgtgctctccctctccctcgg 310 ||||| |||||||||||| |||||||||| Sbjct: 12676 ggcgtcgacgtgctctccatctccctcgg 12704
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1200_C08 Length = 106214 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 ggcgttgacgtgctctccctctccctcgg 310 ||||| |||||||||||| |||||||||| Sbjct: 25515 ggcgtcgacgtgctctccatctccctcgg 25543
>dbj|AK119348.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-E09, full insert sequence Length = 2601 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 ggcgttgacgtgctctccctctccctcgg 310 ||||| |||||||||||| |||||||||| Sbjct: 864 ggcgtcgacgtgctctccatctccctcgg 892
>dbj|AK105112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G01, full insert sequence Length = 2571 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 82 gggacaacgacggccacggcacgcacacctcgagcacggcggcgggctccgcc 134 ||||| || ||||||||||| ||||||| ||| |||||||||||| ||||| Sbjct: 643 gggactactacggccacggctcgcacacgtcgtcgacggcggcgggcgccgcc 695
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 acctcgagcacggcggcgggc 128 ||||||||||||||||||||| Sbjct: 25556998 acctcgagcacggcggcgggc 25557018 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gtgctctccctctccctcgg 310 |||||||||||||||||||| Sbjct: 8841788 gtgctctccctctccctcgg 8841807
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 acctcgagcacggcggcgggc 128 ||||||||||||||||||||| Sbjct: 44896 acctcgagcacggcggcgggc 44876
>ref|XM_481329.1| Oryza sativa (japonica cultivar-group), mRNA Length = 267 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gtgctctccctctccctcgg 310 |||||||||||||||||||| Sbjct: 32 gtgctctccctctccctcgg 13
>ref|XM_479078.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1578 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gtcgccgtcgccgacggcgt 286 |||||||||||||||||||| Sbjct: 871 gtcgccgtcgccgacggcgt 890
>ref|XM_473476.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2283 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 96 cacggcacgcacacctcgagcacggcggcggg 127 |||||||| ||||| |||||||||||||||| Sbjct: 637 cacggcacccacacggcgagcacggcggcggg 668
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 caagggcatggcgccccgcgcgcg 199 ||||| |||||||||||||||||| Sbjct: 1065915 caaggccatggcgccccgcgcgcg 1065938 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 caagggcatggcgccccgcgcgcg 199 ||||| |||||||||||||||||| Sbjct: 944159 caaggccatggcgccccgcgcgcg 944136
>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete sequence Length = 115815 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 186 gcgccccgcgcgcgcgtggccacgtacaaggtgtgc 221 |||||| |||||| ||| |||| ||||||||||||| Sbjct: 26074 gcgcccggcgcgcacgtcgccatgtacaaggtgtgc 26039
>ref|XM_873074.1| PREDICTED: Bos taurus similar to Vacuolar protein sorting 26 homolog (VPS26 protein homolog), transcript variant 2 (LOC614321), mRNA Length = 2399 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tcttcctggcgggctacgag 35 |||||||||||||||||||| Sbjct: 797 tcttcctggcgggctacgag 816
>ref|XM_864387.1| PREDICTED: Bos taurus similar to Vacuolar protein sorting 26 homolog (VPS26 protein homolog), transcript variant 1 (LOC614321), mRNA Length = 2345 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tcttcctggcgggctacgag 35 |||||||||||||||||||| Sbjct: 743 tcttcctggcgggctacgag 762
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcacggcgctgacctgctgg 156 |||||||||||||||||||| Sbjct: 5439956 gcacggcgctgacctgctgg 5439975
>ref|XM_844113.1| PREDICTED: Canis familiaris similar to Vacuolar protein sorting 26 homolog (VPS26 protein homolog) (LOC607442), mRNA Length = 1603 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tcttcctggcgggctacgag 35 |||||||||||||||||||| Sbjct: 1280 tcttcctggcgggctacgag 1299
>emb|AL603649.9| Human DNA sequence from clone RP11-326N3 on chromosome 9 Contains part of the CRSP8 gene for subunit 8 of a cofactor required for Sp1 transcriptional activation and a CpG island, complete sequence Length = 77621 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 acgtgctctccctctccctc 308 |||||||||||||||||||| Sbjct: 45589 acgtgctctccctctccctc 45608
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17, complete sequence Length = 167269 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 96 cacggcacgcacacctcgagcacggcggcggg 127 |||||||| ||||| |||||||||||||||| Sbjct: 139408 cacggcacccacacggcgagcacggcggcggg 139377
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggcatggaggtcgccgtcgc 277 |||||||||||||||||||| Sbjct: 1941445 ggcatggaggtcgccgtcgc 1941426
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 tggaggtcgccgtcgccgacggcg 285 ||||||||| |||||||||||||| Sbjct: 1965031 tggaggtcgtcgtcgccgacggcg 1965008
>gb|AE009540.1| Brucella melitensis 16M chromosome I, section 97 of 195 of the complete sequence Length = 10277 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 caagggcatggcgccccgcgcgcg 199 ||||| |||||||||||||||||| Sbjct: 9310 caaggccatggcgccccgcgcgcg 9333
>gb|AE009529.1| Brucella melitensis 16M chromosome I, section 86 of 195 of the complete sequence Length = 12616 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 caagggcatggcgccccgcgcgcg 199 ||||| |||||||||||||||||| Sbjct: 11593 caaggccatggcgccccgcgcgcg 11570
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gtgctctccctctccctcgg 310 |||||||||||||||||||| Sbjct: 142784 gtgctctccctctccctcgg 142803
>dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0467G09 Length = 158204 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gtgctctccctctccctcgg 310 |||||||||||||||||||| Sbjct: 48921 gtgctctccctctccctcgg 48940
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 caagggcatggcgccccgcgcgcg 199 ||||| |||||||||||||||||| Sbjct: 1083260 caaggccatggcgccccgcgcgcg 1083283 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 caagggcatggcgccccgcgcgcg 199 ||||| |||||||||||||||||| Sbjct: 963162 caaggccatggcgccccgcgcgcg 963139
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gtcgccgtcgccgacggcgt 286 |||||||||||||||||||| Sbjct: 117184 gtcgccgtcgccgacggcgt 117203
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gtcgccgtcgccgacggcgt 286 |||||||||||||||||||| Sbjct: 17054 gtcgccgtcgccgacggcgt 17073
>dbj|AB091928.1| Camelus dromedarius IgVH mRNA for immunoglobulin heavy chain VHDJ region, partial cds, clone:TH0100H Length = 432 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 agggcatggaggtcgccgtcgccg 279 ||||||| |||||||||||||||| Sbjct: 401 agggcatcgaggtcgccgtcgccg 424
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 tgcacggcgctgacctgctg 155 |||||||||||||||||||| Sbjct: 411601 tgcacggcgctgacctgctg 411620
>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151176 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gtgctctccctctccctcgg 310 |||||||||||||||||||| Sbjct: 30534 gtgctctccctctccctcgg 30553
>emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa0036A15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 195500 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gtgctctccctctccctcgg 310 |||||||||||||||||||| Sbjct: 264 gtgctctccctctccctcgg 245
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 caagggcatggcgccccgcgcgcg 199 ||||| |||||||||||||||||| Sbjct: 1080411 caaggccatggcgccccgcgcgcg 1080434 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 caagggcatggcgccccgcgcgcg 199 ||||| |||||||||||||||||| Sbjct: 960282 caaggccatggcgccccgcgcgcg 960259
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 cgcgtcagggacggccaagggcat 184 |||||| ||||||||||||||||| Sbjct: 2115267 cgcgtcggggacggccaagggcat 2115290
>emb|AL670446.8| Mouse DNA sequence from clone RP23-291H3 on chromosome 4, complete sequence Length = 171444 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 tgctctccctctccctcggc 311 |||||||||||||||||||| Sbjct: 40796 tgctctccctctccctcggc 40815 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,420,470 Number of Sequences: 3902068 Number of extensions: 2420470 Number of successful extensions: 140353 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 137653 Number of HSP's gapped (non-prelim): 2695 length of query: 376 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 354 effective length of database: 17,147,199,772 effective search space: 6070108719288 effective search space used: 6070108719288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
