ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast57a01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK059777.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B01, full insert sequence Length = 948 Score = 281 bits (142), Expect = 1e-72 Identities = 220/246 (89%) Strand = Plus / Plus Query: 208 tgcaaggggctttggtcttccagccaagacatcaaacacgaaagtgatacttaatggtgg 267 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 220 tgcaaagggctttggtcttccagccaagacatcaaacacaaaagtgatacttaacggtgg 279 Query: 268 tcagaaagttacgttcgccaggccagacggctactttgcttttcacaacgtgcctgctgg 327 ||||| ||||| || ||||||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 280 tcagagggttacatttgccaggccagatggctactttgcattccacaatgtgccagctgg 339 Query: 328 gactcatttgatcgaagtttcctcacttggctacttcttctcaccagttcgagtggacat 387 |||||||| || || || |||||| | |||||||| || ||||||||||| || ||||| Sbjct: 340 tactcatttaattgaggtctcctcattgggctacttattttcaccagttcgggtagacat 399 Query: 388 cagtgccaggaatcctgggcatattcaagcagcattgactgagaacagaagagtcctaaa 447 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 400 cagtgccaggaatcctgggcacattcaagcagcattgactgaaaacagaagagttctaaa 459 Query: 448 tgagct 453 |||||| Sbjct: 460 tgagct 465 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 155 cagcccggatccggcgagggacacaccatcgccggccgcatcaggatcgaagctgcaag 213 ||||||||||| | ||||| ||||| ||||| |||||||||| |||||| |||||||| Sbjct: 155 cagcccggatctgctgaggggcacacgatcgcgggccgcatcaagatcgatgctgcaag 213
>gb|AY104043.1| Zea mays PCO145885 mRNA sequence Length = 1057 Score = 222 bits (112), Expect = 8e-55 Identities = 208/240 (86%) Strand = Plus / Plus Query: 214 gggctttggtcttccagccaagacatcaaacacgaaagtgatacttaatggtggtcagaa 273 ||||||||||||| || | |||||||||||||| ||||||||||||||||| || |||| Sbjct: 205 gggctttggtcttgcaacaaagacatcaaacacaaaagtgatacttaatggcggccagag 264 Query: 274 agttacgttcgccaggccagacggctactttgcttttcacaacgtgcctgctgggactca 333 ||||| || ||||||||||| ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 265 ggttacatttgccaggccagatggctactttgcattccacaacgtgccagctggaactca 324 Query: 334 tttgatcgaagtttcctcacttggctacttcttctcaccagttcgagtggacatcagtgc 393 | |||| || || |||||| |||| |||||||| || ||||||||||| || |||||||| Sbjct: 325 tctgattgaggtctcctcaattggttacttcttttccccagttcgagtagatatcagtgc 384 Query: 394 caggaatcctgggcatattcaagcagcattgactgagaacagaagagtcctaaatgagct 453 ||||||||||| |||||||||||||||||||||| | |||||||| ||||||||||| Sbjct: 385 aaggaatcctggatatattcaagcagcattgactgaaactagaagagttctaaatgagct 444
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 133 bits (67), Expect = 6e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 208 tgcaaggggctttggtcttccagccaagacatcaaacacgaaagtgatacttaatggtgg 267 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 25880935 tgcaaagggctttggtcttccagccaagacatcaaacacaaaagtgatacttaacggtgg 25880994 Query: 268 tcagaaagttacgttcgccaggccagacggctactttgc 306 ||||| ||||| || ||||||||||| ||||||||||| Sbjct: 25880995 tcagagggttacatttgccaggccagatggctactttgc 25881033 Score = 119 bits (60), Expect = 8e-24 Identities = 75/80 (93%) Strand = Plus / Plus Query: 374 gttcgagtggacatcagtgccaggaatcctgggcatattcaagcagcattgactgagaac 433 ||||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 25881519 gttcgggtagacatcagtgccaggaatcctgggcacattcaagcagcattgactgaaaac 25881578 Query: 434 agaagagtcctaaatgagct 453 |||||||| ||||||||||| Sbjct: 25881579 agaagagttctaaatgagct 25881598 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 45 cgacgacgacgacggcgacctc 66 |||||||||||||||||||||| Sbjct: 25564334 cgacgacgacgacggcgacctc 25564313 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 17160255 gcgacgacgacgacggcgac 17160236
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 133 bits (67), Expect = 6e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 208 tgcaaggggctttggtcttccagccaagacatcaaacacgaaagtgatacttaatggtgg 267 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 36033 tgcaaagggctttggtcttccagccaagacatcaaacacaaaagtgatacttaacggtgg 36092 Query: 268 tcagaaagttacgttcgccaggccagacggctactttgc 306 ||||| ||||| || ||||||||||| ||||||||||| Sbjct: 36093 tcagagggttacatttgccaggccagatggctactttgc 36131 Score = 119 bits (60), Expect = 8e-24 Identities = 75/80 (93%) Strand = Plus / Plus Query: 374 gttcgagtggacatcagtgccaggaatcctgggcatattcaagcagcattgactgagaac 433 ||||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 36617 gttcgggtagacatcagtgccaggaatcctgggcacattcaagcagcattgactgaaaac 36676 Query: 434 agaagagtcctaaatgagct 453 |||||||| ||||||||||| Sbjct: 36677 agaagagttctaaatgagct 36696
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 133 bits (67), Expect = 6e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 208 tgcaaggggctttggtcttccagccaagacatcaaacacgaaagtgatacttaatggtgg 267 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 163139 tgcaaagggctttggtcttccagccaagacatcaaacacaaaagtgatacttaacggtgg 163198 Query: 268 tcagaaagttacgttcgccaggccagacggctactttgc 306 ||||| ||||| || ||||||||||| ||||||||||| Sbjct: 163199 tcagagggttacatttgccaggccagatggctactttgc 163237 Score = 119 bits (60), Expect = 8e-24 Identities = 75/80 (93%) Strand = Plus / Plus Query: 374 gttcgagtggacatcagtgccaggaatcctgggcatattcaagcagcattgactgagaac 433 ||||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 163723 gttcgggtagacatcagtgccaggaatcctgggcacattcaagcagcattgactgaaaac 163782 Query: 434 agaagagtcctaaatgagct 453 |||||||| ||||||||||| Sbjct: 163783 agaagagttctaaatgagct 163802
>ref|NM_128088.3| Arabidopsis thaliana unknown protein AT2G25310 mRNA, complete cds Length = 1048 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 248 aaagtgatacttaatggtggtcagaaagttacgttcgccaggccagacggctactttgct 307 ||||| ||||| |||||||| ||||| ||||||| |||||| || || |||||| || Sbjct: 274 aaagttatactcaatggtggacagaagattacgtttctcaggcctgatggatactttact 333 Query: 308 tttcacaacgtgcctgctgggactcatttgatcgaagt 345 ||||| | ||||||||||||||||||||||| ||||| Sbjct: 334 tttcatgaagtgcctgctgggactcatttgattgaagt 371
>gb|BT006136.1| Arabidopsis thaliana clone U50160 unknown protein (At2g25310) mRNA, complete cds Length = 664 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 248 aaagtgatacttaatggtggtcagaaagttacgttcgccaggccagacggctactttgct 307 ||||| ||||| |||||||| ||||| ||||||| |||||| || || |||||| || Sbjct: 187 aaagttatactcaatggtggacagaagattacgtttctcaggcctgatggatactttact 246 Query: 308 tttcacaacgtgcctgctgggactcatttgatcgaagt 345 ||||| | ||||||||||||||||||||||| ||||| Sbjct: 247 tttcatgaagtgcctgctgggactcatttgattgaagt 284
>emb|BX821995.1|CNS0A92Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZG03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1047 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 248 aaagtgatacttaatggtggtcagaaagttacgttcgccaggccagacggctactttgct 307 ||||| ||||| |||||||| ||||| ||||||| |||||| || || |||||| || Sbjct: 274 aaagttatactcaatggtggacagaagattacgtttctcaggcctgatggatactttact 333 Query: 308 tttcacaacgtgcctgctgggactcatttgatcgaagt 345 ||||| | ||||||||||||||||||||||| ||||| Sbjct: 334 tttcatgaagtgcctgctgggactcatttgattgaagt 371
>emb|BX821994.1|CNS0A92P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZG02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 984 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 248 aaagtgatacttaatggtggtcagaaagttacgttcgccaggccagacggctactttgct 307 ||||| ||||| |||||||| ||||| ||||||| |||||| || || |||||| || Sbjct: 273 aaagttatactcaatggtggacagaagattacgtttctcaggcctgatggatactttact 332 Query: 308 tttcacaacgtgcctgctgggactcatttgatcgaagt 345 ||||| | ||||||||||||||||||||||| ||||| Sbjct: 333 tttcatgaagtgcctgctgggactcatttgattgaagt 370
>gb|BT004317.1| Arabidopsis thaliana clone RAFL15-47-D16 (R50160) unknown protein (At2g25310) mRNA, complete cds Length = 1052 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 248 aaagtgatacttaatggtggtcagaaagttacgttcgccaggccagacggctactttgct 307 ||||| ||||| |||||||| ||||| ||||||| |||||| || || |||||| || Sbjct: 261 aaagttatactcaatggtggacagaagattacgtttctcaggcctgatggatactttact 320 Query: 308 tttcacaacgtgcctgctgggactcatttgatcgaagt 345 ||||| | ||||||||||||||||||||||| ||||| Sbjct: 321 tttcatgaagtgcctgctgggactcatttgattgaagt 358
>ref|NM_119365.3| Arabidopsis thaliana unknown protein AT4G32130 mRNA, complete cds Length = 1029 Score = 60.0 bits (30), Expect = 7e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 248 aaagtgatacttaatggtggtcagaaagttacgttcgccaggccagacggctactttgct 307 ||||| ||||| || ||||| ||| | ||||| ||| |||||| || || |||||| | Sbjct: 278 aaagttatactcaacggtggacagcatgttactttcctcaggccggatggatactttacc 337 Query: 308 tttcacaacgtgcctgctgggactcatttgatcgaagtttcctcacttggctacttcttc 367 || ||||| ||||| || ||||||||| |||| ||||||| |||| |||||||||||| Sbjct: 338 ttccacaaagtgccagcggggactcatctgattgaagtttatgcactgggctacttcttc 397 Query: 368 tcaccagttcgagt 381 || ||||| ||||| Sbjct: 398 tccccagtgcgagt 411
>gb|AY114611.1| Arabidopsis thaliana unknown protein (At4g32130) mRNA, complete cds Length = 693 Score = 60.0 bits (30), Expect = 7e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 248 aaagtgatacttaatggtggtcagaaagttacgttcgccaggccagacggctactttgct 307 ||||| ||||| || ||||| ||| | ||||| ||| |||||| || || |||||| | Sbjct: 172 aaagttatactcaacggtggacagcatgttactttcctcaggccggatggatactttacc 231 Query: 308 tttcacaacgtgcctgctgggactcatttgatcgaagtttcctcacttggctacttcttc 367 || ||||| ||||| || ||||||||| |||| ||||||| |||| |||||||||||| Sbjct: 232 ttccacaaagtgccagcggggactcatctgattgaagtttatgcactgggctacttcttc 291 Query: 368 tcaccagttcgagt 381 || ||||| ||||| Sbjct: 292 tccccagtgcgagt 305
>gb|AY072335.1| Arabidopsis thaliana unknown protein (At4g32130; F10N7.60) mRNA, complete cds Length = 932 Score = 60.0 bits (30), Expect = 7e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 248 aaagtgatacttaatggtggtcagaaagttacgttcgccaggccagacggctactttgct 307 ||||| ||||| || ||||| ||| | ||||| ||| |||||| || || |||||| | Sbjct: 182 aaagttatactcaacggtggacagcatgttactttcctcaggccggatggatactttacc 241 Query: 308 tttcacaacgtgcctgctgggactcatttgatcgaagtttcctcacttggctacttcttc 367 || ||||| ||||| || ||||||||| |||| ||||||| |||| |||||||||||| Sbjct: 242 ttccacaaagtgccagcggggactcatctgattgaagtttatgcactgggctacttcttc 301 Query: 368 tcaccagttcgagt 381 || ||||| ||||| Sbjct: 302 tccccagtgcgagt 315
>emb|BX827707.1|CNS0A3RD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZB05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 968 Score = 60.0 bits (30), Expect = 7e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 248 aaagtgatacttaatggtggtcagaaagttacgttcgccaggccagacggctactttgct 307 ||||| ||||| || ||||| ||| | ||||| ||| |||||| || || |||||| | Sbjct: 267 aaagttatactcaacggtggacagcatgttactttcctcaggccggatggatactttacc 326 Query: 308 tttcacaacgtgcctgctgggactcatttgatcgaagtttcctcacttggctacttcttc 367 || ||||| ||||| || ||||||||| |||| ||||||| |||| |||||||||||| Sbjct: 327 ttccacaaagtgccagcggggactcatctgattgaagtttatgcactgggctacttcttc 386 Query: 368 tcaccagttcgagt 381 || ||||| ||||| Sbjct: 387 tccccagtgcgagt 400
>emb|BX826646.1|CNS0A4L2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB4ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 724 Score = 52.0 bits (26), Expect = 0.002 Identities = 107/134 (79%) Strand = Plus / Plus Query: 248 aaagtgatacttaatggtggtcagaaagttacgttcgccaggccagacggctactttgct 307 ||||| ||||| || ||||| ||| | ||||| ||| |||||| || || |||||| | Sbjct: 61 aaagttatactcaacggtggacagcatgttactttcctcaggccggatggatactttacc 120 Query: 308 tttcacaacgtgcctgctgggactcatttgatcgaagtttcctcacttggctacttcttc 367 || ||||| ||||| || || |||||| |||| ||||||| |||| |||||||||||| Sbjct: 121 ttccacaaagtgccagcgggtactcatctgattgaagtttatgcactgggctacttcttc 180 Query: 368 tcaccagttcgagt 381 || ||||| ||||| Sbjct: 181 tccccagtgcgagt 194
>emb|AL021636.3|ATF10N7 Arabidopsis thaliana DNA chromosome 4, BAC clone F10N7 (ESSA project) Length = 96585 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 311 cacaacgtgcctgctgggactcatttgatcgaagtttcctcacttggctacttcttctca 370 ||||| ||||| || ||||||||| |||| ||||||| |||| |||||||||||||| Sbjct: 18088 cacaaagtgccagcggggactcatctgattgaagtttatgcactgggctacttcttctcc 18147 Query: 371 ccagt 375 ||||| Sbjct: 18148 ccagt 18152
>gb|AC007070.5| Arabidopsis thaliana chromosome 2 clone T22F11 map GPA1, complete sequence Length = 86017 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 317 gtgcctgctgggactcatttgatcgaagt 345 ||||||||||||||||||||||| ||||| Sbjct: 38601 gtgcctgctgggactcatttgattgaagt 38629
>emb|AL161580.2|ATCHRIV76 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 76 Length = 165698 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 311 cacaacgtgcctgctgggactcatttgatcgaagtttcctcacttggctacttcttctca 370 ||||| ||||| || ||||||||| |||| ||||||| |||| |||||||||||||| Sbjct: 95865 cacaaagtgccagcggggactcatctgattgaagtttatgcactgggctacttcttctcc 95806 Query: 371 ccagt 375 ||||| Sbjct: 95805 ccagt 95801
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 45 cgacgacgacgacggcgacctcggccgcggc 75 ||||||||||||||||||| ||||| ||||| Sbjct: 42941 cgacgacgacgacggcgacgtcggcggcggc 42911
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 45 cgacgacgacgacggcgacctcg 67 ||||||||||||||||||||||| Sbjct: 75211 cgacgacgacgacggcgacctcg 75189
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 45 cgacgacgacgacggcgacctcggccgcggc 75 ||||||||||||||||||| ||||| ||||| Sbjct: 18645065 cgacgacgacgacggcgacgtcggcggcggc 18645035 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcgacc 64 |||||||||||||||||||||| Sbjct: 10077773 cgcgacgacgacgacggcgacc 10077794 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgacc 64 ||||||||||||||||||||| Sbjct: 18880528 gcgacgacgacgacggcgacc 18880508
>ref|NM_211388.1| Eremothecium gossypii AGL341Cp (AGL341C), mRNA Length = 570 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 45 cgacgacgacgacggcgacctcg 67 ||||||||||||||||||||||| Sbjct: 351 cgacgacgacgacggcgacctcg 373
>ref|XM_465086.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2455 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcgacctcggccgcggcg 76 ||||||||||| ||||||| ||||||| |||||| Sbjct: 1691 cgcgacgacgatgacggcgtcctcggcggcggcg 1724
>gb|AY676930.1| Oryza sativa (indica cultivar-group) transcription factor WRKY31 (WRKY31) mRNA, complete cds Length = 1086 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcgacc 64 |||||||||||||||||||||| Sbjct: 957 cgcgacgacgacgacggcgacc 978
>gb|AC010919.11| Drosophila melanogaster clone BACR32K23, complete sequence Length = 198967 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgacctcggc 69 |||||||||||||||||||| ||||| Sbjct: 11829 gcgacgacgacgacggcgacgtcggc 11804
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 gacctcggccgcggcgacgatg 82 |||||||||||||||||||||| Sbjct: 3563064 gacctcggccgcggcgacgatg 3563043 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 cgacggcgacctcggccgcggcga 77 |||| ||||||||||||||||||| Sbjct: 1503011 cgaccgcgacctcggccgcggcga 1502988
>gb|AY118524.1| Drosophila melanogaster LD22609 full insert cDNA Length = 8362 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgacctcggc 69 |||||||||||||||||||| ||||| Sbjct: 732 gcgacgacgacgacggcgacgtcggc 757
>ref|NM_132858.2| Drosophila melanogaster CG9056-RA (CG9056), mRNA Length = 8336 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgacctcggc 69 |||||||||||||||||||| ||||| Sbjct: 732 gcgacgacgacgacggcgacgtcggc 757
>gb|AC013431.9|AC013431 Drosophila melanogaster, chromosome X, region 13E-13F, BAC clone BACR22H11, complete sequence Length = 191558 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgacctcggc 69 |||||||||||||||||||| ||||| Sbjct: 175753 gcgacgacgacgacggcgacgtcggc 175728
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 43 cgcgacgacgacgacggcgacctcggccgcggcg 76 ||||||||||| ||||||| ||||||| |||||| Sbjct: 11376711 cgcgacgacgatgacggcgtcctcggcggcggcg 11376678 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 gacgacgacgacggcgacctc 66 ||||||||||||||||||||| Sbjct: 29131421 gacgacgacgacggcgacctc 29131441 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 48 cgacgacgacggcgacctcggccgcggcg 76 ||||||||||| |||||||| |||||||| Sbjct: 24303769 cgacgacgacgccgacctcgtccgcggcg 24303797 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgacc 64 ||||||||||||||||||||| Sbjct: 21644958 gcgacgacgacgacggcgacc 21644978
>emb|BX821996.1|CNS0A92R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZG04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 320 cctgctgggactcatttgatcgaagt 345 |||||||||||||||||||| ||||| Sbjct: 353 cctgctgggactcatttgattgaagt 378
>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0466E03 Length = 138343 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcgacc 64 |||||||||||||||||||||| Sbjct: 107077 cgcgacgacgacgacggcgacc 107098
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 cgacgacgacggcgacctcggccgcg 73 ||||||||| |||||||||||||||| Sbjct: 3996530 cgacgacgaaggcgacctcggccgcg 3996555
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 45 cgacgacgacgacggcgacctc 66 |||||||||||||||||||||| Sbjct: 82651 cgacgacgacgacggcgacctc 82630
>dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1253_E02 Length = 166645 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcgacc 64 |||||||||||||||||||||| Sbjct: 37451 cgcgacgacgacgacggcgacc 37472
>dbj|AP004123.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1654_A02 Length = 128520 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 43 cgcgacgacgacgacggcgacctcggccgcggcg 76 ||||||||||| ||||||| ||||||| |||||| Sbjct: 46183 cgcgacgacgatgacggcgtcctcggcggcggcg 46150
>dbj|AK107164.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-F06, full insert sequence Length = 2456 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcgacctcggccgcggcg 76 ||||||||||| ||||||| ||||||| |||||| Sbjct: 1692 cgcgacgacgatgacggcgtcctcggcggcggcg 1725
>dbj|AK065265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002K14, full insert sequence Length = 1714 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcgacc 64 |||||||||||||||||||||| Sbjct: 1252 cgcgacgacgacgacggcgacc 1273
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 cgacgacggcgacctcggccgcggcg 76 |||||| ||||||||||||||||||| Sbjct: 32885 cgacgaaggcgacctcggccgcggcg 32910
>gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 of 74 of the complete sequence Length = 303344 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgacctcggc 69 |||||||||||||||||||| ||||| Sbjct: 179743 gcgacgacgacgacggcgacgtcggc 179718
>gb|AC024817.1| Caenorhabditis elegans cosmid Y54G2A, complete sequence Length = 286680 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 cgcgcgacgacgacgacggcg 61 ||||||||||||||||||||| Sbjct: 243336 cgcgcgacgacgacgacggcg 243356
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gacctcggccgcggcgacgat 81 ||||||||||||||||||||| Sbjct: 82222 gacctcggccgcggcgacgat 82242
>ref|XM_466319.1| Oryza sativa (japonica cultivar-group), mRNA Length = 552 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgacc 64 ||||||||||||||||||||| Sbjct: 392 gcgacgacgacgacggcgacc 412
>ref|XM_478433.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1600 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 gcgcgacgacgacgacggcga 62 ||||||||||||||||||||| Sbjct: 53 gcgcgacgacgacgacggcga 33
>ref|XM_478432.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1810 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 gcgcgacgacgacgacggcga 62 ||||||||||||||||||||| Sbjct: 1519 gcgcgacgacgacgacggcga 1539
>gb|AY023319.1| Oryza sativa microsatellite MRG5644 containing (GTC)X8, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 cgacgacgacgacggcgacctcggc 69 |||||||||||||| |||||||||| Sbjct: 119 cgacgacgacgacgacgacctcggc 95
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cggccgcggcgacgatgagcc 86 ||||||||||||||||||||| Sbjct: 3014471 cggccgcggcgacgatgagcc 3014451 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 45 cgacgacgacgacggcgacctcggccgc 72 ||||||||||||||||| || ||||||| Sbjct: 13125 cgacgacgacgacggcggccgcggccgc 13098
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cggccgcggcgacgatgagcc 86 ||||||||||||||||||||| Sbjct: 217806 cggccgcggcgacgatgagcc 217826
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 atcgtcctcgccgccgtcctg 121 ||||||||||||||||||||| Sbjct: 197991 atcgtcctcgccgccgtcctg 197971
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 cgcgcgacgacgacgacggcg 61 ||||||||||||||||||||| Sbjct: 910387 cgcgcgacgacgacgacggcg 910407
>emb|AL359834.18| Human DNA sequence from clone RP11-121P12 on chromosome 1 Contains the 3' end of a novel gene, complete sequence Length = 70248 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 6 acagcaggcggaggagaagagaaag 30 |||||||| |||||||||||||||| Sbjct: 7272 acagcagggggaggagaagagaaag 7248
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 gacctcggccgcggcgacgat 81 ||||||||||||||||||||| Sbjct: 35460 gacctcggccgcggcgacgat 35440
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cggccgcggcgacgatgagcc 86 ||||||||||||||||||||| Sbjct: 4069579 cggccgcggcgacgatgagcc 4069599
>emb|AJ579650.1|STE579650 Streptomyces tenebrarius tobramycin biosynthetic gene cluster, strain ATCC 17920 Length = 13802 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 ggcgacctcggccgcggcgac 78 ||||||||||||||||||||| Sbjct: 2821 ggcgacctcggccgcggcgac 2841
>gb|AF375251.1| Gnathotrupes sp. SCL07 18S ribosomal RNA gene, partial sequence Length = 1725 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 cgcgcgacgacgacgacggcg 61 ||||||||||||||||||||| Sbjct: 1445 cgcgcgacgacgacgacggcg 1425
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 atcgtcctcgccgccgtcctg 121 ||||||||||||||||||||| Sbjct: 2585797 atcgtcctcgccgccgtcctg 2585777 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 cgacctcggccgcggcgacga 80 ||||||||||||||||||||| Sbjct: 636063 cgacctcggccgcggcgacga 636043 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 tcctcgccgccgtcctggcg 124 |||||||||||||||||||| Sbjct: 1962313 tcctcgccgccgtcctggcg 1962332
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 cggcgacctcggccgcggcga 77 ||||||||||||||||||||| Sbjct: 1595660 cggcgacctcggccgcggcga 1595680
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 gcgcgacgacgacgacggcga 62 ||||||||||||||||||||| Sbjct: 20031412 gcgcgacgacgacgacggcga 20031392 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 cgacgacgacgacggcgacctcggc 69 |||||||||||||| |||||||||| Sbjct: 3992193 cgacgacgacgacgacgacctcggc 3992217 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 22836092 gcgacgacgacgacggcgac 22836111 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcgacctcggcc 70 |||||||||||||||| |||| |||||| Sbjct: 4489915 cgcgacgacgacgacgacgacgtcggcc 4489942 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgacctcg 67 ||||||||||||||| |||||||| Sbjct: 4291177 gcgacgacgacgacgacgacctcg 4291200 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 gcgcgacgacgacgacggcg 61 |||||||||||||||||||| Sbjct: 784347 gcgcgacgacgacgacggcg 784366
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgacc 64 ||||||||||||||||||||| Sbjct: 38884526 gcgacgacgacgacggcgacc 38884506
>gb|AY198327.1| Lolium perenne MADS2 mRNA, complete cds Length = 1083 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 gacgacgacggcgacctcggc 69 ||||||||||||||||||||| Sbjct: 223 gacgacgacggcgacctcggc 203
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgacc 64 ||||||||||||||||||||| Sbjct: 157408 gcgacgacgacgacggcgacc 157388
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgacc 64 ||||||||||||||||||||| Sbjct: 133908 gcgacgacgacgacggcgacc 133928
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 gctcgcgcgacgacgacgacg 58 ||||||||||||||||||||| Sbjct: 2601865 gctcgcgcgacgacgacgacg 2601845 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ctcggccgcggcgacgatga 83 |||||||||||||||||||| Sbjct: 7032158 ctcggccgcggcgacgatga 7032177
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgacc 64 ||||||||||||||||||||| Sbjct: 49312 gcgacgacgacgacggcgacc 49292
>dbj|AP003843.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1656_E11 Length = 116211 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 cgacgacgacgacggcgacctcggc 69 |||||||||||||| |||||||||| Sbjct: 94919 cgacgacgacgacgacgacctcggc 94943
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2055_H10 Length = 119290 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 48 cgacgacgacggcgacctcggccgcggcg 76 ||||||||||| |||||||| |||||||| Sbjct: 104157 cgacgacgacgccgacctcgtccgcggcg 104185
>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0407A09 Length = 103788 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 48 cgacgacgacggcgacctcggccgcggcg 76 ||||||||||| |||||||| |||||||| Sbjct: 33307 cgacgacgacgccgacctcgtccgcggcg 33335
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0025F02 Length = 156545 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgacc 64 ||||||||||||||||||||| Sbjct: 26355 gcgacgacgacgacggcgacc 26375
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 gacgacgacgacggcgacctc 66 ||||||||||||||||||||| Sbjct: 21389 gacgacgacgacggcgacctc 21409
>dbj|AK109627.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-B12, full insert sequence Length = 1599 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 gcgcgacgacgacgacggcga 62 ||||||||||||||||||||| Sbjct: 53 gcgcgacgacgacgacggcga 33
>dbj|AK106236.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-C04, full insert sequence Length = 1810 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 gcgcgacgacgacgacggcga 62 ||||||||||||||||||||| Sbjct: 1519 gcgcgacgacgacgacggcga 1539
>dbj|AK103300.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125C09, full insert sequence Length = 933 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgacc 64 ||||||||||||||||||||| Sbjct: 118 gcgacgacgacgacggcgacc 98
>dbj|AK065521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030G02, full insert sequence Length = 2674 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 cgacgacgacgacggcgacctcggc 69 |||||||||||||| |||||||||| Sbjct: 600 cgacgacgacgacgacgacctcggc 576
>dbj|AP003850.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1793_E11 Length = 101342 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 gcgcgacgacgacgacggcga 62 ||||||||||||||||||||| Sbjct: 64972 gcgcgacgacgacgacggcga 64952
>gb|AF035379.1|AF035379 Lolium temulentum MADS-box protein 2 (MADS2) mRNA, alternatively spliced product, complete cds Length = 1062 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 gacgacgacggcgacctcggc 69 ||||||||||||||||||||| Sbjct: 222 gacgacgacggcgacctcggc 202
>gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, complete sequence Length = 337658 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 gaagctgcaaggggctttggt 223 ||||||||||||||||||||| Sbjct: 176363 gaagctgcaaggggctttggt 176343
>gb|AF411842.1| Elaeis guineensis MADS box transcription factor (SQUA3) mRNA, complete cds Length = 1268 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 gacgacgacggcgacctcggc 69 ||||||||||||||||||||| Sbjct: 286 gacgacgacggcgacctcggc 266
>emb|AJ810851.1| Streptomyces sp. DSM 40477, tobramycin biosynthesis gene cluster region Length = 43220 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 ggcgacctcggccgcggcgac 78 ||||||||||||||||||||| Sbjct: 28750 ggcgacctcggccgcggcgac 28730
>ref|XM_482327.1| Oryza sativa (japonica cultivar-group), mRNA Length = 639 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 55 gcgacgacgacgacggcgac 74
>ref|XM_483141.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1458 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cgacgacgacgacggcgacc 64 |||||||||||||||||||| Sbjct: 36 cgacgacgacgacggcgacc 17
>ref|XM_482770.1| Oryza sativa (japonica cultivar-group), mRNA Length = 366 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gacgacgacggcgacctcgg 68 |||||||||||||||||||| Sbjct: 256 gacgacgacggcgacctcgg 275
>ref|XM_480810.1| Oryza sativa (japonica cultivar-group), mRNA Length = 699 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgacctcg 67 |||||| ||||||||||||||||| Sbjct: 110 gcgacggcgacgacggcgacctcg 133
>ref|XM_470079.1| Oryza sativa (japonica cultivar-group), mRNA Length = 531 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 57 cgcgacgacgacgacggcga 38
>ref|XM_470074.1| Oryza sativa (japonica cultivar-group), mRNA Length = 510 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 277 cgcgacgacgacgacggcga 296
>ref|NM_197541.1| Oryza sativa (japonica cultivar-group) putative transcription factor (OSJNBb0060I05.3), mRNA Length = 941 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgacgacggcgacctcg 67 |||||||||||||||||||| Sbjct: 117 cgacgacgacggcgacctcg 98
>ref|XM_470393.1| Oryza sativa (japonica cultivar-group), mRNA Length = 885 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 557 gcgacgacgacgacggcgac 576
>ref|XM_476894.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1615 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcgacctcggcc 70 |||||||||||||||| |||| |||||| Sbjct: 153 cgcgacgacgacgacgacgacgtcggcc 180
>ref|XM_476864.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1842 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgacctcg 67 ||||||||||||||| |||||||| Sbjct: 331 gcgacgacgacgacgacgacctcg 308
>ref|NM_194130.1| Oryza sativa (japonica cultivar-group), mRNA Length = 600 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gcgcgacgacgacgacggcg 61 |||||||||||||||||||| Sbjct: 124 gcgcgacgacgacgacggcg 105
>gb|AC164925.3| Colobus guereza clone CH272-271L4, complete sequence Length = 199954 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 actttgcttttcacaacgtg 319 |||||||||||||||||||| Sbjct: 162693 actttgcttttcacaacgtg 162712
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 gccctcatcgtcctcgccgccgtc 118 |||||||||||||||| ||||||| Sbjct: 783673 gccctcatcgtcctcgtcgccgtc 783650
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 77641 gcgacgacgacgacggcgac 77660
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 128105 gcgacgacgacgacggcgac 128086
>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete sequence Length = 121849 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 2601 gcgacgacgacgacggcgac 2582
>ref|XM_958692.1| Neurospora crassa OR74A hypothetical protein (NCU02828.1) partial mRNA Length = 2772 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 cctcatcgtcctcgccgccgtcct 120 |||||||||| ||||||||||||| Sbjct: 652 cctcatcgtcatcgccgccgtcct 629
>ref|XM_330015.1| Neurospora crassa OR74A hypothetical protein (NCU02828.1) partial mRNA Length = 2772 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 cctcatcgtcctcgccgccgtcct 120 |||||||||| ||||||||||||| Sbjct: 652 cctcatcgtcatcgccgccgtcct 629
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 413377 cgcgacgacgacgacggcga 413358
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 35215535 gcgacgacgacgacggcgac 35215516 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 33820323 cgcgacgacgacgacggcga 33820342 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 33804468 cgcgacgacgacgacggcga 33804487 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 27176290 gcgacgacgacgacggcgac 27176309 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cctcatcgtcctcgccgccg 116 |||||||||||||||||||| Sbjct: 3893667 cctcatcgtcctcgccgccg 3893648
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 94296 gcgacgacgacgacggcgac 94277
>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence, complete sequence Length = 159795 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 68772 cgcgacgacgacgacggcga 68753 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 52917 cgcgacgacgacgacggcga 52898
>gb|AY345224.1| Oryza sativa (japonica cultivar-group) transcription factor MADS56 mRNA, complete cds Length = 1311 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgacgacggcgacctcg 67 |||||||||||||||||||| Sbjct: 157 cgacgacgacggcgacctcg 138
>gb|AY303985.1| Plagiolepis pygmaea isolate P23 microsatellite sequence Length = 532 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 403 gcgacgacgacgacggcgac 384
>emb|Y15955.1|STLV15955 Simian T-cell lymphotropic virus type 1 RNA for pol, env, pX genes, strain PHSu1 Length = 2968 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 ggcggaggagaagagaaagc 31 |||||||||||||||||||| Sbjct: 1944 ggcggaggagaagagaaagc 1925
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 173652 cgcgacgacgacgacggcga 173671
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 3499 cgcgacgacgacgacggcga 3518
>gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 genomic sequence, complete sequence Length = 105841 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgacgacggcgacctcg 67 |||||||||||||||||||| Sbjct: 59671 cgacgacgacggcgacctcg 59652
>gb|AF192748.1| Lampetra fluviatilis synapsin Ib (SYN I) mRNA, complete cds Length = 2098 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cctcggccccgcggcagcggcgga 153 ||||||||| |||||||||||||| Sbjct: 1758 cctcggcccggcggcagcggcgga 1781
>gb|AF192747.1| Lampetra fluviatilis synapsin Ia (SYN I) mRNA, complete cds Length = 2108 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cctcggccccgcggcagcggcgga 153 ||||||||| |||||||||||||| Sbjct: 1758 cctcggcccggcggcagcggcgga 1781
>dbj|AB183149.1| Kluyveromyces marxianus cmcr gene for carbonyl reductase, complete cds Length = 1038 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 actttgcttttcacaacgtg 319 |||||||||||||||||||| Sbjct: 686 actttgcttttcacaacgtg 667
>gb|AE012308.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 216 of 460 of the complete genome Length = 11019 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ctcgcgcgacgacgacgacg 58 |||||||||||||||||||| Sbjct: 9621 ctcgcgcgacgacgacgacg 9602
>gb|AE012121.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 29 of 460 of the complete genome Length = 10770 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cgccgccgtcctggcggcgt 128 |||||||||||||||||||| Sbjct: 8867 cgccgccgtcctggcggcgt 8886
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ctcgccgccgtcctggcggc 126 |||||||||||||||||||| Sbjct: 4830953 ctcgccgccgtcctggcggc 4830972
>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold Length = 1678549 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 actttgcttttcacaacgtg 319 |||||||||||||||||||| Sbjct: 443562 actttgcttttcacaacgtg 443581
>gb|S82431.1| B1=B800/850 light-harvesting protein beta 1...B2=B800/850 light-harvesting protein beta 2 [Rhodospirillum molischianum, DSM 119, Genomic, 5 genes, 2300 nt] Length = 2300 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tcatcgtcctcgccgccgtc 118 |||||||||||||||||||| Sbjct: 1664 tcatcgtcctcgccgccgtc 1683
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cgccgccgtcctggcggcgt 128 |||||||||||||||||||| Sbjct: 319024 cgccgccgtcctggcggcgt 319043
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gcgcgacgacgacgacggcg 61 |||||||||||||||||||| Sbjct: 4985364 gcgcgacgacgacgacggcg 4985345
>emb|AL929345.15| Zebrafish DNA sequence from clone DKEY-211H10 in linkage group 23, complete sequence Length = 222615 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aggcggaggagaagagaaag 30 |||||||||||||||||||| Sbjct: 139526 aggcggaggagaagagaaag 139507
>ref|XM_393924.2| PREDICTED: Apis mellifera similar to CG31670-PA (LOC410444), mRNA Length = 2193 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 316 gcgacgacgacgacggcgac 335
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 30906131 cgcgacgacgacgacggcga 30906150
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgacgacgacgacggcgacc 64 |||||||||||||||||||| Sbjct: 27297861 cgacgacgacgacggcgacc 27297880 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 cgacgacgacgacggcgacctcggccgcggcgacga 80 |||||||||||||| |||| |||||||| |||||| Sbjct: 26353835 cgacgacgacgacgacgacgacggccgcgacgacga 26353870
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 2301642 gcgacgacgacgacggcgac 2301661
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgacgacggcgacctcg 67 |||||||||||||||||||| Sbjct: 20344169 cgacgacgacggcgacctcg 20344150
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cgacgacgacgacggcgacc 64 |||||||||||||||||||| Sbjct: 24457234 cgacgacgacgacggcgacc 24457215 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gacgacgacggcgacctcgg 68 |||||||||||||||||||| Sbjct: 22451198 gacgacgacggcgacctcgg 22451179 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 19466878 gcgacgacgacgacggcgac 19466859 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgacctcg 67 |||||| ||||||||||||||||| Sbjct: 7889388 gcgacggcgacgacggcgacctcg 7889365
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 35305607 gcgacgacgacgacggcgac 35305588 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 33910795 cgcgacgacgacgacggcga 33910814 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 33894940 cgcgacgacgacgacggcga 33894959 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 27267613 gcgacgacgacgacggcgac 27267632 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cctcatcgtcctcgccgccg 116 |||||||||||||||||||| Sbjct: 3893778 cctcatcgtcctcgccgccg 3893759
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cctcatcgtcctcgccgccg 116 |||||||||||||||||||| Sbjct: 100140 cctcatcgtcctcgccgccg 100121
>gb|AC104132.5| Homo sapiens BAC clone RP11-358L15 from 2, complete sequence Length = 25950 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ggaggagaagagaaagctct 34 |||||||||||||||||||| Sbjct: 5524 ggaggagaagagaaagctct 5543
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 tcgtcctcgccgccgtcctggcgg 125 |||||| ||||||||||||||||| Sbjct: 6235287 tcgtccgcgccgccgtcctggcgg 6235264
>gb|AF546144.1|AF546144S1 Streptomyces cavourensis subsp. washingtonensis UnbV (unbV), UnbU (unbU), PksE (pksE), and TebC (tebC) genes, complete cds Length = 9351 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 acaccatcgccggccgcatc 196 |||||||||||||||||||| Sbjct: 3612 acaccatcgccggccgcatc 3631
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cgacctcggccgcggcgacg 79 |||||||||||||||||||| Sbjct: 2483940 cgacctcggccgcggcgacg 2483921
>gb|AC124039.3| Macaca mulatta clone CH250-191K8, complete sequence Length = 174570 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 actttgcttttcacaacgtg 319 |||||||||||||||||||| Sbjct: 45841 actttgcttttcacaacgtg 45860
>gb|AF187532.1|AF187532 Streptomyces nogalater SnoN (snoN) gene, partial cds; C-7 ketoreductase (snoaF), SnoO (snoO), SnoL (snoL), putative glycosyl transferase (snogE), putative hydroxylase (snoaW), putative glycosyl transferase (snogD), SnoK (snoK), nogalonic acid methyl ester cyclase (snoaL), putative dTDP-glucose-4,6-dehydratase (snogK), putative dTDP-4-dehydrorhamnose reductase (snogC), SnoG (snoG), SnogN (snogN), putative polyketide cyclase (snoaM), putative amino methylase (snogA), and putative dTDP-glucose synthase (snogJ) genes, complete cds; and putative aminotransferase (snogI) gene, partial cds Length = 16065 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 acgacgacggcgacctcggc 69 |||||||||||||||||||| Sbjct: 11297 acgacgacggcgacctcggc 11316
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcgacctcggcc 70 |||||||||||||||| |||| |||||| Sbjct: 68634 cgcgacgacgacgacgacgacgtcggcc 68661
>dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1089G05 Length = 161420 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 161107 gcgacgacgacgacggcgac 161088
>dbj|AP004688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036C11 Length = 137995 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 8982 gcgacgacgacgacggcgac 8963
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 gcgcgacgacgacgacggcg 61 |||||||||||||||||||| Sbjct: 104154 gcgcgacgacgacgacggcg 104173
>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1019_E02 Length = 121607 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 29359 gcgacgacgacgacggcgac 29378
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgacctcg 67 ||||||||||||||| |||||||| Sbjct: 112231 gcgacgacgacgacgacgacctcg 112254
>gb|AE005010.1| Halobacterium sp. NRC-1 section 41 of 170 of the complete genome Length = 11088 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 9195 gcgacgacgacgacggcgac 9214
>emb|AL929281.7| Zebrafish DNA sequence from clone CH211-237I22, complete sequence Length = 148678 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cgcgcgacgacgacgacggcgacc 64 |||||||||||||||||| ||||| Sbjct: 127561 cgcgcgacgacgacgacgacgacc 127584
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cgacgacgacgacggcgacc 64 |||||||||||||||||||| Sbjct: 72950 cgacgacgacgacggcgacc 72931
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gacgacgacggcgacctcgg 68 |||||||||||||||||||| Sbjct: 46126 gacgacgacggcgacctcgg 46107
>dbj|AP005517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0090H20 Length = 132628 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgacctcg 67 |||||| ||||||||||||||||| Sbjct: 120675 gcgacggcgacgacggcgacctcg 120652
>dbj|AP005410.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0038P10 Length = 148527 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgacctcg 67 |||||| ||||||||||||||||| Sbjct: 79279 gcgacggcgacgacggcgacctcg 79256
>dbj|AK120160.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030P03, full insert sequence Length = 1528 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 1174 gcgacgacgacgacggcgac 1155
>dbj|AP004691.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0453D01 Length = 147461 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 61635 gcgacgacgacgacggcgac 61616
>ref|XM_559376.1| Anopheles gambiae str. PEST ENSANGP00000029663 (ENSANGG00000024448), partial mRNA Length = 987 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgacgacgacgacggcgacc 64 |||||||||||||||||||| Sbjct: 936 cgacgacgacgacggcgacc 955
>dbj|AK106871.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-D08, full insert sequence Length = 1615 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcgacctcggcc 70 |||||||||||||||| |||| |||||| Sbjct: 153 cgcgacgacgacgacgacgacgtcggcc 180
>dbj|AK105102.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-D05, full insert sequence Length = 2163 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 238 gcgacgacgacgacggcgac 257
>dbj|AK100472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093I21, full insert sequence Length = 1458 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cgacgacgacgacggcgacc 64 |||||||||||||||||||| Sbjct: 36 cgacgacgacgacggcgacc 17
>dbj|AK070135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043P08, full insert sequence Length = 1293 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgacgacggcgacctcg 67 |||||||||||||||||||| Sbjct: 158 cgacgacgacggcgacctcg 139
>gb|AY107482.1| Zea mays PCO119066 mRNA sequence Length = 1052 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 gacgacgacgacggcgacctcggc 69 ||||||||||||| |||||||||| Sbjct: 170 gacgacgacgacgacgacctcggc 147
>emb|CT573363.8| Mouse DNA sequence from clone RP23-443F11 on chromosome 17, complete sequence Length = 86313 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ttaatggtggtcagaaagtt 277 |||||||||||||||||||| Sbjct: 25561 ttaatggtggtcagaaagtt 25580
>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 83125 cgcgacgacgacgacggcga 83144
>emb|AL954838.14| Zebrafish DNA sequence from clone DKEY-12B15 in linkage group 23, complete sequence Length = 268324 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aggcggaggagaagagaaag 30 |||||||||||||||||||| Sbjct: 142525 aggcggaggagaagagaaag 142506
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cgcgacgacgacgacggcga 62 |||||||||||||||||||| Sbjct: 3109344 cgcgacgacgacgacggcga 3109325
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cgacgacgacggcgacctcg 67 |||||||||||||||||||| Sbjct: 20355441 cgacgacgacggcgacctcg 20355422
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcgacgacgacgacggcgac 63 |||||||||||||||||||| Sbjct: 2309423 gcgacgacgacgacggcgac 2309442
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgacgacgacgacggcgacc 64 |||||||||||||||||||| Sbjct: 27223461 cgacgacgacgacggcgacc 27223480 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 cgacgacgacgacggcgacctcggccgcggcgacga 80 |||||||||||||| |||| |||||||| |||||| Sbjct: 26282005 cgacgacgacgacgacgacgacggccgcgacgacga 26282040
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 cgacgacgacgacggcgacctcggccgcggcgacga 80 |||||||||||||| |||| |||||||| |||||| Sbjct: 117819 cgacgacgacgacgacgacgacggccgcgacgacga 117854
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 45 cgacgacgacgacggcgacctcggccgcggcgacga 80 |||||||||||||| |||| |||||||| |||||| Sbjct: 68109 cgacgacgacgacgacgacgacggccgcgacgacga 68144
>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146585 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgacgacgacgacggcgacc 64 |||||||||||||||||||| Sbjct: 110893 cgacgacgacgacggcgacc 110912
>emb|AL772288.12| Mouse DNA sequence from clone RP23-360H6 on chromosome 4, complete sequence Length = 132015 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 cctcatcgtcctcgccgccgtcct 120 |||| ||||||||||||||||||| Sbjct: 67821 cctcctcgtcctcgccgccgtcct 67798
>gb|AF509565.1| Streptomyces sp. JP95 griseorhodin biosynthesis gene cluster, complete sequence Length = 36905 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cctcgccgccgtcctggcgg 125 |||||||||||||||||||| Sbjct: 8699 cctcgccgccgtcctggcgg 8718 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,916,741 Number of Sequences: 3902068 Number of extensions: 3916741 Number of successful extensions: 141551 Number of sequences better than 10.0: 163 Number of HSP's better than 10.0 without gapping: 177 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 134068 Number of HSP's gapped (non-prelim): 7264 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
