ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast56h10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 189 gacttcatccgcaagtcgtgccgcgagacgcagtacccgtcggtgtgcatgcagagcctg 248 ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| Sbjct: 29590763 gacttcatccgcaagtcgtgccgcgcgacgcagtacccggcggtgtgcgtgcagagcctg 29590704 Query: 249 tcgtcgtacggc 260 ||||||||||| Sbjct: 29590703 gcgtcgtacggc 29590692 Score = 54.0 bits (27), Expect = 4e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 403 gccccgcgcgcgattgcctggaga-catggcggacagcgtggg 444 |||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 29590546 gccccgtgcgcgactgcctggagaacatggcggacagcgtggg 29590504 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 376 gcggcgccggcggcaaggcggaggg 400 ||||||||||||||||||||||||| Sbjct: 29082257 gcggcgccggcggcaaggcggaggg 29082281 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgcc 158 ||||||||||||||||||||||||| Sbjct: 5113937 ggcggccgcggccgcggccgctgcc 5113961 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 374 aggcggcgccggcggcaaggcggag 398 |||||||||||||||||||| |||| Sbjct: 22064051 aggcggcgccggcggcaaggtggag 22064027 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 5113957 gcggccgcggccgcggccgc 5113938
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 189 gacttcatccgcaagtcgtgccgcgagacgcagtacccgtcggtgtgcatgcagagcctg 248 ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| Sbjct: 34348 gacttcatccgcaagtcgtgccgcgcgacgcagtacccggcggtgtgcgtgcagagcctg 34289 Query: 249 tcgtcgtacggc 260 ||||||||||| Sbjct: 34288 gcgtcgtacggc 34277 Score = 54.0 bits (27), Expect = 4e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 403 gccccgcgcgcgattgcctggaga-catggcggacagcgtggg 444 |||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 34131 gccccgtgcgcgactgcctggagaacatggcggacagcgtggg 34089
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 189 gacttcatccgcaagtcgtgccgcgagacgcagtacccgtcggtgtgcatgcagagcctg 248 ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| Sbjct: 155269 gacttcatccgcaagtcgtgccgcgcgacgcagtacccggcggtgtgcgtgcagagcctg 155210 Query: 249 tcgtcgtacggc 260 ||||||||||| Sbjct: 155209 gcgtcgtacggc 155198 Score = 54.0 bits (27), Expect = 4e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 403 gccccgcgcgcgattgcctggaga-catggcggacagcgtggg 444 |||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 155052 gccccgtgcgcgactgcctggagaacatggcggacagcgtggg 155010
>dbj|AK069642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026F11, full insert sequence Length = 895 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 189 gacttcatccgcaagtcgtgccgcgagacgcagtacccgtcggtgtgcatgcagagcctg 248 ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| Sbjct: 171 gacttcatccgcaagtcgtgccgcgcgacgcagtacccggcggtgtgcgtgcagagcctg 230 Query: 249 tcgtcgtacggc 260 ||||||||||| Sbjct: 231 gcgtcgtacggc 242 Score = 54.0 bits (27), Expect = 4e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 403 gccccgcgcgcgattgcctggaga-catggcggacagcgtggg 444 |||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 388 gccccgtgcgcgactgcctggagaacatggcggacagcgtggg 430
>ref|XM_481666.1| Oryza sativa (japonica cultivar-group), mRNA Length = 609 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 177 ccggcggccactgacttcatccgcaagtcgtgccgcgagacgcagtacccgtcggtgtgc 236 |||||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||| Sbjct: 61 ccggcggccagcaacttcatccgcaagttgtgccgcgcgacgcagtacccggcggtgtgc 120 Query: 237 atgcagagcctgtcgtcgtacgg 259 ||||||||| | |||||||||| Sbjct: 121 gtgcagagccaggcgtcgtacgg 143 Score = 54.0 bits (27), Expect = 4e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 403 gccccgcgcgcgattgcctggaga-catggcggacagcgtggg 444 |||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 275 gccccgtgcgcgactgcctggagaacatggcggacagcgtggg 317
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 177 ccggcggccactgacttcatccgcaagtcgtgccgcgagacgcagtacccgtcggtgtgc 236 |||||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||| Sbjct: 14580309 ccggcggccagcaacttcatccgcaagttgtgccgcgcgacgcagtacccggcggtgtgc 14580368 Query: 237 atgcagagcctgtcgtcgtacgg 259 ||||||||| | |||||||||| Sbjct: 14580369 gtgcagagccaggcgtcgtacgg 14580391 Score = 54.0 bits (27), Expect = 4e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 403 gccccgcgcgcgattgcctggaga-catggcggacagcgtggg 444 |||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 14580523 gccccgtgcgcgactgcctggagaacatggcggacagcgtggg 14580565 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 21314016 gcggccgcggccgcggccgc 21314035 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 21314035 gcggccgcggccgcggccgc 21314016
>dbj|AP004695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0474F07 Length = 136440 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 177 ccggcggccactgacttcatccgcaagtcgtgccgcgagacgcagtacccgtcggtgtgc 236 |||||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||| Sbjct: 18013 ccggcggccagcaacttcatccgcaagttgtgccgcgcgacgcagtacccggcggtgtgc 18072 Query: 237 atgcagagcctgtcgtcgtacgg 259 ||||||||| | |||||||||| Sbjct: 18073 gtgcagagccaggcgtcgtacgg 18095 Score = 54.0 bits (27), Expect = 4e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 403 gccccgcgcgcgattgcctggaga-catggcggacagcgtggg 444 |||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 18227 gccccgtgcgcgactgcctggagaacatggcggacagcgtggg 18269
>dbj|AP004652.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0002F11 Length = 135446 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 177 ccggcggccactgacttcatccgcaagtcgtgccgcgagacgcagtacccgtcggtgtgc 236 |||||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||| Sbjct: 83783 ccggcggccagcaacttcatccgcaagttgtgccgcgcgacgcagtacccggcggtgtgc 83842 Query: 237 atgcagagcctgtcgtcgtacgg 259 ||||||||| | |||||||||| Sbjct: 83843 gtgcagagccaggcgtcgtacgg 83865 Score = 54.0 bits (27), Expect = 4e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 403 gccccgcgcgcgattgcctggaga-catggcggacagcgtggg 444 |||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 83997 gccccgtgcgcgactgcctggagaacatggcggacagcgtggg 84039
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgcc 158 ||||||||||||||||||||||||| Sbjct: 72975 ggcggccgcggccgcggccgctgcc 72999 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 72995 gcggccgcggccgcggccgc 72976
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10 Length = 166570 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 376 gcggcgccggcggcaaggcggaggg 400 ||||||||||||||||||||||||| Sbjct: 97244 gcggcgccggcggcaaggcggaggg 97268
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgcc 158 ||||||||||||||||||||||||| Sbjct: 156051 ggcggccgcggccgcggccgctgcc 156075 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 156071 gcggccgcggccgcggccgc 156052
>dbj|AK110868.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-E03, full insert sequence Length = 1492 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 376 gcggcgccggcggcaaggcggaggg 400 ||||||||||||||||||||||||| Sbjct: 138 gcggcgccggcggcaaggcggaggg 114
>dbj|AK108188.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-B11, full insert sequence Length = 1059 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgcc 158 ||||||||||||||||||||||||| Sbjct: 732 ggcggccgcggccgcggccgctgcc 756 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 752 gcggccgcggccgcggccgc 733
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgctgcc 158 |||||||||||||||||||||||| Sbjct: 123995 gcggccgcggccgcggccgctgcc 123972 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 123976 gcggccgcggccgcggccgc 123995
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgctgcc 158 |||||||||||||||||||||||| Sbjct: 56976 gcggccgcggccgcggccgctgcc 56953 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 56957 gcggccgcggccgcggccgc 56976
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgctgcc 158 |||||||||||||||||||||||| Sbjct: 16629371 gcggccgcggccgcggccgctgcc 16629348 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 gccgcggccgcggccgctgcc 158 ||||||||||||||||||||| Sbjct: 16610501 gccgcggccgcggccgctgcc 16610481 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 16629352 gcggccgcggccgcggccgc 16629371
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgctgcc 158 |||||||||||||||||||||||| Sbjct: 1985421 gcggccgcggccgcggccgctgcc 1985398 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 1985402 gcggccgcggccgcggccgc 1985421
>dbj|AK107289.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-B09, full insert sequence Length = 2225 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgctgcc 158 |||||||||||||||||||||||| Sbjct: 886 gcggccgcggccgcggccgctgcc 863 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 867 gcggccgcggccgcggccgc 886
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgctgcc 158 |||||||||||||||||||||||| Sbjct: 1993202 gcggccgcggccgcggccgctgcc 1993179 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 1993183 gcggccgcggccgcggccgc 1993202
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgctgcc 158 |||||||||||||||||||||||| Sbjct: 16582604 gcggccgcggccgcggccgctgcc 16582581 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 gccgcggccgcggccgctgcc 158 ||||||||||||||||||||| Sbjct: 16563734 gccgcggccgcggccgctgcc 16563714 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 16582585 gcggccgcggccgcggccgc 16582604
>emb|AL713948.4|CNS07YPR Oryza sativa chromosome 12, . BAC OJ1008_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129944 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgctgcc 158 |||||||||||||||||||||||| Sbjct: 41395 gcggccgcggccgcggccgctgcc 41418 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 gccgcggccgcggccgctgcc 158 ||||||||||||||||||||| Sbjct: 60265 gccgcggccgcggccgctgcc 60285 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 41414 gcggccgcggccgcggccgc 41395
>gb|AY850006.1| Volvox carteri f. nagariensis arsenite-resistance protein mRNA, complete cds Length = 2716 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgctg 156 |||||||||||||||||||||| Sbjct: 1719 gcggccgcggccgcggccgctg 1698 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 1700 gcggccgcggccgcggccgc 1719
>ref|NM_187871.1| Oryza sativa (japonica cultivar-group), Ozsa8315 predicted mRNA Length = 2697 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 117 gcgctggccctcggcctggcggccgcggccgcggccgc 154 |||||||| |||| | ||||||| |||||||||||||| Sbjct: 79 gcgctggcgctcgtcgtggcggcggcggccgcggccgc 116
>ref|XM_464261.1| Oryza sativa (japonica cultivar-group), mRNA Length = 938 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgctgcctc 160 |||||||||||||||||| ||||||| Sbjct: 152 gcggccgcggccgcggcctctgcctc 177
>ref|XM_476454.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1920 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 tggcggccgcggccgcggccgc 154 |||||||||||||||||||||| Sbjct: 565 tggcggccgcggccgcggccgc 544 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 543 ggcggccgcggccgcggccgc 563
>ref|XM_959994.1| Neurospora crassa OR74A hypothetical protein (NCU02493.1) partial mRNA Length = 894 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 377 cggcgccggcggcaaggcggagggca 402 ||||||||||||||||| |||||||| Sbjct: 477 cggcgccggcggcaaggtggagggca 502
>ref|XM_331691.1| Neurospora crassa OR74A hypothetical protein (NCU02493.1) partial mRNA Length = 894 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 377 cggcgccggcggcaaggcggagggca 402 ||||||||||||||||| |||||||| Sbjct: 477 cggcgccggcggcaaggtggagggca 502
>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome Length = 134431 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 tggcggccgcggccgcggccgc 154 |||||||||||||||||||||| Sbjct: 110322 tggcggccgcggccgcggccgc 110343 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 110343 gcggccgcggccgcggccgc 110324
>gb|AC121976.2| Mus musculus BAC clone RP24-286N17 from 8, complete sequence Length = 161146 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 364 cgggcctccgaggcggcgccggcggc 389 |||||||||| ||||||||||||||| Sbjct: 64382 cgggcctccgcggcggcgccggcggc 64357
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 gccgcggccgcggccgctgcct 159 |||||||||||||||||||||| Sbjct: 1754539 gccgcggccgcggccgctgcct 1754518
>ref|XM_962937.1| PREDICTED: Tribolium castaneum similar to CG9907-PA (LOC656403), mRNA Length = 6078 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 138 gccgcggccgcggccgctgcctcggc 163 |||||||| ||||||||||||||||| Sbjct: 1412 gccgcggcagcggccgctgcctcggc 1387
>emb|BX842631.1| Neurospora crassa DNA linkage group I BAC contig B1O14 Length = 119219 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 377 cggcgccggcggcaaggcggagggca 402 ||||||||||||||||| |||||||| Sbjct: 26961 cggcgccggcggcaaggtggagggca 26936
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 129 ggcctggcggccgcggccgcggccgc 154 |||||||| ||||||||||||||||| Sbjct: 57944 ggcctggccgccgcggccgcggccgc 57969
>gb|AF106962.2| Volvox carteri f. nagariensis RlsA (rlsA) gene, partial cds; and somatic regenerator RegA (regA) gene, complete cds Length = 22280 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgctgcctc 160 |||||||||||||||||||| ||||| Sbjct: 14486 gcggccgcggccgcggccgcggcctc 14511 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 14505 gcggccgcggccgcggccgc 14486
>gb|DQ122905.1| Chlamydomonas incerta putative nucleic acid-binding protein (nab1) mRNA, partial cds Length = 711 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 tggcggccgcggccgcggccgc 154 |||||||||||||||||||||| Sbjct: 294 tggcggccgcggccgcggccgc 315 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 315 gcggccgcggccgcggccgc 296
>ref|NM_009569.1| Mus musculus zinc finger protein, multitype 1 (Zfpm1), mRNA Length = 3398 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 364 cgggcctccgaggcggcgccggcggc 389 |||||||||| ||||||||||||||| Sbjct: 161 cgggcctccgcggcggcgccggcggc 186
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgctgcctc 160 ||||| |||||||||||||||||||| Sbjct: 1177035 gcggcggcggccgcggccgctgcctc 1177010
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 tggcggccgcggccgcggccgc 154 |||||||||||||||||||||| Sbjct: 1298108 tggcggccgcggccgcggccgc 1298087 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 1298086 ggcggccgcggccgcggccgc 1298106 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||||||||||||||| ||||| Sbjct: 25047171 ggcggccgcggccgcggcggctgc 25047194 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gccgcggccgctgcctcggcatcg 167 |||||||||||||||||| ||||| Sbjct: 4444127 gccgcggccgctgcctcgccatcg 4444150 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||||||||||||||| ||||| Sbjct: 3986920 ggcggccgcggccgcggctgctgc 3986943
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgctgcctc 160 |||||||||||||||||| ||||||| Sbjct: 3713253 gcggccgcggccgcggcctctgcctc 3713228 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gccgcggccgcggccgctgcctcg 161 |||||||||| ||||||||||||| Sbjct: 27222286 gccgcggccgaggccgctgcctcg 27222309 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 gccgcggccgcggccgctgcctcg 161 ||||||||||||||||| |||||| Sbjct: 22544011 gccgcggccgcggccgccgcctcg 22543988
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 117 gcgctggccctcggcctggcggccgcggccgcggccgc 154 |||||||| |||| | ||||||| |||||||||||||| Sbjct: 8365890 gcgctggcgctcgtcgtggcggcggcggccgcggccgc 8365853 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 ggccgcggccgcggccgctgc 157 ||||||||||||||||||||| Sbjct: 37880068 ggccgcggccgcggccgctgc 37880088 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 32244028 ggcggccgcggccgcggccgc 32244008 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 32244008 gcggccgcggccgcggccgc 32244027
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 117 gcgctggccctcggcctggcggccgcggccgcggccgc 154 |||||||| |||| | ||||||| |||||||||||||| Sbjct: 159821 gcgctggcgctcgtcgtggcggcggcggccgcggccgc 159784
>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0503G09 Length = 59843 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 117 gcgctggccctcggcctggcggccgcggccgcggccgc 154 |||||||| |||| | ||||||| |||||||||||||| Sbjct: 30516 gcgctggcgctcgtcgtggcggcggcggccgcggccgc 30479
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 cggcctggcggccgcggccgcg 149 |||||||||||||||||||||| Sbjct: 4235269 cggcctggcggccgcggccgcg 4235290
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 tggcggccgcggccgcggccgc 154 |||||||||||||||||||||| Sbjct: 62943 tggcggccgcggccgcggccgc 62922 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 62921 ggcggccgcggccgcggccgc 62941
>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G09 Length = 140067 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgctgcctc 160 |||||||||||||||||| ||||||| Sbjct: 53570 gcggccgcggccgcggcctctgcctc 53545
>ref|NM_211316.1| Eremothecium gossypii AFR414Wp (AFR414W), mRNA Length = 819 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgctgcctc 160 ||||| |||||||||||||||||||| Sbjct: 194 gcggcggcggccgcggccgctgcctc 169
>dbj|AK061562.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E02, full insert sequence Length = 938 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgctgcctc 160 |||||||||||||||||| ||||||| Sbjct: 152 gcggccgcggccgcggcctctgcctc 177
>gb|AF006492.1|AF006492 Mus musculus friend of GATA-1 (FOG) mRNA, complete cds Length = 3398 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 364 cgggcctccgaggcggcgccggcggc 389 |||||||||| ||||||||||||||| Sbjct: 161 cgggcctccgcggcggcgccggcggc 186
>gb|AY157846.2| Chlamydomonas reinhardtii putative nucleic acid binding protein (Nab1) gene, complete cds Length = 4339 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 tggcggccgcggccgcggccgc 154 |||||||||||||||||||||| Sbjct: 1324 tggcggccgcggccgcggccgc 1345 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 1345 gcggccgcggccgcggccgc 1326
>emb|AL591003.16| Mouse DNA sequence from clone RP23-354I24 on chromosome 13, complete sequence Length = 221647 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 364 cgggcctccgaggcggcgccggcggc 389 |||||||||| ||||||||||||||| Sbjct: 50155 cgggcctccgcggcggcgccggcggc 50180
>ref|NM_197471.1| Oryza sativa (japonica cultivar-group) putative disease resistance protein (OSJNBa0034L04.27), mRNA Length = 2214 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 gccgcggccgcggccgctgcc 158 ||||||||||||||||||||| Sbjct: 52 gccgcggccgcggccgctgcc 72
>ref|NM_191372.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1236 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 703 ggcggccgcggccgcggccgc 723 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 723 gcggccgcggccgcggccgc 704
>ref|XM_473259.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1965 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgcc 158 |||||||||||||||||| |||||| Sbjct: 222 ggcggccgcggccgcggctgctgcc 246
>gb|CP000147.1| Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequence Length = 100828 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgctgcctcggc 163 |||||||||||||||| ||| |||||||| Sbjct: 76874 gcggccgcggccgcgggcgcagcctcggc 76902
>ref|XM_366988.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG03064.4) partial mRNA Length = 3846 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgcctcgg 162 |||||||||||||||| |||| ||||||| Sbjct: 3789 ggcggccgcggccgcgaccgccgcctcgg 3817
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 128 cggcctggcggccgcggccgcggcc 152 ||||||||||||||||| ||||||| Sbjct: 2089886 cggcctggcggccgcgggcgcggcc 2089862 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 2085121 ggcggccgcggccgcggccgc 2085141 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 2085141 gcggccgcggccgcggccgc 2085122
>gb|BC111584.1| Homo sapiens SRY (sex determining region Y)-box 21, mRNA (cDNA clone MGC:133419 IMAGE:40080556), complete cds, with stop codon, in Gateway system Length = 885 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgcc 158 ||||||||||||||| ||||||||| Sbjct: 438 ggcggccgcggccgccgccgctgcc 462
>ref|XM_598665.2| PREDICTED: Bos taurus similar to Homeobox protein Hox-D13 (Hox-4.8) (LOC520424), mRNA Length = 975 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 gccgcggccgcggccgctgcc 158 ||||||||||||||||||||| Sbjct: 155 gccgcggccgcggccgctgcc 135
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 cttcccctcctcgccgcgctg 122 ||||||||||||||||||||| Sbjct: 717565 cttcccctcctcgccgcgctg 717545
>ref|XM_658261.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5749.2), mRNA Length = 1275 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 tcctcgccgcgctggccctcg 129 ||||||||||||||||||||| Sbjct: 14 tcctcgccgcgctggccctcg 34
>ref|NM_007084.2| Homo sapiens SRY (sex determining region Y)-box 21 (SOX21), mRNA Length = 2537 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgcc 158 ||||||||||||||| ||||||||| Sbjct: 494 ggcggccgcggccgccgccgctgcc 518
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgct 155 ||||||||||||||||||||| Sbjct: 7277696 gcggccgcggccgcggccgct 7277716 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 7277715 gcggccgcggccgcggccgc 7277696 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 cgaggcggcgccggcggcaa 391 |||||||||||||||||||| Sbjct: 2861945 cgaggcggcgccggcggcaa 2861964
>ref|XM_849979.1| PREDICTED: Canis familiaris similar to sine oculis homeobox homolog 5 (LOC612242), mRNA Length = 1761 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 cggccgcggccgcggccgctgcctc 160 ||||||||||||||||||| ||||| Sbjct: 217 cggccgcggccgcggccgccgcctc 193 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccg 153 |||||||||||||||||||| Sbjct: 198 ggcggccgcggccgcggccg 217
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 3050633 ggcggccgcggccgcggccgc 3050613 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 3050613 gcggccgcggccgcggccgc 3050632
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 4094107 ggcggccgcggccgcggccgc 4094087 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 4094087 gcggccgcggccgcggccgc 4094106
>emb|AL137061.12| Human DNA sequence from clone RP11-477B16 on chromosome 13 Contains the SOX21 gene for SRY (sex determining region Y)-box 21, a bromodomain containing 7 (BP75, NAG4, CELTIX1) (BRD7) pseudogene, a ribosomal protein L21 (RPL21) pseudogene and 2 CpG islands, complete sequence Length = 180538 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgcc 158 ||||||||||||||| ||||||||| Sbjct: 75093 ggcggccgcggccgccgccgctgcc 75069
>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete sequence Length = 148611 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 gccgcggccgcggccgctgcc 158 ||||||||||||||||||||| Sbjct: 86952 gccgcggccgcggccgctgcc 86972
>gb|AC134175.1| Drosophila pseudoobscura FOSMID DPSF1-548A9 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 45260 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgcctcgg 162 |||||| ||||||||||| |||||||||| Sbjct: 1325 ggcggctgcggccgcggcagctgcctcgg 1297
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgctgcct 159 |||||||||||||||||||| |||| Sbjct: 287312 gcggccgcggccgcggccgcggcct 287336 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 287331 gcggccgcggccgcggccgc 287312 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 136 cggccgcggccgcggccgctgcctcggc 163 ||||||||||||||||||| ||| |||| Sbjct: 287307 cggccgcggccgcggccgcggccgcggc 287334
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 306047 ggcggccgcggccgcggccgc 306067 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 306067 gcggccgcggccgcggccgc 306048
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgct 155 ||||||||||||||||||||| Sbjct: 28952 gcggccgcggccgcggccgct 28972 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 28971 gcggccgcggccgcggccgc 28952
>gb|AC116608.1| Papio hamadryas chromosome , clone RP41-155I24, complete sequence Length = 161654 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 gccgcggccgcggccgctgcc 158 ||||||||||||||||||||| Sbjct: 62687 gccgcggccgcggccgctgcc 62667
>gb|AF322136.1|AF322136 Sorghum australiense teosinte branched1 protein (tb1) gene, partial cds Length = 1068 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 351 ggcggccgcggccgcggccgc 371 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 371 gcggccgcggccgcggccgc 352
>gb|AF322135.1|AF322135 Sorghum matarakense teosinte branched1 protein (tb1) gene, partial cds Length = 1068 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 351 ggcggccgcggccgcggccgc 371 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 371 gcggccgcggccgcggccgc 352
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgcc 158 |||||||||||||||||| |||||| Sbjct: 26397047 ggcggccgcggccgcggctgctgcc 26397023 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ctccgaggcggcgccggcgg 388 |||||||||||||||||||| Sbjct: 16607221 ctccgaggcggcgccggcgg 16607240
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 gccgcggccgcggccgctgcc 158 ||||||||||||||||||||| Sbjct: 20021238 gccgcggccgcggccgctgcc 20021218
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgct 155 ||||||||||||||||||||| Sbjct: 7275591 gcggccgcggccgcggccgct 7275611 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 7275610 gcggccgcggccgcggccgc 7275591 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 cgaggcggcgccggcggcaa 391 |||||||||||||||||||| Sbjct: 2862056 cgaggcggcgccggcggcaa 2862075
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 114781 ggcggccgcggccgcggccgc 114761 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 114761 gcggccgcggccgcggccgc 114780
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 gccgcgctggccctcggcctggcgg 138 |||||||||||||||| |||||||| Sbjct: 7873115 gccgcgctggccctcgccctggcgg 7873091 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 cctcctcgccgcgctggccctcggc 131 ||||||||||||||| ||||||||| Sbjct: 4051205 cctcctcgccgcgctcgccctcggc 4051229
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 ggccgcggccgcggccgctgc 157 ||||||||||||||||||||| Sbjct: 101424 ggccgcggccgcggccgctgc 101444
>dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0612G07 Length = 182548 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 374 aggcggcgccggcggcaaggcggag 398 |||||||||||||||||||| |||| Sbjct: 101924 aggcggcgccggcggcaaggtggag 101900
>dbj|AK122075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118P13, full insert sequence Length = 1799 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgct 155 ||||||||||||||||||||| Sbjct: 308 gcggccgcggccgcggccgct 288 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 289 gcggccgcggccgcggccgc 308
>dbj|AB109208.1| Burkholderia glumae flgF, flgG, flgH, flgI, flgE genes for flagellar basal-body rod protein, flagellar basal-body rod protein, flagellar L-ring protein, flagellar P-ring protein, flagellar hook protein, partial and complete cds Length = 3967 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 cgccgcgctggccctcggcctggcg 137 ||||||||||||| ||||||||||| Sbjct: 2484 cgccgcgctggccgtcggcctggcg 2508
>dbj|AK110508.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-F10, full insert sequence Length = 2706 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 gccgcggccgcggccgctgcc 158 ||||||||||||||||||||| Sbjct: 73 gccgcggccgcggccgctgcc 93
>dbj|AK106246.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-D07, full insert sequence Length = 1499 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgc 154 ||||||||||||||||||||| Sbjct: 704 ggcggccgcggccgcggccgc 724 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 724 gcggccgcggccgcggccgc 705
>dbj|AK070991.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077I08, full insert sequence Length = 917 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 gccgcggccgcggccgctgcc 158 ||||||||||||||||||||| Sbjct: 800 gccgcggccgcggccgctgcc 820
>dbj|AK059494.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-H05, full insert sequence Length = 1809 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgct 155 ||||||||||||||||||||| Sbjct: 305 gcggccgcggccgcggccgct 285 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 286 gcggccgcggccgcggccgc 305
>gb|AF107044.1|AF107044 Homo sapiens clone pCL4 DNA-binding protein SOX21 (SOX21) gene, complete cds Length = 8372 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgcc 158 ||||||||||||||| ||||||||| Sbjct: 1574 ggcggccgcggccgccgccgctgcc 1598
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 gccgcggccgcggccgctgcc 158 ||||||||||||||||||||| Sbjct: 20032514 gccgcggccgcggccgctgcc 20032494
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgcc 158 |||||||||||||||||| |||||| Sbjct: 37680 ggcggccgcggccgcggctgctgcc 37656
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 ggccgcggccgcggccgctgc 157 ||||||||||||||||||||| Sbjct: 139316 ggccgcggccgcggccgctgc 139336
>ref|XM_482595.1| Oryza sativa (japonica cultivar-group), mRNA Length = 999 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 748 gcggccgcggccgcggccgc 767 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 767 gcggccgcggccgcggccgc 748
>ref|XM_528576.1| PREDICTED: Pan troglodytes similar to DMRT-like family A1 (LOC473206), mRNA Length = 1512 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||| ||||||||||||||||| Sbjct: 192 ggcggcggcggccgcggccgctgc 169
>ref|XM_479122.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1383 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||||||||||||||| ||||| Sbjct: 105 ggcggccgcggccgcggcggctgc 128
>ref|XM_476805.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1326 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||||||||||||||| ||||| Sbjct: 127 ggcggccgcggccgcggctgctgc 104
>ref|XM_472015.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1551 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ctccgaggcggcgccggcgg 388 |||||||||||||||||||| Sbjct: 117 ctccgaggcggcgccggcgg 98
>gb|BT018834.1| Zea mays clone EL01N0552D02.d mRNA sequence Length = 2172 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tggcggccgcggccgcggcc 152 |||||||||||||||||||| Sbjct: 144 tggcggccgcggccgcggcc 125
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ccgcggccgcggccgctgcc 158 |||||||||||||||||||| Sbjct: 211274 ccgcggccgcggccgctgcc 211293
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ggcggcgccggcggcaaggc 394 |||||||||||||||||||| Sbjct: 1987873 ggcggcgccggcggcaaggc 1987854
>ref|XM_367184.1| Magnaporthe grisea 70-15 hypothetical protein (MG07109.4) partial mRNA Length = 912 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gaggcggcgccggcggcaag 392 |||||||||||||||||||| Sbjct: 626 gaggcggcgccggcggcaag 645
>gb|AC144714.4| Mus musculus BAC clone RP24-371M20 from chromosome 8, complete sequence Length = 176994 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 gcggagggcagccccgcgcg 412 |||||||||||||||||||| Sbjct: 115280 gcggagggcagccccgcgcg 115299
>gb|DQ377804.1|DQ377804S1 Squirrelpox virus 1296/99, partial genome Length = 25260 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gccgcggccgctgcctcggc 163 |||||||||||||||||||| Sbjct: 23689 gccgcggccgctgcctcggc 23708
>gb|AY498874.1| Streptomyces lavendulae linear plasmid pSLV45 SLV.1 (SLV.1), SLV.1B (SLV.1B), SLV.2 (SLV.2), SLV.3 (SLV.3), SLV.4 (SLV.4), SLV.5 (SLV.5), SLV.6 (SLV.6), SLV.7, SLV.8, SLV.9 (SLV.9), SLV.10 (SLV.10), SLV.11 (SLV.11), SLV.12 (SLV.12), SLV.13 (SLV.13), SLV.14 (SLV.14), SLV.15 (SLV.15), SLV.16 (SLV.16), SLV.17 (SLV.17), SLV.18 (SLV.18), RegA (regA), TraSLVA (traSLVA), SLV.21 (SLV.21), ParSLV (parSLV), SLV.23 (SLV.23), SLV.24 (SLV.24), TpgSLV (tpgSLV), SLV.26 (SLV.26), SLV.27 (SLV.27), TraSLVB (traSLVB), SLV.29 (SLV.29), SLV.30 (SLV.30), TraSLR, SLV.32 (SLV.32), SLV.33 (SLV.33), SLV.34 (SLV.34), SLV.35 (SLV.35), SLV.36 (SLV.36), and SLV.37 (SLV.37) genes, complete cds Length = 41987 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 136 cggccgcggccgcggccgctgcctcggc 163 |||||||||||||||| | ||||||||| Sbjct: 28203 cggccgcggccgcggcggttgcctcggc 28230
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 cggcaagccgccgccgcgca 276 |||||||||||||||||||| Sbjct: 460572 cggcaagccgccgccgcgca 460591
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 atctgcgggccgggcctccg 373 |||||||||||||||||||| Sbjct: 2029366 atctgcgggccgggcctccg 2029385
>gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence Length = 398525 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gccgcggccgcggccgctgc 157 |||||||||||||||||||| Sbjct: 244775 gccgcggccgcggccgctgc 244794
>ref|NM_022160.1| Homo sapiens DMRT-like family A1 (DMRTA1), mRNA Length = 2300 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||| ||||||||||||||||| Sbjct: 417 ggcggcggcggccgcggccgctgc 394
>gb|AC073138.3| Homo sapiens BAC clone RP11-708P17 from 7, complete sequence Length = 118396 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gccgcgctggccctcggcct 133 |||||||||||||||||||| Sbjct: 37358 gccgcgctggccctcggcct 37377
>gb|AC113124.9| Mus musculus chromosome 19, clone RP23-350M1, complete sequence Length = 216547 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 gcggccgcggccgctgcctc 160 |||||||||||||||||||| Sbjct: 186583 gcggccgcggccgctgcctc 186564
>gb|AY313774.1| Mus musculus cytoplasmic polyadenylation element binding protein 3 (Cpeb3) mRNA, complete cds Length = 3148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcggccgcggccgctgcctc 160 |||||||||||||||||||| Sbjct: 763 gcggccgcggccgctgcctc 782
>gb|DQ174261.1| Streptomyces tsusimaensis strain ATCC 15141 putative conserved protein gene, partial cds; putative conserved protein, TetR-family regulatory protein, N5,N10-methylenetetrahydromethanopterin reductase, penicillin-binding protein, putative conserved protein, 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, putative conserved proteins, necrosis inducing factor, conserved membrane-associated protein, transcriptional regulator, putative conserved protein, and discrete type II thioesterase genes, complete cds; valinomycin biosynthesis gene cluster, complete sequence; putative transposase gene, complete cds; and unknown gene Length = 39345 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 113 cgccgcgctggccctcggcctggcggcc 140 ||||||||||| | |||||||||||||| Sbjct: 17611 cgccgcgctggtcttcggcctggcggcc 17638
>emb|AL161730.9| Human DNA sequence from clone RP11-441I5 on chromosome 9 Contains the DMRTA1 gene for DMRT-like family A1 (DMO) and a CpG island, complete sequence Length = 170066 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||| ||||||||||||||||| Sbjct: 127727 ggcggcggcggccgcggccgctgc 127704
>gb|AF352564.2| Pseudorabies virus immediate-early protein IE180 gene, complete cds Length = 6281 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 cctggcggccgcggccgcggccgc 154 ||||||||| |||||||||||||| Sbjct: 1348 cctggcggcggcggccgcggccgc 1371
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ggcggcgccggcggcaaggc 394 |||||||||||||||||||| Sbjct: 258794 ggcggcgccggcggcaaggc 258775
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tggcggccgcggccgcggcc 152 |||||||||||||||||||| Sbjct: 63 tggcggccgcggccgcggcc 44
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tggcggccgcggccgcggcc 152 |||||||||||||||||||| Sbjct: 262615 tggcggccgcggccgcggcc 262596
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 tggcggccgcggccgcggcc 152 |||||||||||||||||||| Sbjct: 287463 tggcggccgcggccgcggcc 287482
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccg 153 |||||||||||||||||||| Sbjct: 2178957 ggcggccgcggccgcggccg 2178938 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 cggcaagccgccgccgcgca 276 |||||||||||||||||||| Sbjct: 1779838 cggcaagccgccgccgcgca 1779857
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14 Length = 291050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ggcggcgccggcggcaaggc 394 |||||||||||||||||||| Sbjct: 66892 ggcggcgccggcggcaaggc 66873
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 gccgccgccgcgcagcccgc 282 |||||||||||||||||||| Sbjct: 242338 gccgccgccgcgcagcccgc 242319
>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02, complete sequence Length = 172435 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ctccgaggcggcgccggcgg 388 |||||||||||||||||||| Sbjct: 136455 ctccgaggcggcgccggcgg 136474
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 1288465 gcggccgcggccgcggccgc 1288446 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 1288446 gcggccgcggccgcggccgc 1288465
>emb|AJ720642.1| Gallus gallus mRNA for hypothetical protein, clone 22j23 Length = 2616 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 103 gcggccgcggccgcggccgc 84 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 84 gcggccgcggccgcggccgc 103 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 136 cggccgcggccgcggccgctgcctcggc 163 ||||||||||||||||||| ||| |||| Sbjct: 108 cggccgcggccgcggccgcggccgcggc 81
>dbj|AK096011.1| Homo sapiens cDNA FLJ38692 fis, clone KIDNE2001713, weakly similar to Oreochromis niloticus sex-determining protein DMO mRNA Length = 2300 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||| ||||||||||||||||| Sbjct: 417 ggcggcggcggccgcggccgctgc 394
>gb|AC148582.14| Gasterosteus aculeatus clone ch213-241e10, complete sequence Length = 209278 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||| ||||||||||||||||| Sbjct: 202221 ggcggctgcggccgcggccgctgc 202244
>gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, complete sequence Length = 176602 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 21174 gcggccgcggccgcggccgc 21193 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 21193 gcggccgcggccgcggccgc 21174
>gb|AC060232.6| Homo sapiens chromosome 10 clone RP11-458D17, complete sequence Length = 167912 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||| ||||||||||||||||| Sbjct: 125573 ggcggcggcggccgcggccgctgc 125550
>dbj|AK147243.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1001J07 product:cytoplasmic polyadenylation element binding protein 3, full insert sequence Length = 5660 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcggccgcggccgctgcctc 160 |||||||||||||||||||| Sbjct: 1231 gcggccgcggccgctgcctc 1250
>dbj|AK161513.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933430J08 product:cytoplasmic polyadenylation element binding protein 3, full insert sequence Length = 2097 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcggccgcggccgctgcctc 160 |||||||||||||||||||| Sbjct: 917 gcggccgcggccgctgcctc 936
>dbj|AK029261.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831444O18 product:KIAA0940 PROTEIN homolog [Homo sapiens], full insert sequence Length = 2411 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcggccgcggccgctgcctc 160 |||||||||||||||||||| Sbjct: 823 gcggccgcggccgctgcctc 842
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 cctcgccgcgctggccctcggcct 133 ||||||||||||||| |||||||| Sbjct: 3817354 cctcgccgcgctggcgctcggcct 3817377
>dbj|AK044639.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930029D04 product:KIAA0940 PROTEIN homolog [Homo sapiens], full insert sequence Length = 4223 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcggccgcggccgctgcctc 160 |||||||||||||||||||| Sbjct: 943 gcggccgcggccgctgcctc 962
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence Length = 129838 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||||||||||||||| ||||| Sbjct: 41982 ggcggccgcggccgcggcggctgc 41959
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cggcaagccgccgccgcgca 276 |||||||||||||||||||| Sbjct: 1004116 cggcaagccgccgccgcgca 1004097
>gb|AF357166.1|AF357166 Mycobacterium tuberculosis isolate DS6 unknown sequence Length = 9547 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ggcggcgccggcggcaaggc 394 |||||||||||||||||||| Sbjct: 994 ggcggcgccggcggcaaggc 975
>ref|XM_394737.2| PREDICTED: Apis mellifera similar to GA20013-PA (LOC411264), mRNA Length = 3327 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 gccgcggccgcggccgctgc 157 |||||||||||||||||||| Sbjct: 3011 gccgcggccgcggccgctgc 2992
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gccgccgccgcgcagcccgc 282 |||||||||||||||||||| Sbjct: 71764 gccgccgccgcgcagcccgc 71783
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccg 153 |||||||||||||||||||| Sbjct: 3954983 ggcggccgcggccgcggccg 3954964 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gccgccgccgcgcagcccgc 282 |||||||||||||||||||| Sbjct: 3353079 gccgccgccgcgcagcccgc 3353098
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 cgaggcggcgccggcggcaa 391 |||||||||||||||||||| Sbjct: 133901 cgaggcggcgccggcggcaa 133920
>dbj|AP005800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016D04 Length = 147313 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 gccgcggccgcggccgctgcctcg 161 ||||||||||||||||| |||||| Sbjct: 114367 gccgcggccgcggccgccgcctcg 114344
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gccgcggccgctgcctcggcatcg 167 |||||||||||||||||| ||||| Sbjct: 22846 gccgcggccgctgcctcgccatcg 22869
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gccgcggccgcggccgctgcctcg 161 |||||||||| ||||||||||||| Sbjct: 118735 gccgcggccgaggccgctgcctcg 118758
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gccgcggccgcggccgctgcctcg 161 |||||||||| ||||||||||||| Sbjct: 72957 gccgcggccgaggccgctgcctcg 72980
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 gcggcgccggcggcaaggcg 395 |||||||||||||||||||| Sbjct: 3062040 gcggcgccggcggcaaggcg 3062021
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tcgccgcgctggccctcggc 131 |||||||||||||||||||| Sbjct: 5927707 tcgccgcgctggccctcggc 5927726 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ccgcggccgcggccgctgcc 158 |||||||||||||||||||| Sbjct: 5079421 ccgcggccgcggccgctgcc 5079440 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gcgctggccctcggcctggc 136 |||||||||||||||||||| Sbjct: 5002129 gcgctggccctcggcctggc 5002110 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 cctggcggccgcggccgcggccgc 154 |||||||||||| ||||||||||| Sbjct: 2589618 cctggcggccgccgccgcggccgc 2589595
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02 Length = 106742 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gccgcggccgctgcctcggcatcg 167 |||||||||||||||||| ||||| Sbjct: 83976 gccgcggccgctgcctcgccatcg 83999
>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018L13 Length = 131155 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||||||||||||||| ||||| Sbjct: 87851 ggcggccgcggccgcggcggctgc 87874
>dbj|AP003843.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1656_E11 Length = 116211 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||||||||||||||| ||||| Sbjct: 89646 ggcggccgcggccgcggctgctgc 89669
>dbj|AP006274.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-217F13, chromosome 3, complete sequence Length = 178968 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gtgtgcatgcagagcctgtc 250 |||||||||||||||||||| Sbjct: 156151 gtgtgcatgcagagcctgtc 156170
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 140312 gcggccgcggccgcggccgc 140293 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 140293 gcggccgcggccgcggccgc 140312
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 13960 gcggccgcggccgcggccgc 13941 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 13941 gcggccgcggccgcggccgc 13960
>ref|XM_312014.2| Anopheles gambiae str. PEST ENSANGP00000018709 (ENSANGG00000016220), partial mRNA Length = 1299 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 136 cggccgcggccgcggccgctgcctcggc 163 |||| ||||| ||||||||||||||||| Sbjct: 953 cggcggcggcggcggccgctgcctcggc 980
>ref|NM_001012894.1| Gallus gallus SMYD family member 5 (SMYD5), mRNA Length = 2616 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 103 gcggccgcggccgcggccgc 84 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcggccgcggccgcggccgc 154 |||||||||||||||||||| Sbjct: 84 gcggccgcggccgcggccgc 103 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 136 cggccgcggccgcggccgctgcctcggc 163 ||||||||||||||||||| ||| |||| Sbjct: 108 cggccgcggccgcggccgcggccgcggc 81
>dbj|AK102660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101I16, full insert sequence Length = 1593 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||||||||||||||| ||||| Sbjct: 110 ggcggccgcggccgcggctgctgc 87
>dbj|AK070875.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075H05, full insert sequence Length = 1898 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 cgaggcggcgccggcggcaa 391 |||||||||||||||||||| Sbjct: 1337 cgaggcggcgccggcggcaa 1356
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cggccgctgcctcggcatcg 167 |||||||||||||||||||| Sbjct: 2182109 cggccgctgcctcggcatcg 2182128
>dbj|AK064387.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-E11, full insert sequence Length = 1799 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||||||||||||||| ||||| Sbjct: 112 ggcggccgcggccgcggctgctgc 89
>tpe|BN000565.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx36 gene for class III peroxidase 36 precursor, exons 1-2 Length = 1564 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 cgaggcggcgccggcggcaa 391 |||||||||||||||||||| Sbjct: 1417 cgaggcggcgccggcggcaa 1436
>dbj|AB093274.1| Mus musculus mRNA for mKIAA0940 protein Length = 5310 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcggccgcggccgctgcctc 160 |||||||||||||||||||| Sbjct: 870 gcggccgcggccgctgcctc 889
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 cggcaagccgccgccgcgca 276 |||||||||||||||||||| Sbjct: 2563228 cggcaagccgccgccgcgca 2563247
>ref|NM_198300.2| Mus musculus cytoplasmic polyadenylation element binding protein 3 (Cpeb3), mRNA Length = 5792 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcggccgcggccgctgcctc 160 |||||||||||||||||||| Sbjct: 763 gcggccgcggccgctgcctc 782
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ggcggccgcggccgcggccgctgc 157 |||||||| ||||||||||||||| Sbjct: 1674255 ggcggccggggccgcggccgctgc 1674232
>gb|AC161238.7| Mus musculus chromosome 19, clone RP24-288C19, complete sequence Length = 193445 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcggccgcggccgctgcctc 160 |||||||||||||||||||| Sbjct: 171874 gcggccgcggccgctgcctc 171893 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,996,719 Number of Sequences: 3902068 Number of extensions: 2996719 Number of successful extensions: 81778 Number of sequences better than 10.0: 163 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73189 Number of HSP's gapped (non-prelim): 8463 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
