ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast56h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MFS18_MAIZE (P32439) MFS18 protein precursor 42 6e-04
2NOS3_PIG (Q28969) Nitric-oxide synthase, endothelial (EC 1.14.13... 29 5.2

>MFS18_MAIZE (P32439) MFS18 protein precursor|
          Length = 128

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 25/52 (48%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 96  MEKSTKMXXXXXXXXXXXXTG-AEARNIKTTEAAAASKDAVLQPTTFPPFDR 248
           M +S+KM               AEARNIKTT       DAV+QP TFPPFDR
Sbjct: 1   MARSSKMMVAARLLALALAVSTAEARNIKTT-TTEKKDDAVVQPQTFPPFDR 51



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>NOS3_PIG (Q28969) Nitric-oxide synthase, endothelial (EC 1.14.13.39)|
           (EC-NOS) (NOS type III) (NOSIII) (Endothelial NOS)
           (eNOS) (Constitutive NOS) (cNOS)
          Length = 1204

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 273 PTPPTRRLSGRTAERSLAGGPRPCW 199
           PTPPT  +     E+   GGP P W
Sbjct: 821 PTPPTESVGVEQLEKGSPGGPPPSW 845


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.121    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,182,446
Number of Sequences: 219361
Number of extensions: 281527
Number of successful extensions: 836
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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