ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast56h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 58 9e-09
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 57 3e-08
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 40 0.002
4SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1)... 38 0.010
5EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 34 0.14
6MUTS_WOLPM (P61673) DNA mismatch repair protein mutS 30 3.5
7ZN326_MOUSE (O88291) Zinc finger protein 326 (Zinc finger protei... 30 3.5
8PPAV_CAEEL (Q09448) Putative acid phosphatase C05C10.1 (EC 3.1.3.2) 28 7.7

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 58.2 bits (139), Expect = 9e-09
 Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = +1

Query: 271 VPCYFIFGDSLVDNGNNNYIVSLARANYPPYGIDF-AGGPSGRFTNGLTTVDVIAQLL 441
           +P  F FGDS+ D GNNN + +  + NY PYG+DF  G  +GRF+NG    D I++ L
Sbjct: 123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYL 180



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = +1

Query: 271 VPCYFIFGDSLVDNGNNNYIVSLARANYPPYGIDFA-GGPSGRFTNGLTTVDVIAQLL 441
           +P  F FGDS+ D GNNN + +  ++NY PYG+DF     +GRF+NG+   D +A+ +
Sbjct: 202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYM 259



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 22/56 (39%), Positives = 29/56 (51%)
 Frame = +1

Query: 274 PCYFIFGDSLVDNGNNNYIVSLARANYPPYGIDFAGGPSGRFTNGLTTVDVIAQLL 441
           P  F FGDS  D G  +     A    PP+G  F G P+GR+ +G   +D IA+ L
Sbjct: 29  PAIFNFGDSNSDTGGLSAAFGQAG---PPHGSSFFGSPAGRYCDGRLVIDFIAESL 81



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>SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1) (Fragment)|
          Length = 18

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +1

Query: 262 DPQVPCYFIFGDSLVDNG 315
           DPQVP YFIFGDSL DNG
Sbjct: 1   DPQVPXYFIFGDSLYDNG 18



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +1

Query: 274 PCYFIFGDSLVDNGNNNYIVSLARANYP---PYGIDFAGGPSGRFTNGLTTVDVIAQ 435
           P  F FGDS  D G        A A YP   PYG  F    +GR+++G   +D IA+
Sbjct: 33  PAIFNFGDSNSDTGGK------AAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIAE 83



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>MUTS_WOLPM (P61673) DNA mismatch repair protein mutS|
          Length = 849

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +1

Query: 286 IFGDSLVDNGNNNYIVSLARANYPPYGIDFAGGPSGRFTNGLTTVDVI 429
           I  DSL+++ +NNY+ S+   N   Y I +    +G+F + LT++  +
Sbjct: 140 IIEDSLLEDKSNNYLASIVEQN-DEYAISWLELSTGKFFHTLTSLKAL 186



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>ZN326_MOUSE (O88291) Zinc finger protein 326 (Zinc finger protein-associated|
           with nuclear matrix of 75 kDa)
          Length = 580

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -1

Query: 426 DVDGGEAVGEAPGRAAGEVDAVGRVVGARQGHD 328
           DV+G E   EA   AAGE DAVG   GA +  +
Sbjct: 522 DVEGEEGTAEAA--AAGEADAVGEAEGAGEAEE 552



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>PPAV_CAEEL (Q09448) Putative acid phosphatase C05C10.1 (EC 3.1.3.2)|
          Length = 471

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 429 DDVDGGEAVGEAPGRAAGEVDAVGRVVGAR 340
           D V GG  +GE  GR  GE++ +GR++  R
Sbjct: 20  DWVFGGGGLGELTGRGMGEMNNLGRLIRER 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,125,252
Number of Sequences: 219361
Number of extensions: 541134
Number of successful extensions: 1572
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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