ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast56g06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464070.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2085 Score = 436 bits (220), Expect = e-119 Identities = 370/420 (88%) Strand = Plus / Plus Query: 16 ccccatccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaacag 75 ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 651 ccccatcccggccaacctcggcaactcgccggcgagcgtcgtcgtgctcgcgcacaacaa 710 Query: 76 gctcggcgggtgcatcccgccctccatcgggaagatggcggagacgctcaacgagatcgt 135 ||||| || ||||||||||| |||||||| ||||||||||| ||||||||||||||||| Sbjct: 711 cctcgggggatgcatcccgccgtccatcggcaagatggcggacacgctcaacgagatcgt 770 Query: 136 gctcatcgacgaccagctcaccggctgcatcccgccgcaggtcgggctgctcaagaaggt 195 |||||||| |||| |||||||||||||| |||| ||||||| |||||||||| |||||| Sbjct: 771 gctcatcgccgacgagctcaccggctgcgtccccacgcaggtggggctgctcaggaaggt 830 Query: 196 gacggtgtttgatgtcagcgggaaccggctacagggggcgctccccgcggccatcggcgg 255 ||||||||| || ||||||| |||| || ||||| || |||| ||| | | | ||| Sbjct: 831 gacggtgttcgacgtcagcgacaaccacctgcagggcccgatcccggcgagcgttgccgg 890 Query: 256 gatggccgccgtcgaggagctcgtcgtcgccgggaacctcttcgagggcgccgtgccggc 315 |||||||||||||||| |||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 891 gatggccgccgtcgagcagctcgacgtcgccaggaacctcttcgagggggccgtgccggc 950 Query: 316 cgccgtctgcggcctcgccgggctcaagaacttcacctacaccgacaacttcatcacctc 375 || |||||||||||||||| | |||||||||||||||||||| ||||||||||||||||| Sbjct: 951 cggcgtctgcggcctcgccagcctcaagaacttcacctacacggacaacttcatcacctc 1010 Query: 376 gcgcccgagctgcaagcaggccaccgccgacggcgcgtggaactgcatctccggcgcgcc 435 ||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1011 gcgcccgggctgcggcgtggccaccgccgacggcgtgtggaactgcatccccggcgcgcc 1070
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 436 bits (220), Expect = e-119 Identities = 370/420 (88%) Strand = Plus / Minus Query: 16 ccccatccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaacag 75 ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2022655 ccccatcccggccaacctcggcaactcgccggcgagcgtcgtcgtgctcgcgcacaacaa 2022596 Query: 76 gctcggcgggtgcatcccgccctccatcgggaagatggcggagacgctcaacgagatcgt 135 ||||| || ||||||||||| |||||||| ||||||||||| ||||||||||||||||| Sbjct: 2022595 cctcgggggatgcatcccgccgtccatcggcaagatggcggacacgctcaacgagatcgt 2022536 Query: 136 gctcatcgacgaccagctcaccggctgcatcccgccgcaggtcgggctgctcaagaaggt 195 |||||||| |||| |||||||||||||| |||| ||||||| |||||||||| |||||| Sbjct: 2022535 gctcatcgccgacgagctcaccggctgcgtccccacgcaggtggggctgctcaggaaggt 2022476 Query: 196 gacggtgtttgatgtcagcgggaaccggctacagggggcgctccccgcggccatcggcgg 255 ||||||||| || ||||||| |||| || ||||| || |||| ||| | | | ||| Sbjct: 2022475 gacggtgttcgacgtcagcgacaaccacctgcagggcccgatcccggcgagcgttgccgg 2022416 Query: 256 gatggccgccgtcgaggagctcgtcgtcgccgggaacctcttcgagggcgccgtgccggc 315 |||||||||||||||| |||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 2022415 gatggccgccgtcgagcagctcgacgtcgccaggaacctcttcgagggggccgtgccggc 2022356 Query: 316 cgccgtctgcggcctcgccgggctcaagaacttcacctacaccgacaacttcatcacctc 375 || |||||||||||||||| | |||||||||||||||||||| ||||||||||||||||| Sbjct: 2022355 cggcgtctgcggcctcgccagcctcaagaacttcacctacacggacaacttcatcacctc 2022296 Query: 376 gcgcccgagctgcaagcaggccaccgccgacggcgcgtggaactgcatctccggcgcgcc 435 ||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2022295 gcgcccgggctgcggcgtggccaccgccgacggcgtgtggaactgcatccccggcgcgcc 2022236 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 151 gctcaccggctgcatcccgccgcaggtcg 179 |||||||||| ||||||||||||||||| Sbjct: 26072106 gctcaccggcgccatcccgccgcaggtcg 26072078
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 436 bits (220), Expect = e-119 Identities = 370/420 (88%) Strand = Plus / Minus Query: 16 ccccatccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaacag 75 ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 72863 ccccatcccggccaacctcggcaactcgccggcgagcgtcgtcgtgctcgcgcacaacaa 72804 Query: 76 gctcggcgggtgcatcccgccctccatcgggaagatggcggagacgctcaacgagatcgt 135 ||||| || ||||||||||| |||||||| ||||||||||| ||||||||||||||||| Sbjct: 72803 cctcgggggatgcatcccgccgtccatcggcaagatggcggacacgctcaacgagatcgt 72744 Query: 136 gctcatcgacgaccagctcaccggctgcatcccgccgcaggtcgggctgctcaagaaggt 195 |||||||| |||| |||||||||||||| |||| ||||||| |||||||||| |||||| Sbjct: 72743 gctcatcgccgacgagctcaccggctgcgtccccacgcaggtggggctgctcaggaaggt 72684 Query: 196 gacggtgtttgatgtcagcgggaaccggctacagggggcgctccccgcggccatcggcgg 255 ||||||||| || ||||||| |||| || ||||| || |||| ||| | | | ||| Sbjct: 72683 gacggtgttcgacgtcagcgacaaccacctgcagggcccgatcccggcgagcgttgccgg 72624 Query: 256 gatggccgccgtcgaggagctcgtcgtcgccgggaacctcttcgagggcgccgtgccggc 315 |||||||||||||||| |||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 72623 gatggccgccgtcgagcagctcgacgtcgccaggaacctcttcgagggggccgtgccggc 72564 Query: 316 cgccgtctgcggcctcgccgggctcaagaacttcacctacaccgacaacttcatcacctc 375 || |||||||||||||||| | |||||||||||||||||||| ||||||||||||||||| Sbjct: 72563 cggcgtctgcggcctcgccagcctcaagaacttcacctacacggacaacttcatcacctc 72504 Query: 376 gcgcccgagctgcaagcaggccaccgccgacggcgcgtggaactgcatctccggcgcgcc 435 ||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 72503 gcgcccgggctgcggcgtggccaccgccgacggcgtgtggaactgcatccccggcgcgcc 72444
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 305 bits (154), Expect = 6e-80 Identities = 265/302 (87%) Strand = Plus / Plus Query: 14 cgccccatccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaac 73 ||||||||||| |||||||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 29239238 cgccccatcccgcccaacctcgggagctcgccggcgtccgtcgtcgtgctcgcgcacaac 29239297 Query: 74 aggctcggcgggtgcatcccgccctccatcgggaagatggcggagacgctcaacgagatc 133 | ||||| || ||||||||||| |||||||||| |||||| |||||||||||||| ||| Sbjct: 29239298 cgcctcgggggttgcatcccgccgtccatcgggaggatggccgagacgctcaacgaaatc 29239357 Query: 134 gtgctcatcgacgaccagctcaccggctgcatcccgccgcaggtcgggctgctcaagaag 193 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 29239358 gtgctcatcgacgacgagctcaccggatgcatcccgccgcaggtcgggctgctcaggaag 29239417 Query: 194 gtgacggtgtttgatgtcagcgggaaccggctacagggggcgctccccgcggccatcggc 253 ||||||||||| || |||||||| |||| || ||||| |||| |||| | | ||| | Sbjct: 29239418 gtgacggtgttcgacgtcagcggcaaccacctccagggcccgcttcccgggagcgtcgcc 29239477 Query: 254 gggatggccgccgtcgaggagctcgtcgtcgccgggaacctcttcgagggcgccgtgccg 313 || |||||||||||||| |||||| ||||||||||||||||||||| ||| | |||||| Sbjct: 29239478 ggcttggccgccgtcgagcagctcgacgtcgccgggaacctcttcgaaggcccggtgccg 29239537 Query: 314 gc 315 || Sbjct: 29239538 gc 29239539 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 cgaggagctcgtcgtcgccgg 288 ||||||||||||||||||||| Sbjct: 23347939 cgaggagctcgtcgtcgccgg 23347919
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 305 bits (154), Expect = 6e-80 Identities = 265/302 (87%) Strand = Plus / Plus Query: 14 cgccccatccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaac 73 ||||||||||| |||||||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 2036 cgccccatcccgcccaacctcgggagctcgccggcgtccgtcgtcgtgctcgcgcacaac 2095 Query: 74 aggctcggcgggtgcatcccgccctccatcgggaagatggcggagacgctcaacgagatc 133 | ||||| || ||||||||||| |||||||||| |||||| |||||||||||||| ||| Sbjct: 2096 cgcctcgggggttgcatcccgccgtccatcgggaggatggccgagacgctcaacgaaatc 2155 Query: 134 gtgctcatcgacgaccagctcaccggctgcatcccgccgcaggtcgggctgctcaagaag 193 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 2156 gtgctcatcgacgacgagctcaccggatgcatcccgccgcaggtcgggctgctcaggaag 2215 Query: 194 gtgacggtgtttgatgtcagcgggaaccggctacagggggcgctccccgcggccatcggc 253 ||||||||||| || |||||||| |||| || ||||| |||| |||| | | ||| | Sbjct: 2216 gtgacggtgttcgacgtcagcggcaaccacctccagggcccgcttcccgggagcgtcgcc 2275 Query: 254 gggatggccgccgtcgaggagctcgtcgtcgccgggaacctcttcgagggcgccgtgccg 313 || |||||||||||||| |||||| ||||||||||||||||||||| ||| | |||||| Sbjct: 2276 ggcttggccgccgtcgagcagctcgacgtcgccgggaacctcttcgaaggcccggtgccg 2335 Query: 314 gc 315 || Sbjct: 2336 gc 2337
>dbj|AK105531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G10, full insert sequence Length = 1447 Score = 297 bits (150), Expect = 2e-77 Identities = 264/302 (87%) Strand = Plus / Plus Query: 14 cgccccatccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaac 73 ||||||||||| |||||||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 209 cgccccatcccgcccaacctcgggagctcgccggcgtccgtcgtcgtgctcgcgcacaac 268 Query: 74 aggctcggcgggtgcatcccgccctccatcgggaagatggcggagacgctcaacgagatc 133 | ||||| || ||||||||||| |||||||||| |||||| |||||||||||||| ||| Sbjct: 269 cgcctcgggggttgcatcccgccgtccatcgggaggatggccgagacgctcaacgaaatc 328 Query: 134 gtgctcatcgacgaccagctcaccggctgcatcccgccgcaggtcgggctgctcaagaag 193 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 329 gtgctcatcgacgacgagctcaccggatgcatcccgccgcaggtcgggctgctcaggaag 388 Query: 194 gtgacggtgtttgatgtcagcgggaaccggctacagggggcgctccccgcggccatcggc 253 ||||||||||| || |||||||| |||| || ||||| |||| |||| | | ||| | Sbjct: 389 gtgacggtgttcgacgtcagcggcaaccacctccagggcccgcttcccgggagcgtcgcc 448 Query: 254 gggatggccgccgtcgaggagctcgtcgtcgccgggaacctcttcgagggcgccgtgccg 313 || |||||||||||||| |||||| |||||||||||||||| |||| ||| | |||||| Sbjct: 449 ggcttggccgccgtcgagcagctcgacgtcgccgggaacctcgtcgaaggcccggtgccg 508 Query: 314 gc 315 || Sbjct: 509 gc 510
>ref|XM_550392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2207 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 28 caacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaacaggctcggcgggtg 87 |||| ||||||||||||||| ||||||| |||| |||||||||||||| ||||||| || Sbjct: 729 caacttcggcaactcgccggtctccgtcatcgtcctcgcgcacaacagcttcggcggctg 788 Query: 88 catcccgccctccatcgggaagatggcggagacgctcaacgagatcgtgctcatc 142 | ||||| | | |||| || ||| | | |||||||||||||||| |||||||| Sbjct: 789 cctcccggcgagcctcggcaacatgtccgggacgctcaacgagatcttgctcatc 843
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 28 caacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaacaggctcggcgggtg 87 |||| ||||||||||||||| ||||||| |||| |||||||||||||| ||||||| || Sbjct: 4179685 caacttcggcaactcgccggtctccgtcatcgtcctcgcgcacaacagcttcggcggctg 4179626 Query: 88 catcccgccctccatcgggaagatggcggagacgctcaacgagatcgtgctcatc 142 | ||||| | | |||| || ||| | | |||||||||||||||| |||||||| Sbjct: 4179625 cctcccggcgagcctcggcaacatgtccgggacgctcaacgagatcttgctcatc 4179571 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 20 atccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgc 66 ||||||| |||| |||||||||||||||| ||||| |||||||||| Sbjct: 23282092 atccccgacaacgtcggcaactcgccggcgtccgtgctcgtgctcgc 23282138 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 342 agaacttcacctacaccgacaacttcatcacc 373 |||||||||||||| || |||||||||||||| Sbjct: 23282414 agaacttcacctactcctacaacttcatcacc 23282445 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 77 ctcggcgggtgcatcccgccctccatcgg 105 |||||||| |||||||||||| ||||||| Sbjct: 14421745 ctcggcggctgcatcccgcccaccatcgg 14421717 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccgtcgaggagctcgtcgtc 283 |||||||||||||||||||| Sbjct: 10700180 ccgtcgaggagctcgtcgtc 10700161
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 28 caacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaacaggctcggcgggtg 87 |||| ||||||||||||||| ||||||| |||| |||||||||||||| ||||||| || Sbjct: 17652 caacttcggcaactcgccggtctccgtcatcgtcctcgcgcacaacagcttcggcggctg 17593 Query: 88 catcccgccctccatcgggaagatggcggagacgctcaacgagatcgtgctcatc 142 | ||||| | | |||| || ||| | | |||||||||||||||| |||||||| Sbjct: 17592 cctcccggcgagcctcggcaacatgtccgggacgctcaacgagatcttgctcatc 17538
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 28 caacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaacaggctcggcgggtg 87 |||| ||||||||||||||| ||||||| |||| |||||||||||||| ||||||| || Sbjct: 126656 caacttcggcaactcgccggtctccgtcatcgtcctcgcgcacaacagcttcggcggctg 126597 Query: 88 catcccgccctccatcgggaagatggcggagacgctcaacgagatcgtgctcatc 142 | ||||| | | |||| || ||| | | |||||||||||||||| |||||||| Sbjct: 126596 cctcccggcgagcctcggcaacatgtccgggacgctcaacgagatcttgctcatc 126542
>dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A11, full insert sequence Length = 2207 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 28 caacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaacaggctcggcgggtg 87 |||| ||||||||||||||| ||||||| |||| |||||||||||||| ||||||| || Sbjct: 729 caacttcggcaactcgccggtctccgtcatcgtcctcgcgcacaacagcttcggcggctg 788 Query: 88 catcccgccctccatcgggaagatggcggagacgctcaacgagatcgtgctcatc 142 | ||||| | | |||| || ||| | | |||||||||||||||| |||||||| Sbjct: 789 cctcccggcgagcctcggcaacatgtccgggacgctcaacgagatcttgctcatc 843
>ref|XM_476821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1301 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 21 tccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaacaggctcg 80 |||| ||||||||||||||||||||||| || ||| |||||||||| ||| || ||| Sbjct: 660 tcccggccaacctcggcaactcgccggcgtcggtcatcgtgctcgccaacatcaagctga 719 Query: 81 gcgggtgcatcccgccctccatcgggaagatggcggagacgctcaacgagatcgt 135 | || |||||||| || | |||||| |||||||| |||||| |||||| |||| Sbjct: 720 ggggttgcatcccctccagcgtcgggaggatggcggcgacgctgaacgagctcgt 774
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 21 tccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaacaggctcg 80 |||| ||||||||||||||||||||||| || ||| |||||||||| ||| || ||| Sbjct: 4062346 tcccggccaacctcggcaactcgccggcgtcggtcatcgtgctcgccaacatcaagctga 4062287 Query: 81 gcgggtgcatcccgccctccatcgggaagatggcggagacgctcaacgagatcgt 135 | || |||||||| || | |||||| |||||||| |||||| |||||| |||| Sbjct: 4062286 ggggttgcatcccctccagcgtcgggaggatggcggcgacgctgaacgagctcgt 4062232 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cgccgtcgaggagctcgtcg 281 |||||||||||||||||||| Sbjct: 26674644 cgccgtcgaggagctcgtcg 26674625 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtcgaggagctcgtcgtc 283 |||||||||||||||||||| Sbjct: 3135909 ccgtcgaggagctcgtcgtc 3135928 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtcgaggagctcgtcgtc 283 |||||||||||||||||||| Sbjct: 3091075 ccgtcgaggagctcgtcgtc 3091094 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtcgaggagctcgtcgtc 283 |||||||||||||||||||| Sbjct: 3045831 ccgtcgaggagctcgtcgtc 3045850
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 21 tccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaacaggctcg 80 |||| ||||||||||||||||||||||| || ||| |||||||||| ||| || ||| Sbjct: 55204 tcccggccaacctcggcaactcgccggcgtcggtcatcgtgctcgccaacatcaagctga 55145 Query: 81 gcgggtgcatcccgccctccatcgggaagatggcggagacgctcaacgagatcgt 135 | || |||||||| || | |||||| |||||||| |||||| |||||| |||| Sbjct: 55144 ggggttgcatcccctccagcgtcgggaggatggcggcgacgctgaacgagctcgt 55090
>dbj|AK062887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D11, full insert sequence Length = 1302 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 21 tccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgcgcacaacaggctcg 80 |||| ||||||||||||||||||||||| || ||| |||||||||| ||| || ||| Sbjct: 660 tcccggccaacctcggcaactcgccggcgtcggtcatcgtgctcgccaacatcaagctga 719 Query: 81 gcgggtgcatcccgccctccatcgggaagatggcggagacgctcaacgagatcgt 135 | || |||||||| || | |||||| |||||||| |||||| |||||| |||| Sbjct: 720 ggggttgcatcccctccagcgtcgggaggatggcggcgacgctgaacgagctcgt 774
>ref|NM_192605.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1713 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 20 atccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgc 66 ||||||| |||| |||||||||||||||| ||||| |||||||||| Sbjct: 685 atccccgacaacgtcggcaactcgccggcgtccgtgctcgtgctcgc 731 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 342 agaacttcacctacaccgacaacttcatcacc 373 |||||||||||||| || |||||||||||||| Sbjct: 1007 agaacttcacctactcctacaacttcatcacc 1038
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 20 atccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgc 66 ||||||| |||| |||||||||||||||| ||||| |||||||||| Sbjct: 7790 atccccgacaacgtcggcaactcgccggcgtccgtgctcgtgctcgc 7836 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 342 agaacttcacctacaccgacaacttcatcacc 373 |||||||||||||| || |||||||||||||| Sbjct: 8112 agaacttcacctactcctacaacttcatcacc 8143
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 20 atccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgc 66 ||||||| |||| |||||||||||||||| ||||| |||||||||| Sbjct: 68834 atccccgacaacgtcggcaactcgccggcgtccgtgctcgtgctcgc 68880 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 342 agaacttcacctacaccgacaacttcatcacc 373 |||||||||||||| || |||||||||||||| Sbjct: 69156 agaacttcacctactcctacaacttcatcacc 69187
>dbj|AK105670.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A04, full insert sequence Length = 1985 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 20 atccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgc 66 ||||||| |||| |||||||||||||||| ||||| |||||||||| Sbjct: 744 atccccgacaacgtcggcaactcgccggcgtccgtgctcgtgctcgc 790 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 342 agaacttcacctacaccgacaacttcatcacc 373 |||||||||||||| || |||||||||||||| Sbjct: 1066 agaacttcacctactcctacaacttcatcacc 1097
>dbj|AK105266.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D06, full insert sequence Length = 2042 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 20 atccccgccaacctcggcaactcgccggcctccgtcgtcgtgctcgc 66 ||||||| |||| |||||||||||||||| ||||| |||||||||| Sbjct: 743 atccccgacaacgtcggcaactcgccggcgtccgtgctcgtgctcgc 789 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 342 agaacttcacctacaccgacaacttcatcacc 373 |||||||||||||| || |||||||||||||| Sbjct: 1065 agaacttcacctactcctacaacttcatcacc 1096
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 28 caacctcggcaactcgccggcctccgtc 55 |||||||||| ||||||||||||||||| Sbjct: 1357859 caacctcggcgactcgccggcctccgtc 1357832
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 128 gagatcgtgctcatcgacgaccagctc 154 ||||||||||||| ||||||||||||| Sbjct: 1101900 gagatcgtgctcagcgacgaccagctc 1101874
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 128 gagatcgtgctcatcgacgaccagctc 154 ||||||||||||| ||||||||||||| Sbjct: 1135433 gagatcgtgctcagcgacgaccagctc 1135407
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 338 ctcaagaacttcacctacaccgacaacttc 367 |||||||||||||||||| || |||||||| Sbjct: 99225 ctcaagaacttcacctactcccacaacttc 99254
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 338 ctcaagaacttcacctacaccgacaacttc 367 |||||||||||||||||| || |||||||| Sbjct: 32780316 ctcaagaacttcacctactcccacaacttc 32780287
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 338 ctcaagaacttcacctacaccgacaacttc 367 |||||||||||||||||| || |||||||| Sbjct: 32870826 ctcaagaacttcacctactcccacaacttc 32870797
>dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A10, full insert sequence Length = 1408 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 338 ctcaagaacttcacctacaccgacaacttc 367 |||||||||||||||||| || |||||||| Sbjct: 1046 ctcaagaacttcacctactcccacaacttc 1075
>ref|XM_467043.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1323 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 gctcaccggctgcatcccgccgcaggtcg 179 |||||||||| ||||||||||||||||| Sbjct: 552 gctcaccggcgccatcccgccgcaggtcg 580
>ref|NM_193983.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 77 ctcggcgggtgcatcccgccctccatcgg 105 |||||||| |||||||||||| ||||||| Sbjct: 730 ctcggcggctgcatcccgcccaccatcgg 758
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 ccgccgtctgcggcctcgccg 335 ||||||||||||||||||||| Sbjct: 27292 ccgccgtctgcggcctcgccg 27312
>ref|XM_843377.1| PREDICTED: Canis familiaris similar to UDP-N-acetylglucosamine: alpha-1,3-D-mannoside beta-1,4-N-acetylglucosaminyltransferase IV (LOC606896), mRNA Length = 1308 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 ggggcgctccccgcggccatc 250 ||||||||||||||||||||| Sbjct: 878 ggggcgctccccgcggccatc 858
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 cggccatcggcgggatggccg 263 ||||||||||||||||||||| Sbjct: 2815370 cggccatcggcgggatggccg 2815350
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 ccgccgtctgcggcctcgccg 335 ||||||||||||||||||||| Sbjct: 2747485 ccgccgtctgcggcctcgccg 2747505
>dbj|AP003612.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0457B11 Length = 144015 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 cgaggagctcgtcgtcgccgg 288 ||||||||||||||||||||| Sbjct: 66912 cgaggagctcgtcgtcgccgg 66892
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 gatcgtgctcatcgacgacca 150 ||||||||||||||||||||| Sbjct: 2415870 gatcgtgctcatcgacgacca 2415890
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 77 ctcggcgggtgcatcccgccctccatcgg 105 |||||||| |||||||||||| ||||||| Sbjct: 83142 ctcggcggctgcatcccgcccaccatcgg 83114
>dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0486H12 Length = 179085 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 cgaggagctcgtcgtcgccgg 288 ||||||||||||||||||||| Sbjct: 7494 cgaggagctcgtcgtcgccgg 7474
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 151 gctcaccggctgcatcccgccgcaggtcg 179 |||||||||| ||||||||||||||||| Sbjct: 79552 gctcaccggcgccatcccgccgcaggtcg 79524
>dbj|AK109613.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G09, full insert sequence Length = 1345 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 gctcaccggctgcatcccgccgcaggtcg 179 |||||||||| ||||||||||||||||| Sbjct: 552 gctcaccggcgccatcccgccgcaggtcg 580
>dbj|AK108284.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-D04, full insert sequence Length = 717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 cgaggagctcgtcgtcgccgg 288 ||||||||||||||||||||| Sbjct: 46 cgaggagctcgtcgtcgccgg 66
>dbj|AK066482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069O21, full insert sequence Length = 2552 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 ccgccgtctgcggcctcgccg 335 ||||||||||||||||||||| Sbjct: 275 ccgccgtctgcggcctcgccg 255
>dbj|AK064742.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-D10, full insert sequence Length = 1799 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 77 ctcggcgggtgcatcccgccctccatcgg 105 |||||||| |||||||||||| ||||||| Sbjct: 823 ctcggcggctgcatcccgcccaccatcgg 851
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 ccgccgtctgcggcctcgccg 335 ||||||||||||||||||||| Sbjct: 2756516 ccgccgtctgcggcctcgccg 2756536
>ref|XM_476068.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1245 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 302 ggcgccgtgccggccgccgtctgcggcctcgccgggctcaagaacttcacct 353 ||||||||||||| ||||| |||| ||| || | |||||||||||||||| Sbjct: 907 ggcgccgtgccggaggccgtgtgcgacctgccccgcctcaagaacttcacct 958
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 tcacctacaccgacaacttcatca 371 |||| ||||||||||||||||||| Sbjct: 185690 tcacgtacaccgacaacttcatca 185713
>ref|XM_479304.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1283 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cgccgtcgaggagctcgtcg 281 |||||||||||||||||||| Sbjct: 697 cgccgtcgaggagctcgtcg 716
>ref|NM_183633.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtcgaggagctcgtcgtc 283 |||||||||||||||||||| Sbjct: 548 ccgtcgaggagctcgtcgtc 567
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ggatggccgccgtcgaggag 274 |||||||||||||||||||| Sbjct: 2313740 ggatggccgccgtcgaggag 2313759
>gb|AE009180.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 206 of 256 of the complete sequence Length = 12009 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cccgcggccatcggcgggat 258 |||||||||||||||||||| Sbjct: 5783 cccgcggccatcggcgggat 5802
>gb|AE009066.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 92 of 256 of the complete sequence Length = 10606 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 cgcgcacaacaggctcggcgggtg 87 ||||||| |||||||||||||||| Sbjct: 1642 cgcgcacgacaggctcggcgggtg 1619
>gb|AY078063.2| Zea mays B transcriptional activator (b1) gene, b1-B' allele, exons 1 through 3 and partial cds Length = 107840 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cgccgtcgaggagctcgtcg 281 |||||||||||||||||||| Sbjct: 6936 cgccgtcgaggagctcgtcg 6955 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cgccgtcgaggagctcgtcg 281 |||||||||||||||||||| Sbjct: 3024 cgccgtcgaggagctcgtcg 3005
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 agacgctcaacgagatcgtgctca 140 |||||||| ||||||||||||||| Sbjct: 3469711 agacgctcgacgagatcgtgctca 3469734
>ref|XM_965792.1| PREDICTED: Tribolium castaneum similar to CG18408-PH, isoform H (LOC659488), partial mRNA Length = 303 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 acaccgacaacttcatcacctcgc 377 ||||||||||||||||| |||||| Sbjct: 29 acaccgacaacttcatcccctcgc 52
>ref|XM_965678.1| PREDICTED: Tribolium castaneum similar to CG18408-PB, isoform B (LOC659365), mRNA Length = 7227 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 acaccgacaacttcatcacctcgc 377 ||||||||||||||||| |||||| Sbjct: 6416 acaccgacaacttcatcccctcgc 6439
>gb|BC031066.1| Homo sapiens chromosome 1 open reading frame 65, mRNA (cDNA clone MGC:33445 IMAGE:5272765), complete cds Length = 2061 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 tcccgccgcaggtcgggctgctca 188 ||||||||||||||| |||||||| Sbjct: 1048 tcccgccgcaggtcgcgctgctca 1025
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 gggcgccgtgccggccgccgtctg 324 |||||| ||||||||||||||||| Sbjct: 158600 gggcgcggtgccggccgccgtctg 158577
>gb|BC030026.1| Homo sapiens chromosome 1 open reading frame 65, mRNA (cDNA clone MGC:33402 IMAGE:4822648), complete cds Length = 2056 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 tcccgccgcaggtcgggctgctca 188 ||||||||||||||| |||||||| Sbjct: 1050 tcccgccgcaggtcgcgctgctca 1027
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 302 ggcgccgtgccggccgccgtctgcggcctcgccgggctcaagaacttcacct 353 ||||||||||||| ||||| |||| ||| || | |||||||||||||||| Sbjct: 124609 ggcgccgtgccggaggccgtgtgcgacctgccccgcctcaagaacttcacct 124558
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cccgcggccatcggcgggat 258 |||||||||||||||||||| Sbjct: 2283568 cccgcggccatcggcgggat 2283587 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 cgcgcacaacaggctcggcgggtg 87 ||||||| |||||||||||||||| Sbjct: 1009457 cgcgcacgacaggctcggcgggtg 1009434
>ref|NM_152610.1| Homo sapiens chromosome 1 open reading frame 65 (C1orf65), mRNA Length = 2061 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 tcccgccgcaggtcgggctgctca 188 ||||||||||||||| |||||||| Sbjct: 1048 tcccgccgcaggtcgcgctgctca 1025
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cgagatcgtgctcatcgacg 146 |||||||||||||||||||| Sbjct: 5381091 cgagatcgtgctcatcgacg 5381072
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 cggcgggatggccgccgtcgagga 273 ||||||||| |||||||||||||| Sbjct: 2996372 cggcgggatagccgccgtcgagga 2996349
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 302 ggcgccgtgccggccgccgtctgcggcctcgccgggctcaagaacttcacct 353 ||||||||||||| ||||| |||| ||| || | |||||||||||||||| Sbjct: 4756604 ggcgccgtgccggaggccgtgtgcgacctgccccgcctcaagaacttcacct 4756553
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cgcgtggaactgcatctccg 428 |||||||||||||||||||| Sbjct: 1931953 cgcgtggaactgcatctccg 1931934
>dbj|AP002820.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702D12 Length = 137332 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 ccgtcgaggagctcgtcgtc 283 |||||||||||||||||||| Sbjct: 22994 ccgtcgaggagctcgtcgtc 22975
>gb|AF218415.1|AF218415 Bradyrhizobium sp. ORS278 geranylgeranyl synthase (crtE), lycopene cyclase (crtY), phytoene desaturase (crtI), phytoene synthase (crtB), and beta-carotene ketolase (crtW) genes, complete cds Length = 6635 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cttcatcacctcgcgcccga 383 |||||||||||||||||||| Sbjct: 4935 cttcatcacctcgcgcccga 4916
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cgccgtcgaggagctcgtcg 281 |||||||||||||||||||| Sbjct: 21501 cgccgtcgaggagctcgtcg 21482
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtcgaggagctcgtcgtc 283 |||||||||||||||||||| Sbjct: 50899 ccgtcgaggagctcgtcgtc 50918 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtcgaggagctcgtcgtc 283 |||||||||||||||||||| Sbjct: 6065 ccgtcgaggagctcgtcgtc 6084
>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0024L18 Length = 150128 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtcgaggagctcgtcgtc 283 |||||||||||||||||||| Sbjct: 137130 ccgtcgaggagctcgtcgtc 137149 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtcgaggagctcgtcgtc 283 |||||||||||||||||||| Sbjct: 91886 ccgtcgaggagctcgtcgtc 91905
>gb|AF127241.1|AF127241 Nicotiana tabacum arginine decarboxylase 2 (ADC2) gene, complete cds Length = 4368 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 atggcggagacgctcaacga 129 |||||||||||||||||||| Sbjct: 3400 atggcggagacgctcaacga 3419
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cgccgtcgaggagctcgtcg 281 |||||||||||||||||||| Sbjct: 92248 cgccgtcgaggagctcgtcg 92229
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 caagcaggccaccgccgacg 407 |||||||||||||||||||| Sbjct: 12368 caagcaggccaccgccgacg 12349
>gb|AF321137.1| Nicotiana tabacum arginine decarboxylase mRNA, complete cds Length = 2885 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 atggcggagacgctcaacga 129 |||||||||||||||||||| Sbjct: 1723 atggcggagacgctcaacga 1742
>dbj|AK058442.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-G02, full insert sequence Length = 1283 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cgccgtcgaggagctcgtcg 281 |||||||||||||||||||| Sbjct: 697 cgccgtcgaggagctcgtcg 716
>tpe|BN000628.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx99 gene for class III peroxidase 99 precursor, exons 1-2 Length = 2722 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtcgaggagctcgtcgtc 283 |||||||||||||||||||| Sbjct: 2238 ccgtcgaggagctcgtcgtc 2257
>tpe|BN000537.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx8 gene for class III peroxidase 8 precursor, exons 1-2 Length = 1505 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ccgtcgaggagctcgtcgtc 283 |||||||||||||||||||| Sbjct: 1027 ccgtcgaggagctcgtcgtc 1046
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 ggccgccgtcgaggagctcg 278 |||||||||||||||||||| Sbjct: 92765 ggccgccgtcgaggagctcg 92746
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tcacctacaccgacaacttcatca 371 |||| ||||||||||||||||||| Sbjct: 2659491 tcacgtacaccgacaacttcatca 2659468
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 caccggctgcatcccgccgc 173 |||||||||||||||||||| Sbjct: 659732 caccggctgcatcccgccgc 659713
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 302 ggcgccgtgccggccgccgtctgcggcctcgccgggctcaagaacttcacct 353 ||||||||||||| ||||| |||| ||| || | |||||||||||||||| Sbjct: 29012 ggcgccgtgccggaggccgtgtgcgacctgccccgcctcaagaacttcacct 28961
>gb|M58339.1|DVUHYD D.vulgaris [NiFe] hydrogenase large and small subunit genes, complete cds Length = 3100 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 caccgacaacttcatcacct 374 |||||||||||||||||||| Sbjct: 2106 caccgacaacttcatcacct 2125 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,454,369 Number of Sequences: 3902068 Number of extensions: 2454369 Number of successful extensions: 55330 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52715 Number of HSP's gapped (non-prelim): 2612 length of query: 442 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 420 effective length of database: 17,147,199,772 effective search space: 7201823904240 effective search space used: 7201823904240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
