>PRAF1_CANFA (Q8HY39) Prenylated Rab acceptor protein 1 (PRA1 family protein 1)|
          Length = 185

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +2

Query: 215 ESARRSLSDRRPWAEMVDRSAFSRPDSLSDATSRLRRNLTYFRVNY 352
           E   R  +  RPW+  VD+  FSRP +L +   RL RN+ Y++ NY
Sbjct: 33  ERLERRRATIRPWSSFVDQRRFSRPRNLGELCQRLVRNVEYYQSNY 78

>PRAF1_HUMAN (Q9UI14) Prenylated Rab acceptor protein 1 (PRA1 family protein 1)|
          Length = 185

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = +2

Query: 245 RPWAEMVDRSAFSRPDSLSDATSRLRRNLTYFRVNY 352
           RPW+  VD+  FSRP +L +   RL RN+ Y++ NY
Sbjct: 43  RPWSTFVDQQRFSRPRNLGELCQRLVRNVEYYQSNY 78

>PRAF1_RAT (O35394) Prenylated Rab acceptor protein 1 (PRA1 family protein 1)|
          Length = 185

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 245 RPWAEMVDRSAFSRPDSLSDATSRLRRNLTYFRVNY 352
           RPW   VD+  FSRP ++ +   RL RN+ Y++ NY
Sbjct: 43  RPWGTFVDQQRFSRPRNVGELCQRLVRNVEYYQSNY 78

>PRAF1_MOUSE (Q9Z0S9) Prenylated Rab acceptor protein 1 (PRA1 family protein 1)|
           (Prenylin)
          Length = 185

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 245 RPWAEMVDRSAFSRPDSLSDATSRLRRNLTYFRVNY 352
           RPW   VD+  FSRP ++ +   RL RN+ Y++ NY
Sbjct: 43  RPWGTFVDQQRFSRPRNVGELCQRLVRNVEYYQSNY 78

>PRA1_SCHPO (Q9UUN5) PRA1-like protein|
          Length = 171

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 203 SRISESARRSLSDRRPWAEMVDRSAFSRPDSLSDATSRLRRNLTYFRVNY 352
           S I  S  + LS  +   E +D    SRP + S+A SR+  N + F  NY
Sbjct: 16  SEIYASRAQYLSGFKSVGEFLDVRRISRPRNFSEAQSRISFNFSRFSSNY 65

>BRO1_CRYNE (Q5KE13) Vacuolar protein-sorting protein BRO1 (BRO|
           domain-containing protein 1)
          Length = 957

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 13  PSRLLESTPRSAPDSAPHGFRADTAAPPPGHQP 111
           PSR   ++P  AP   P        APPPGH P
Sbjct: 888 PSRPTYASPPFAPQQPPMQSGHSPYAPPPGHAP 920


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.133    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,043,449
Number of Sequences: 219361
Number of extensions: 381774
Number of successful extensions: 1245
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)