>DSD1_SCHPO (O59715) Dihydroceramide delta(4)-desaturase (EC 1.14.-.-)|
          Length = 362

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 25/52 (48%), Positives = 32/52 (61%)
 Frame = +2

Query: 248 FFWSYTDEPHASRRREILAKHPQIKELFGPDPLAFIKIAVVVLLQLWTATLV 403
           F+W+YT+EPH SRR  IL  HP+I  L G +PL    +  VV LQ   A L+
Sbjct: 29  FYWTYTEEPHKSRRAAILKAHPEIASLNGYEPLTKWIVLGVVSLQFTCAYLL 80

>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
           (ZAP113)
          Length = 1951

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 127 RVPVSPAKEQPPLPEPSEE 183
           +VP SP+ E+PPLP P+EE
Sbjct: 341 QVPESPSSEEPPLPPPNEE 359

>PRXC_STRLI (P49323) Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride|
           peroxidase) (CPO-L) (Chloroperoxidase L)
          Length = 275

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 20/53 (37%), Positives = 26/53 (49%)
 Frame = +2

Query: 200 PRADAGDKEEGVMATDFFWSYTDEPHASRRREILAKHPQIKELFGPDPLAFIK 358
           P ADA  K   ++A     SY   PH      +L+ HP   E+  PD LAF+K
Sbjct: 230 PYADAAPKSAELLANATLKSYEGLPHG-----MLSTHP---EVLNPDLLAFVK 274

>IF2_BURS3 (Q39H30) Translation initiation factor IF-2|
          Length = 972

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = -3

Query: 199 RPIASSPPKARAMAAAPSRERRGRAGRLGWLEEPSAMGLAWPRRELFQGVQFRWRCGHGM 20
           +P  ++ P   A A A  R ++  AG+ GW ++ S       R +   GV   WR G   
Sbjct: 312 KPAGAAAPATTAPAGAGDRNKKPGAGKGGWQDDASKRRGIKTRGDSSGGVDRGWR-GGPK 370

Query: 19  GDGR 8
           G GR
Sbjct: 371 GRGR 374

>NCKX2_HUMAN (Q9UI40) Sodium/potassium/calcium exchanger 2 precursor|
           (Na(+)/K(+)/Ca(2+)-exchange protein 2) (Retinal cone
           Na-Ca+K exchanger) (Solute carrier family 24 member 2)
          Length = 661

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 78  QANPIAEGSSNQPSRPARPRLSREGAAA 161
           QA P A    ++P+ PA+PRL R G++A
Sbjct: 308 QAKPSAARDKDEPTLPAKPRLQRGGSSA 335

>ICK_MOUSE (Q9JKV2) Serine/threonine-protein kinase ICK (EC 2.7.11.22)|
           (Intestinal cell kinase) (mICK) (MAK-related kinase)
           (MRK)
          Length = 629

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 23  PMPAPPPELDSLK*LPPRPGQP 88
           P+ APPP   SLK + P PG+P
Sbjct: 572 PLAAPPPGYSSLKAVRPHPGRP 593

>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC|
           3.6.1.-)
          Length = 796

 Score = 26.9 bits (58), Expect(2) = 2.7
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +1

Query: 130 VPVSPAKEQPPLPEPSEERK-QWGA 201
           VP  P ++ PP P P +++K  WGA
Sbjct: 47  VPPPPPEDAPPAPPPEKKKKVGWGA 71



 Score = 21.6 bits (44), Expect(2) = 2.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 23 PMPAPPPELDSLK*LPP 73
          P P PPP  DS    PP
Sbjct: 26 PTPPPPPPEDSAAPPPP 42

>P2Y11_HUMAN (Q96G91) P2Y purinoceptor 11 (P2Y11)|
          Length = 374

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 27  CPHLHLNWTP*NSSRRGQANPIAEGSSNQPSRPARPRLSR 146
           CP    +W P ++   GQA P+   ++ +PS P    LS+
Sbjct: 335 CPGYRDSWNPEDAKSTGQALPLNATAAPKPSEPQSRELSQ 374

>PP2B1_CRYNV (O42773) Serine/threonine-protein phosphatase 2B catalytic subunit|
           A1 (EC 3.1.3.16) (Calcineurin A1)
          Length = 639

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +3

Query: 81  ANPIAEGSSNQPSRPARPRLSREGAAAIARAFGGEEAMGRHARTPATRRKA 233
           ++ IA GS   P  P  P +      A     G   ++G    +P+TRR++
Sbjct: 549 SSAIASGSPGSPGTPTSPSIGGPPLTAWRPGHGRRTSLGTTKTSPSTRRRS 599

>UVRC_PSEPK (Q88FJ7) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 607

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -3

Query: 238 HHAFLLVAGVRAWRPIASSPPKARAMAAAPSRERRGRAGRLGWLEEPSAMG 86
           HH F L     A   I     +A   A    R RRG+A R+  LE+ + +G
Sbjct: 511 HHEFTLKGDSSALHLIQQIRDEAHRFAITGHRARRGKARRVSSLEDVAGVG 561

>TIG_RHIME (Q92Q12) Trigger factor (TF)|
          Length = 491

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 120 RPARPRLSREGAAAIARAFGGEEAMGRHARTPATRRKA 233
           +PA+   S++ AAA A A  GEEA     + PA ++ A
Sbjct: 449 KPAKKTASKKKAAAKAEAGEGEEAAAPKKKAPAKKKAA 486

>ICAM5_RABIT (Q28730) Intercellular adhesion molecule 5 precursor (ICAM-5)|
           (Telencephalin)
          Length = 912

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 72  RGQANPIAEGSSNQPSRPARPRLSREGA 155
           RG+ +P    S     RPARPR+SRE A
Sbjct: 685 RGRPSPRVRCSREGAPRPARPRVSREDA 712

>AB1IP_MOUSE (Q8R5A3) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
           (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich
           protein 48)
          Length = 670

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 23  PMPAPPPELDSLK*LPPRPGQPH 91
           P P PPPE D+   LPP P  P+
Sbjct: 562 PPPPPPPEEDNSGLLPPPPPPPY 584

>NUOM_MYCTU (O53307) NADH-quinone oxidoreductase chain M (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain M) (NDH-1, chain M)
          Length = 553

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = +3

Query: 81  ANPIAEGSSNQPSRPARPRLSREGAAAIARAFGGEEAMGRHARTPAT 221
           A+ ++  S   P RPA PRL         R+ GGE   G HA    T
Sbjct: 110 ADDLSPASGRYPQRPAPPRL---------RSSGGERTRGVHAYVALT 147

>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4) (Fragment)
          Length = 1048

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 14  ISHPMPAPPPELDSLK*LPPRPGQPH 91
           +  P   PPP L     +PPRP  PH
Sbjct: 752 LQRPPGMPPPHLQRFPMMPPRPMPPH 777

>HXA5_CHICK (Q6B3N0) Homeobox protein Hox-A5|
          Length = 270

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/77 (23%), Positives = 29/77 (37%)
 Frame = +3

Query: 3   STRPSPIPCPHLHLNWTP*NSSRRGQANPIAEGSSNQPSRPARPRLSREGAAAIARAFGG 182
           S  P P P P   +  +P + S  G  N +   SS   +  +   +SR+G    +     
Sbjct: 93  SHSPPPDPLPCTAVAASPVSESHHGVKNSLGNSSSTSSNSSSSTHISRDGVGTSSGTEED 152

Query: 183 EEAMGRHARTPATRRKA 233
             A    A  P+ +  A
Sbjct: 153 TPASSEQASAPSDQSTA 169

>NRFA_PENUR (Q92269) Nitrogen regulatory protein nrfA|
          Length = 865

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 17  SHPMPAPPPELDSLK*LPPRPGQP 88
           +HP P+ PPE      +P RPG P
Sbjct: 627 NHPSPSTPPESGLSSAVPSRPGSP 650

>LAS17_YEAST (Q12446) Proline-rich protein LAS17|
          Length = 633

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +3

Query: 12  PSPIPCPHLHLNWTP*NSSRRGQANPIAEGSSNQPSRPARPRLSR 146
           P+P P PH H+     NS+      P A G    P+ P  PR SR
Sbjct: 352 PAPPPPPHRHVTSNTLNSAGGNSLLPQATGRRG-PAPPPPPRASR 395

>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)|
          Length = 3866

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 130  VPVSPAKEQPPLPEPSEERKQ 192
            VP  P K+QPP PEP  E+ +
Sbjct: 1222 VPSEPKKKQPPPPEPGPEQSK 1242

>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4)
          Length = 1147

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 14  ISHPMPAPPPELDSLK*LPPRPGQPH 91
           +  P   PPP L     +PPRP  PH
Sbjct: 859 LQRPPGMPPPHLQRFPLMPPRPMPPH 884

>AREA_PENRO (O13508) Nitrogen regulatory protein areA (Nitrogen regulator nmc)|
          Length = 860

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 17  SHPMPAPPPELDSLK*LPPRPGQP 88
           +HP P+ PPE      +P RPG P
Sbjct: 622 NHPSPSTPPESGLSSAVPSRPGSP 645

>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.2)
            (Low-voltage-activated calcium channel alpha1 3.2
            subunit)
          Length = 2353

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
 Frame = +1

Query: 7    HVHLPSHARTST*TGLPEIXXXXXXXXXXXXXXXXXXXGQRVPVSPAKEQPPLP--EPSE 180
            H+ +PS A      G+P                     G  VP+ P + +PP+P  +P E
Sbjct: 2260 HLTVPSFAFEPLDLGVPSGDPFLDGSHSVTPESRASSSGAIVPLEPPESEPPMPVGDPPE 2319

Query: 181  ERK 189
            +R+
Sbjct: 2320 KRR 2322

>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)|
           (Fragment)
          Length = 290

 Score = 26.2 bits (56), Expect(2) = 7.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 14  ISHPMPAPPPELDSLK*LPPRPGQP 88
           ++ P+P+PPP L      PP P  P
Sbjct: 43  LTPPVPSPPPPLPPPSTSPPPPASP 67



 Score = 20.8 bits (42), Expect(2) = 7.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 133 PVSPAKEQPPLPEPSEERKQ 192
           PVSP     P P P+ E+++
Sbjct: 71  PVSPPPPLSPPPYPAPEKQE 90

>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC|
           3.6.1.-)
          Length = 803

 Score = 25.8 bits (55), Expect(2) = 9.3
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +1

Query: 133 PVSPAKEQPPLPEPSEERKQ---WGA 201
           P  P ++ PP P P E +K+   WGA
Sbjct: 48  PPPPPEDLPPAPPPPEPKKKKVGWGA 73



 Score = 20.8 bits (42), Expect(2) = 9.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 23 PMPAPPPELDSLK*LPP 73
          P P PPP  +S+   PP
Sbjct: 26 PTPPPPPPEESVAPPPP 42


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,996,003
Number of Sequences: 219361
Number of extensions: 1008811
Number of successful extensions: 5770
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5744
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)