>gb|BT018443.1| Zea mays clone EL01N0402H08.d mRNA sequence
          Length = 1253

 Score =  214 bits (108), Expect = 2e-52
 Identities = 117/120 (97%)
 Strand = Plus / Plus

                                                                       
Query: 223 ggaggaaggcgtgatggcgacggacttcttctggtcgtacacggacgagccgcacgcgtc 282
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 ggaggaaggggtgatggcgacggacttcttctggtcgtacacggacgagccgcacgcgtc 161

                                                                       
Query: 283 gcgccgccgggagatcctggccaagcacccccagatcaaggagctcttcggcccggatcc 342
           ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 162 gcgccgccgggagatcctggccaagtacccgcagatcaaggagctcttcggcccggatcc 221

>ref|XM_466968.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1531

 Score =  212 bits (107), Expect = 7e-52
 Identities = 158/175 (90%)
 Strand = Plus / Plus

                                                                       
Query: 222 aggaggaaggcgtgatggcgacggacttcttctggtcgtacacggacgagccgcacgcgt 281
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 331 aggaggaaggggtgatggcgacggacttcttctggtcgtacacggacgagccgcacgcga 390

                                                                       
Query: 282 cgcgccgccgggagatcctggccaagcacccccagatcaaggagctcttcggcccggatc 341
           |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 391 cgcggcgcagggagatcctggccaagcatccccagatcaaggagctcttcggcccggacc 450

                                                                  
Query: 342 ctctcgccttcatcaagatagccgtagttgttttgctccagctatggaccgccac 396
           | ||||||||  ||||||| || | |||||| |  || ||||||||||| |||||
Sbjct: 451 cgctcgcctttctcaagattgctgcagttgtatcacttcagctatggactgccac 505

>dbj|AK101968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076J10, full
           insert sequence
          Length = 1530

 Score =  212 bits (107), Expect = 7e-52
 Identities = 158/175 (90%)
 Strand = Plus / Plus

                                                                       
Query: 222 aggaggaaggcgtgatggcgacggacttcttctggtcgtacacggacgagccgcacgcgt 281
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 330 aggaggaaggggtgatggcgacggacttcttctggtcgtacacggacgagccgcacgcga 389

                                                                       
Query: 282 cgcgccgccgggagatcctggccaagcacccccagatcaaggagctcttcggcccggatc 341
           |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 390 cgcggcgcagggagatcctggccaagcatccccagatcaaggagctcttcggcccggacc 449

                                                                  
Query: 342 ctctcgccttcatcaagatagccgtagttgttttgctccagctatggaccgccac 396
           | ||||||||  ||||||| || | |||||| |  || ||||||||||| |||||
Sbjct: 450 cgctcgcctttctcaagattgctgcagttgtatcacttcagctatggactgccac 504

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  202 bits (102), Expect = 7e-49
 Identities = 123/130 (94%)
 Strand = Plus / Plus

                                                                            
Query: 222      aggaggaaggcgtgatggcgacggacttcttctggtcgtacacggacgagccgcacgcgt 281
                |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 25679117 aggaggaaggggtgatggcgacggacttcttctggtcgtacacggacgagccgcacgcga 25679176

                                                                            
Query: 282      cgcgccgccgggagatcctggccaagcacccccagatcaaggagctcttcggcccggatc 341
                |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 25679177 cgcggcgcagggagatcctggccaagcatccccagatcaaggagctcttcggcccggacc 25679236

                          
Query: 342      ctctcgcctt 351
                | ||||||||
Sbjct: 25679237 cgctcgcctt 25679246

>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0014E22
          Length = 157627

 Score =  202 bits (102), Expect = 7e-49
 Identities = 123/130 (94%)
 Strand = Plus / Plus

                                                                          
Query: 222    aggaggaaggcgtgatggcgacggacttcttctggtcgtacacggacgagccgcacgcgt 281
              |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 149164 aggaggaaggggtgatggcgacggacttcttctggtcgtacacggacgagccgcacgcga 149223

                                                                          
Query: 282    cgcgccgccgggagatcctggccaagcacccccagatcaaggagctcttcggcccggatc 341
              |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 149224 cgcggcgcagggagatcctggccaagcatccccagatcaaggagctcttcggcccggacc 149283

                        
Query: 342    ctctcgcctt 351
              | ||||||||
Sbjct: 149284 cgctcgcctt 149293

>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0010C01
          Length = 186185

 Score =  202 bits (102), Expect = 7e-49
 Identities = 123/130 (94%)
 Strand = Plus / Plus

                                                                         
Query: 222   aggaggaaggcgtgatggcgacggacttcttctggtcgtacacggacgagccgcacgcgt 281
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 81793 aggaggaaggggtgatggcgacggacttcttctggtcgtacacggacgagccgcacgcga 81852

                                                                         
Query: 282   cgcgccgccgggagatcctggccaagcacccccagatcaaggagctcttcggcccggatc 341
             |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 81853 cgcggcgcagggagatcctggccaagcatccccagatcaaggagctcttcggcccggacc 81912

                       
Query: 342   ctctcgcctt 351
             | ||||||||
Sbjct: 81913 cgctcgcctt 81922

>gb|BC001999.1| Mus musculus epithelial membrane protein 3, mRNA (cDNA clone
           MGC:5759 IMAGE:3485948), complete cds
          Length = 649

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 292 ggagatcctggccaagcaccc 312
           |||||||||||||||||||||
Sbjct: 437 ggagatcctggccaagcaccc 457

>gb|AY988438.1| Ochlerotatus atropalpus small subunit ribosomal RNA gene, partial
            sequence
          Length = 1890

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 262  cacggacgagccgcacgcgtc 282
            |||||||||||||||||||||
Sbjct: 1448 cacggacgagccgcacgcgtc 1428

>dbj|AK146939.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched
           library, clone:I920077M08 product:epithelial membrane
           protein 3, full insert sequence
          Length = 785

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 292 ggagatcctggccaagcaccc 312
           |||||||||||||||||||||
Sbjct: 624 ggagatcctggccaagcaccc 644

>gb|AC149053.3| Mus musculus BAC clone RP24-502E20 from chromosome 7, complete sequence
          Length = 221785

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   ggagatcctggccaagcaccc 312
             |||||||||||||||||||||
Sbjct: 43517 ggagatcctggccaagcaccc 43537

>gb|U87948.1|MMU87948 Mus musculus hematopoietic neural membrane protein HNMP-1 mRNA,
           complete cds
          Length = 695

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 292 ggagatcctggccaagcaccc 312
           |||||||||||||||||||||
Sbjct: 570 ggagatcctggccaagcaccc 590

>ref|NM_010129.1| Mus musculus epithelial membrane protein 3 (Emp3), mRNA
          Length = 695

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 292 ggagatcctggccaagcaccc 312
           |||||||||||||||||||||
Sbjct: 570 ggagatcctggccaagcaccc 590

>dbj|AP006351.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT04E21, TM0336,
             complete sequence
          Length = 113233

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 75/93 (80%)
 Strand = Plus / Minus

                                                                         
Query: 244   ggacttcttctggtcgtacacggacgagccgcacgcgtcgcgccgccgggagatcctggc 303
             ||||||||||||||| ||||| || || || ||||| || || |||||  |||||||  |
Sbjct: 75289 ggacttcttctggtcctacaccgatgaacctcacgcctcacgacgccgtcagatcctctc 75230

                                              
Query: 304   caagcacccccagatcaaggagctcttcggccc 336
             |||  |||| || |||||| | |||||||||||
Sbjct: 75229 caaataccctcaaatcaagcaactcttcggccc 75197

>gb|DQ216329.1| Taeniopygia guttata clone 0061P0011C11 ribosomal protein S14
           variant 2-like mRNA, complete sequence
          Length = 801

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 118 gccggccagcgcgtccccgtctctcccg 145
           |||||||||| ||| |||||||||||||
Sbjct: 124 gccggccagcccgtgcccgtctctcccg 97

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 198     cgccacgcgcggacgccggcgaca 221
               |||| |||||||||||||||||||
Sbjct: 1872088 cgccgcgcgcggacgccggcgaca 1872111

>ref|XM_851672.1| PREDICTED: Canis familiaris similar to F11C1.5a, transcript variant
           5 (LOC485463), mRNA
          Length = 4245

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 270 agccgcacgcgtcgcgccgccggg 293
           ||||||||||| ||||||||||||
Sbjct: 71  agccgcacgcgccgcgccgccggg 48

>ref|XM_851626.1| PREDICTED: Canis familiaris similar to F11C1.5a, transcript variant
           4 (LOC485463), mRNA
          Length = 4233

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 270 agccgcacgcgtcgcgccgccggg 293
           ||||||||||| ||||||||||||
Sbjct: 71  agccgcacgcgccgcgccgccggg 48

>ref|XM_542582.2| PREDICTED: Canis familiaris similar to F11C1.5a, transcript variant
           1 (LOC485463), mRNA
          Length = 4347

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 270 agccgcacgcgtcgcgccgccggg 293
           ||||||||||| ||||||||||||
Sbjct: 71  agccgcacgcgccgcgccgccggg 48

>ref|XM_843541.1| PREDICTED: Canis familiaris similar to F11C1.5a, transcript variant
           3 (LOC485463), mRNA
          Length = 5715

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 270 agccgcacgcgtcgcgccgccggg 293
           ||||||||||| ||||||||||||
Sbjct: 71  agccgcacgcgccgcgccgccggg 48

>gb|AC087386.7| Homo sapiens chromosome 15, clone RP11-173D3, complete sequence
          Length = 155343

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    aaccagcccagccggccagc 127
              ||||||||||||||||||||
Sbjct: 107759 aaccagcccagccggccagc 107740

>emb|AL159991.14| Human DNA sequence from clone RP11-14C18 on chromosome 9q21.31-22.2,
            complete sequence
          Length = 31980

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   aactggactccctgaaatag 64
            ||||||||||||||||||||
Sbjct: 8525 aactggactccctgaaatag 8506

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 312     cccagatcaaggagctcttcggcc 335
               |||||||||||||||| |||||||
Sbjct: 6998142 cccagatcaaggagctgttcggcc 6998119

>gb|AC118457.2| Homo sapiens chromosome 5 clone CTD-2515I1, complete sequence
          Length = 86685

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ccatctcccatcccatgccc 31
             ||||||||||||||||||||
Sbjct: 75859 ccatctcccatcccatgccc 75878

>gb|AC113388.2| Homo sapiens chromosome 5 clone RP11-354C13, complete sequence
          Length = 43790

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ccatctcccatcccatgccc 31
             ||||||||||||||||||||
Sbjct: 17836 ccatctcccatcccatgccc 17855

>gb|AC091821.3| Homo sapiens chromosome 5 clone CTC-325G23, complete sequence
          Length = 141771

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ccatctcccatcccatgccc 31
             ||||||||||||||||||||
Sbjct: 14007 ccatctcccatcccatgccc 14026

>gb|AC126335.16| Homo sapiens chromosome 15, clone RP11-854K16, complete sequence
          Length = 178738

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   aaccagcccagccggccagc 127
             ||||||||||||||||||||
Sbjct: 96870 aaccagcccagccggccagc 96851

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     gatcctctcgccttcatcaa 357
               ||||||||||||||||||||
Sbjct: 4802859 gatcctctcgccttcatcaa 4802878

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 338      gatcctctcgccttcatcaa 357
                ||||||||||||||||||||
Sbjct: 10488898 gatcctctcgccttcatcaa 10488879

>gb|AC136632.3| Homo sapiens chromosome 5 clone RP11-889L3, complete sequence
          Length = 222295

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ccatctcccatcccatgccc 31
             ||||||||||||||||||||
Sbjct: 59680 ccatctcccatcccatgccc 59699

>gb|AC092535.4| Homo sapiens BAC clone RP11-20I20 from 4, complete sequence
          Length = 190462

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    gccacgcgcggacgccggcg 218
              ||||||||||||||||||||
Sbjct: 149534 gccacgcgcggacgccggcg 149553

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 114     cccagccggccagcgcgtcc 133
               ||||||||||||||||||||
Sbjct: 3326589 cccagccggccagcgcgtcc 3326608

>dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0053M06
          Length = 175416

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    gatcctctcgccttcatcaa 357
              ||||||||||||||||||||
Sbjct: 111489 gatcctctcgccttcatcaa 111470

>dbj|AP004130.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1014_B05
          Length = 121853

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  gatcctctcgccttcatcaa 357
            ||||||||||||||||||||
Sbjct: 8366 gatcctctcgccttcatcaa 8347

>gb|AC171917.14| Mus musculus chromosome 8, clone RP23-390K13, complete sequence
          Length = 217234

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   tgttttgctccagctatgga 389
             ||||||||||||||||||||
Sbjct: 76164 tgttttgctccagctatgga 76183

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     gatcctctcgccttcatcaa 357
               ||||||||||||||||||||
Sbjct: 4802840 gatcctctcgccttcatcaa 4802859

>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161762

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   gatcctctcgccttcatcaa 357
             ||||||||||||||||||||
Sbjct: 44272 gatcctctcgccttcatcaa 44253


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,959,957
Number of Sequences: 3902068
Number of extensions: 2959957
Number of successful extensions: 56928
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56513
Number of HSP's gapped (non-prelim): 415
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)