ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast56f09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 202 bits (102), Expect = 6e-49 Identities = 135/146 (92%) Strand = Plus / Minus Query: 140 gcgtgcatcgacggcaaggacgtccgcctcttcccctgcctcttctgcaacaagaagttc 199 ||||||||||||||||||||||| || || ||||| ||| | |||||||||||||||||| Sbjct: 32342871 gcgtgcatcgacggcaaggacgtgcggctgttcccgtgcttgttctgcaacaagaagttc 32342812 Query: 200 ttgaagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagcatcggc 259 ||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 32342811 ttgaagtcgcaggcgctgggcgggcaccagaacgcgcacaagaaggagcggagcatcggg 32342752 Query: 260 tggaacccctacttctacatgccgcc 285 ||||| |||||||||||||||||||| Sbjct: 32342751 tggaatccctacttctacatgccgcc 32342726 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Minus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 ||||||||||||||| ||||||||||||||||||||| Sbjct: 6068089 gtcgcaggcgctcgggggccaccagaacgcgcacaag 6068053 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagc 253 ||||||||||| ||||| |||||||||||||||||| |||||||||| Sbjct: 22659438 tcgcaggcgctgggcgggcaccagaacgcgcacaagcgggagcgcagc 22659391 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 193 gaagttcttgaagtcgcaggcgctcggcggccaccagaacgcgcac 238 ||||||||| | ||||||||||| ||||| ||||||||||||||| Sbjct: 7323399 gaagttcttcagctcgcaggcgctgggcgggcaccagaacgcgcac 7323354
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 202 bits (102), Expect = 6e-49 Identities = 135/146 (92%) Strand = Plus / Minus Query: 140 gcgtgcatcgacggcaaggacgtccgcctcttcccctgcctcttctgcaacaagaagttc 199 ||||||||||||||||||||||| || || ||||| ||| | |||||||||||||||||| Sbjct: 76638 gcgtgcatcgacggcaaggacgtgcggctgttcccgtgcttgttctgcaacaagaagttc 76579 Query: 200 ttgaagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagcatcggc 259 ||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 76578 ttgaagtcgcaggcgctgggcgggcaccagaacgcgcacaagaaggagcggagcatcggg 76519 Query: 260 tggaacccctacttctacatgccgcc 285 ||||| |||||||||||||||||||| Sbjct: 76518 tggaatccctacttctacatgccgcc 76493
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 202 bits (102), Expect = 6e-49 Identities = 135/146 (92%) Strand = Plus / Minus Query: 140 gcgtgcatcgacggcaaggacgtccgcctcttcccctgcctcttctgcaacaagaagttc 199 ||||||||||||||||||||||| || || ||||| ||| | |||||||||||||||||| Sbjct: 32433381 gcgtgcatcgacggcaaggacgtgcggctgttcccgtgcttgttctgcaacaagaagttc 32433322 Query: 200 ttgaagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagcatcggc 259 ||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 32433321 ttgaagtcgcaggcgctgggcgggcaccagaacgcgcacaagaaggagcggagcatcggg 32433262 Query: 260 tggaacccctacttctacatgccgcc 285 ||||| |||||||||||||||||||| Sbjct: 32433261 tggaatccctacttctacatgccgcc 32433236 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Minus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 ||||||||||||||| ||||||||||||||||||||| Sbjct: 6067302 gtcgcaggcgctcgggggccaccagaacgcgcacaag 6067266 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagc 253 ||||||||||| ||||| |||||||||||||||||| |||||||||| Sbjct: 22652467 tcgcaggcgctgggcgggcaccagaacgcgcacaagcgggagcgcagc 22652420 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 193 gaagttcttgaagtcgcaggcgctcggcggccaccagaacgcgcac 238 ||||||||| | ||||||||||| ||||| ||||||||||||||| Sbjct: 7321294 gaagttcttcagctcgcaggcgctgggcgggcaccagaacgcgcac 7321249
>dbj|AK067369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D22, full insert sequence Length = 1208 Score = 202 bits (102), Expect = 6e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 140 gcgtgcatcgacggcaaggacgtccgcctcttcccctgcctcttctgcaacaagaagttc 199 ||||||||||||||||||||||| || || ||||| ||| | |||||||||||||||||| Sbjct: 109 gcgtgcatcgacggcaaggacgtgcggctgttcccgtgcttgttctgcaacaagaagttc 168 Query: 200 ttgaagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagcatcggc 259 ||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 169 ttgaagtcgcaggcgctgggcgggcaccagaacgcgcacaagaaggagcggagcatcggg 228 Query: 260 tggaacccctacttctacatgccgcc 285 ||||| |||||||||||||||||||| Sbjct: 229 tggaatccctacttctacatgccgcc 254
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 170 ttcccctgcctcttctgcaacaagaagttcttgaagtcgcaggcgctcggcggccaccag 229 ||||| |||||||||||| | ||||||||| | ||||||||||||||||| || |||||| Sbjct: 119261 ttcccgtgcctcttctgcgagaagaagttcgtcaagtcgcaggcgctcggtgggcaccag 119320 Query: 230 aacgcgcacaagaaggagcgc 250 |||||||||| |||||||||| Sbjct: 119321 aacgcgcacaggaaggagcgc 119341
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 170 ttcccctgcctcttctgcaacaagaagttcttgaagtcgcaggcgctcggcggccaccag 229 ||||| |||||||||||| | ||||||||| | ||||||||||||||||| || |||||| Sbjct: 18666 ttcccgtgcctcttctgcgagaagaagttcgtcaagtcgcaggcgctcggtgggcaccag 18725 Query: 230 aacgcgcacaagaaggagcgc 250 |||||||||| |||||||||| Sbjct: 18726 aacgcgcacaggaaggagcgc 18746
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 170 ttcccctgcctcttctgcaacaagaagttcttgaagtcgcaggcgctcggcggccaccag 229 ||||| |||||||||||| | ||||||||| | ||||||||||||||||| || |||||| Sbjct: 2924650 ttcccgtgcctcttctgcgagaagaagttcgtcaagtcgcaggcgctcggtgggcaccag 2924709 Query: 230 aacgcgcacaagaaggagcgc 250 |||||||||| |||||||||| Sbjct: 2924710 aacgcgcacaggaaggagcgc 2924730 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgcaggcgctcggcggccac 226 |||||||||||||||||||| Sbjct: 7793512 cgcaggcgctcggcggccac 7793531
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 93.7 bits (47), Expect = 4e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 167 ctcttcccctgcctcttctgcaacaagaagttcttgaagtcgcaggcgctcggcggccac 226 |||||||| ||||||||||||||||||||||| | |||||||||||||| || || ||| Sbjct: 26245086 ctcttcccttgcctcttctgcaacaagaagtttctcaagtcgcaggcgctagggggacac 26245027 Query: 227 cagaacgcgcacaagaaggagcgcagcatcggctggaac 265 ||||| || |||||||||||| | ||| |||| |||||| Sbjct: 26245026 cagaatgcacacaagaaggagaggagcgtcgggtggaac 26244988
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 93.7 bits (47), Expect = 4e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 167 ctcttcccctgcctcttctgcaacaagaagttcttgaagtcgcaggcgctcggcggccac 226 |||||||| ||||||||||||||||||||||| | |||||||||||||| || || ||| Sbjct: 26173262 ctcttcccttgcctcttctgcaacaagaagtttctcaagtcgcaggcgctagggggacac 26173203 Query: 227 cagaacgcgcacaagaaggagcgcagcatcggctggaac 265 ||||| || |||||||||||| | ||| |||| |||||| Sbjct: 26173202 cagaatgcacacaagaaggagaggagcgtcgggtggaac 26173164
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 93.7 bits (47), Expect = 4e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 167 ctcttcccctgcctcttctgcaacaagaagttcttgaagtcgcaggcgctcggcggccac 226 |||||||| ||||||||||||||||||||||| | |||||||||||||| || || ||| Sbjct: 9070 ctcttcccttgcctcttctgcaacaagaagtttctcaagtcgcaggcgctagggggacac 9011 Query: 227 cagaacgcgcacaagaaggagcgcagcatcggctggaac 265 ||||| || |||||||||||| | ||| |||| |||||| Sbjct: 9010 cagaatgcacacaagaaggagaggagcgtcgggtggaac 8972
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 93.7 bits (47), Expect = 4e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 167 ctcttcccctgcctcttctgcaacaagaagttcttgaagtcgcaggcgctcggcggccac 226 |||||||| ||||||||||||||||||||||| | |||||||||||||| || || ||| Sbjct: 135324 ctcttcccttgcctcttctgcaacaagaagtttctcaagtcgcaggcgctagggggacac 135265 Query: 227 cagaacgcgcacaagaaggagcgcagcatcggctggaac 265 ||||| || |||||||||||| | ||| |||| |||||| Sbjct: 135264 cagaatgcacacaagaaggagaggagcgtcgggtggaac 135226
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 89.7 bits (45), Expect = 6e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 170 ttcccctgcctcttctgcaacaagaagttcttgaagtcgcaggcgctcggcggccaccag 229 ||||| |||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct: 2871993 ttcccgtgcctcttctgcgccaagacgttccgcaagtcgcaggcgctcggcggccaccag 2871934 Query: 230 aacgcgcacaagaaggagcgc 250 ||||||||| |||||||||| Sbjct: 2871933 aacgcgcaccggaaggagcgc 2871913 Score = 46.1 bits (23), Expect = 0.085 Identities = 47/55 (85%) Strand = Plus / Plus Query: 193 gaagttcttgaagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggag 247 ||||||||| | ||||||||||| || || ||||||||||| ||||||| |||| Sbjct: 24110911 gaagttcttcagctcgcaggcgctgggtgggcaccagaacgcccacaagagggag 24110965 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cggcggctccggcgctgccg 374 |||||||||||||||||||| Sbjct: 5288671 cggcggctccggcgctgccg 5288690
>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0050B07 Length = 142134 Score = 89.7 bits (45), Expect = 6e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 170 ttcccctgcctcttctgcaacaagaagttcttgaagtcgcaggcgctcggcggccaccag 229 ||||| |||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct: 42280 ttcccgtgcctcttctgcgccaagacgttccgcaagtcgcaggcgctcggcggccaccag 42221 Query: 230 aacgcgcacaagaaggagcgc 250 ||||||||| |||||||||| Sbjct: 42220 aacgcgcaccggaaggagcgc 42200
>ref|NM_184257.1| Oryza sativa (japonica cultivar-group), mRNA Length = 804 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 287
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1801895 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 1801852 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 18069934 tcgcaggcgctgggcgggcaccagaacgcgcacaagaaggagcg 18069977 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgaggatggaggagcgg 119 |||||||||||||||||||| Sbjct: 32528775 cgccgaggatggaggagcgg 32528794 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 atggcggcgccggcgcgtgc 145 |||||||||||||||||||| Sbjct: 12281111 atggcggcgccggcgcgtgc 12281092
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43277 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 43234
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagc 253 |||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 15755969 tcgcaggcgctcggcggccaccagaacgcgcacaagtacgagcgcagc 15755922 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagc 253 ||||||||||| |||||||||||||||||||||||| | ||||||||| Sbjct: 15644286 tcgcaggcgctgggcggccaccagaacgcgcacaagtacgagcgcagc 15644333 Score = 71.9 bits (36), Expect = 1e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||||||||||||||||||||||||||| Sbjct: 15607619 tcgcaggcgctcggcggccaccagaacgcgcacaag 15607654 Score = 67.9 bits (34), Expect = 2e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 208 gcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||||||||||||||||||||||||| Sbjct: 15579202 gcaggcgctcggcggccaccagaacgcgcacaag 15579235 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 184 ctgcaacaagaagttcttgaagtcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||| |||||||||||| |||||||||||| ||||||||||||||||| |||||| Sbjct: 15775079 ctgcgacaagaagttctactcgtcgcaggcgctgggcggccaccagaacgcccacaag 15775022 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||| ||||| |||||||||||||||||| Sbjct: 16555981 gtcgcaggcgctgggcgggcaccagaacgcgcacaag 16556017 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 ||||||||||| || ||||||||||||||||||||| Sbjct: 21906929 tcgcaggcgctgggaggccaccagaacgcgcacaag 21906894 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 gccgcgccgcccgccgccgg 333 |||||||||||||||||||| Sbjct: 18773357 gccgcgccgcccgccgccgg 18773376 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 gccgcgccgcccgccgccgg 333 |||||||||||||||||||| Sbjct: 18772969 gccgcgccgcccgccgccgg 18772988 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cggcggcgcagtccgtcgcc 103 |||||||||||||||||||| Sbjct: 9439110 cggcggcgcagtccgtcgcc 9439091
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0039E17 Length = 144126 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagc 253 |||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 41155 tcgcaggcgctcggcggccaccagaacgcgcacaagtacgagcgcagc 41108 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 184 ctgcaacaagaagttcttgaagtcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||| |||||||||||| |||||||||||| ||||||||||||||||| |||||| Sbjct: 60265 ctgcgacaagaagttctactcgtcgcaggcgctgggcggccaccagaacgcccacaag 60208
>dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0016E03 Length = 152934 Score = 79.8 bits (40), Expect = 6e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagc 253 |||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 147276 tcgcaggcgctcggcggccaccagaacgcgcacaagtacgagcgcagc 147229 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagc 253 ||||||||||| |||||||||||||||||||||||| | ||||||||| Sbjct: 35593 tcgcaggcgctgggcggccaccagaacgcgcacaagtacgagcgcagc 35640
>ref|XM_468054.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1048 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 418 gtcgcaggcgctgggcggccaccagaacgcgcacaagagggagcg 462
>ref|XM_507004.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1448_G06.27 mRNA Length = 1234 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 517 gtcgcaggcgctgggcggccaccagaacgcgcacaagagggagcg 561
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 32769352 gtcgcaggcgctgggcggccaccagaacgcgcacaagagggagcg 32769308 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgca 251 ||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 4595060 tcgcaggcgctgggcggccaccagaacgcgcacaagcgggagcgca 4595015 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 cggtgatggcggcgccggcg 140 |||||||||||||||||||| Sbjct: 1185480 cggtgatggcggcgccggcg 1185499
>dbj|AP005538.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0013K01 Length = 139464 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 27370 gtcgcaggcgctgggcggccaccagaacgcgcacaagagggagcg 27326
>dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1448_G06 Length = 136823 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 97587 gtcgcaggcgctgggcggccaccagaacgcgcacaagagggagcg 97543
>dbj|AK068762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013165P15, full insert sequence Length = 1234 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 517 gtcgcaggcgctgggcggccaccagaacgcgcacaagagggagcg 561
>dbj|AK058592.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-G09, full insert sequence Length = 1048 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 418 gtcgcaggcgctgggcggccaccagaacgcgcacaagagggagcg 462
>ref|XM_472635.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 528 Score = 71.9 bits (36), Expect = 1e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||||||||||||||||||||||||||| Sbjct: 139 tcgcaggcgctcggcggccaccagaacgcgcacaag 174
>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03, complete sequence Length = 46422 Score = 71.9 bits (36), Expect = 1e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||||||||||||||||||||||||||| Sbjct: 18096 tcgcaggcgctcggcggccaccagaacgcgcacaag 18131
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 1e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||||||||||||||||||||||||||| Sbjct: 22119615 tcgcaggcgctcggcggccaccagaacgcgcacaag 22119650 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 ccgcctcctccgcgcacctccacgc 309 ||||||||||||||| ||||||||| Sbjct: 102464 ccgcctcctccgcgcgcctccacgc 102488
>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 97175 tcgcaggcgctgggcgggcaccagaacgcgcacaagaaggagcg 97218
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 71.9 bits (36), Expect = 1e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcg 249 ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 46375 tcgcaggcgctgggcgggcaccagaacgcgcacaagaaggagcg 46418
>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0689B09 Length = 144932 Score = 71.9 bits (36), Expect = 1e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||||||||||||||||||||||||||| Sbjct: 128474 tcgcaggcgctcggcggccaccagaacgcgcacaag 128509 Score = 67.9 bits (34), Expect = 2e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 208 gcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||||||||||||||||||||||||| Sbjct: 100057 gcaggcgctcggcggccaccagaacgcgcacaag 100090
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 71.9 bits (36), Expect = 1e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||||||||||||||||||||||||||| Sbjct: 44120 tcgcaggcgctcggcggccaccagaacgcgcacaag 44155
>ref|XM_464343.1| Oryza sativa (japonica cultivar-group), mRNA Length = 585 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgca 251 ||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 274 tcgcaggcgctgggcggccaccagaacgcgcacaagcgggagcgca 319
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgc 250 |||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 5399270 gtcgcaggcgctgggcggccaccagaacgcgcacaagcgggagcgc 5399315 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 cacgccaatgccgcgccgccc 325 ||||||||||||||||||||| Sbjct: 14160910 cacgccaatgccgcgccgccc 14160930
>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529B09 Length = 138188 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgc 250 |||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 30204 gtcgcaggcgctgggcggccaccagaacgcgcacaagcgggagcgc 30249
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgca 251 ||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 130439 tcgcaggcgctgggcggccaccagaacgcgcacaagcgggagcgca 130394
>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090D11, complete sequence Length = 174865 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Minus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 ||||||||||||||| ||||||||||||||||||||| Sbjct: 61565 gtcgcaggcgctcgggggccaccagaacgcgcacaag 61529
>dbj|AK109827.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-B06, full insert sequence Length = 1907 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 ||||||||||||||| ||||||||||||||||||||| Sbjct: 534 gtcgcaggcgctcgggggccaccagaacgcgcacaag 570
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagc 253 ||||||||||| ||||| |||||||||||||||||| |||||||||| Sbjct: 8708 tcgcaggcgctgggcgggcaccagaacgcgcacaagcgggagcgcagc 8755
>ref|XM_483733.1| Oryza sativa (japonica cultivar-group), mRNA Length = 477 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 ||||||||||| |||||||||||||||||||||||| Sbjct: 211 tcgcaggcgctgggcggccaccagaacgcgcacaag 246
>ref|XM_463128.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1167 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagc 253 ||||||||||| ||||| |||||||||||||||||| |||||||||| Sbjct: 524 tcgcaggcgctgggcgggcaccagaacgcgcacaagcgggagcgcagc 571
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 ||||||||||| |||||||||||||||||||||||| Sbjct: 27811510 tcgcaggcgctgggcggccaccagaacgcgcacaag 27811475 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||| ||||| |||||||||||||||||| Sbjct: 22748071 gtcgcaggcgctgggcgggcaccagaacgcgcacaag 22748107 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgc 250 |||||||||||| || || |||||||||||||||||| ||||||| Sbjct: 10775710 gtcgcaggcgctgggggggcaccagaacgcgcacaagcgggagcgc 10775665
>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0439B07 Length = 89475 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 ||||||||||| |||||||||||||||||||||||| Sbjct: 65967 tcgcaggcgctgggcggccaccagaacgcgcacaag 65932
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 ||||||||||| |||||||||||||||||||||||| Sbjct: 19588 tcgcaggcgctgggcggccaccagaacgcgcacaag 19553
>dbj|AK059013.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A06, full insert sequence Length = 1167 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagc 253 ||||||||||| ||||| |||||||||||||||||| |||||||||| Sbjct: 524 tcgcaggcgctgggcgggcaccagaacgcgcacaagcgggagcgcagc 571
>gb|AY105744.1| Zea mays PCO083183 mRNA sequence Length = 532 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagc 253 ||||||||||| ||||| |||||||||||||||||| |||||||||| Sbjct: 318 tcgcaggcgctaggcgggcaccagaacgcgcacaagcgggagcgcagc 365
>ref|XM_482820.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||| ||||| |||||||||||||||||| Sbjct: 510 gtcgcaggcgctgggcgggcaccagaacgcgcacaag 546
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1123_B08 Length = 134028 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||| ||||| |||||||||||||||||| Sbjct: 88206 gtcgcaggcgctgggcgggcaccagaacgcgcacaag 88242
>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1116H04 Length = 140142 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||| ||||| |||||||||||||||||| Sbjct: 74713 gtcgcaggcgctgggcgggcaccagaacgcgcacaag 74749
>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1111C03 Length = 144879 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||| ||||| |||||||||||||||||| Sbjct: 116865 gtcgcaggcgctgggcgggcaccagaacgcgcacaag 116901
>dbj|AK120514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124A16, full insert sequence Length = 1364 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||| ||||| |||||||||||||||||| Sbjct: 378 gtcgcaggcgctgggcgggcaccagaacgcgcacaag 414
>gb|AF466199.1| Sorghum bicolor putative receptor protein kinase, aminoalcoholphosphotransferase, putative growth-regulating factor 1, putative GAG-POL precursor, putative GAG-POL precursor, putative RIRE2 orf3, putative anthocyanin regulatory C1, putative protein T30F21.6, putative copia polyprotein, putative copia polyprotein, putative protein NP_196765.1, and gb protein genes, complete cds; and putative zinc finger protein gene, partial cds Length = 144159 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||| ||||| |||||||||||||||||| Sbjct: 143581 gtcgcaggcgctgggcgggcaccagaacgcgcacaag 143617
>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5), epsilon-COP (Z438D03.6), putative kinase (Z438D03.7), unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes, complete cds Length = 185988 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||| ||||| |||||||||||||||||| Sbjct: 11184 gtcgcaggcgctgggcgggcaccagaacgcgcacaag 11148
>dbj|AK058457.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H09, full insert sequence Length = 1236 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaag 241 |||||||||||| ||||| |||||||||||||||||| Sbjct: 510 gtcgcaggcgctgggcgggcaccagaacgcgcacaag 546
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 ||||||||||| || ||||||||||||||||||||| Sbjct: 112363 tcgcaggcgctgggaggccaccagaacgcgcacaag 112328
>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1065_E04 Length = 115865 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 206 tcgcaggcgctcggcggccaccagaacgcgcacaag 241 ||||||||||| || ||||||||||||||||||||| Sbjct: 37646 tcgcaggcgctgggaggccaccagaacgcgcacaag 37611
>gb|AY022422.1| Oryza sativa microsatellite MRG4747 containing (ACG)X8, closest to marker S10074, genomic sequence Length = 224 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 203 aagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgcagcatcggctgg 262 |||||||||||||| || || |||||||| || |||||||||||| | ||| |||| ||| Sbjct: 2 aagtcgcaggcgctagggggacaccagaatgcacacaagaaggagaggagcgtcgggtgg 61 Query: 263 aac 265 ||| Sbjct: 62 aac 64
>ref|XM_481229.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgc 250 |||||||||||| || || |||||||||||||||||| ||||||| Sbjct: 354 gtcgcaggcgctgggggggcaccagaacgcgcacaagcgggagcgc 399
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 193 gaagttcttgaagtcgcaggcgctcggcggccaccagaacgcgcac 238 ||||||||| | ||||||||||| ||||| ||||||||||||||| Sbjct: 74655 gaagttcttcagctcgcaggcgctgggcgggcaccagaacgcgcac 74610
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 205 gtcgcaggcgctcggcggccaccagaacgcgcacaagaaggagcgc 250 |||||||||||| || || |||||||||||||||||| ||||||| Sbjct: 72842 gtcgcaggcgctgggggggcaccagaacgcgcacaagcgggagcgc 72797
>dbj|AK071768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110G13, full insert sequence Length = 993 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 193 gaagttcttgaagtcgcaggcgctcggcggccaccagaacgcgcac 238 ||||||||| | ||||||||||| ||||| ||||||||||||||| Sbjct: 338 gaagttcttcagctcgcaggcgctgggcgggcaccagaacgcgcac 383
>dbj|AK066038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047G22, full insert sequence Length = 1270 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 193 gaagttcttgaagtcgcaggcgctcggcggccaccagaacgcgcac 238 ||||||||| | ||||||||||| ||||| ||||||||||||||| Sbjct: 568 gaagttcttcagctcgcaggcgctgggcgggcaccagaacgcgcac 613
>ref|NM_124266.1| Arabidopsis thaliana transcription factor AT5G48890 mRNA, complete cds Length = 522 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 221 ggccaccagaacgcgcacaagaaggagcg 249 |||||||||||||| |||||||||||||| Sbjct: 154 ggccaccagaacgcccacaagaaggagcg 182
>dbj|AB012242.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24G6 Length = 78973 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 221 ggccaccagaacgcgcacaagaaggagcg 249 |||||||||||||| |||||||||||||| Sbjct: 75543 ggccaccagaacgcccacaagaaggagcg 75571
>ref|XM_478980.1| Oryza sativa (japonica cultivar-group), mRNA Length = 770 Score = 46.1 bits (23), Expect = 0.085 Identities = 47/55 (85%) Strand = Plus / Plus Query: 193 gaagttcttgaagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggag 247 ||||||||| | ||||||||||| || || ||||||||||| ||||||| |||| Sbjct: 266 gaagttcttcagctcgcaggcgctgggtgggcaccagaacgcccacaagagggag 320
>gb|BT016457.1| Zea mays clone Contig290 mRNA sequence Length = 1414 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Minus Query: 165 gcctcttcccctgcctcttctgc 187 ||||||||||||||||||||||| Sbjct: 608 gcctcttcccctgcctcttctgc 586
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Plus Query: 118 gggcggtgatggcggcgccggcg 140 ||||||||||||||||||||||| Sbjct: 2918546 gggcggtgatggcggcgccggcg 2918568 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 119 ggcggtgatggcggcgccggcg 140 |||||||||||||||||||||| Sbjct: 2799147 ggcggtgatggcggcgccggcg 2799126 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 354 acggcggctccggcgctgccggcggcgtcggc 385 |||||||| |||||| ||||||||||| |||| Sbjct: 1212342 acggcggcgccggcggtgccggcggcgccggc 1212373 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 cggctccggcgctgccggcggcgtcggc 385 ||||||||||| ||||||||||||||| Sbjct: 338107 cggctccggcggcgccggcggcgtcggc 338080 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 cggcggctccggcgctgccggcgg 378 ||||||||||||||| |||||||| Sbjct: 150027 cggcggctccggcgcggccggcgg 150050
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Plus Query: 118 gggcggtgatggcggcgccggcg 140 ||||||||||||||||||||||| Sbjct: 72350 gggcggtgatggcggcgccggcg 72372
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Plus Query: 118 gggcggtgatggcggcgccggcg 140 ||||||||||||||||||||||| Sbjct: 149366 gggcggtgatggcggcgccggcg 149388 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 119 ggcggtgatggcggcgccggcg 140 |||||||||||||||||||||| Sbjct: 30623 ggcggtgatggcggcgccggcg 30602
>gb|AC114975.2| Homo sapiens chromosome 5 clone RP11-484L7, complete sequence Length = 197363 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Plus Query: 365 ggcgctgccggcggcgtcggctc 387 ||||||||||||||||||||||| Sbjct: 71885 ggcgctgccggcggcgtcggctc 71907
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 46.1 bits (23), Expect = 0.085 Identities = 47/55 (85%) Strand = Plus / Plus Query: 193 gaagttcttgaagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggag 247 ||||||||| | ||||||||||| || || ||||||||||| ||||||| |||| Sbjct: 44326 gaagttcttcagctcgcaggcgctgggtgggcaccagaacgcccacaagagggag 44380
>dbj|AK063147.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-H03, full insert sequence Length = 770 Score = 46.1 bits (23), Expect = 0.085 Identities = 47/55 (85%) Strand = Plus / Plus Query: 193 gaagttcttgaagtcgcaggcgctcggcggccaccagaacgcgcacaagaaggag 247 ||||||||| | ||||||||||| || || ||||||||||| ||||||| |||| Sbjct: 266 gaagttcttcagctcgcaggcgctgggtgggcaccagaacgcccacaagagggag 320
>gb|AY104967.1| Zea mays PCO115016 mRNA sequence Length = 1358 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Minus Query: 165 gcctcttcccctgcctcttctgc 187 ||||||||||||||||||||||| Sbjct: 669 gcctcttcccctgcctcttctgc 647
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 46.1 bits (23), Expect = 0.085 Identities = 29/31 (93%) Strand = Plus / Minus Query: 344 tcggggacctacggcggctccggcgctgccg 374 ||||| ||| ||||||||||||||||||||| Sbjct: 904877 tcgggcaccgacggcggctccggcgctgccg 904847
>ref|NM_195121.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0011A24.27), mRNA Length = 2484 Score = 44.1 bits (22), Expect = 0.34 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 304 ccacgccaatgccgcgccgcc-cgccgccg 332 ||||||||||||||||||||| |||||||| Sbjct: 129 ccacgccaatgccgcgccgccacgccgccg 158
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 119 ggcggtgatggcggcgccggcg 140 |||||||||||||||||||||| Sbjct: 259448 ggcggtgatggcggcgccggcg 259427
>gb|AC113336.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0011A24, from chromosome 10, complete sequence Length = 176832 Score = 44.1 bits (22), Expect = 0.34 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 304 ccacgccaatgccgcgccgcc-cgccgccg 332 ||||||||||||||||||||| |||||||| Sbjct: 128740 ccacgccaatgccgcgccgccacgccgccg 128711
>tpg|BK000881.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M273, complete sequence Length = 10007 Score = 44.1 bits (22), Expect = 0.34 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 304 ccacgccaatgccgcgccgcc-cgccgccg 332 ||||||||||||||||||||| |||||||| Sbjct: 4926 ccacgccaatgccgcgccgccacgccgccg 4897
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.34 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 304 ccacgccaatgccgcgccgcc-cgccgccg 332 ||||||||||||||||||||| |||||||| Sbjct: 4823460 ccacgccaatgccgcgccgccacgccgccg 4823431
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 gccgcgccgcccgccgccgggc 335 |||||||||||||||||||||| Sbjct: 1023129 gccgcgccgcccgccgccgggc 1023150 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 aatgccgcgccgcccgccgcc 331 ||||||||||||||||||||| Sbjct: 3164001 aatgccgcgccgcccgccgcc 3164021 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 gccgcgccgcccgccgccggg 334 ||||||||||||||||||||| Sbjct: 1790105 gccgcgccgcccgccgccggg 1790125 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccgcgccgcccgccgccggg 334 |||||||||||||||||||| Sbjct: 2771336 ccgcgccgcccgccgccggg 2771317
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 364 cggcgctgccggcggcgtcggctcca 389 |||||| ||||||||||||||||||| Sbjct: 1768601 cggcgccgccggcggcgtcggctcca 1768576
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.34 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 304 ccacgccaatgccgcgccgcc-cgccgccg 332 ||||||||||||||||||||| |||||||| Sbjct: 4824281 ccacgccaatgccgcgccgccacgccgccg 4824252
>gb|AC102775.6| Mus musculus chromosome 8, clone RP23-115C10, complete sequence Length = 185846 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 cccctgcctcttctgcaacaa 192 ||||||||||||||||||||| Sbjct: 45070 cccctgcctcttctgcaacaa 45050
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 gcgcgtgcatcgacggcaagg 158 ||||||||||||||||||||| Sbjct: 3442929 gcgcgtgcatcgacggcaagg 3442949
>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete sequence Length = 139971 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 ccgcctcctccgcgcacctccacgc 309 ||||||||||||||| ||||||||| Sbjct: 102464 ccgcctcctccgcgcgcctccacgc 102488
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 tctcgctcacgctggcgccgg 86 ||||||||||||||||||||| Sbjct: 180048 tctcgctcacgctggcgccgg 180028
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 tctcgctcacgctggcgccgg 86 ||||||||||||||||||||| Sbjct: 99195 tctcgctcacgctggcgccgg 99175
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 tctcgctcacgctggcgccgg 86 ||||||||||||||||||||| Sbjct: 309065 tctcgctcacgctggcgccgg 309085
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 363 ccggcgctgccggcggcgtcggctc 387 ||||||| ||||||||||||||||| Sbjct: 4834798 ccggcgccgccggcggcgtcggctc 4834774 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 cgctggcgccggcggcgcag 94 |||||||||||||||||||| Sbjct: 4846905 cgctggcgccggcggcgcag 4846886
>gb|U65510.1|RRU65510 Rhodospirillum rubrum alkyl hydroperoxide reductase (ahpC) gene, partial cds; CooM (cooM), CooK (cooK), CooL (cooL), CooX (cooX), CooU (cooU), CooH (cooH), iron sulfur protein (cooF), carbon monoxide dehydrogenase (cooS), CooC (cooC), CooT (cooT), CooJ (cooJ), putative transcriptional activator; similar to cAMP-receptor (CAP, CRP) protein: PIR Accession Number A26049; similar to fnr (nirR) gene product encoded by GenBank Accession Number J01608; aspartic acid-rich C-terminus similar to acidic region of HMG (high mobility group) protei (cooA), and nicotinate-nucleotide pyrophosphorylase (nadC) genes, complete cds; L-aspartate oxidase (nadB) gene, partial cds; and unknown gene Length = 16259 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 ggcgccggcggcgcagtccgtcgcc 103 |||||||||||||||| |||||||| Sbjct: 11867 ggcgccggcggcgcagcccgtcgcc 11843
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 ggcgccggcggcgcagtccgtcgcc 103 |||||||||||||||| |||||||| Sbjct: 1687683 ggcgccggcggcgcagcccgtcgcc 1687659 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 ggcggtgatggcggcgccggcgcg 142 |||||||||| ||||||||||||| Sbjct: 4152895 ggcggtgatgccggcgccggcgcg 4152918
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 cggcgctgccggcggcgtcgg 384 ||||||||||||||||||||| Sbjct: 3669132 cggcgctgccggcggcgtcgg 3669112 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 363 ccggcgctgccggcggcgtcggctc 387 ||||||| ||||||||||||||||| Sbjct: 1276259 ccggcgccgccggcggcgtcggctc 1276283
>gb|AC087166.3|AC087166 Mus musculus strain C57BL/6J chromosome 12 clone RP23-354D10, complete sequence Length = 210476 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 cccctgcctcttctgcaacaa 192 ||||||||||||||||||||| Sbjct: 82741 cccctgcctcttctgcaacaa 82721
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 ggactcgccccccatgccgccgtcg 49 |||||||| |||||||||||||||| Sbjct: 1298565 ggactcgcgccccatgccgccgtcg 1298589
>dbj|AB110611.1| Pseudomonas sp. MT-1 nar gene cluster (orf1, orf2, orf3, narL, narX, narK, orf4, narM, narG, narH, narJ, narI, nifM), partial and complete cds Length = 15819 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gatggaggagcgggcggtgat 127 ||||||||||||||||||||| Sbjct: 3279 gatggaggagcgggcggtgat 3259
>dbj|AP004992.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0022O02 Length = 176625 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 cacgccaatgccgcgccgccc 325 ||||||||||||||||||||| Sbjct: 4374 cacgccaatgccgcgccgccc 4394
>dbj|AP005806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0014G01 Length = 137040 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 cacgccaatgccgcgccgccc 325 ||||||||||||||||||||| Sbjct: 118219 cacgccaatgccgcgccgccc 118239
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 cccctgcctcttctgcaacaa 192 ||||||||||||||||||||| Sbjct: 771989 cccctgcctcttctgcaacaa 771969
>emb|AL442103.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0102C09, complete sequence Length = 72636 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 ccgcctcctccgcgcacctccacgc 309 ||||||||||||||| ||||||||| Sbjct: 49309 ccgcctcctccgcgcgcctccacgc 49333
>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06, complete sequence Length = 145517 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 ccgcctcctccgcgcacctccacgc 309 ||||||||||||||| ||||||||| Sbjct: 33713 ccgcctcctccgcgcgcctccacgc 33737
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ggctccggcgctgccggcgg 378 |||||||||||||||||||| Sbjct: 701625 ggctccggcgctgccggcgg 701644
>ref|XM_463926.1| Oryza sativa (japonica cultivar-group), mRNA Length = 840 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 cggtgatggcggcgccggcg 140 |||||||||||||||||||| Sbjct: 670 cggtgatggcggcgccggcg 651
>ref|NM_191419.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 684 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cgccgaggatggaggagcgg 119 |||||||||||||||||||| Sbjct: 328 cgccgaggatggaggagcgg 309
>ref|XM_477001.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1530 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cggcggctccggcgctgccg 374 |||||||||||||||||||| Sbjct: 84 cggcggctccggcgctgccg 103
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 355 cggcggctccggcgctgccggcggcgtcggct 386 |||||| ||||||| || |||||||||||||| Sbjct: 63295 cggcggatccggcggtggcggcggcgtcggct 63264
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgcaggcgctcggcggccac 226 |||||||||||||||||||| Sbjct: 44134 cgcaggcgctcggcggccac 44115
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 gccgcgccgcccgccgccgg 333 |||||||||||||||||||| Sbjct: 1878768 gccgcgccgcccgccgccgg 1878787
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgcaggcgctcggcggccac 226 |||||||||||||||||||| Sbjct: 71098 cgcaggcgctcggcggccac 71117
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 cctccgcgcacctccacgccaatg 314 |||||||||||||| ||||||||| Sbjct: 288236 cctccgcgcacctcaacgccaatg 288213
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 cggcgctgccggcggcgtcg 383 |||||||||||||||||||| Sbjct: 94882 cggcgctgccggcggcgtcg 94901
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gccgcgccgcccgccgccgg 333 |||||||||||||||||||| Sbjct: 1586775 gccgcgccgcccgccgccgg 1586756
>gb|AY349219.1| Hordeum vulgare subsp. spontaneum NPGS PI 560559 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349218.1| Hordeum vulgare subsp. spontaneum NPGS PI 559556 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349217.1| Hordeum vulgare subsp. spontaneum NPGS PI 531957 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349216.1| Hordeum vulgare subsp. spontaneum NPGS PI 531853 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349215.1| Hordeum vulgare subsp. spontaneum NPGS PI 531851 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349214.1| Hordeum vulgare subsp. spontaneum NPGS PI 466460 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349213.1| Hordeum vulgare subsp. spontaneum NPGS PI 420916 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349212.1| Hordeum vulgare subsp. spontaneum NPGS PI 420913 alpha-amylase type B gene, partial cds Length = 854 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 406 ccggcgtcgcagtccgtcgccgag 429
>gb|AY349211.1| Hordeum vulgare subsp. spontaneum NPGS PI 420911 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349210.1| Hordeum vulgare subsp. spontaneum NPGS PI 406276 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349209.1| Hordeum vulgare subsp. spontaneum NPGS PI 401371 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349208.1| Hordeum vulgare subsp. spontaneum NPGS PI 401370 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349207.1| Hordeum vulgare subsp. spontaneum NPGS PI 366446 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349206.1| Hordeum vulgare subsp. spontaneum NPGS PI 296926 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349205.1| Hordeum vulgare subsp. spontaneum NPGS PI 293411 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349204.1| Hordeum vulgare subsp. spontaneum NPGS PI 293409 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349203.1| Hordeum vulgare subsp. spontaneum NPGS PI 293402 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349202.1| Hordeum vulgare subsp. spontaneum NPGS PI 268242 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349201.1| Hordeum vulgare subsp. spontaneum NPGS PI 254894 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349200.1| Hordeum vulgare subsp. spontaneum NPGS PI 253933 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349199.1| Hordeum vulgare subsp. spontaneum NPGS PI 236388 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349198.1| Hordeum vulgare subsp. spontaneum NPGS PI 220523 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349197.1| Hordeum vulgare subsp. spontaneum NPGS PI 219796 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349196.1| Hordeum vulgare subsp. spontaneum NPGS PI 212306 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|AY349195.1| Hordeum vulgare subsp. spontaneum NPGS PI 212305 alpha-amylase type B gene, partial cds Length = 856 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 408 ccggcgtcgcagtccgtcgccgag 431
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 cacgctggcgccggcggcgcagtc 96 |||| ||||||||||||||||||| Sbjct: 2063974 cacgttggcgccggcggcgcagtc 2063997
>gb|AF222789.1| Mycobacterium avium subsp. paratuberculosis putative gidB gene, partial cds; rnpA, putative rpmH, putative dnaA, putative dnaN, putative recF, and putative gyrB genes, complete cds; and unknown genes Length = 11418 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 cgccgcccgccgccgggcac 337 |||||||||||||||||||| Sbjct: 8261 cgccgcccgccgccgggcac 8280
>emb|AL136233.14| Human DNA sequence from clone RP11-9E13 on chromosome 10 Contains the 5' end of the RUFY2 gene for RUN and FYVE domain containing 2 (FLJ36895, FLJ10063), the DNA2L gene for DNA2 DNA replication helicase 2-like (yeast) (KIAA0083), a ribosomal protein L26 (RPL26) pseudogene, a novel gene and two CpG islands, complete sequence Length = 138733 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 caggcgctcggcggccacca 228 |||||||||||||||||||| Sbjct: 63220 caggcgctcggcggccacca 63239
>emb|X15227.1|HVAMY56 Barley Amy gene for alpha amylase (clone gRAmy56) (EC 3.2.1.1) Length = 2203 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 798 ccggcgtcgcagtccgtcgccgag 821
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 cggcggctccggcgctgccggcgg 378 ||||||||||||||| |||||||| Sbjct: 150036 cggcggctccggcgcggccggcgg 150059
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gccgcgccgcccgccgccgg 333 |||||||||||||||||||| Sbjct: 1473943 gccgcgccgcccgccgccgg 1473924
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 cggctccggcgctgccggcggcgtcggc 385 ||||||||||| ||||||||||||||| Sbjct: 339056 cggctccggcggcgccggcggcgtcggc 339029
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gggcggtgatggcggcgccg 137 |||||||||||||||||||| Sbjct: 35381 gggcggtgatggcggcgccg 35362
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tgccgcgccgcccgccgccg 332 |||||||||||||||||||| Sbjct: 142912 tgccgcgccgcccgccgccg 142893
>emb|CR860792.1| Pongo pygmaeus mRNA; cDNA DKFZp459L066 (from clone DKFZp459L066) Length = 4185 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 caggcgctcggcggccacca 228 |||||||||||||||||||| Sbjct: 53 caggcgctcggcggccacca 34
>gb|DQ116386.1| Oryza sativa (japonica cultivar-group) hexokinase 4 (HXK4) mRNA, complete cds Length = 1937 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cggcggctccggcgctgccg 374 |||||||||||||||||||| Sbjct: 200 cggcggctccggcgctgccg 219
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cggcgcgtgcatcgacggca 155 |||||||||||||||||||| Sbjct: 320966 cggcgcgtgcatcgacggca 320947
>gb|AE005776.1| Caulobacter crescentus CB15 section 102 of 359 of the complete genome Length = 14015 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 gaggagcgggcggtgatggcggcg 134 ||||||||||||||||| |||||| Sbjct: 11255 gaggagcgggcggtgatcgcggcg 11278
>dbj|AK000925.1| Homo sapiens cDNA FLJ10063 fis, clone HEMBA1001446 Length = 1599 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 caggcgctcggcggccacca 228 |||||||||||||||||||| Sbjct: 28 caggcgctcggcggccacca 9
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ggcggtgatggcggcgccgg 138 |||||||||||||||||||| Sbjct: 3391487 ggcggtgatggcggcgccgg 3391506
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 agcgggcggtgatggcggcg 134 |||||||||||||||||||| Sbjct: 46624 agcgggcggtgatggcggcg 46643
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccgcgccgcccgccgccggg 334 |||||||||||||||||||| Sbjct: 2528570 ccgcgccgcccgccgccggg 2528551
>gb|S68374.1|S68374S1 glucocorticoid receptor {promoter} [human, Genomic, 1602 nt, segment 1 of 2] Length = 1602 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cgcgccgcccgccgccgggc 335 |||||||||||||||||||| Sbjct: 182 cgcgccgcccgccgccgggc 163
>gb|AF287729.1|AF287729 Expression vector pFL746, complete sequence Length = 3524 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 1279 ccggcgtcgcagtccgtcgccgag 1302
>gb|AF372832.1|AF372832 Oryza sativa hexokinase II mRNA, complete cds Length = 1904 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cggcggctccggcgctgccg 374 |||||||||||||||||||| Sbjct: 134 cggcggctccggcgctgccg 153
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgcaggcgctcggcggccac 226 |||||||||||||||||||| Sbjct: 28317396 cgcaggcgctcggcggccac 28317377 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 355 cggcggctccggcgctgccggcggcgtcggct 386 |||||| ||||||| || |||||||||||||| Sbjct: 4091633 cggcggatccggcggtggcggcggcgtcggct 4091602
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tgccgcgccgcccgccgccg 332 |||||||||||||||||||| Sbjct: 8086294 tgccgcgccgcccgccgccg 8086313 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 ggcggcgcagtccgtcgccg 104 |||||||||||||||||||| Sbjct: 5373979 ggcggcgcagtccgtcgccg 5373998
>ref|XM_214321.3| PREDICTED: Rattus norvegicus BPY2 interacting protein 1 (predicted) (Bpy2ip1_predicted), mRNA Length = 3188 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ggcggtgatggcggcgccgg 138 |||||||||||||||||||| Sbjct: 38 ggcggtgatggcggcgccgg 57
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgaggatggaggagcgg 119 |||||||||||||||||||| Sbjct: 116296 cgccgaggatggaggagcgg 116315
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 cggtgatggcggcgccggcg 140 |||||||||||||||||||| Sbjct: 16571 cggtgatggcggcgccggcg 16590
>dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0426D06 Length = 162173 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 atggcggcgccggcgcgtgc 145 |||||||||||||||||||| Sbjct: 105737 atggcggcgccggcgcgtgc 105718
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0417F02 Length = 150660 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cggcggctccggcgctgccg 374 |||||||||||||||||||| Sbjct: 23035 cggcggctccggcgctgccg 23054
>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0589E08 Length = 138416 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cggcggctccggcgctgccg 374 |||||||||||||||||||| Sbjct: 87434 cggcggctccggcgctgccg 87453
>dbj|AP005879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0024J13 Length = 127614 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cggcggcgcagtccgtcgcc 103 |||||||||||||||||||| Sbjct: 122524 cggcggcgcagtccgtcgcc 122505
>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0692F07 Length = 141544 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cggcggcgcagtccgtcgcc 103 |||||||||||||||||||| Sbjct: 2746 cggcggcgcagtccgtcgcc 2727
>emb|X15226.1|HVAMY152 Barley Amy gene for alpha amylase (clone gRAmy152) (EC 3.2.1.1) Length = 2625 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 966 ccggcgtcgcagtccgtcgccgag 989
>ref|XM_320600.2| Anopheles gambiae str. PEST ENSANGP00000015375 (ENSANGG00000012886), partial mRNA Length = 2034 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ggcggtgatggcggcgccgg 138 |||||||||||||||||||| Sbjct: 1215 ggcggtgatggcggcgccgg 1234
>dbj|AK069298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015J20, full insert sequence Length = 1058 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cgccgaggatggaggagcgg 119 |||||||||||||||||||| Sbjct: 397 cgccgaggatggaggagcgg 378
>dbj|AK068149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131M23, full insert sequence Length = 1226 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 211 ggcgctcggcggccaccagaacgcgcac 238 |||||| ||||| ||||||||||||||| Sbjct: 518 ggcgctgggcgggcaccagaacgcgcac 545
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cgccgcccgccgccgggcac 337 |||||||||||||||||||| Sbjct: 1401937 cgccgcccgccgccgggcac 1401918
>tpe|BN000649.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx120 gene for class III peroxidase 120 precursor, exons 1-2 Length = 1077 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 cggcggcgcagtccgtcgcc 103 |||||||||||||||||||| Sbjct: 584 cggcggcgcagtccgtcgcc 603
>emb|CR626858.1| Rice Cluster I (RC-I), uncultured archeon clone 1B6 complete sequence Length = 43820 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cacgctggcgccggcggcgc 92 |||||||||||||||||||| Sbjct: 13966 cacgctggcgccggcggcgc 13985
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 cggcgcgtgcatcgacggca 155 |||||||||||||||||||| Sbjct: 333075 cggcgcgtgcatcgacggca 333056
>emb|AM181558.1| Microbacterium resistens partial ppk gene for polyphosphatkinase, type strain DSM 11986 Length = 1356 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgcctcctccgcgcacctc 304 |||||||||||||||||||| Sbjct: 103 ccgcctcctccgcgcacctc 84
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gcgctgccggcggcgtcggc 385 |||||||||||||||||||| Sbjct: 3271936 gcgctgccggcggcgtcggc 3271917
>dbj|AP003166.2| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-3161I21, complete sequence Length = 36000 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cctcttcccctgcctcttct 185 |||||||||||||||||||| Sbjct: 32205 cctcttcccctgcctcttct 32186
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gccgcgccgcccgccgccgg 333 |||||||||||||||||||| Sbjct: 498920 gccgcgccgcccgccgccgg 498901
>gb|AC160024.2| Pan troglodytes BAC clone CH251-374N3 from chromosome unknown, complete sequence Length = 163279 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cctcttcccctgcctcttct 185 |||||||||||||||||||| Sbjct: 86369 cctcttcccctgcctcttct 86388
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 cgccgcccgccgccgggcac 337 |||||||||||||||||||| Sbjct: 4295 cgccgcccgccgccgggcac 4314
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgcaggcgctcggcggccac 226 |||||||||||||||||||| Sbjct: 28299845 cgcaggcgctcggcggccac 28299826 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 355 cggcggctccggcgctgccggcggcgtcggct 386 |||||| ||||||| || |||||||||||||| Sbjct: 4100327 cggcggatccggcggtggcggcggcgtcggct 4100296
>gb|K02637.1|BLYAMYABD Hordeum vulgare alpha-amylase type B isozyme (Amy6-4) gene, complete cds Length = 2910 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 1449 ccggcgtcgcagtccgtcgccgag 1472
>gb|J04202.1|BLYAMY46 Barley alpha-amylase type B (Amy46) gene, complete cds Length = 2159 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 761 ccggcgtcgcagtccgtcgccgag 784
>gb|M69074.1|HUMGR1 Human glucocorticoid receptor gene, exon 1 Length = 1602 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cgcgccgcccgccgccgggc 335 |||||||||||||||||||| Sbjct: 182 cgcgccgcccgccgccgggc 163
>gb|M73050.1|HUMGRA1 Human glucocorticoid receptor gene, exon 1 Length = 1632 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cgcgccgcccgccgccgggc 335 |||||||||||||||||||| Sbjct: 182 cgcgccgcccgccgccgggc 163
>gb|K02638.1|BLYAMYABE Barley alpha-amylase type B isozyme mRNA, complete cds, clone pHV19 Length = 1119 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 208 ccggcgtcgcagtccgtcgccgag 231
>gb|M17125.1|BLYAMY1A Barley (H.vulgare) alpha-amylase 1 gene, complete cds Length = 1992 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 588 ccggcgtcgcagtccgtcgccgag 611
>gb|M17126.1|BLYAMY1 Barley (H.vulgare) alpha-amylase 1 mRNA, complete cds Length = 1461 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ccggcggcgcagtccgtcgccgag 106 |||||| ||||||||||||||||| Sbjct: 242 ccggcgtcgcagtccgtcgccgag 265 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,213,395 Number of Sequences: 3902068 Number of extensions: 3213395 Number of successful extensions: 96938 Number of sequences better than 10.0: 189 Number of HSP's better than 10.0 without gapping: 208 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86057 Number of HSP's gapped (non-prelim): 10881 length of query: 394 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 372 effective length of database: 17,147,199,772 effective search space: 6378758315184 effective search space used: 6378758315184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
