ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast56f03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 81 1e-15
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 72 9e-13
3EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 35 0.12
4FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 34 0.16
5CAD15_HUMAN (P55291) Muscle-cadherin precursor (M-cadherin) (Cad... 30 2.3
6ESTA_PSEPU (Q6B6R8) Esterase estA precursor (EC 3.1.1.1) 29 6.6
7ESTA_PSEAE (O33407) Esterase estA precursor (EC 3.1.1.1) 29 6.6

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 43/123 (34%), Positives = 62/123 (50%)
 Frame = +2

Query: 14  LLHGANFASGAAGYLDATAALYGAISLGRQLDYFKEYQSXXXXXXXXXXXXXLTSGSIYL 193
           LL G +FASG AGYL  T+  +   ++  QL YF++Y+              + S    +
Sbjct: 205 LLTGVSFASGGAGYLPQTSESWKVTTMLDQLTYFQDYKKRMKKLVGKKKTKKIVSKGAAI 264

Query: 194 VSAGTSDYVQNYYVNAMLAAAYTPDQFADALMQPFTAFVERLYGLGARRIGVTSLPPMGC 373
           V AG++D +  Y+ N         D F   +     +FV +LYG GARRIGV   PP+GC
Sbjct: 265 VVAGSNDLIYTYFGNGAQHLKNDVDSFTTMMADSAASFVLQLYGYGARRIGVIGTPPIGC 324

Query: 374 LPA 382
            P+
Sbjct: 325 TPS 327



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 71.6 bits (174), Expect = 9e-13
 Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
 Frame = +2

Query: 14  LLHGANFASGAAGYLDATAALYGAISLGRQLDYFKEY----------QSXXXXXXXXXXX 163
           LL G +FASG AGY   T+    AI +  QL YF++Y          +            
Sbjct: 278 LLTGVSFASGGAGYNPTTSEAANAIPMLDQLTYFQDYIEKVNRLVRQEKSQYKLAGLEKT 337

Query: 164 XXLTSGSIYLVSAGTSDYVQNYYVNAMLAAAYTPDQFADALMQPFTAFVERLYGLGARRI 343
             L S  + +V  G++D +  Y+ +         D +   +     +FV +LYG GARRI
Sbjct: 338 NQLISKGVAIVVGGSNDLIITYFGSGAQRLKNDIDSYTTIIADSAASFVLQLYGYGARRI 397

Query: 344 GVTSLPPMGCLPA 382
           GV   PP+GC+P+
Sbjct: 398 GVIGTPPLGCVPS 410



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +2

Query: 182 SIYLVSAGTSDYVQNYY-VNAMLAAAYTPDQFADALMQPFTAFVERLYGLGARRIGVTSL 358
           ++Y    G +D  + +  +      A  PD     L+  F+A V+++Y LGAR   + + 
Sbjct: 169 ALYTFDIGQNDLTEGFLNLTVEEVNATVPD-----LVNSFSANVKKIYDLGARTFWIHNT 223

Query: 359 PPMGCLPASVTLF 397
            P+GCL   +T F
Sbjct: 224 GPIGCLSFILTYF 236



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 32/154 (20%), Positives = 52/154 (33%), Gaps = 12/154 (7%)
 Frame = +2

Query: 20  HGANFASGAAGYLDATAAL----YGAISLGRQLDYFKEYQSXXXXXXXXXXXXXLT---- 175
           HGANFA+  +      + L    +   SL  Q   F  + +                   
Sbjct: 99  HGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNFHNRSQTVRSRGGVYKTMLPES 158

Query: 176 ---SGSIYLVSAGTSDYVQNYYVNAMLAAAYTPDQFADALMQPFTAFVERLYGLGARRIG 346
              S ++Y    G +D    Y+ N  +    T       ++  F   ++ +YG G R   
Sbjct: 159 DSFSKALYTFDIGQNDLTAGYFANKTVEQVETE---VPEIISQFMNAIKNIYGQGGRYFW 215

Query: 347 VTSLPPMGCLPASVTLF-XXXXXXXXXXCVERLN 445
           + +  P+GCL   +  F           CV  LN
Sbjct: 216 IHNTGPIGCLAYVIERFPNKASDFDSHGCVSPLN 249



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>CAD15_HUMAN (P55291) Muscle-cadherin precursor (M-cadherin) (Cadherin-15)|
           (Cadherin-14)
          Length = 814

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -3

Query: 382 RREAPHGRQRRHPDPPCAQPVQPLD 308
           RR+AP GR   HP PP   P  PLD
Sbjct: 688 RRDAPQGRL--HPQPPRVLPTSPLD 710



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>ESTA_PSEPU (Q6B6R8) Esterase estA precursor (EC 3.1.1.1)|
          Length = 646

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = +2

Query: 182 SIYLVSAGTSDYVQNYYVNAMLAAAYTPDQFADALMQPFTAFVERLYGLGARRIGVTSLP 361
           ++Y ++ G +D++Q   +N + A      Q A  L+      V+ L   GAR I V  LP
Sbjct: 162 ALYYITGGGNDFLQGRILNDVQA-----QQAAGRLVDS----VQALQQAGARYIVVWLLP 212

Query: 362 PMGCLPAS 385
            +G  PA+
Sbjct: 213 DLGLTPAT 220



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>ESTA_PSEAE (O33407) Esterase estA precursor (EC 3.1.1.1)|
          Length = 646

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = +2

Query: 182 SIYLVSAGTSDYVQNYYVNAMLAAAYTPDQFADALMQPFTAFVERLYGLGARRIGVTSLP 361
           ++Y ++ G +D++Q   +N + A      Q A  L+      V+ L   GAR I V  LP
Sbjct: 162 ALYYITGGGNDFLQGRILNDVQA-----QQAAGRLVDS----VQALQQAGARYIVVWLLP 212

Query: 362 PMGCLPAS 385
            +G  PA+
Sbjct: 213 DLGLTPAT 220


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,282,746
Number of Sequences: 219361
Number of extensions: 523991
Number of successful extensions: 1678
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1676
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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