ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast56f03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1438 Score = 383 bits (193), Expect = e-103 Identities = 328/373 (87%) Strand = Plus / Plus Query: 12 ccctcctccacggcgccaacttcgcctccggcgccgccggctacctcgacgccaccgccg 71 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 389 ccctcctccacggcgccaacttcgcctccggcgcctccggctacctcgacaccaccgcct 448 Query: 72 cgctctacggagcgatctcgctggggcggcagctggactacttcaaggagtaccagtcga 131 | |||||||| ||||| |||||| | |||||||||| ||||||||||||||| || ||| Sbjct: 449 ccctctacggggcgatatcgctgagccggcagctggggtacttcaaggagtacaagacga 508 Query: 132 aggtggcagcggtggccggcgagaagcgcgcggcggcgctgacgtccgggtccatctact 191 |||||| ||||||||||||| |||| ||||||||||||||||| | |||||||||| Sbjct: 509 aggtggaggcggtggccggcgggaagaaggcggcggcgctgacgtcggagtccatctacg 568 Query: 192 tggtgagcgccgggacgagcgactacgtgcagaactactacgtcaacgccatgctcgccg 251 |||| |||||||| || ||||||| |||||||||||||||||||||| | ||||| | || Sbjct: 569 tggtcagcgccggcaccagcgacttcgtgcagaactactacgtcaacccgatgctgggcg 628 Query: 252 ccgcctacacccccgaccagttcgccgacgcgctcatgcagccattcacggccttcgtcg 311 || |||||||||||||||||||| |||||| ||||||||||| ||||| ||||| ||| Sbjct: 629 ccacctacacccccgaccagttctccgacgtcctcatgcagcccttcaccaccttcatcg 688 Query: 312 agaggctgtacgggctgggcgcacggcggatcggggtgacgtcgctgccgcccatggggt 371 || |||||||||| | ||| || |||||||||| ||||||||||||||||| ||||||| Sbjct: 689 aggggctgtacggacagggggcgaggcggatcggcgtgacgtcgctgccgccgatggggt 748 Query: 372 gcctcccggcgtc 384 ||||||||||||| Sbjct: 749 gcctcccggcgtc 761
>dbj|AK099266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013F22, full insert sequence Length = 1508 Score = 383 bits (193), Expect = e-103 Identities = 328/373 (87%) Strand = Plus / Plus Query: 12 ccctcctccacggcgccaacttcgcctccggcgccgccggctacctcgacgccaccgccg 71 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 402 ccctcctccacggcgccaacttcgcctccggcgcctccggctacctcgacaccaccgcct 461 Query: 72 cgctctacggagcgatctcgctggggcggcagctggactacttcaaggagtaccagtcga 131 | |||||||| ||||| |||||| | |||||||||| ||||||||||||||| || ||| Sbjct: 462 ccctctacggggcgatatcgctgagccggcagctggggtacttcaaggagtacaagacga 521 Query: 132 aggtggcagcggtggccggcgagaagcgcgcggcggcgctgacgtccgggtccatctact 191 |||||| ||||||||||||| |||| ||||||||||||||||| | |||||||||| Sbjct: 522 aggtggaggcggtggccggcgggaagaaggcggcggcgctgacgtcggagtccatctacg 581 Query: 192 tggtgagcgccgggacgagcgactacgtgcagaactactacgtcaacgccatgctcgccg 251 |||| |||||||| || ||||||| |||||||||||||||||||||| | ||||| | || Sbjct: 582 tggtcagcgccggcaccagcgacttcgtgcagaactactacgtcaacccgatgctgggcg 641 Query: 252 ccgcctacacccccgaccagttcgccgacgcgctcatgcagccattcacggccttcgtcg 311 || |||||||||||||||||||| |||||| ||||||||||| ||||| ||||| ||| Sbjct: 642 ccacctacacccccgaccagttctccgacgtcctcatgcagcccttcaccaccttcatcg 701 Query: 312 agaggctgtacgggctgggcgcacggcggatcggggtgacgtcgctgccgcccatggggt 371 || |||||||||| | ||| || |||||||||| ||||||||||||||||| ||||||| Sbjct: 702 aggggctgtacggacagggggcgaggcggatcggcgtgacgtcgctgccgccgatggggt 761 Query: 372 gcctcccggcgtc 384 ||||||||||||| Sbjct: 762 gcctcccggcgtc 774
>dbj|AK060516.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-A02, full insert sequence Length = 1482 Score = 367 bits (185), Expect = 2e-98 Identities = 326/373 (87%) Strand = Plus / Plus Query: 12 ccctcctccacggcgccaacttcgcctccggcgccgccggctacctcgacgccaccgccg 71 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 401 ccctcctccacggcgccaacttcgcctccggcgcctccggctacctcgacaccaccgcct 460 Query: 72 cgctctacggagcgatctcgctggggcggcagctggactacttcaaggagtaccagtcga 131 | |||||||| ||||| |||||| | |||||||||| ||||||||||||||| || ||| Sbjct: 461 ccctctacggggcgatatcgctgagccggcagctggggtacttcaaggagtacaagacga 520 Query: 132 aggtggcagcggtggccggcgagaagcgcgcggcggcgctgacgtccgggtccatctact 191 |||||| ||||||||||||| |||| ||||||||||||||||| | | |||||||| Sbjct: 521 aggtggaggcggtggccggcgggaagaaggcggcggcgctgacgtcggagcccatctacg 580 Query: 192 tggtgagcgccgggacgagcgactacgtgcagaactactacgtcaacgccatgctcgccg 251 |||| |||||||| || ||||||| |||||||||||||||||||||| | ||||| | || Sbjct: 581 tggtcagcgccggcaccagcgacttcgtgcagaactactacgtcaacccgatgctgggcg 640 Query: 252 ccgcctacacccccgaccagttcgccgacgcgctcatgcagccattcacggccttcgtcg 311 || |||||||||||||||||||| |||||| ||||||||||| ||||| ||||| ||| Sbjct: 641 ccacctacacccccgaccagttctccgacgtcctcatgcagcccttcaccaccttcatcg 700 Query: 312 agaggctgtacgggctgggcgcacggcggatcggggtgacgtcgctgccgcccatggggt 371 || ||||||||| | ||| || |||||||||| ||||||||||||||||| ||||||| Sbjct: 701 aggagctgtacggacagggggcgaggcggatcggcgtgacgtcgctgccgccgatggggt 760 Query: 372 gcctcccggcgtc 384 ||||||||||||| Sbjct: 761 gcctcccggcgtc 773
>gb|AY107654.1| Zea mays PCO095720 mRNA sequence Length = 972 Score = 278 bits (140), Expect = 2e-71 Identities = 242/276 (87%) Strand = Plus / Plus Query: 118 ggagtaccagtcgaaggtggcagcggtggccggcgagaagcgcgcggcggcgctgacgtc 177 ||||||||||||| ||||| ||| |||||||||| ||||||| || ||||||||| Sbjct: 50 ggagtaccagtcgcgggtgggcgcgtcggccggcgagcagcgcgcccgggagctgacgtc 109 Query: 178 cgggtccatctacttggtgagcgccgggacgagcgactacgtgcagaactactacgtcaa 237 ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| || Sbjct: 110 cgggtccatctacgtggtgagcgccggcaccagcgactacgtgcagaactactacgtgaa 169 Query: 238 cgccatgctcgccgccgcctacacccccgaccagttcgccgacgcgctcatgcagccatt 297 | | ||||| |||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 170 cccgatgctgagcgccgcctacacgcccgaccagttcgccgacgcgctcatgcagccctt 229 Query: 298 cacggccttcgtcgagaggctgtacgggctgggcgcacggcggatcggggtgacgtcgct 357 ||| ||||||||||| | |||||| | |||||||| || |||||||| ||||||||||| Sbjct: 230 cacctccttcgtcgagggcctgtacagcctgggcgcccgccggatcggcgtgacgtcgct 289 Query: 358 gccgcccatggggtgcctcccggcgtccgtcaccct 393 |||||| |||||||| |||||||||||||| ||||| Sbjct: 290 gccgccgatggggtgtctcccggcgtccgtgaccct 325
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 204 bits (103), Expect = 2e-49 Identities = 199/231 (86%) Strand = Plus / Plus Query: 83 gcgatctcgctggggcggcagctggactacttcaaggagtaccagtcgaaggtggcagcg 142 ||||| |||||| | |||||||||| ||||||||||||||| || ||||||||| ||| Sbjct: 26961712 gcgatatcgctgagccggcagctggggtacttcaaggagtacaagacgaaggtggaggcg 26961771 Query: 143 gtggccggcgagaagcgcgcggcggcgctgacgtccgggtccatctacttggtgagcgcc 202 |||||||||| |||| ||||||||||||||||| | |||||||||| |||| |||||| Sbjct: 26961772 gtggccggcgggaagaaggcggcggcgctgacgtcggagtccatctacgtggtcagcgcc 26961831 Query: 203 gggacgagcgactacgtgcagaactactacgtcaacgccatgctcgccgccgcctacacc 262 || || ||||||| |||||||||||||||||||||| | ||||| | |||| |||||||| Sbjct: 26961832 ggcaccagcgacttcgtgcagaactactacgtcaacccgatgctgggcgccacctacacc 26961891 Query: 263 cccgaccagttcgccgacgcgctcatgcagccattcacggccttcgtcgag 313 |||||||||||| |||||| ||||||||||| ||||| ||||| ||||| Sbjct: 26961892 cccgaccagttctccgacgtcctcatgcagcccttcaccaccttcatcgag 26961942 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 12 ccctcctccacggcgccaacttcgcctccggcgccgccggctacctcgacgccaccgccg 71 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 26960978 ccctcctccacggcgccaacttcgcctccggcgcctccggctacctcgacaccaccgcct 26961037 Query: 72 cgctctacg 80 | ||||||| Sbjct: 26961038 ccctctacg 26961046 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 315 ggctgtacgggctgggcgcacggcggatcggggtgacgtcgctgccgcccatggggtgcc 374 |||||||||| | ||| || |||||||||| ||||||||||||||||| |||||||||| Sbjct: 26964107 ggctgtacggacagggggcgaggcggatcggcgtgacgtcgctgccgccgatggggtgcc 26964166 Query: 375 tcccggcgtc 384 |||||||||| Sbjct: 26964167 tcccggcgtc 26964176 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 34624287 agctggactacttcaaggagtac 34624265 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 3096218 agctggactacttcaaggagtac 3096240 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 cttcgcctccggcgccgccgg 51 ||||||||||||||||||||| Sbjct: 35669775 cttcgcctccggcgccgccgg 35669755 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 agcgcgcggcggcgctgacg 175 |||||||||||||||||||| Sbjct: 9918900 agcgcgcggcggcgctgacg 9918919
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 204 bits (103), Expect = 2e-49 Identities = 199/231 (86%) Strand = Plus / Plus Query: 83 gcgatctcgctggggcggcagctggactacttcaaggagtaccagtcgaaggtggcagcg 142 ||||| |||||| | |||||||||| ||||||||||||||| || ||||||||| ||| Sbjct: 140712 gcgatatcgctgagccggcagctggggtacttcaaggagtacaagacgaaggtggaggcg 140771 Query: 143 gtggccggcgagaagcgcgcggcggcgctgacgtccgggtccatctacttggtgagcgcc 202 |||||||||| |||| ||||||||||||||||| | |||||||||| |||| |||||| Sbjct: 140772 gtggccggcgggaagaaggcggcggcgctgacgtcggagtccatctacgtggtcagcgcc 140831 Query: 203 gggacgagcgactacgtgcagaactactacgtcaacgccatgctcgccgccgcctacacc 262 || || ||||||| |||||||||||||||||||||| | ||||| | |||| |||||||| Sbjct: 140832 ggcaccagcgacttcgtgcagaactactacgtcaacccgatgctgggcgccacctacacc 140891 Query: 263 cccgaccagttcgccgacgcgctcatgcagccattcacggccttcgtcgag 313 |||||||||||| |||||| ||||||||||| ||||| ||||| ||||| Sbjct: 140892 cccgaccagttctccgacgtcctcatgcagcccttcaccaccttcatcgag 140942 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 12 ccctcctccacggcgccaacttcgcctccggcgccgccggctacctcgacgccaccgccg 71 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 139978 ccctcctccacggcgccaacttcgcctccggcgcctccggctacctcgacaccaccgcct 140037 Query: 72 cgctctacg 80 | ||||||| Sbjct: 140038 ccctctacg 140046 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 315 ggctgtacgggctgggcgcacggcggatcggggtgacgtcgctgccgcccatggggtgcc 374 |||||||||| | ||| || |||||||||| ||||||||||||||||| |||||||||| Sbjct: 143107 ggctgtacggacagggggcgaggcggatcggcgtgacgtcgctgccgccgatggggtgcc 143166 Query: 375 tcccggcgtc 384 |||||||||| Sbjct: 143167 tcccggcgtc 143176
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 204 bits (103), Expect = 2e-49 Identities = 199/231 (86%) Strand = Plus / Plus Query: 83 gcgatctcgctggggcggcagctggactacttcaaggagtaccagtcgaaggtggcagcg 142 ||||| |||||| | |||||||||| ||||||||||||||| || ||||||||| ||| Sbjct: 27053035 gcgatatcgctgagccggcagctggggtacttcaaggagtacaagacgaaggtggaggcg 27053094 Query: 143 gtggccggcgagaagcgcgcggcggcgctgacgtccgggtccatctacttggtgagcgcc 202 |||||||||| |||| ||||||||||||||||| | |||||||||| |||| |||||| Sbjct: 27053095 gtggccggcgggaagaaggcggcggcgctgacgtcggagtccatctacgtggtcagcgcc 27053154 Query: 203 gggacgagcgactacgtgcagaactactacgtcaacgccatgctcgccgccgcctacacc 262 || || ||||||| |||||||||||||||||||||| | ||||| | |||| |||||||| Sbjct: 27053155 ggcaccagcgacttcgtgcagaactactacgtcaacccgatgctgggcgccacctacacc 27053214 Query: 263 cccgaccagttcgccgacgcgctcatgcagccattcacggccttcgtcgag 313 |||||||||||| |||||| ||||||||||| ||||| ||||| ||||| Sbjct: 27053215 cccgaccagttctccgacgtcctcatgcagcccttcaccaccttcatcgag 27053265 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 12 ccctcctccacggcgccaacttcgcctccggcgccgccggctacctcgacgccaccgccg 71 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 27052301 ccctcctccacggcgccaacttcgcctccggcgcctccggctacctcgacaccaccgcct 27052360 Query: 72 cgctctacg 80 | ||||||| Sbjct: 27052361 ccctctacg 27052369 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 315 ggctgtacgggctgggcgcacggcggatcggggtgacgtcgctgccgcccatggggtgcc 374 |||||||||| | ||| || |||||||||| ||||||||||||||||| |||||||||| Sbjct: 27055430 ggctgtacggacagggggcgaggcggatcggcgtgacgtcgctgccgccgatggggtgcc 27055489 Query: 375 tcccggcgtc 384 |||||||||| Sbjct: 27055490 tcccggcgtc 27055499 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 34714359 agctggactacttcaaggagtac 34714337 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 3096329 agctggactacttcaaggagtac 3096351 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 cttcgcctccggcgccgccgg 51 ||||||||||||||||||||| Sbjct: 35759848 cttcgcctccggcgccgccgg 35759828 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 agcgcgcggcggcgctgacg 175 |||||||||||||||||||| Sbjct: 9917021 agcgcgcggcggcgctgacg 9917040
>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete sequence Length = 111882 Score = 204 bits (103), Expect = 2e-49 Identities = 199/231 (86%) Strand = Plus / Minus Query: 83 gcgatctcgctggggcggcagctggactacttcaaggagtaccagtcgaaggtggcagcg 142 ||||| |||||| | |||||||||| ||||||||||||||| || ||||||||| ||| Sbjct: 97687 gcgatatcgctgagccggcagctggggtacttcaaggagtacaagacgaaggtggaggcg 97628 Query: 143 gtggccggcgagaagcgcgcggcggcgctgacgtccgggtccatctacttggtgagcgcc 202 |||||||||| |||| ||||||||||||||||| | |||||||||| |||| |||||| Sbjct: 97627 gtggccggcgggaagaaggcggcggcgctgacgtcggagtccatctacgtggtcagcgcc 97568 Query: 203 gggacgagcgactacgtgcagaactactacgtcaacgccatgctcgccgccgcctacacc 262 || || ||||||| |||||||||||||||||||||| | ||||| | |||| |||||||| Sbjct: 97567 ggcaccagcgacttcgtgcagaactactacgtcaacccgatgctgggcgccacctacacc 97508 Query: 263 cccgaccagttcgccgacgcgctcatgcagccattcacggccttcgtcgag 313 |||||||||||| |||||| ||||||||||| ||||| ||||| ||||| Sbjct: 97507 cccgaccagttctccgacgtcctcatgcagcccttcaccaccttcatcgag 97457 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Minus Query: 12 ccctcctccacggcgccaacttcgcctccggcgccgccggctacctcgacgccaccgccg 71 ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 98421 ccctcctccacggcgccaacttcgcctccggcgcctccggctacctcgacaccaccgcct 98362 Query: 72 cgctctacg 80 | ||||||| Sbjct: 98361 ccctctacg 98353 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 315 ggctgtacgggctgggcgcacggcggatcggggtgacgtcgctgccgcccatggggtgcc 374 |||||||||| | ||| || |||||||||| ||||||||||||||||| |||||||||| Sbjct: 95292 ggctgtacggacagggggcgaggcggatcggcgtgacgtcgctgccgccgatggggtgcc 95233 Query: 375 tcccggcgtc 384 |||||||||| Sbjct: 95232 tcccggcgtc 95223
>gb|AY103951.1| Zea mays PCO106933 mRNA sequence Length = 2052 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 100 gcagctggactacttcaaggagtaccagtcgaaggtggcagcggtggccggcg 152 ||||||||| ||||||| |||||||||| ||||| |||| ||||||||||||| Sbjct: 1647 gcagctggagtacttcagggagtaccagacgaagctggcggcggtggccggcg 1699 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 350 acgtcgctgccgcccatggggtgcctcccggcgtccgtcac 390 |||||||||||||| |||| ||||| ||||||||| |||| Sbjct: 1897 acgtcgctgccgccgctgggctgcctgccggcgtccatcac 1937 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 agcgactacgtgcagaactactac 232 ||||||| |||||||||||||||| Sbjct: 1756 agcgacttcgtgcagaactactac 1779
>ref|NM_191862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1092 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 15 tcctccacggcgccaacttcgcctccggcgccgccgg 51 ||||| ||||||||||||||||||||| ||||||||| Sbjct: 305 tcctcaacggcgccaacttcgcctccgccgccgccgg 341 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 257 tacacccccgaccagttcgccgacgcgctcat 288 ||||| ||||| |||||||||||| ||||||| Sbjct: 559 tacactcccgagcagttcgccgactcgctcat 590
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 15 tcctccacggcgccaacttcgcctccggcgccgccgg 51 ||||| ||||||||||||||||||||| ||||||||| Sbjct: 30356066 tcctcaacggcgccaacttcgcctccgccgccgccgg 30356102 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 20 cacggcgccaacttcgcctccggcgccgcc 49 |||||||||||||||||| |||||||||| Sbjct: 6727086 cacggcgccaacttcgccgtcggcgccgcc 6727057 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 ctcctccacggcgccaacttc 34 ||||||||||||||||||||| Sbjct: 27927931 ctcctccacggcgccaacttc 27927911 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 257 tacacccccgaccagttcgccgacgcgctcat 288 ||||| ||||| |||||||||||| ||||||| Sbjct: 30356410 tacactcccgagcagttcgccgactcgctcat 30356441 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tccacggcgccaacttcgcc 37 |||||||||||||||||||| Sbjct: 24748343 tccacggcgccaacttcgcc 24748362 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 17888774 cggcgccaacttcgcctccg 17888755
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 15 tcctccacggcgccaacttcgcctccggcgccgccgg 51 ||||| ||||||||||||||||||||| ||||||||| Sbjct: 144385 tcctcaacggcgccaacttcgcctccgccgccgccgg 144421 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 257 tacacccccgaccagttcgccgacgcgctcat 288 ||||| ||||| |||||||||||| ||||||| Sbjct: 144729 tacactcccgagcagttcgccgactcgctcat 144760
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 15 tcctccacggcgccaacttcgcctccggcgccgccgg 51 ||||| ||||||||||||||||||||| ||||||||| Sbjct: 41793 tcctcaacggcgccaacttcgcctccgccgccgccgg 41829 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 257 tacacccccgaccagttcgccgacgcgctcat 288 ||||| ||||| |||||||||||| ||||||| Sbjct: 42137 tacactcccgagcagttcgccgactcgctcat 42168
>dbj|AK070946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074K21, full insert sequence Length = 2149 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 15 tcctccacggcgccaacttcgcctccggcgccgccgg 51 ||||| ||||||||||||||||||||| ||||||||| Sbjct: 946 tcctcaacggcgccaacttcgcctccgccgccgccgg 982 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 257 tacacccccgaccagttcgccgacgcgctcat 288 ||||| ||||| |||||||||||| ||||||| Sbjct: 1200 tacactcccgagcagttcgccgactcgctcat 1231
>gb|AY194234.1| Oryza sativa (japonica cultivar-group) putative lipase (LIP1) gene, complete cds Length = 2664 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 327 tgggcgcacggcggatcggggtgacgtcgctgccgcccatggggtgcctcccggcg 382 |||| |||||||| ||||| ||||||||||||||||| |||| ||||| |||||| Sbjct: 1832 tgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgcctaccggcg 1887 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 105 tggactacttcaaggagtaccagtcgaaggtggcagcggtggccgg 150 |||| ||||||||||||||||| || ||| ||||||| |||||||| Sbjct: 1476 tggagtacttcaaggagtaccaatctaagctggcagccgtggccgg 1521
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 327 tgggcgcacggcggatcggggtgacgtcgctgccgcccatggggtgcctcccggcg 382 |||| |||||||| ||||| ||||||||||||||||| |||| ||||| |||||| Sbjct: 2515895 tgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgcctaccggcg 2515950 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 16 cctccacggcgccaacttcgcctccggcgccgccggctacctcgac 61 ||||||||||| ||||||||||||||||| | ||||| ||||||| Sbjct: 21100369 cctccacggcgtcaacttcgcctccggcggctccggcatcctcgac 21100414 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 105 tggactacttcaaggagtaccagtcgaaggtggcagcggtggccgg 150 |||| ||||||||||||||||| || ||| ||||||| |||||||| Sbjct: 2515539 tggagtacttcaaggagtaccaatctaagctggcagccgtggccgg 2515584 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 aacgccatgctcgccgccgcc 256 ||||||||||||||||||||| Sbjct: 2581781 aacgccatgctcgccgccgcc 2581761
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 327 tgggcgcacggcggatcggggtgacgtcgctgccgcccatggggtgcctcccggcg 382 |||| |||||||| ||||| ||||||||||||||||| |||| ||||| |||||| Sbjct: 147353 tgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgcctaccggcg 147408 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 105 tggactacttcaaggagtaccagtcgaaggtggcagcggtggccgg 150 |||| ||||||||||||||||| || ||| ||||||| |||||||| Sbjct: 146997 tggagtacttcaaggagtaccaatctaagctggcagccgtggccgg 147042
>dbj|AP003632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624B04 Length = 72745 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 327 tgggcgcacggcggatcggggtgacgtcgctgccgcccatggggtgcctcccggcg 382 |||| |||||||| ||||| ||||||||||||||||| |||| ||||| |||||| Sbjct: 15097 tgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgcctaccggcg 15152 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 105 tggactacttcaaggagtaccagtcgaaggtggcagcggtggccgg 150 |||| ||||||||||||||||| || ||| ||||||| |||||||| Sbjct: 14741 tggagtacttcaaggagtaccaatctaagctggcagccgtggccgg 14786
>dbj|AK109420.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D07, full insert sequence Length = 1257 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 327 tgggcgcacggcggatcggggtgacgtcgctgccgcccatggggtgcctcccggcg 382 |||| |||||||| ||||| ||||||||||||||||| |||| ||||| |||||| Sbjct: 690 tgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgcctaccggcg 745 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 105 tggactacttcaaggagtaccagtcgaaggtggcagcggtggccgg 150 |||| ||||||||||||||||| || ||| ||||||| |||||||| Sbjct: 468 tggagtacttcaaggagtaccaatctaagctggcagccgtggccgg 513
>dbj|AK073593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046C23, full insert sequence Length = 1246 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 327 tgggcgcacggcggatcggggtgacgtcgctgccgcccatggggtgcctcccggcg 382 |||| |||||||| ||||| ||||||||||||||||| |||| ||||| |||||| Sbjct: 676 tgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgcctaccggcg 731 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 105 tggactacttcaaggagtaccagtcgaaggtggcagcggtggccgg 150 |||| ||||||||||||||||| || ||| ||||||| |||||||| Sbjct: 454 tggagtacttcaaggagtaccaatctaagctggcagccgtggccgg 499
>dbj|AK060175.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A01, full insert sequence Length = 1353 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 327 tgggcgcacggcggatcggggtgacgtcgctgccgcccatggggtgcctcccggcg 382 |||| |||||||| ||||| ||||||||||||||||| |||| ||||| |||||| Sbjct: 671 tgggagcacggcgcatcggcgtgacgtcgctgccgccgttgggctgcctaccggcg 726 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 105 tggactacttcaaggagtaccagtcgaaggtggcagcggtggccgg 150 |||| ||||||||||||||||| || ||| ||||||| |||||||| Sbjct: 449 tggagtacttcaaggagtaccaatctaagctggcagccgtggccgg 494
>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E12 Length = 139750 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 16 cctccacggcgccaacttcgcctccggcgccgccggctacctcgac 61 ||||||||||| ||||||||||||||||| | ||||| ||||||| Sbjct: 97370 cctccacggcgtcaacttcgcctccggcggctccggcatcctcgac 97415
>dbj|AK063332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A03, full insert sequence Length = 1349 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 16 cctccacggcgccaacttcgcctccggcgccgccggctacctcgac 61 ||||||||||| ||||||||||||||||| | ||||| ||||||| Sbjct: 416 cctccacggcgtcaacttcgcctccggcggctccggcatcctcgac 461
>ref|XM_483839.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1523 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 17 ctccacggcgccaacttcgcctccg 41 ||||||||||||||||||||||||| Sbjct: 438 ctccacggcgccaacttcgcctccg 462
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 17 ctccacggcgccaacttcgcctccg 41 ||||||||||||||||||||||||| Sbjct: 28339572 ctccacggcgccaacttcgcctccg 28339596 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 23 ggcgccaacttcgcctccggcgccgccggctacctcgacg 62 |||| |||||||||||||| |||||||||| |||||||| Sbjct: 686279 ggcgtcaacttcgcctccgccgccgccggcatcctcgacg 686318
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 17 ctccacggcgccaacttcgcctccg 41 ||||||||||||||||||||||||| Sbjct: 68378 ctccacggcgccaacttcgcctccg 68402
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 17 ctccacggcgccaacttcgcctccg 41 ||||||||||||||||||||||||| Sbjct: 131387 ctccacggcgccaacttcgcctccg 131411
>dbj|AK106778.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H02, full insert sequence Length = 1523 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 17 ctccacggcgccaacttcgcctccg 41 ||||||||||||||||||||||||| Sbjct: 438 ctccacggcgccaacttcgcctccg 462
>ref|XM_507096.1| PREDICTED Oryza sativa (japonica cultivar-group), P0498H04.26 mRNA Length = 1449 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 23 ggcgccaacttcgcctccggcgccgccggctacctcgacg 62 |||| |||||||||||||| |||||||||| |||||||| Sbjct: 388 ggcgtcaacttcgcctccgccgccgccggcatcctcgacg 427
>ref|XM_479754.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1327 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 23 ggcgccaacttcgcctccggcgccgccggctacctcgacg 62 |||| |||||||||||||| |||||||||| |||||||| Sbjct: 396 ggcgtcaacttcgcctccgccgccgccggcatcctcgacg 435
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 23 ggcgccaacttcgcctccggcgccgccggctacctcgacg 62 |||| |||||||||||||| |||||||||| |||||||| Sbjct: 113657 ggcgtcaacttcgcctccgccgccgccggcatcctcgacg 113696
>dbj|AK105876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B10, full insert sequence Length = 1449 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 23 ggcgccaacttcgcctccggcgccgccggctacctcgacg 62 |||| |||||||||||||| |||||||||| |||||||| Sbjct: 388 ggcgtcaacttcgcctccgccgccgccggcatcctcgacg 427
>dbj|AK069672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A20, full insert sequence Length = 1327 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 23 ggcgccaacttcgcctccggcgccgccggctacctcgacg 62 |||| |||||||||||||| |||||||||| |||||||| Sbjct: 396 ggcgtcaacttcgcctccgccgccgccggcatcctcgacg 435
>ref|NM_185081.1| Oryza sativa (japonica cultivar-group), mRNA Length = 612 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 11 agctggactacttcaaggagtac 33
>ref|XM_464399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1134 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 452 agctggactacttcaaggagtac 474
>ref|XM_473407.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1101 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 329 agctggactacttcaaggagtac 351
>gb|AY022804.1| Oryza sativa microsatellite MRG5129 containing (CGC)X8, closest to marker S2652, genomic sequence Length = 224 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 183 agctggactacttcaaggagtac 161
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 130382 agctggactacttcaaggagtac 130360
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 82004 agctggactacttcaaggagtac 81982
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 19231 agctggactacttcaaggagtac 19253
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 46940 agctggactacttcaaggagtac 46918
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 43 agctggactacttcaaggagtac 21
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 27395786 agctggactacttcaaggagtac 27395764 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 25342728 cggcgccaacttcgcctccg 25342747
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 23133848 agctggactacttcaaggagtac 23133870 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 caacttcgcctccggcgccgccgg 51 ||||||||||||||| |||||||| Sbjct: 10070759 caacttcgcctccggggccgccgg 10070736
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 4943291 agctggactacttcaaggagtac 4943313
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 19046 agctggactacttcaaggagtac 19068
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 14417 agctggactacttcaaggagtac 14439
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 88030 agctggactacttcaaggagtac 88052
>dbj|AK108567.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C12, full insert sequence Length = 1426 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 465 agctggactacttcaaggagtac 487
>dbj|AK062544.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-G05, full insert sequence Length = 1046 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 920 agctggactacttcaaggagtac 898
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 23062039 agctggactacttcaaggagtac 23062061 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 caacttcgcctccggcgccgccgg 51 ||||||||||||||| |||||||| Sbjct: 10070644 caacttcgcctccggggccgccgg 10070621
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 102 agctggactacttcaaggagtac 124 ||||||||||||||||||||||| Sbjct: 44549 agctggactacttcaaggagtac 44527
>ref|NM_188520.1| Oryza sativa (japonica cultivar-group), Ozsa8189 predicted mRNA Length = 1140 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 20 cacggcgccaacttcgcctccggcgccgcc 49 |||||||||||||||||| |||||||||| Sbjct: 337 cacggcgccaacttcgccgtcggcgccgcc 366
>gb|AC120534.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0084A20, complete sequence Length = 139391 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 aacttcgcctccggcgccgccg 50 |||||||||||||||||||||| Sbjct: 84963 aacttcgcctccggcgccgccg 84942
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 31 cttcgcctccggcgccgccggc 52 |||||||||||||||||||||| Sbjct: 3158017 cttcgcctccggcgccgccggc 3157996 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 acggcgccaacttcgcctccgg 42 |||||||||||||||||||||| Sbjct: 1385255 acggcgccaacttcgcctccgg 1385234 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tcgcctccggcgccgccggc 52 |||||||||||||||||||| Sbjct: 3157409 tcgcctccggcgccgccggc 3157390
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 31 cttcgcctccggcgccgccggc 52 |||||||||||||||||||||| Sbjct: 302823 cttcgcctccggcgccgccggc 302802 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tcgcctccggcgccgccggc 52 |||||||||||||||||||| Sbjct: 302215 tcgcctccggcgccgccggc 302196
>ref|XM_744489.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g04510) partial mRNA Length = 1623 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 34 cgcctccggcgccgccggctacctcgacgccacc 67 |||||||||||||||| |||||||| ||||||| Sbjct: 549 cgcctccggcgccgccccctacctcgccgccacc 582
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 31 cttcgcctccggcgccgccggc 52 |||||||||||||||||||||| Sbjct: 44770 cttcgcctccggcgccgccggc 44749 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tcgcctccggcgccgccggc 52 |||||||||||||||||||| Sbjct: 44162 tcgcctccggcgccgccggc 44143
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 acggcgccaacttcgcctccgg 42 |||||||||||||||||||||| Sbjct: 2724 acggcgccaacttcgcctccgg 2703
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 acggcgccaacttcgcctccgg 42 |||||||||||||||||||||| Sbjct: 72411 acggcgccaacttcgcctccgg 72390
>gb|AE012086.1| Xanthomonas axonopodis pv. citri str. 306, section 464 of 469 of the complete genome Length = 10940 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 46 cgccggctacctcgacgccaccgccg 71 ||||||||||||| |||||||||||| Sbjct: 958 cgccggctacctcaacgccaccgccg 983
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 aacttcgcctccggcgccgccg 50 |||||||||||||||||||||| Sbjct: 2944150 aacttcgcctccggcgccgccg 2944129
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 20 cacggcgccaacttcgcctccggcgccgcc 49 |||||||||||||||||| |||||||||| Sbjct: 79238 cacggcgccaacttcgccgtcggcgccgcc 79209
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 20 cacggcgccaacttcgcctccggcgccgcc 49 |||||||||||||||||| |||||||||| Sbjct: 9147 cacggcgccaacttcgccgtcggcgccgcc 9118
>dbj|AK067352.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101L22, full insert sequence Length = 1408 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 20 cacggcgccaacttcgcctccggcgccgcc 49 |||||||||||||||||| |||||||||| Sbjct: 350 cacggcgccaacttcgccgtcggcgccgcc 379
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 aacttcgcctccggcgccgccg 50 |||||||||||||||||||||| Sbjct: 2953181 aacttcgcctccggcgccgccg 2953160
>ref|NM_192034.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1206 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 ctcctccacggcgccaacttc 34 ||||||||||||||||||||| Sbjct: 655 ctcctccacggcgccaacttc 675
>ref|XM_470447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 819 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 cttcgcctccggcgccgccgg 51 ||||||||||||||||||||| Sbjct: 57 cttcgcctccggcgccgccgg 37
>gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence Length = 114045 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 141 cggtggccggcgagaagcgcgcggcggcg 169 ||||||||| |||||||||||| |||||| Sbjct: 34780 cggtggccgccgagaagcgcgccgcggcg 34808
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 actacgtcaacgccatgctcgccgccgcc 256 ||||||||| ||||||| ||||||||||| Sbjct: 5535125 actacgtcagcgccatggtcgccgccgcc 5535153
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 cttcgcctccggcgccgccgg 51 ||||||||||||||||||||| Sbjct: 67553 cttcgcctccggcgccgccgg 67533
>gb|AY657045.1| Synthetic construct Peudomonas aeruginosa clone FLH031886.01F PA5269 gene, partial cds Length = 276 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 tcaacgccatgctcgccgccg 254 ||||||||||||||||||||| Sbjct: 185 tcaacgccatgctcgccgccg 205
>gb|AY349011.1| Burkholderia cepacia phage Bcep22, complete genome Length = 63882 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggccggcgagaagcgcgcggcggcg 169 |||||||| |||||||||||||||| Sbjct: 23379 ggccggcgtgaagcgcgcggcggcg 23403
>gb|AY772719.1| Ajellomyces capsulatus Sec31 mRNA, partial cds Length = 3819 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 tgacgtcgctgccgcccatgg 368 ||||||||||||||||||||| Sbjct: 2307 tgacgtcgctgccgcccatgg 2327
>gb|AE004939.1| Pseudomonas aeruginosa PAO1, section 500 of 529 of the complete genome Length = 10294 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 tcaacgccatgctcgccgccg 254 ||||||||||||||||||||| Sbjct: 8923 tcaacgccatgctcgccgccg 8943
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 ctcctccacggcgccaacttc 34 ||||||||||||||||||||| Sbjct: 114612 ctcctccacggcgccaacttc 114592
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 aacgccatgctcgccgccgcc 256 ||||||||||||||||||||| Sbjct: 37122 aacgccatgctcgccgccgcc 37102
>dbj|AK107736.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-G03, full insert sequence Length = 768 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 ctcctccacggcgccaacttc 34 ||||||||||||||||||||| Sbjct: 329 ctcctccacggcgccaacttc 349
>dbj|AK061374.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-F09, full insert sequence Length = 873 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 cttcgcctccggcgccgccgg 51 ||||||||||||||||||||| Sbjct: 111 cttcgcctccggcgccgccgg 91
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 tgctcgccgccgcctacacccccgaccag 271 ||||||||||| || |||||||||||||| Sbjct: 149696 tgctcgccgccaccgacacccccgaccag 149724
>ref|XM_476051.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3372 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 34 cgcctccggcgccgccggctacctcgacgcca 65 |||| ||| |||||||||| |||||||||||| Sbjct: 33 cgccgccgccgccgccggcgacctcgacgcca 2
>ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative early nodulin gene (Enod) related protein (OSJNBa0071K18.9), mRNA Length = 1384 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 341 cggcgccaacttcgcctccg 360
>ref|NM_192845.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 294 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tccacggcgccaacttcgcc 37 |||||||||||||||||||| Sbjct: 263 tccacggcgccaacttcgcc 244
>ref|XM_478919.1| Oryza sativa (japonica cultivar-group), mRNA Length = 879 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cttcgcctccggcgccgccg 50 |||||||||||||||||||| Sbjct: 75 cttcgcctccggcgccgccg 56
>ref|XM_473111.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1107 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 318 cggcgccaacttcgcctccg 337
>gb|BT018573.1| Zea mays clone EL01N0443D05.d mRNA sequence Length = 1450 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 acgccatgctcgccgccgcc 256 |||||||||||||||||||| Sbjct: 685 acgccatgctcgccgccgcc 666
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 34 cgcctccggcgccgccggctacctcgacgcca 65 |||| ||| |||||||||| |||||||||||| Sbjct: 380 cgccgccgccgccgccggcgacctcgacgcca 349
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 gggtgacgtcgctgccgcccatgg 368 |||||||||||| ||||||||||| Sbjct: 5340381 gggtgacgtcgccgccgcccatgg 5340358
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 103132 cggcgccaacttcgcctccg 103113
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctacctcgacgccaccgccgcgct 75 ||||| |||||||||||||||||| Sbjct: 293270 ctaccgcgacgccaccgccgcgct 293247
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 gctcgccgccgcctacacccccga 267 ||||||||||||| |||||||||| Sbjct: 7047 gctcgccgccgccgacacccccga 7024
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 126667 cggcgccaacttcgcctccg 126686
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 69287 cggcgccaacttcgcctccg 69306
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 34 cgcctccggcgccgccggctacctcgacgcca 65 |||| ||| |||||||||| |||||||||||| Sbjct: 88595 cgccgccgccgccgccggcgacctcgacgcca 88564
>ref|NM_176106.1| Drosophila melanogaster sticks and stones CG33141-RA (sns), mRNA Length = 8023 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggtggcagcggtggccggcg 152 |||||||||||||||||||| Sbjct: 4442 ggtggcagcggtggccggcg 4461
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tcgcctccggcgccgccggc 52 |||||||||||||||||||| Sbjct: 3986226 tcgcctccggcgccgccggc 3986207 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 cccgaccagttcgccgacgcgctc 286 |||||||||||||||| ||||||| Sbjct: 1223349 cccgaccagttcgccgccgcgctc 1223372
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 16557110 cggcgccaacttcgcctccg 16557129
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cttcgcctccggcgccgccg 50 |||||||||||||||||||| Sbjct: 23753948 cttcgcctccggcgccgccg 23753929
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 34 cgcctccggcgccgccggctacctcgacgcca 65 |||| ||| |||||||||| |||||||||||| Sbjct: 4113901 cgccgccgccgccgccggcgacctcgacgcca 4113870
>gb|AC007471.4|AC007471 Drosophila melanogaster, chromosome 2R, region 44F-45A, BAC clone BACR02C23, complete sequence Length = 168601 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggtggcagcggtggccggcg 152 |||||||||||||||||||| Sbjct: 45119 ggtggcagcggtggccggcg 45138
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cgccgccggctacctcgacg 62 |||||||||||||||||||| Sbjct: 4735744 cgccgccggctacctcgacg 4735763
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gccggcgagaagcgcgcggc 165 |||||||||||||||||||| Sbjct: 2291391 gccggcgagaagcgcgcggc 2291410
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 agcgcgcggcggcgctgacg 175 |||||||||||||||||||| Sbjct: 81289 agcgcgcggcggcgctgacg 81308
>gb|AF254867.1|AF254867 Drosophila melanogaster SNS (sns) mRNA, complete cds Length = 8035 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggtggcagcggtggccggcg 152 |||||||||||||||||||| Sbjct: 4448 ggtggcagcggtggccggcg 4467
>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0520B06 Length = 142667 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 8609 cggcgccaacttcgcctccg 8590
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455H03 Length = 175947 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 135896 cggcgccaacttcgcctccg 135877
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gctcgccgccgcctacaccc 263 |||||||||||||||||||| Sbjct: 3072848 gctcgccgccgcctacaccc 3072829
>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0407B12 Length = 148762 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tccacggcgccaacttcgcc 37 |||||||||||||||||||| Sbjct: 116920 tccacggcgccaacttcgcc 116939
>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1060_D03 Length = 102178 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cttcgcctccggcgccgccg 50 |||||||||||||||||||| Sbjct: 98562 cttcgcctccggcgccgccg 98543
>dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1113_E01 Length = 73706 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cttcgcctccggcgccgccg 50 |||||||||||||||||||| Sbjct: 8878 cttcgcctccggcgccgccg 8859
>gb|AE005106.1| Halobacterium sp. NRC-1 section 137 of 170 of the complete genome Length = 13219 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 acctcgacgccaccgccgcg 73 |||||||||||||||||||| Sbjct: 1453 acctcgacgccaccgccgcg 1434
>dbj|AK121383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127I10, full insert sequence Length = 1929 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 820 cggcgccaacttcgcctccg 839
>dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C12, full insert sequence Length = 1375 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 353 cggcgccaacttcgcctccg 372
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 239 gccatgctcgccgccgcctacacccccg 266 |||||| ||||||||| ||||||||||| Sbjct: 2506195 gccatggtcgccgccgactacacccccg 2506222
>dbj|AK063071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H02, full insert sequence Length = 987 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 caacttcgcctccggcgccgccgg 51 ||||||||||||||| |||||||| Sbjct: 397 caacttcgcctccggggccgccgg 420
>gb|AY623658.2| Aeromicrobium erythreum putative transcriptional repressor and putative dehydrogenase/reductase genes, complete cds; erythromycin biosynthesis gene cluster, complete sequence; putative oxidoreductase and LipN genes, complete cds; monoamine oxidase gene, partial cds; and unknown gene Length = 61845 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gccggctacctcgacgccaccgccgcgc 74 |||| ||||||||| ||||||||||||| Sbjct: 40120 gccgcctacctcgaggccaccgccgcgc 40093
>gb|AE003835.4| Drosophila melanogaster chromosome 2R, section 15 of 73 of the complete sequence Length = 271696 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggtggcagcggtggccggcg 152 |||||||||||||||||||| Sbjct: 58239 ggtggcagcggtggccggcg 58258
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cggcgccaacttcgcctccg 41 |||||||||||||||||||| Sbjct: 16565351 cggcgccaacttcgcctccg 16565370
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 caacttcgcctccggcgccgccgg 51 ||||||||||||||| |||||||| Sbjct: 91862 caacttcgcctccggggccgccgg 91885 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,520,988 Number of Sequences: 3902068 Number of extensions: 2520988 Number of successful extensions: 62628 Number of sequences better than 10.0: 119 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58647 Number of HSP's gapped (non-prelim): 3981 length of query: 459 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 437 effective length of database: 17,147,199,772 effective search space: 7493326300364 effective search space used: 7493326300364 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
