Clone Information

BLAST Search Result

Clone Name	bast56f01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CY12_SOLTU (P29610) Cytochrome c1, heme protein, mitochondrial p...	116	2e-26
2	CY11_SOLTU (P25076) Cytochrome c1, heme protein, mitochondrial p...	112	5e-25
3	CY1_HUMAN (P08574) Cytochrome c1, heme protein, mitochondrial pr...	71	1e-12
4	CY1_YEAST (P07143) Cytochrome c1, heme protein, mitochondrial pr...	70	2e-12
5	CY1_NEUCR (P07142) Cytochrome c1, heme protein, mitochondrial pr...	70	2e-12
6	CY1_MOUSE (Q9D0M3) Cytochrome c1, heme protein, mitochondrial pr...	70	3e-12
7	CY1_BOVIN (P00125) Cytochrome c1, heme protein, mitochondrial (C...	69	4e-12
8	CY1_KLULA (Q00988) Cytochrome c1, heme protein, mitochondrial pr...	69	4e-12
9	CY1_EUGGR (P20114) Cytochrome c1, heme protein	50	3e-06
10	CY1_RHORU (P23135) Cytochrome c1 precursor	49	4e-06
11	CYBC_BRAJA (P51131) Cytochrome b/c1 [Contains: Cytochrome b; Cyt...	47	3e-05
12	CY1_RHOVI (P81379) Cytochrome c1 precursor	47	3e-05
13	CY1_RHOCA (P08501) Cytochrome c1 precursor	45	6e-05
14	CY1_RHOSH (Q02760) Cytochrome c1 precursor	40	0.003
15	CY1_PARDE (P13627) Cytochrome c1 precursor	37	0.022
16	QCRC_MYCTU (P63887) Ubiquinol-cytochrome c reductase cytochrome ...	34	0.14
17	QCRC_MYCBO (P63888) Ubiquinol-cytochrome c reductase cytochrome ...	34	0.14
18	QCRC_MYCLE (O69583) Ubiquinol-cytochrome c reductase cytochrome ...	34	0.19
19	WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1	33	0.42
20	SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding fact...	31	1.6
21	GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region ge...	30	2.1
22	CY1_CHRVI (O31216) Cytochrome c1 precursor	30	2.7
23	ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor e...	30	2.7
24	SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,...	30	2.7
25	BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 ...	30	2.7
26	Y966_TREPA (O83932) Hypothetical protein TP0966 precursor	30	2.7
27	MOAE_RHILO (Q984P0) Molybdopterin-converting factor subunit 2 (M...	30	2.7
28	TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding prote...	30	3.5
29	ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor e...	30	3.5
30	TDG_MOUSE (P56581) G/T mismatch-specific thymine DNA glycosylase...	30	3.5
31	FMDC_METBF (Q48943) Molybdenum-containing formylmethanofuran deh...	29	4.6
32	GUNA_MICBI (P26414) Endoglucanase A precursor (EC 3.2.1.4) (Endo...	29	4.6
33	Y1854_AQUAE (O67706) Hypothetical protein aq_1854 precursor	29	6.0
34	PPGB_HUMAN (P10619) Lysosomal protective protein precursor (EC 3...	29	6.0
35	GLU2_MAIZE (P04706) Glutelin-2 precursor (Zein-gamma) (27 kDa ze...	29	6.0
36	DOC2B_MOUSE (P70169) Double C2-like domain-containing protein be...	29	6.0
37	BBR1_SCHCO (P78741) Pheromone B beta 1 receptor	29	6.0
38	DHET_GLUOX (O05542) Alcohol dehydrogenase [acceptor] precursor (...	29	6.0
39	QCRB_MYCLE (P15878) Ubiquinol-cytochrome c reductase cytochrome ...	28	7.9
40	WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7...	28	7.9
41	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	28	7.9
42	GP156_MOUSE (Q6PCP7) Probable G-protein coupled receptor 156 (GA...	28	7.9

>CY12_SOLTU (P29610) Cytochrome c1, heme protein, mitochondrial precursor|
           (Clone PC18I) (Fragment)
          Length = 260

 Score =  116 bits (291), Expect = 2e-26
 Identities = 52/59 (88%), Positives = 54/59 (91%)
 Frame = +2

Query: 272 FGTIASADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD 448
           F T+ASADEAEHGL    YPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSL+SYRD
Sbjct: 11  FATVASADEAEHGLECPSYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLVSYRD 69

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>CY11_SOLTU (P25076) Cytochrome c1, heme protein, mitochondrial precursor|
           (Clone PC13III)
          Length = 320

 Score =  112 bits (279), Expect = 5e-25
 Identities = 51/59 (86%), Positives = 52/59 (88%)
 Frame = +2

Query: 272 FGTIASADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD 448
           F TIA +DEAEHGL    YPWPH GILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD
Sbjct: 71  FATIAYSDEAEHGLECPNYPWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD 129

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>CY1_HUMAN (P08574) Cytochrome c1, heme protein, mitochondrial precursor|
           (Cytochrome c-1)
          Length = 325

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = +2

Query: 287 SADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYR 445
           SA + E  L    YPW H G+LSS DH SIRRG QVY+QVCASCHSM  ++YR
Sbjct: 83  SASDLE--LHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYR 133

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>CY1_YEAST (P07143) Cytochrome c1, heme protein, mitochondrial precursor|
          Length = 309

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 29/56 (51%), Positives = 40/56 (71%)
 Frame = +2

Query: 278 TIASADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYR 445
           T  +   AEHGL A  Y W H G   ++DHASIRRG+QVY++VCA+CHS+  +++R
Sbjct: 58  TAEAMTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVCAACHSLDRVAWR 113

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>CY1_NEUCR (P07142) Cytochrome c1, heme protein, mitochondrial precursor|
          Length = 332

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 29/58 (50%), Positives = 41/58 (70%)
 Frame = +2

Query: 272 FGTIASADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYR 445
           +G  ++   AE GL A +YPW H   L ++DH ++RRG QVY++VCASCHS+S + YR
Sbjct: 65  YGFASAMTPAEEGLHATKYPWVHEQWLKTFDHQALRRGFQVYREVCASCHSLSRVPYR 122

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>CY1_MOUSE (Q9D0M3) Cytochrome c1, heme protein, mitochondrial precursor|
           (Cytochrome c-1)
          Length = 325

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = +2

Query: 287 SADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYR 445
           SA + E  L    YPW H G+LSS DH SIRRG QVY+QVC+SCHSM  ++YR
Sbjct: 83  SASDLE--LHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYR 133

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>CY1_BOVIN (P00125) Cytochrome c1, heme protein, mitochondrial (Cytochrome|
           c-1)
          Length = 241

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +2

Query: 326 YPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYR 445
           YPW H G+LSS DH SIRRG QVY+QVC+SCHSM  ++YR
Sbjct: 10  YPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYR 49

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>CY1_KLULA (Q00988) Cytochrome c1, heme protein, mitochondrial precursor|
          Length = 292

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 28/49 (57%), Positives = 39/49 (79%)
 Frame = +2

Query: 299 AEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYR 445
           AEHGL A  Y W H G L ++DH+SIRRG+QVY++VCA+CHS+  +++R
Sbjct: 50  AEHGLHAPGYGWSHNGPLETFDHSSIRRGYQVYREVCAACHSLDRVAWR 98

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>CY1_EUGGR (P20114) Cytochrome c1, heme protein|
          Length = 243

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 21/39 (53%), Positives = 25/39 (64%)
 Frame = +2

Query: 329 PWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYR 445
           PWPH       D  S+RRG +VY+QV A CHS+S I YR
Sbjct: 10  PWPHFQWFQGLDWRSVRRGKEVYEQVFAPCHSLSFIKYR 48

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>CY1_RHORU (P23135) Cytochrome c1 precursor|
          Length = 272

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 19/54 (35%), Positives = 32/54 (59%)
 Frame = +2

Query: 287 SADEAEHGLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD 448
           +A   E G++  +  W   GI   YD   ++RG QV+ +VC++CH M  ++YR+
Sbjct: 21  AAQANEGGVSLHKQDWSWKGIFGRYDQPQLQRGFQVFHEVCSTCHGMKRVAYRN 74

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>CYBC_BRAJA (P51131) Cytochrome b/c1 [Contains: Cytochrome b; Cytochrome c1]|
          Length = 687

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 17/39 (43%), Positives = 28/39 (71%)
 Frame = +2

Query: 332 WPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD 448
           W  AG    +D  +++RG +VY++VCASCH +S I++R+
Sbjct: 446 WSFAGPFGKFDRGALQRGLKVYKEVCASCHGLSYIAFRN 484

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>CY1_RHOVI (P81379) Cytochrome c1 precursor|
          Length = 282

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 13/60 (21%)
 Frame = +2

Query: 308 GLAAAEYP-------------WPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRD 448
           GLAAA  P             W  AG    YD A +RRG QV+Q VC SCH++    +R+
Sbjct: 16  GLAAASVPAQASGGDTPHLQSWSFAGPFGQYDKAQLRRGFQVFQNVCVSCHTLENGGFRN 75

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>CY1_RHOCA (P08501) Cytochrome c1 precursor|
          Length = 279

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +2

Query: 323 EYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYR 445
           ++ +   GI   YD A +RRG QVY +VC++CH M  +  R
Sbjct: 27  DHAFSFEGIFGKYDQAQLRRGFQVYNEVCSACHGMKFVPIR 67

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>CY1_RHOSH (Q02760) Cytochrome c1 precursor|
          Length = 285

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 323 EYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYR 445
           + P+   G   ++D   ++RG QVY +VCA+CH M  +  R
Sbjct: 30  DVPFSFEGPFGTFDQHQLQRGLQVYTEVCAACHGMKFVPIR 70

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>CY1_PARDE (P13627) Cytochrome c1 precursor|
          Length = 450

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +2

Query: 284 ASADEAEHGLAAA---EYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYR 445
           A+A EA    AAA   +  +   G    +D   ++RG QVY +VC++CH +  +  R
Sbjct: 201 AAAQEAGDSHAAAHIEDISFSFEGPFGKFDQHQLQRGLQVYTEVCSACHGLRYVPLR 257

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>QCRC_MYCTU (P63887) Ubiquinol-cytochrome c reductase cytochrome c subunit|
          Length = 280

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 308 GLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSL 433
           GLAA   P P   +      A +R G Q++   C SCH  +L
Sbjct: 40  GLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANL 81

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>QCRC_MYCBO (P63888) Ubiquinol-cytochrome c reductase cytochrome c subunit|
          Length = 280

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 308 GLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSL 433
           GLAA   P P   +      A +R G Q++   C SCH  +L
Sbjct: 40  GLAAVLTPTPQVAVADESSSALLRTGKQLFDTSCVSCHGANL 81

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>QCRC_MYCLE (O69583) Ubiquinol-cytochrome c reductase cytochrome c subunit|
          Length = 289

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 308 GLAAAEYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSL 433
           GLAA   P P   +      A +R G Q++   C SCH  +L
Sbjct: 49  GLAAVLTPTPQVAVADEDSSALLRTGKQLFDTSCVSCHGANL 90

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>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +2

Query: 5   GAPPSTSLPPAP-HLPRRRSSE--PRLAVPSPLPIEP 106
           G P STS PP P  +P  R  E  P L+ P+P PI P
Sbjct: 222 GTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPP 258

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>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)|
           (Transcription factor GATA-B) (dGATA-B) (Protein
           serpent)
          Length = 1264

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = -3

Query: 386 VHGGLMRDRKS*GCQHAARGTLQLPNHARLHLQMLSYQNIKDQKHQLREEPMLSVQQRTL 207
           V+ G +  + + G Q+     +Q PN  + HLQ   +Q  + Q+HQ  ++  L  QQ+  
Sbjct: 502 VYAGSLLTQTANGIQYG----MQSPNQTQAHLQQQHHQQ-QQQQHQQHQQQQLQQQQQQH 556

Query: 206 H 204
           H
Sbjct: 557 H 557

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>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein|
          Length = 1509

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 7/36 (19%)
 Frame = +2

Query: 11  PPSTSLPPAPHLPR-------RRSSEPRLAVPSPLP 97
           PP   LPPAPHLP          SSE    +P+P P
Sbjct: 817 PPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTP 852

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>CY1_CHRVI (O31216) Cytochrome c1 precursor|
          Length = 244

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 362 DHASIRRGHQVYQQVCASCHSMSLISY 442
           D AS++RG + +   C  CHS+  + Y
Sbjct: 35  DQASLQRGAKYFMNYCTGCHSLQYMRY 61

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>ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 562

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +2

Query: 8   APPSTSLPPAPHLPRRRSSEPRLAVPSP 91
           AP  T  PPAPH P    S P   +PSP
Sbjct: 507 APIYTPPPPAPHCPPPAPSAPTPPIPSP 534

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>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,|
           arginine/serine-rich 2-interacting protein)
           (SC35-interacting protein 1) (CTD-associated SR protein
           11) (Splicing regulatory protein 129) (SRrp129)
           (NY-REN-40 antigen)
          Length = 1148

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 267 KRPEAPTPRRANALSPAEDSSCFPRNEESR 178
           KRP++P+PRR       +  S  P+NE +R
Sbjct: 497 KRPQSPSPRRETGKESRKSQSPSPKNESAR 526

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>BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 (BBC1 protein)|
          Length = 1157

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +2

Query: 8   APPSTS---LPPAPHLPRRRSSEPRLAVPSPLPIEP 106
           APP+ S   +PP P +P   S+ P L+ PS  P+ P
Sbjct: 718 APPALSAPSVPPVPPVPPVSSAPPALSAPSIPPVPP 753

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>Y966_TREPA (O83932) Hypothetical protein TP0966 precursor|
          Length = 544

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +2

Query: 8   APP----STSLPPAPHLPRRRSSEPRLAVPSPLPIEP*MAAGRA 127
           APP    S ++PPAP  PR    +P   VP+ LP+     A RA
Sbjct: 46  APPAHTASEAVPPAPE-PRAEGEQPSPLVPTALPVPGGAVAARA 88

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>MOAE_RHILO (Q984P0) Molybdopterin-converting factor subunit 2 (MPT synthase|
           subunit 2) (Molybdopterin synthase subunit 2)
           (Molybdenum cofactor biosynthesis protein E)
           (Molybdopterin-converting factor large subunit)
          Length = 159

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +2

Query: 296 EAEHGLAAAEYP--WPHAGILSSYDHASIRRGHQVYQQVCASCH 421
           EAE G  AAE    WP  G+   + H  IR G  +   V AS H
Sbjct: 62  EAEIGRIAAEAVERWPLQGLTVIHRHGKIRPGENIVLVVAASAH 105

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>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)|
           (Fragment)
          Length = 290

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 11  PPSTSLPPAPHLPRRRSSEPRLAVPSPLPI 100
           PP  + PPAP  P   SS PR+  P   P+
Sbjct: 199 PPVATSPPAPQEPVPVSSPPRVPTPPSTPV 228

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>ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 564

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +2

Query: 8   APPSTSLPPAPHLPRRRSSEPRLAVPSP 91
           AP  T  PPAPH P    S P   +PSP
Sbjct: 509 APIYTPPPPAPHCPPPPPSAPTPPIPSP 536

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>TDG_MOUSE (P56581) G/T mismatch-specific thymine DNA glycosylase (EC 3.2.2.-)|
           (C-JUN leucine zipper interactive protein JZA-3)
          Length = 397

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 32  PAPHLPRRRSSEPRLAVPSPLPIEP 106
           PAP  P+RR  +PR A P   P+EP
Sbjct: 40  PAPEAPKRRKRKPRAAEPQE-PVEP 63

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>FMDC_METBF (Q48943) Molybdenum-containing formylmethanofuran dehydrogenase 1|
           subunit C (EC 1.2.99.5) (Molybdenum-containing
           formylmethanofuran dehydrogenase I subunit C)
          Length = 301

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
 Frame = -1

Query: 133 VNGPAGSHSGLDWERTWHGEAG----LXXXXXREVGSGWEGG 20
           + G AG H G  +   WHG  G    +      ++G G +GG
Sbjct: 160 IKGNAGDHVGCAYRGKWHGMKGGRIVIEGSARHQLGGGMDGG 201

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>GUNA_MICBI (P26414) Endoglucanase A precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase)
          Length = 456

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +2

Query: 8   APPSTSLPPAPHLPRRRSSEPRLAVPSPLPIEP*MAAGRA 127
           APP+ S  P P  P    S+     PSP P +P   AGRA
Sbjct: 322 APPTYSPSPTPSTPSPSPSQSDPGSPSPSPSQP--PAGRA 359

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>Y1854_AQUAE (O67706) Hypothetical protein aq_1854 precursor|
          Length = 152

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 8/20 (40%), Positives = 17/20 (85%)
 Frame = +2

Query: 362 DHASIRRGHQVYQQVCASCH 421
           DH  +++G++VY++ C++CH
Sbjct: 18  DHNLLQKGYEVYKKHCSACH 37

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>PPGB_HUMAN (P10619) Lysosomal protective protein precursor (EC 3.4.16.5)|
           (Cathepsin A) (Carboxypeptidase C) (Protective protein
           for beta-galactosidase) [Contains: Lysosomal protective
           protein 32 kDa chain; Lysosomal protective protein 20
           kDa chain]
          Length = 480

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
 Frame = +1

Query: 322 RVPLAACWHP*LLRS----RINPPWTSSLPASVCILSLHV 429
           R+PL   WH  LLRS    R++PP T++  AS  + + +V
Sbjct: 307 RLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYV 346

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>GLU2_MAIZE (P04706) Glutelin-2 precursor (Zein-gamma) (27 kDa zein)|
           (Alcohol-soluble reduced glutelin) (ASG) (Zein ZC2)
          Length = 223

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 11  PPSTSLPPAPHLPRRRSSEPRLAVPSPLPIEP 106
           PP   LPP  HLP      P + VP P+ + P
Sbjct: 49  PPPVHLPPPVHLPPPVHLPPPVHVPPPVHLPP 80

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>DOC2B_MOUSE (P70169) Double C2-like domain-containing protein beta (Doc2-beta)|
          Length = 412

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 279 VPKHKRPEAPTPRRANALSPAEDSSCFPRNEESRDEPED 163
           +P    P AP P  A A SPA  +S    ++ +RD+ ED
Sbjct: 44  LPPTAAPRAPAPPDAPARSPAASASPRSPSDGARDDDED 82

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>BBR1_SCHCO (P78741) Pheromone B beta 1 receptor|
          Length = 541

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = +2

Query: 8   APPSTSLPPAPHLPRRRSSEPRLAVPSPLPIEP 106
           APPS  LPP  H+P      P  AVPS  P  P
Sbjct: 469 APPS--LPPPTHMPDEAHISPSHAVPSRPPAFP 499

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>DHET_GLUOX (O05542) Alcohol dehydrogenase [acceptor] precursor (EC 1.1.99.8)|
           (G3-ADH subunit I)
          Length = 757

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 356 SYDHASIRRGHQVYQQVCASCHSMSLIS 439
           +YD A  + G+ +YQ  C++CH  + IS
Sbjct: 636 TYDEARQKDGYFMYQTFCSACHGDNAIS 663

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>QCRB_MYCLE (P15878) Ubiquinol-cytochrome c reductase cytochrome b subunit|
          Length = 551

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 214 LCWTESIGSSRSWCFWSFMFWYDSI 288
           + WTE  G +R W  W F FW+ +I
Sbjct: 309 MMWTE--GLARIWPAWEFYFWHHTI 331

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>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein|
            kinase with no lysine 2) (Protein kinase,
            lysine-deficient 2)
          Length = 2297

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 11   PPSTSLPPAPHLPRRRSSEPRLAVP-SPLPIEP 106
            PP   LPP P LP +    P+ A+P  P P++P
Sbjct: 975  PPQPVLPPQPMLPPQPVLPPQPALPVRPEPLQP 1007

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +2

Query: 8   APPSTSLPPAPHLPRRRSSEPRLAVPSPLPIEP 106
           APP+   PP+P  P      P    PSP P  P
Sbjct: 298 APPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSP 330

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>GP156_MOUSE (Q6PCP7) Probable G-protein coupled receptor 156 (GABAB-related|
           G-protein coupled receptor)
          Length = 798

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 8   APPSTSLPPAPHLPRRRSSEPRLAVPSP 91
           +P +  LP +P LPR+R   PRL+   P
Sbjct: 692 SPAAPCLPSSPALPRQRQPRPRLSPGCP 719


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,432,706
Number of Sequences: 219361
Number of extensions: 1139251
Number of successful extensions: 4944
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 4346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4909
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result