ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast56e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial pre... 69 5e-12
2MPCP_RAT (P16036) Phosphate carrier protein, mitochondrial precu... 69 5e-12
3MPCP_BOVIN (P12234) Phosphate carrier protein, mitochondrial pre... 67 3e-11
4PIC2_YEAST (P40035) Mitochondrial phosphate carrier protein 2 (P... 65 7e-11
5MPCP_HUMAN (Q00325) Phosphate carrier protein, mitochondrial pre... 65 9e-11
6MPCP_CHOFU (O61703) Phosphate carrier protein, mitochondrial pre... 64 3e-10
7MPCP_CAEEL (P40614) Phosphate carrier protein, mitochondrial pre... 63 3e-10
8MPCP_YEAST (P23641) Mitochondrial phosphate carrier protein (Pho... 37 0.033
9GHC2_MOUSE (Q9DB41) Mitochondrial glutamate carrier 2 (GC-2) (Gl... 33 0.48
10AGC1_YEAST (Q12482) Mitochondrial aspartate-glutamate transporte... 32 1.1
11AGC1_ASHGO (Q75AH6) Mitochondrial aspartate-glutamate transporte... 31 1.8
12GHC2_HUMAN (Q9H1K4) Mitochondrial glutamate carrier 2 (GC-2) (Gl... 30 3.1
13GHC2_RAT (Q505J6) Mitochondrial glutamate carrier 2 (GC-2) (Glut... 30 4.1
14RISB_SALTY (P66038) 6,7-dimethyl-8-ribityllumazine synthase (EC ... 30 4.1
15RISB_SALTI (P66039) 6,7-dimethyl-8-ribityllumazine synthase (EC ... 30 4.1

>MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 357

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 30/52 (57%), Positives = 37/52 (71%)
 Frame = +3

Query: 297 SPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKIQSITSGFGVLLR 452
           S  +YA C  GG+ SCGLTH AV PLDLVKC MQ+DP K + I +GF + L+
Sbjct: 56  SMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLK 107



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>MPCP_RAT (P16036) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 356

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 30/52 (57%), Positives = 37/52 (71%)
 Frame = +3

Query: 297 SPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKIQSITSGFGVLLR 452
           S  +YA C  GG+ SCGLTH AV PLDLVKC MQ+DP K + I +GF + L+
Sbjct: 55  SMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLK 106



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>MPCP_BOVIN (P12234) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 362

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = +3

Query: 297 SPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKIQSITSGFGVLLR 452
           S  F+  C  GGI SCG TH A+ PLDLVKC MQ+DP K +SI +GF V L+
Sbjct: 61  SGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKSIFNGFSVTLK 112



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>PIC2_YEAST (P40035) Mitochondrial phosphate carrier protein 2 (Phosphate|
           transport protein 2) (PTP 2) (mPic 2) (Pi carrier
           isoform 2)
          Length = 300

 Score = 65.5 bits (158), Expect = 7e-11
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +3

Query: 282 KIVMYSPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKIQSITSGF 437
           KI +Y+  FYA CT GGI +CG TH ++TPLDLVKC +Q++P    S   GF
Sbjct: 9   KIQLYTKEFYATCTLGGIIACGPTHSSITPLDLVKCRLQVNPKLYTSNLQGF 60



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>MPCP_HUMAN (Q00325) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 362

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 29/52 (55%), Positives = 35/52 (67%)
 Frame = +3

Query: 297 SPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKIQSITSGFGVLLR 452
           S  F+  C  GGI SCG TH A+ PLDLVKC MQ+DP K + I +GF V L+
Sbjct: 61  SGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKGIFNGFSVTLK 112



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>MPCP_CHOFU (O61703) Phosphate carrier protein, mitochondrial precursor|
           (Phosphate transport protein) (PTP)
          Length = 349

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +3

Query: 297 SPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKIQSITSGFGVLLR 452
           S  ++A C  GGI SCG+TH AV PLDLVKC +Q+D  K +++ +GF V +R
Sbjct: 45  STKYFALCGLGGILSCGITHTAVVPLDLVKCRLQVDADKYKNVVNGFRVSVR 96



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>MPCP_CAEEL (P40614) Phosphate carrier protein, mitochondrial precursor (PTP)|
          Length = 340

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 27/59 (45%), Positives = 39/59 (66%)
 Frame = +3

Query: 261 SIRAPNEKIVMYSPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKIQSITSGF 437
           ++ AP + +   S  +YA C  GG+ SCG+TH A+ PLDLVKC +Q++P K   I +GF
Sbjct: 28  AVSAPGQ-VEFGSGKYYAYCALGGVLSCGITHTAIVPLDLVKCRIQVNPEKYTGIATGF 85



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>MPCP_YEAST (P23641) Mitochondrial phosphate carrier protein (Phosphate|
           transport protein) (PTP) (mPic 1) (Mitochondrial import
           receptor) (p32)
          Length = 311

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 285 IVMYSPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDP 407
           I  YS + Y      G   CG TH ++ P+D+VK  +Q++P
Sbjct: 9   IPQYSVSDYMKFALAGAIGCGSTHSSMVPIDVVKTRIQLEP 49



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>GHC2_MOUSE (Q9DB41) Mitochondrial glutamate carrier 2 (GC-2) (Glutamate/H(+)|
           symporter 2) (Solute carrier family 25 member 18)
           (Fragment)
          Length = 312

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = +3

Query: 294 YSPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKIQSITSGFG 440
           ++ +F A CTAG +A+     +AVTPLD++K        +IQ++  G G
Sbjct: 218 FTHSFVAGCTAGSVAA-----VAVTPLDVLK-------TRIQTLKKGLG 254



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>AGC1_YEAST (Q12482) Mitochondrial aspartate-glutamate transporter AGC1|
           (Aspartate-glutamate carrier 1)
          Length = 902

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +3

Query: 273 PNEKIVMYSPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKIQSITSGFGVLLR 452
           PN+K        +   TAG IA      +  TP D++K  +QIDP K ++  +G    +R
Sbjct: 716 PNDKTKRNRLKTWELLTAGAIAGMPAAFLT-TPFDVIKTRLQIDPRKGETKYNGIFHAIR 774

Query: 453 S 455
           +
Sbjct: 775 T 775



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>AGC1_ASHGO (Q75AH6) Mitochondrial aspartate-glutamate transporter AGC1|
           (Aspartate-glutamate carrier 1)
          Length = 911

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 324 AGGIASCGLTHMAVTPLDLVKCNMQIDPAKIQSITSG 434
           +GG+A      +  TP D++K  +QIDP K +S+ +G
Sbjct: 725 SGGLAGMPAAFLT-TPFDVIKTRLQIDPKKGESVYNG 760



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>GHC2_HUMAN (Q9H1K4) Mitochondrial glutamate carrier 2 (GC-2) (Glutamate/H(+)|
           symporter 2) (Solute carrier family 25 member 18)
          Length = 315

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +3

Query: 294 YSPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKIQSITSGFG 440
           ++ +F + C AG IA+     +AVTPLD++K        +IQ++  G G
Sbjct: 221 FAHSFVSGCVAGSIAA-----VAVTPLDVLK-------TRIQTLKKGLG 257



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>GHC2_RAT (Q505J6) Mitochondrial glutamate carrier 2 (GC-2) (Glutamate/H(+)|
           symporter 2) (Solute carrier family 25 member 18)
          Length = 315

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 294 YSPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKIQSITSGFG 440
           ++ +F A C AG +++     +AVTPLD++K        +IQ++  G G
Sbjct: 221 FTHSFVAGCAAGSVSA-----VAVTPLDVLK-------TRIQTLKKGLG 257



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>RISB_SALTY (P66038) 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL|
           synthase) (Lumazine synthase) (Riboflavin synthase beta
           chain)
          Length = 156

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 379 RSSGVTAMWVRPQLAIPPAVQAA*KAGEYMTIFSLGARIEKG 254
           +   +T +WV     +P A +A  K+G+Y  + +LG  I  G
Sbjct: 45  KDDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGG 86



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>RISB_SALTI (P66039) 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL|
           synthase) (Lumazine synthase) (Riboflavin synthase beta
           chain)
          Length = 156

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 379 RSSGVTAMWVRPQLAIPPAVQAA*KAGEYMTIFSLGARIEKG 254
           +   +T +WV     +P A +A  K+G+Y  + +LG  I  G
Sbjct: 45  KDDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGG 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,269,440
Number of Sequences: 219361
Number of extensions: 420280
Number of successful extensions: 1136
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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