ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast56e07 |
|---|---|
| Clone Library Name | barley_pub |
>RS19_ORYSA (P40978) 40S ribosomal protein S19| Length = 146 Score = 223 bits (567), Expect = 2e-58 Identities = 104/112 (92%), Positives = 109/112 (97%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPP D DWYY RAAS+ARKIYL Sbjct: 10 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYL 69 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPR 423 RQGIG+GGFQKIYGGRQRNGSRPPHFCKSSGA+SRNILQ+LQKMGIIDVDP+ Sbjct: 70 RQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPK 121
>RS193_ARATH (Q9FNP8) 40S ribosomal protein S19-3| Length = 143 Score = 182 bits (463), Expect = 2e-46 Identities = 82/112 (73%), Positives = 98/112 (87%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDV+PHEFVKAY+AHLKRSGK+ELP W DIVKT + KEL P D DWYYIRAASMARK+YL Sbjct: 8 KDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYL 67 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPR 423 R G+G+G F++IYGG +RNGSRPPHFCKSSG V+R+ILQ+LQ M I+D+D + Sbjct: 68 RGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTK 119
>RS192_ARATH (Q9LF30) 40S ribosomal protein S19-2| Length = 143 Score = 179 bits (453), Expect = 3e-45 Identities = 79/112 (70%), Positives = 98/112 (87%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDV+PH+FVKAY++HLKRSGK+ELP W DIVKT R KEL P D DWYYIRAASMARKIYL Sbjct: 8 KDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYL 67 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPR 423 R G+G+G F++IYGG +RNGSRPPHFCKSSG ++R+ILQ+L+ M I+++D + Sbjct: 68 RGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTK 119
>RS191_ARATH (Q9SGA6) 40S ribosomal protein S19-1| Length = 143 Score = 178 bits (451), Expect = 6e-45 Identities = 77/112 (68%), Positives = 98/112 (87%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDV+PH+FVKAY++HLKRSGK+ELP W DIVKT + KEL P D DWYYIRAASMARK+YL Sbjct: 8 KDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYL 67 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPR 423 R G+G+G F++IYGG +RNGSRPPHFCKSSG ++R+ILQ+L+ M I+++D + Sbjct: 68 RGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTK 119
>RS19_MYAAR (Q94613) 40S ribosomal protein S19| Length = 149 Score = 147 bits (372), Expect = 9e-36 Identities = 63/111 (56%), Positives = 87/111 (78%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDV+ HEF +A++A LK+SGKM++PEW D VKT FKEL P + DWY+IRAAS+ R +Y+ Sbjct: 6 KDVSSHEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYI 65 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDP 420 R GIG F+KIYGGR+R G+ P HFCK++G++SR +LQ L+ + I++ DP Sbjct: 66 RSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDP 116
>RS19_MYXGL (Q9Y0H3) 40S ribosomal protein S19| Length = 145 Score = 138 bits (348), Expect = 5e-33 Identities = 61/111 (54%), Positives = 82/111 (73%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDVN EFVKA +A K+SGK++ P+WVD VK + KEL P D DWYYIR AS+AR +Y+ Sbjct: 7 KDVNQQEFVKALAAFFKKSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLYM 66 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDP 420 R G+G+G KIYGGRQRNG+RP H+ + S V+R +LQ L+ + +++ DP Sbjct: 67 RGGVGVGAMTKIYGGRQRNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDP 117
>RS19_RAT (P17074) 40S ribosomal protein S19| Length = 144 Score = 135 bits (339), Expect = 6e-32 Identities = 62/110 (56%), Positives = 82/110 (74%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDVN EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +YL Sbjct: 6 KDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYL 65 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVD 417 R G G+G KIYGGRQRNG RP HF + S +V+R +LQ L+ + +++ D Sbjct: 66 RGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKD 115
>RS19_MOUSE (Q9CZX8) 40S ribosomal protein S19| Length = 144 Score = 135 bits (339), Expect = 6e-32 Identities = 62/110 (56%), Positives = 82/110 (74%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDVN EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +YL Sbjct: 6 KDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYL 65 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVD 417 R G G+G KIYGGRQRNG RP HF + S +V+R +LQ L+ + +++ D Sbjct: 66 RGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKD 115
>RS19_BRABE (Q8T5Z4) 40S ribosomal protein S19| Length = 147 Score = 134 bits (338), Expect = 8e-32 Identities = 62/110 (56%), Positives = 83/110 (75%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDVN EFVKA++A LK+SGK++LPEWVD+VKTA KEL P D DW+Y+RAAS AR +Y+ Sbjct: 8 KDVNQQEFVKAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYM 67 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVD 417 R G+G+G KIYGGR+R G++P F S VSR +LQ L+ + +++ D Sbjct: 68 RGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKD 117
>RS19_GILMI (Q9DFR5) 40S ribosomal protein S19| Length = 147 Score = 133 bits (335), Expect = 2e-31 Identities = 61/111 (54%), Positives = 82/111 (73%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDVN EFV+A +A LK+SGK+++P+WVD+VK R KEL P+D +W+YIRAAS R +YL Sbjct: 7 KDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHLYL 66 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDP 420 R G G+G KIYGGRQRNG P H+ + S V+R +LQ L+ + +I+ DP Sbjct: 67 RGGAGVGSMTKIYGGRQRNGVCPAHYSEGSKNVARKVLQALELLKMIEKDP 117
>RS19_PONPY (Q5R8M9) 40S ribosomal protein S19| Length = 144 Score = 132 bits (333), Expect = 3e-31 Identities = 61/110 (55%), Positives = 81/110 (73%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDVN EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +YL Sbjct: 6 KDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYL 65 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVD 417 R G G+G KIYGGRQRNG P HF + S +V+R +LQ L+ + +++ D Sbjct: 66 RGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKD 115
>RS19_HUMAN (P39019) 40S ribosomal protein S19| Length = 144 Score = 132 bits (333), Expect = 3e-31 Identities = 61/110 (55%), Positives = 81/110 (73%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDVN EFV+A +A LK+SGK+++PEWVD VK A+ KEL P D +W+Y RAAS AR +YL Sbjct: 6 KDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYL 65 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVD 417 R G G+G KIYGGRQRNG P HF + S +V+R +LQ L+ + +++ D Sbjct: 66 RGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKD 115
>RS19_ICTPU (Q90YQ4) 40S ribosomal protein S19| Length = 147 Score = 132 bits (333), Expect = 3e-31 Identities = 61/111 (54%), Positives = 82/111 (73%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDVN EFV+A +A LK+SGK+++P+WVDIVK A+ KEL P D +W+YIRAAS R +YL Sbjct: 9 KDVNQQEFVRALAAFLKKSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHLYL 68 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDP 420 R G+G+G KIYGGR+RNG P HF S V+R +LQ L+ + +++ DP Sbjct: 69 RGGVGVGSMIKIYGGRKRNGVCPSHFSVGSKNVARKVLQALEALKMVEKDP 119
>RS19_EMENI (P27073) 40S ribosomal protein S19 (S16)| Length = 148 Score = 132 bits (332), Expect = 4e-31 Identities = 57/110 (51%), Positives = 82/110 (74%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 +DV+ +F+ AY+A LKR GK+ +P WVD VKT+ ELPP DADWYY+RAA++AR IYL Sbjct: 7 RDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIYL 66 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVD 417 R+ +G+G +K++G + GSRP H +SGAV R +LQ L+K+G+++ D Sbjct: 67 RKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQD 116
>RS19_PIG (Q29308) 40S ribosomal protein S19 (Fragment)| Length = 135 Score = 131 bits (330), Expect = 6e-31 Identities = 61/110 (55%), Positives = 80/110 (72%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDVN EFV+A +A LK+SGK+++PEWVD VK A KEL P D +W+Y RAAS AR +YL Sbjct: 6 KDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHLYL 65 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVD 417 R G G+G KIYGGRQRNG P HF + S +V+R +LQ L+ + +++ D Sbjct: 66 RGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKD 115
>RS19_AEQIR (Q8ITC3) 40S ribosomal protein S19| Length = 144 Score = 131 bits (329), Expect = 8e-31 Identities = 56/110 (50%), Positives = 80/110 (72%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDV+ H F KA +A LK+SGKM++PEW I+K ++F EL P D DW+Y RAAS+ R +Y+ Sbjct: 6 KDVDSHTFTKALAAFLKKSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHLYI 65 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVD 417 R G+G KIYG R+RNG+ P H+C+SSG+V+R +LQ L+ +++ D Sbjct: 66 RSPAGVGALTKIYGDRKRNGTVPSHYCRSSGSVARRVLQALETQKLVEKD 115
>RS19B_SCHPO (P79016) 40S ribosomal protein S19-B (S16-B)| Length = 143 Score = 130 bits (327), Expect = 1e-30 Identities = 57/108 (52%), Positives = 78/108 (72%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDV+ +F+ AY+A LKRSGKM P+W+DIVKT KEL P D DWYY+RAA++AR IYL Sbjct: 7 KDVDAQQFINAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYL 66 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIID 411 R+ +G+G K+YGG G RP H SG+V R ++Q L+K+G+++ Sbjct: 67 RKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLE 114
>RS19A_SCHPO (P58234) 40S ribosomal protein S19-A (S16-A)| Length = 144 Score = 129 bits (325), Expect = 2e-30 Identities = 57/108 (52%), Positives = 78/108 (72%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDV+ +F+ AY+A LKRSGKM P+W+DIVKT KEL P D DWYY+RAA++AR IYL Sbjct: 7 KDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYL 66 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIID 411 R+ +G+G K+YGG G RP H SG+V R ++Q L+K+G+++ Sbjct: 67 RKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLE 114
>RS19_PAGMA (P61155) 40S ribosomal protein S19| Length = 146 Score = 127 bits (320), Expect = 9e-30 Identities = 58/111 (52%), Positives = 80/111 (72%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDVN EFV+A +A LK+SGK+++P+WVD+VK + KEL P+D +W+YIR+AS R +YL Sbjct: 7 KDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLYL 66 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDP 420 R G G+G KIYG RQRNG P H+ S V+R +LQ L+ + +I+ DP Sbjct: 67 RGGAGVGSMTKIYGSRQRNGVCPAHYSVGSKNVARKVLQALELLKMIEKDP 117
>RS19_ENTHI (O15631) 40S ribosomal protein S19| Length = 148 Score = 121 bits (303), Expect = 9e-28 Identities = 57/107 (53%), Positives = 75/107 (70%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDV +F+KAY+ HLK+SGK+E+PEWVD VKT KEL P + DW YIRAA++ARK+YL Sbjct: 8 KDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYL 67 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGII 408 GIG+ ++ YG + P H SG V+R ILQ+L+KMGI+ Sbjct: 68 NNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIV 114
>RS19A_DROME (P39018) 40S ribosomal protein S19a| Length = 155 Score = 119 bits (298), Expect = 3e-27 Identities = 51/111 (45%), Positives = 76/111 (68%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KD++ H KA + LK++GK+++P+ +DIVKTA+FKEL P D DW+Y+R AS+ R +Y Sbjct: 6 KDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYH 65 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDP 420 R G+G KIYGGR+RNG P HFC+++ +R LQ L+ +++ P Sbjct: 66 RSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHP 116
>RS19S_ASCSU (P39698) 40S ribosomal protein S19S| Length = 150 Score = 119 bits (297), Expect = 4e-27 Identities = 51/111 (45%), Positives = 77/111 (69%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDV+ HE V+ + LK+SGK+++PEW D+VK KEL P D+DWYY+R AS+AR++Y+ Sbjct: 8 KDVDQHEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYI 67 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDP 420 R G+G +++YGG +R G P HF ++SG+V R LQ L+ + ++ P Sbjct: 68 RSPTGVGALRRVYGGNKRRGVTPNHFARASGSVIRKALQTLEAIKWVEKHP 118
>RS19B_YEAST (P07281) 40S ribosomal protein S19-B (S16B) (YS16) (RP55)| Length = 143 Score = 118 bits (295), Expect = 7e-27 Identities = 52/113 (46%), Positives = 83/113 (73%), Gaps = 1/113 (0%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDAD-WYYIRAASMARKIY 264 +DV +F+ AY++ L+R GK+E+P +VDIVKT+ E+PP DA+ W+Y RAAS+AR IY Sbjct: 6 RDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIY 65 Query: 265 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPR 423 +R+ +G+G K+YGG + G RP +SG+++R +LQ L+K+GI+++ P+ Sbjct: 66 MRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPK 118
>RS19A_YEAST (P07280) 40S ribosomal protein S19-A (S16A) (YS16) (RP55) (YP45)| Length = 143 Score = 118 bits (295), Expect = 7e-27 Identities = 52/113 (46%), Positives = 83/113 (73%), Gaps = 1/113 (0%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDAD-WYYIRAASMARKIY 264 +DV +F+ AY++ L+R GK+E+P +VDIVKT+ E+PP DA+ W+Y RAAS+AR IY Sbjct: 6 RDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIY 65 Query: 265 LRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPR 423 +R+ +G+G K+YGG + G RP +SG+++R +LQ L+K+GI+++ P+ Sbjct: 66 MRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPK 118
>RS19_CAEEL (O18650) 40S ribosomal protein S19| Length = 146 Score = 110 bits (276), Expect = 1e-24 Identities = 53/111 (47%), Positives = 74/111 (66%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDV+ HE K+ + LK+SGK+++PEW D+VK KEL P D DW+Y RAAS+AR +Y Sbjct: 8 KDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYF 67 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDP 420 R GIG F+K+YGG +R G P HF S+G R +Q+L+K+ ++ P Sbjct: 68 RPA-GIGAFKKVYGGNKRRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHP 117
>RS19G_ASCSU (P24494) 40S ribosomal protein S19G (Eliminated protein NO. 1)| Length = 148 Score = 109 bits (272), Expect = 3e-24 Identities = 49/111 (44%), Positives = 73/111 (65%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 KDV+ HE V+ + LK+SGK+++PEW D+ K KEL P ++DWYY+R AS+AR++Y+ Sbjct: 8 KDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLYV 67 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDP 420 R G+ + +YGG +R G P HF K+SG+V R LQ L+ + + P Sbjct: 68 RSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHP 118
>RS19B_DROME (Q7KS38) 40S ribosomal protein S19b| Length = 154 Score = 106 bits (265), Expect = 2e-23 Identities = 49/111 (44%), Positives = 69/111 (62%) Frame = +1 Query: 88 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYL 267 K+++ H K +A LK+SGK+ +PE +KT +FKE PTD DW+Y R AS+ R +YL Sbjct: 6 KEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYL 65 Query: 268 RQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDP 420 R G+G F K+Y GR+RNG RP C+SS R LQ L+ +++ P Sbjct: 66 RSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHP 116
>RS19E_AERPE (Q9YD22) 30S ribosomal protein S19e| Length = 153 Score = 93.6 bits (231), Expect = 2e-19 Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 1/84 (1%) Frame = +1 Query: 160 PEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR-QGIGIGGFQKIYGGRQRNGSRP 336 P W KT KE PPTD DW+Y+RAAS+ RK+Y + IGI F+ IYGGRQ GS P Sbjct: 30 PAWAYFAKTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAP 89 Query: 337 PHFCKSSGAVSRNILQELQKMGII 408 HF K+ G+V R ILQ+L++ G++ Sbjct: 90 EHFRKAGGSVPRKILQQLEEAGLV 113
>RS19E_METJA (P54057) 30S ribosomal protein S19e| Length = 148 Score = 93.6 bits (231), Expect = 2e-19 Identities = 45/110 (40%), Positives = 65/110 (59%) Frame = +1 Query: 91 DVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR 270 DV + ++ + LK + +PEWVD VKT +E P DW+YIR AS+ RKIY+ Sbjct: 6 DVPADKLIQKTAEKLKEMN-IGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKIYIY 64 Query: 271 QGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDP 420 +G+ + YGGR+ G P HF K SG + R LQEL+K+G+++ P Sbjct: 65 GPVGVSRLRTAYGGRKNRGHEPEHFYKGSGNIIRKALQELEKLGLVEKTP 114
>RS19E_METTH (O27653) 30S ribosomal protein S19e| Length = 145 Score = 92.0 bits (227), Expect = 6e-19 Identities = 41/106 (38%), Positives = 65/106 (61%) Frame = +1 Query: 91 DVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR 270 DV + + LK K++ PEWV+ VKT KE P + DW+Y+RAA++ R++Y+ Sbjct: 6 DVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYID 65 Query: 271 QGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGII 408 +G+ + YGG++ GSRP F + SGA+ R LQ+L++ G+I Sbjct: 66 GPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLI 111
>RS19E_ARCFU (O28210) 30S ribosomal protein S19e| Length = 147 Score = 87.4 bits (215), Expect = 1e-17 Identities = 38/83 (45%), Positives = 54/83 (65%) Frame = +1 Query: 160 PEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPP 339 PEW VKT KE P DW+Y+R AS+ R++Y+ +GI + YGGR+R GS+PP Sbjct: 27 PEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPP 86 Query: 340 HFCKSSGAVSRNILQELQKMGII 408 F K SGA+ RN L +L+++G + Sbjct: 87 KFRKGSGAIVRNALHQLEQLGFV 109
>RS19E_PYRHO (O59041) 30S ribosomal protein S19e| Length = 150 Score = 83.6 bits (205), Expect = 2e-16 Identities = 41/110 (37%), Positives = 60/110 (54%) Frame = +1 Query: 91 DVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR 270 DV V+ + LK +++ PEW VKT R KE P DW+Y R AS+ R++Y+ Sbjct: 6 DVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYID 65 Query: 271 QGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDP 420 +GI + YGGR+ G P F K+ G++ R LQ+L+ G I+ P Sbjct: 66 GPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVP 115
>RS19E_THEVO (Q97CU4) 30S ribosomal protein S19e| Length = 150 Score = 79.7 bits (195), Expect = 3e-15 Identities = 38/95 (40%), Positives = 53/95 (55%) Frame = +1 Query: 124 SAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKI 303 S LK K++ P WV VKT KE PP DW Y+RAASM RK+Y+ +GI Sbjct: 17 SGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSE 76 Query: 304 YGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGII 408 YGG+ GS+ H S +++R + EL+ G++ Sbjct: 77 YGGKVDRGSKRYHAASGSRSITRFLFHELESAGLV 111
>RS19E_THEAC (Q9HM21) 30S ribosomal protein S19e| Length = 150 Score = 74.7 bits (182), Expect = 9e-14 Identities = 36/100 (36%), Positives = 54/100 (54%) Frame = +1 Query: 124 SAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKI 303 S LK K+ P+W VKT +E P + DW Y+RAA+M RK+Y+ +GI Sbjct: 17 SEKLKSEKKIAEPDWSKYVKTGISREKSPVNRDWIYVRAAAMLRKLYINGYLGISRMSSE 76 Query: 304 YGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPR 423 YGG+ GS+ H + S ++ R + EL+K G + P+ Sbjct: 77 YGGKVDRGSKRYHAAQGSRSIIRYLFHELEKAGYVQKTPK 116
>RS19E_HALMA (P19952) 30S ribosomal protein S19e (HS12) (E1.3)| Length = 152 Score = 68.6 bits (166), Expect = 7e-12 Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 4/111 (3%) Frame = +1 Query: 91 DVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWYYIRAASMARKIYLR 270 DV P E ++A + L +E P+W + KT +ELPP D++ RAAS+ RK+ + Sbjct: 5 DVPPEELIEALTETLADEDDIEAPDWAEFTKTGVDRELPPEQEDFWTRRAASLLRKVAVD 64 Query: 271 QGIGIGGFQKIYG----GRQRNGSRPPHFCKSSGAVSRNILQELQKMGIID 411 +G+ + YG G R RP K SG + R LQ+L+ G ++ Sbjct: 65 GPVGVNALRSEYGTSKQGTTRYRVRPHQKTKGSGNIIRTALQQLEDAGYVE 115
>LCE1A_HUMAN (Q5T7P2) Late cornified envelope protein 1A (Late envelope protein| 1) Length = 110 Score = 31.6 bits (70), Expect = 0.89 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = -3 Query: 394 SATPEGCCGKQHHCSCRSVGGVNRSSDGHHRSSGIHQSQFPASGRSSLPS 245 S + GCCG C S GG S HHR H+ + +SG S PS Sbjct: 45 SVSSGGCCGSSSGGGCSSGGGGCCLS--HHRRHRSHRHRLQSSGCCSQPS 92
>STP2_CANFA (O77645) Nuclear transition protein 2 (TP-2) (TP2)| Length = 129 Score = 30.8 bits (68), Expect = 1.5 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 9/61 (14%) Frame = -3 Query: 397 SSATPEG--C--CGKQHHC-----SCRSVGGVNRSSDGHHRSSGIHQSQFPASGRSSLPS 245 S++ P+G C C HC SC ++S GHH SSG HQSQ P +LP Sbjct: 17 SNSRPQGHTCSQCTCSSHCQTCSQSCSQSRSSSQSPTGHHSSSG-HQSQSP---HPTLPP 72 Query: 244 R 242 R Sbjct: 73 R 73
>LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late envelope protein| 3) Length = 118 Score = 30.4 bits (67), Expect = 2.0 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Frame = -3 Query: 394 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 245 S + GCCG SC S G SS G HHR H + +SG S PS Sbjct: 45 SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPS 100
>LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late envelope protein| 2) (Small proline-rich-like epidermal differentiation complex protein 2A) Length = 118 Score = 30.4 bits (67), Expect = 2.0 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Frame = -3 Query: 394 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 245 S + GCCG SC S G SS G HHR H + +SG S PS Sbjct: 45 SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPS 100
>LCE1F_HUMAN (Q5T754) Late cornified envelope protein 1F (Late envelope protein| 6) Length = 118 Score = 30.0 bits (66), Expect = 2.6 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Frame = -3 Query: 394 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPSRQP* 233 S + GCCG C S GG SS G HHR H+ + +S S PS Sbjct: 45 SVSSGGCCGSSSGGCCSSGGGGCCSSGGGGCCLSHHRRRRSHRHRPQSSDCCSQPSAGSS 104 Query: 232 C 230 C Sbjct: 105 C 105
>RPOC_SYMTH (Q67JT4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1179 Score = 29.6 bits (65), Expect = 3.4 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +1 Query: 97 NPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPTDADWY 228 +PHE + AY ++G +EL +WV+I K+L P +W+ Sbjct: 517 HPHEALLAY-----QNGLVELHDWVEIRFPEPPKDLEPYSEEWW 555
>GAL1_PYRKO (Q5JEK8) Galactokinase (EC 2.7.1.6) (Galactose kinase)| Length = 350 Score = 29.3 bits (64), Expect = 4.4 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 6/34 (17%) Frame = +1 Query: 100 PHEFVKAYSAHLKRSGKMELPE------WVDIVK 183 PHE V+ YS H K+S EL + W D VK Sbjct: 38 PHERVELYSEHFKKSVSFELEKLEKGNNWADYVK 71
>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Clox) (Clox-1) (Fragment) Length = 975 Score = 29.3 bits (64), Expect = 4.4 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = -3 Query: 370 GKQHHCSCRSVGGVNRSSDGHHRSSGIHQSQFPASGR--SSLPS 245 G + + S + GG R+ DG HRSS + + PA+ R SSL S Sbjct: 885 GGRRYLSRPARGGPCRARDGAHRSSALPSTSAPAAARRPSSLQS 928
>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 932 Score = 29.3 bits (64), Expect = 4.4 Identities = 20/42 (47%), Positives = 22/42 (52%) Frame = -3 Query: 325 RSSDGHHRSSGIHQSQFPASGRSSLPSRQP*CSTSQRQ*AAA 200 R SDG SS Q Q SLP R+P STSQ+ AAA Sbjct: 647 RQSDGTPYSSA--QPQRDTRSIGSLPEREPSASTSQKDLAAA 686
>LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late envelope protein| 5) Length = 118 Score = 29.3 bits (64), Expect = 4.4 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Frame = -3 Query: 394 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 245 S + GCCG SC S G SS G HHR H+ + +S S PS Sbjct: 45 SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDCCSQPS 100
>OPGH_CAUCR (Q9A6R5) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)| Length = 663 Score = 28.5 bits (62), Expect = 7.6 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +1 Query: 343 FCKSSGAVSRNILQELQKMGIIDVDPRVEAH 435 FC S+G +SR ++ EL+K D + AH Sbjct: 428 FCLSAGLISRALMPELKKAAFTMADLKAAAH 458
>KCNA4_BOVIN (Q05037) Potassium voltage-gated channel subfamily A member 4| (Voltage-gated potassium channel subunit Kv1.4) (BAK4) Length = 660 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = -3 Query: 337 GGVNRSSDGHHRSSGIHQSQFPASGRSSLPSRQP 236 GG S HH S G S P SGR S R+P Sbjct: 55 GGSGGSQHHHHPSRGACTSHDPQSGRGSRRRRRP 88 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,526,630 Number of Sequences: 219361 Number of extensions: 1160479 Number of successful extensions: 3951 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 3812 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3939 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
