| Clone Name | bast56e03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476895.1| Oryza sativa (japonica cultivar-group), mRNA Length = 669 Score = 367 bits (185), Expect = 2e-98 Identities = 266/293 (90%) Strand = Plus / Plus Query: 90 gcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggacgttc 149 ||||||||||| || ||||||||||| ||||| ||||| ||||| ||||||||||||||| Sbjct: 208 gcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggacgttc 267 Query: 150 cgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccgacgac 209 ||||||| ||||||||||||||| || ||||| || ||||| |||||||||||||| ||| Sbjct: 268 cgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccgatgac 327 Query: 210 cttgtccagatgttccccgctcgcgcccgcagaaggttcaagaggggtctcaagaggaag 269 || |||||| | |||||||| |||||||||||||||||| |||||||||| ||||||||| Sbjct: 328 ctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagaggaag 387 Query: 270 cccatggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtgagaag 329 ||||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||| Sbjct: 388 cccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcgagaag 447 Query: 330 ccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatgat 382 ||||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 448 ccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgat 500
>ref|XM_469972.1| Oryza sativa (japonica cultivar-group), mRNA Length = 713 Score = 333 bits (168), Expect = 3e-88 Identities = 264/296 (89%) Strand = Plus / Plus Query: 87 atggcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggacg 146 |||||||| ||||| || ||| ||||||||||||||| || |||||||||||||||| Sbjct: 69 atggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacg 128 Query: 147 ttccgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccgac 206 |||||||||| |||||||||||||||||| ||||| || ||||| ||||||||||||||| Sbjct: 129 ttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgac 188 Query: 207 gaccttgtccagatgttccccgctcgcgcccgcagaaggttcaagaggggtctcaagagg 266 ||||| |||||| | |||||||| |||||||||||||||||| ||||||| || |||||| Sbjct: 189 gacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaagagg 248 Query: 267 aagcccatggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtgag 326 |||||||||||||| |||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 249 aagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgag 308 Query: 327 aagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatgat 382 ||||||||||| |||||||| || ||| | |||||||||||||| ||||||||||| Sbjct: 309 aagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgat 364
>dbj|AK121716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079G18, full insert sequence Length = 758 Score = 333 bits (168), Expect = 3e-88 Identities = 264/296 (89%) Strand = Plus / Plus Query: 87 atggcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggacg 146 |||||||| ||||| || ||| ||||||||||||||| || |||||||||||||||| Sbjct: 98 atggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacg 157 Query: 147 ttccgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccgac 206 |||||||||| |||||||||||||||||| ||||| || ||||| ||||||||||||||| Sbjct: 158 ttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgac 217 Query: 207 gaccttgtccagatgttccccgctcgcgcccgcagaaggttcaagaggggtctcaagagg 266 ||||| |||||| | |||||||| |||||||||||||||||| ||||||| || |||||| Sbjct: 218 gacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaagagg 277 Query: 267 aagcccatggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtgag 326 |||||||||||||| |||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 278 aagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgag 337 Query: 327 aagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatgat 382 ||||||||||| |||||||| || ||| | |||||||||||||| ||||||||||| Sbjct: 338 aagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgat 393
>gb|BT016195.1| Zea mays clone Contig28 mRNA sequence Length = 815 Score = 329 bits (166), Expect = 4e-87 Identities = 267/300 (89%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 86 catggcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggac 145 ||||||||||||||| || || ||||||| ||||| ||||| | | ||||||||||| Sbjct: 117 catggcggacgtcgatgtcgaaccggaggttgccgccggcgctc---ccaagaagaggac 173 Query: 146 gttccgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccga 205 ||||||||||| ||||||||||||||| || || ||||| || || ||||||||||| || Sbjct: 174 gttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccacgga 233 Query: 206 cgaccttgtccagatgttccccgctcgcgcccgcagaaggttcaagaggggtctcaagag 265 |||||| |||||| | |||||||| |||||| | ||||||||| |||||||||| ||||| Sbjct: 234 cgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaagag 293 Query: 266 gaagcccatggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtga 325 |||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 294 gaagcccatggcactcatcaagaagctgcgcaaggcgaaaaaggatgctcctgctggtga 353 Query: 326 gaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatgattgg 385 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 gaagccagagccagtcaagacacatctccgtaacatgatcattgtccctgagatgattgg 413
>dbj|AK059639.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B03, full insert sequence Length = 1569 Score = 325 bits (164), Expect = 6e-86 Identities = 263/296 (88%) Strand = Plus / Plus Query: 87 atggcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggacg 146 |||||||| ||||| || ||| ||||||||||||||| || |||||||||||||||| Sbjct: 830 atggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacg 889 Query: 147 ttccgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccgac 206 |||||||||| |||||||||||| ||||| ||||| || ||||| ||||||||||||||| Sbjct: 890 ttccgcaagtacagctaccgcggtgtggacctcgacgcgctcctcgacatgtccaccgac 949 Query: 207 gaccttgtccagatgttccccgctcgcgcccgcagaaggttcaagaggggtctcaagagg 266 ||||| |||||| | |||||||| |||||||||||||||||| ||||||| || |||||| Sbjct: 950 gacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaagagg 1009 Query: 267 aagcccatggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtgag 326 |||||||||||||| |||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 1010 aagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgag 1069 Query: 327 aagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatgat 382 ||||||||||| |||||||| || ||| | |||||||||||||| ||||||||||| Sbjct: 1070 aagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgat 1125
>dbj|D10962.1|RIC488S15 Oryza sativa mRNA for ribosomal protein S15, complete cds Length = 697 Score = 309 bits (156), Expect = 4e-81 Identities = 264/297 (88%), Gaps = 6/297 (2%) Strand = Plus / Plus Query: 86 catggcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggac 145 ||||||||||||||| || ||||||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 17 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 76 Query: 146 gttccgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccga 205 ||||||||||| ||||||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 77 gttccgcaagtacagctaccgcggcgtcgacctcga---gctcctcgacatgtccaccga 133 Query: 206 cgaccttgtccagatgttccccgctcgcgcccgcagaaggttcaagaggggtctcaagag 265 ||||| |||||| | |||||||| |||||||| ||||||||| |||||||||| ||||| Sbjct: 134 tgacctcgtccagctcttccccgcgcgcgcccgtagaaggttccagaggggtctgaagag 193 Query: 266 gaagcccatggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtga 325 |||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||| || Sbjct: 194 gaagcccatg--gctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 251 Query: 326 gaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatgat 382 |||| |||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 252 gaag-cagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgat 307
>gb|AY109338.1| Zea mays CL3583_1 mRNA sequence Length = 961 Score = 299 bits (151), Expect = 4e-78 Identities = 262/300 (87%), Gaps = 3/300 (1%) Strand = Plus / Minus Query: 86 catggcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggac 145 ||||||||||||||| || || ||||||| ||||| ||||| | | ||||||||||| Sbjct: 893 catggcggacgtcgatgtcgaaccggaggttgccgccggcgctc---ccaagaagaggac 837 Query: 146 gttccgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccga 205 ||||||||||| ||||||||||||||| || || ||||| || || ||||||||||| || Sbjct: 836 gttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccacgga 777 Query: 206 cgaccttgtccagatgttccccgctcgcgcccgcagaaggttcaagaggggtctcaagag 265 |||||| |||||| | |||||||| |||||| | ||||||||| |||||||||| ||||| Sbjct: 776 cgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaagag 717 Query: 266 gaagcccatggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtga 325 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 716 gaagcccatggcgctcatcaagaagctgcgcaaggcgnnnnnggatgctcctgctggtga 657 Query: 326 gaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatgattgg 385 ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 gaaaccagagccagtcaagacacatctccgtaacatgatcattgtccctgagatgattgg 597
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 178 bits (90), Expect = 9e-42 Identities = 141/158 (89%) Strand = Plus / Minus Query: 89 ggcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggacgtt 148 |||||||||||| || ||||||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 4494614 ggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggacgtt 4494555 Query: 149 ccgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccgacga 208 |||||||| ||||||||||||||| || ||||| || ||||| |||||||||||||| || Sbjct: 4494554 ccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccgatga 4494495 Query: 209 ccttgtccagatgttccccgctcgcgcccgcagaaggt 246 ||| |||||| | |||||||| |||||||||||||||| Sbjct: 4494494 cctcgtccagctcttccccgcgcgcgcccgcagaaggt 4494457 Score = 113 bits (57), Expect = 4e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 302 gaaaaaagatgctcctgctggtgagaagccagagccagtgaggacacatctccgtaacat 361 |||||| ||||| |||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 4493226 gaaaaaggatgcccctgctggcgagaagccagagccagtgaggacccacctccgcaacat 4493167 Query: 362 gatcattgtccctgagatgat 382 ||||||||||||||||||||| Sbjct: 4493166 gatcattgtccctgagatgat 4493146 Score = 87.7 bits (44), Expect = 3e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 243 aggttcaagaggggtctcaagaggaagcccatggcgcttgtcaagaagctgcgcaaggcg 302 |||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 4494328 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 4494269
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 178 bits (90), Expect = 9e-42 Identities = 141/158 (89%) Strand = Plus / Minus Query: 89 ggcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggacgtt 148 |||||||||||| || ||||||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 73333 ggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggacgtt 73274 Query: 149 ccgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccgacga 208 |||||||| ||||||||||||||| || ||||| || ||||| |||||||||||||| || Sbjct: 73273 ccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccgatga 73214 Query: 209 ccttgtccagatgttccccgctcgcgcccgcagaaggt 246 ||| |||||| | |||||||| |||||||||||||||| Sbjct: 73213 cctcgtccagctcttccccgcgcgcgcccgcagaaggt 73176 Score = 113 bits (57), Expect = 4e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 302 gaaaaaagatgctcctgctggtgagaagccagagccagtgaggacacatctccgtaacat 361 |||||| ||||| |||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 71945 gaaaaaggatgcccctgctggcgagaagccagagccagtgaggacccacctccgcaacat 71886 Query: 362 gatcattgtccctgagatgat 382 ||||||||||||||||||||| Sbjct: 71885 gatcattgtccctgagatgat 71865 Score = 87.7 bits (44), Expect = 3e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 243 aggttcaagaggggtctcaagaggaagcccatggcgcttgtcaagaagctgcgcaaggcg 302 |||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 73047 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 72988
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 172 bits (87), Expect = 6e-40 Identities = 141/159 (88%) Strand = Plus / Minus Query: 89 ggcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggacgtt 148 |||||| ||||| || ||| ||||||||||||||| || |||||||||||||||||| Sbjct: 32989179 ggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacgtt 32989120 Query: 149 ccgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccgacga 208 |||||||| |||||||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 32989119 ccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgacga 32989060 Query: 209 ccttgtccagatgttccccgctcgcgcccgcagaaggtt 247 ||| |||||| | |||||||| ||||||||||||||||| Sbjct: 32989059 cctcgtccagctcttccccgcgcgcgcccgcagaaggtt 32989021 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Minus Query: 302 gaaaaaagatgctcctgctggtgagaagccagagccagtgaggacacatctccgtaacat 361 |||||| ||||| ||||||||||||||||||||||| |||||||| || ||| | ||||| Sbjct: 32987360 gaaaaaggatgcacctgctggtgagaagccagagcctgtgaggacccacctcaggaacat 32987301 Query: 362 gatcattgtccctgagatgat 382 ||||||||| ||||||||||| Sbjct: 32987300 gatcattgtgcctgagatgat 32987280 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 243 aggttcaagaggggtctcaagaggaagcccatggcgcttgtcaagaagctgcgcaaggcg 302 |||||| ||||||| || |||||||||||||||||||| |||||||||| ||||||||| Sbjct: 32988941 aggttccagaggggcctgaagaggaagcccatggcgctcatcaagaagctccgcaaggcg 32988882
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 172 bits (87), Expect = 6e-40 Identities = 141/159 (88%) Strand = Plus / Plus Query: 89 ggcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggacgtt 148 |||||| ||||| || ||| ||||||||||||||| || |||||||||||||||||| Sbjct: 996 ggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacgtt 1055 Query: 149 ccgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccgacga 208 |||||||| |||||||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 1056 ccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgacga 1115 Query: 209 ccttgtccagatgttccccgctcgcgcccgcagaaggtt 247 ||| |||||| | |||||||| ||||||||||||||||| Sbjct: 1116 cctcgtccagctcttccccgcgcgcgcccgcagaaggtt 1154 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 302 gaaaaaagatgctcctgctggtgagaagccagagccagtgaggacacatctccgtaacat 361 |||||| ||||| ||||||||||||||||||||||| |||||||| || ||| | ||||| Sbjct: 2815 gaaaaaggatgcacctgctggtgagaagccagagcctgtgaggacccacctcaggaacat 2874 Query: 362 gatcattgtccctgagatgat 382 ||||||||| ||||||||||| Sbjct: 2875 gatcattgtgcctgagatgat 2895 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 243 aggttcaagaggggtctcaagaggaagcccatggcgcttgtcaagaagctgcgcaaggcg 302 |||||| ||||||| || |||||||||||||||||||| |||||||||| ||||||||| Sbjct: 1234 aggttccagaggggcctgaagaggaagcccatggcgctcatcaagaagctccgcaaggcg 1293
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 172 bits (87), Expect = 6e-40 Identities = 141/159 (88%) Strand = Plus / Minus Query: 89 ggcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggacgtt 148 |||||| ||||| || ||| ||||||||||||||| || |||||||||||||||||| Sbjct: 33079689 ggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacgtt 33079630 Query: 149 ccgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccgacga 208 |||||||| |||||||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 33079629 ccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgacga 33079570 Query: 209 ccttgtccagatgttccccgctcgcgcccgcagaaggtt 247 ||| |||||| | |||||||| ||||||||||||||||| Sbjct: 33079569 cctcgtccagctcttccccgcgcgcgcccgcagaaggtt 33079531 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Minus Query: 302 gaaaaaagatgctcctgctggtgagaagccagagccagtgaggacacatctccgtaacat 361 |||||| ||||| ||||||||||||||||||||||| |||||||| || ||| | ||||| Sbjct: 33077870 gaaaaaggatgcacctgctggtgagaagccagagcctgtgaggacccacctcaggaacat 33077811 Query: 362 gatcattgtccctgagatgat 382 ||||||||| ||||||||||| Sbjct: 33077810 gatcattgtgcctgagatgat 33077790 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 243 aggttcaagaggggtctcaagaggaagcccatggcgcttgtcaagaagctgcgcaaggcg 302 |||||| ||||||| || |||||||||||||||||||| |||||||||| ||||||||| Sbjct: 33079451 aggttccagaggggcctgaagaggaagcccatggcgctcatcaagaagctccgcaaggcg 33079392
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 172 bits (87), Expect = 6e-40 Identities = 141/159 (88%) Strand = Plus / Plus Query: 89 ggcggacgtcgacgttgagacggaggtggccgcgggcgcgcagccgaagaagaggacgtt 148 |||||| ||||| || ||| ||||||||||||||| || |||||||||||||||||| Sbjct: 134129 ggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacgtt 134188 Query: 149 ccgcaagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccgacga 208 |||||||| |||||||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 134189 ccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgacga 134248 Query: 209 ccttgtccagatgttccccgctcgcgcccgcagaaggtt 247 ||| |||||| | |||||||| ||||||||||||||||| Sbjct: 134249 cctcgtccagctcttccccgcgcgcgcccgcagaaggtt 134287 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 302 gaaaaaagatgctcctgctggtgagaagccagagccagtgaggacacatctccgtaacat 361 |||||| ||||| ||||||||||||||||||||||| |||||||| || ||| | ||||| Sbjct: 135948 gaaaaaggatgcacctgctggtgagaagccagagcctgtgaggacccacctcaggaacat 136007 Query: 362 gatcattgtccctgagatgat 382 ||||||||| ||||||||||| Sbjct: 136008 gatcattgtgcctgagatgat 136028 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 243 aggttcaagaggggtctcaagaggaagcccatggcgcttgtcaagaagctgcgcaaggcg 302 |||||| ||||||| || |||||||||||||||||||| |||||||||| ||||||||| Sbjct: 134367 aggttccagaggggcctgaagaggaagcccatggcgctcatcaagaagctccgcaaggcg 134426
>gb|AF404770.1|AF404770 Elaeis oleifera 40S ribosomal protein S15 (rps15) mRNA, complete cds Length = 874 Score = 141 bits (71), Expect = 2e-30 Identities = 224/275 (81%) Strand = Plus / Plus Query: 126 gcgcagccgaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcgatgcc 185 |||||||||||||||||||||||| | |||||| ||| || || || |||||||| Sbjct: 99 gcgcagccgaagaagaggacgttcaggaagttctcctatcgaggggtcgatctcgaccag 158 Query: 186 ctccttgacatgtccaccgacgaccttgtccagatgttccccgctcgcgcccgcagaagg 245 ||||| |||||| ||||||||| |||||| || | |||| || || || ||||||||| Sbjct: 159 ctcctcgacatgggcaccgacgagcttgtcaagctcttccatgcccgggctcgcagaagg 218 Query: 246 ttcaagaggggtctcaagaggaagcccatggcgcttgtcaagaagctgcgcaaggcgaaa 305 || |||| ||||| ||||||||||| ||||| || |||||||||| ||||||||||| Sbjct: 219 tttcagagaggtcttaagaggaagcctatggctctgatcaagaagcttcgcaaggcgaag 278 Query: 306 aaagatgctcctgctggtgagaagccagagccagtgaggacacatctccgtaacatgatc 365 ||||||||| |||| |||||||| || || ||||||||||| || || |||||||| Sbjct: 279 cgtgatgctcctcctggggagaagcctgaacctgtgaggacacaccttcggaacatgata 338 Query: 366 attgtccctgagatgattggcagccttatcggtgt 400 || ||||| ||||||||||| ||| | |||||||| Sbjct: 339 atagtcccagagatgattggaagcatcatcggtgt 373
>gb|AY112282.1| Zea mays CL3583_-3 mRNA sequence Length = 623 Score = 111 bits (56), Expect = 2e-21 Identities = 90/103 (87%) Strand = Plus / Minus Query: 283 tcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtgagaagccagagccagtga 342 |||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 460 tcaagaagctgcgcaaggcgnnnnnggatgctcctgtcggcgagaagccagagccagtga 401 Query: 343 ggacacatctccgtaacatgatcattgtccctgagatgattgg 385 ||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 400 agacccatctccgcaacatgatcattgtccccgagatgattgg 358
>gb|AF051217.1|AF051217 Picea mariana probable 40S ribosomal protein S15 (Sb23) mRNA, complete cds Length = 760 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 283 tcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtgagaagccagagccagtga 342 |||||||||| || || |||||| || |||||| | |||||||||||||||||||| | Sbjct: 249 tcaagaagctccgtaaagcgaaacgggaagctccttcaggtgagaagccagagccagtta 308 Query: 343 ggacacatctccgtaacatgatcattgtccctgagatgattggcagccttatcggtgt 400 | || || |||||||||||||| ||||| |||||||||||||| ||| |||| ||||| Sbjct: 309 gaacccacctccgtaacatgataattgttcctgagatgattgggagcattattggtgt 366
>gb|DQ284481.1| Solanum tuberosum clone 172F01 40S ribosomal protein S15-like mRNA, complete cds Length = 747 Score = 89.7 bits (45), Expect = 6e-15 Identities = 186/233 (79%) Strand = Plus / Plus Query: 153 aagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccgacgacctt 212 |||||||||||| | || || ||||| ||| | || ||||||||||| || || || ||| Sbjct: 115 aagttcagctacagaggagtagatctggattctcttcttgacatgtctactgatgagctt 174 Query: 213 gtccagatgttccccgctcgcgcccgcagaaggttcaagaggggtctcaagaggaagccc 272 || || | ||||| || || | |||||||||||| |||||||| | ||||||||||| Sbjct: 175 gttaagcttttccctgcgcgtcctcgcagaaggttccagaggggtttgaagaggaagcct 234 Query: 273 atggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtgagaagcca 332 ||||| | |||||||||| |||||||||||| || || || ||||||||||||| Sbjct: 235 atggctttgatcaagaagctccgcaaggcgaaacgtgaggccccacctggtgagaagccg 294 Query: 333 gagccagtgaggacacatctccgtaacatgatcattgtccctgagatgattgg 385 ||| ||||| |||||| | | |||||||||||||| |||||||||||||| Sbjct: 295 gaggttgtgagaacacatttgaggaacatgatcattgttcctgagatgattgg 347
>gb|DQ252517.1| Solanum tuberosum clone 098B01 40S ribosomal protein S15-like mRNA, complete cds Length = 607 Score = 89.7 bits (45), Expect = 6e-15 Identities = 123/149 (82%) Strand = Plus / Plus Query: 237 cgcagaaggttcaagaggggtctcaagaggaagcccatggcgcttgtcaagaagctgcgc 296 |||||||||||| |||||||| | ||||||||||| ||||| | |||||||||| ||| Sbjct: 186 cgcagaaggttccagaggggtttgaagaggaagcctatggctttgatcaagaagctccgc 245 Query: 297 aaggcgaaaaaagatgctcctgctggtgagaagccagagccagtgaggacacatctccgt 356 ||||||||| || || || ||||||||||||| ||| ||||| |||||| | | Sbjct: 246 aaggcgaaacgtgaggccccacctggtgagaagccggaggttgtgagaacacatttgagg 305 Query: 357 aacatgatcattgtccctgagatgattgg 385 |||||||||||||| |||||||||||||| Sbjct: 306 aacatgatcattgttcctgagatgattgg 334
>gb|AC150979.15| Medicago truncatula clone mth2-115a17, complete sequence Length = 152779 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 319 ctggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgaga 378 |||||||||||||||| || || ||||| ||||| ||||||||||||||||| ||||||| Sbjct: 146561 ctggtgagaagccagaacctgttaggacccatcttcgtaacatgatcattgtacctgaga 146502 Query: 379 tgattggcagccttat 394 ||||||| ||| |||| Sbjct: 146501 tgattgggagcattat 146486
>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence Length = 120870 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 319 ctggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgaga 378 |||||||||||||||| || || ||||| ||||| ||||||||||||||||| ||||||| Sbjct: 43893 ctggtgagaagccagaacctgttaggacccatcttcgtaacatgatcattgtacctgaga 43834 Query: 379 tgattggcagccttat 394 ||||||| ||| |||| Sbjct: 43833 tgattgggagcattat 43818
>gb|AF534882.1| Dunaliella tertiolecta S15 ribosomal protein (S15) mRNA, complete cds Length = 546 Score = 83.8 bits (42), Expect = 4e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 261 aagaggaagcccatggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgct 320 ||||||||||| ||||||| ||||||||||||||||||| || || || || || Sbjct: 173 aagaggaagcctctggcgctcatcaagaagctgcgcaaggccaagaaggaggcccccaag 232 Query: 321 ggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatg 380 || |||||||| ||||| |||||||| || ||||| |||||||||||||| || |||||| Sbjct: 233 ggcgagaagcccgagcctgtgaggacgcacctccgcaacatgatcattgtgcccgagatg 292 Query: 381 attggc 386 |||||| Sbjct: 293 attggc 298
>gb|AF439281.1|AF439281 Retama raetam ribosomal S15 protein (S15) mRNA, partial cds Length = 654 Score = 83.8 bits (42), Expect = 4e-13 Identities = 122/146 (83%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 241 gaaggttcaagaggggtctcaagaggaagcccatggcgcttg-tcaagaagctgcgcaag 299 |||||||| |||| ||||||| |||||||||||||| |||| |||||||||| |||||| Sbjct: 111 gaaggttccagagaggtctcaccaggaagcccatggc-cttgatcaagaagcttcgcaag 169 Query: 300 gcgaaaaaagatgctcctgctggtgagaagccagagccagtgaggacacatctccgtaac 359 ||||||| || || ||| ||||||||||||||||| || | || || ||||| ||| Sbjct: 170 gcgaaaagggaagcacctcaaggtgagaagccagagcctgtccgcactcacctccgcaac 229 Query: 360 atgatcattgtccctgagatgattgg 385 ||||| ||||| || ||||||||||| Sbjct: 230 atgattattgtgcccgagatgattgg 255
>gb|DQ284469.1| Solanum tuberosum clone 109D08 40S ribosomal protein S15-like mRNA, complete cds Length = 695 Score = 81.8 bits (41), Expect = 2e-12 Identities = 185/233 (79%) Strand = Plus / Plus Query: 153 aagttcagctaccgcggcgtggatctcgatgccctccttgacatgtccaccgacgacctt 212 |||||||||||| | || || ||||| ||| | || ||||||||||| || || || ||| Sbjct: 116 aagttcagctacagaggagtagatctggattctcttcttgacatgtctactgatgagctt 175 Query: 213 gtccagatgttccccgctcgcgcccgcagaaggttcaagaggggtctcaagaggaagccc 272 || | | ||||| ||||| | |||||||||||| |||||||| | ||||||||||| Sbjct: 176 gttaaacttttccctgctcgtcctcgcagaaggttccagaggggtttgaagaggaagcct 235 Query: 273 atggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtgagaagcca 332 ||||| | ||||||| || |||||||||||| || || || ||||||||||||| Sbjct: 236 atggctttgatcaagaaactccgcaaggcgaaacgtgaggccccacctggtgagaagccg 295 Query: 333 gagccagtgaggacacatctccgtaacatgatcattgtccctgagatgattgg 385 ||| ||||| |||||| | | |||||||||||||| |||||||||||||| Sbjct: 296 gaggttgtgagaacacatttgaggaacatgatcattgttcctgagatgattgg 348
>gb|AF534883.1| Dunaliella tertiolecta S15 ribosomal protein (S15) gene, complete cds Length = 3592 Score = 77.8 bits (39), Expect = 2e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 264 aggaagcccatggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctggt 323 |||||||| ||||||| ||||||||||||||||||| || || || || || || Sbjct: 1717 aggaagcctctggcgctcatcaagaagctgcgcaaggccaagaaggaggcccccaagggc 1776 Query: 324 gagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatgatt 383 |||||||| ||||| |||||||| || ||||| |||||||||||||| || ||||||||| Sbjct: 1777 gagaagcccgagcctgtgaggacgcacctccgcaacatgatcattgtgcccgagatgatt 1836 Query: 384 ggc 386 ||| Sbjct: 1837 ggc 1839
>ref|NM_120988.2| Arabidopsis thaliana structural constituent of ribosome AT5G09510 mRNA, complete cds Length = 1163 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 285 aagaagctgcgcaaggcgaaaaaagatgctcctgctggtgagaagccagagccagtgagg 344 ||||| || ||||||||||||| ||| || || ||||||||||||||||| |||||||| Sbjct: 312 aagaaactccgcaaggcgaaaagagaggcaccagctggtgagaagccagaaccagtgaga 371 Query: 345 acacatctccgtaacatgatcattgtccctgagatgattgg 385 || || | | |||||||||||||| ||||| |||||||| Sbjct: 372 acccacttgaggaacatgatcattgtgcctgaaatgattgg 412
>gb|AY096616.1| Arabidopsis thaliana putative ribosomal protein S15 (AT5g09510) mRNA, complete cds Length = 490 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 285 aagaagctgcgcaaggcgaaaaaagatgctcctgctggtgagaagccagagccagtgagg 344 ||||| || ||||||||||||| ||| || || ||||||||||||||||| |||||||| Sbjct: 193 aagaaactccgcaaggcgaaaagagaggcaccagctggtgagaagccagaaccagtgaga 252 Query: 345 acacatctccgtaacatgatcattgtccctgagatgattgg 385 || || | | |||||||||||||| ||||| |||||||| Sbjct: 253 acccacttgaggaacatgatcattgtgcctgaaatgattgg 293
>gb|AY050966.1| Arabidopsis thaliana putative ribosomal protein S15 (At5g09510) mRNA, complete cds Length = 1160 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 285 aagaagctgcgcaaggcgaaaaaagatgctcctgctggtgagaagccagagccagtgagg 344 ||||| || ||||||||||||| ||| || || ||||||||||||||||| |||||||| Sbjct: 272 aagaaactccgcaaggcgaaaagagaggcaccagctggtgagaagccagaaccagtgaga 331 Query: 345 acacatctccgtaacatgatcattgtccctgagatgattgg 385 || || | | |||||||||||||| ||||| |||||||| Sbjct: 332 acccacttgaggaacatgatcattgtgcctgaaatgattgg 372
>gb|AY085630.1| Arabidopsis thaliana clone 164 mRNA, complete sequence Length = 753 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 285 aagaagctgcgcaaggcgaaaaaagatgctcctgctggtgagaagccagagccagtgagg 344 ||||| || ||||||||||||| ||| || || ||||||||||||||||| |||||||| Sbjct: 312 aagaaactccgcaaggcgaaaagagaggcaccagctggtgagaagccagaaccagtgaga 371 Query: 345 acacatctccgtaacatgatcattgtccctgagatgattgg 385 || || | | |||||||||||||| ||||| |||||||| Sbjct: 372 acccacttgaggaacatgatcattgtgcctgaaatgattgg 412
>gb|BC105810.1| Homo sapiens ribosomal protein S15, mRNA (cDNA clone MGC:111130 IMAGE:6744553), complete cds Length = 537 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 61 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 108
>gb|BC080543.1| Homo sapiens cDNA clone IMAGE:5556479, with apparent retained intron Length = 1629 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 37 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 84
>gb|BC064908.1| Homo sapiens ribosomal protein S15, mRNA (cDNA clone MGC:70657 IMAGE:6053159), complete cds Length = 539 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 27 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 74
>ref|NM_001018.3| Homo sapiens ribosomal protein S15 (RPS15), mRNA Length = 531 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 83 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 130
>emb|AJ251916.1|PSA251916 Pisum sativum partial mRNA for ribosomal protein S15 (rpS15 gene) Length = 455 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 319 ctggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgaga 378 |||||||||||||||| || || ||||| ||||| ||||||||||| ||||| || |||| Sbjct: 32 ctggtgagaagccagaacctgtaaggacccatcttcgtaacatgattattgtacccgaga 91 Query: 379 tgat 382 |||| Sbjct: 92 tgat 95
>gb|AC027307.5| Homo sapiens chromosome 19 clone CTB-25B13, complete sequence Length = 153570 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 28647 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 28694
>emb|CR597356.1| full-length cDNA clone CS0DM004YD13 of Fetal liver of Homo sapiens (human) Length = 468 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 19 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 66
>emb|CR593936.1| full-length cDNA clone CS0DA002YL13 of Neuroblastoma of Homo sapiens (human) Length = 467 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 19 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 66
>emb|CR592941.1| full-length cDNA clone CS0DC025YD18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 611 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 162 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 209
>ref|NM_214334.1| Sus scrofa rig-analog DNA-binding protein (RPS15), mRNA Length = 479 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 23 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 70
>gb|AY891970.1| Synthetic construct Homo sapiens clone FLH028831.01L ribosomal protein S15 (RPS15) mRNA, partial cds Length = 438 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 21 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 68
>emb|AJ333958.1|HSA333958 Homo sapiens genomic sequence surrounding NotI site, clone NL4-DA1R Length = 756 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 83 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 36
>gb|M32405.1|HUMRIGA Human homologue of rat insulinoma gene (rig), exons 1-4 Length = 2862 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 993 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 1040
>gb|J02984.1|HUMIDB Human insulinoma rig-analog mRNA encoding DNA-binding protein, complete cds Length = 498 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 50 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 97
>dbj|AB005624.1| Sus scrofa mRNA for rig-analog DNA-binding protein, complete cds Length = 479 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 23 gaagaagcggaccttccgcaagttcacctaccgcggcgtggacctcga 70
>gb|DQ263744.1| Mytilus edulis ribosomal protein S15 mRNA, partial cds Length = 410 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 354 cgtaacatgatcattgtccctgagatgattggcag 388 |||||||||||||||||||| |||||||||||||| Sbjct: 318 cgtaacatgatcattgtcccagagatgattggcag 352
>ref|XM_512237.1| PREDICTED: Pan troglodytes similar to ribosomal protein S15; rat insulinoma gene (LOC455550), mRNA Length = 550 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtgga 175 ||||||| |||| ||||||||||||| ||||||||||||||| Sbjct: 101 gaagaagcggaccttccgcaagttcacctaccgcggcgtgga 142
>emb|AL355472.19| Human DNA sequence from clone RP5-827C21 on chromosome 1 Contains a ribosomal protein S15 (RPS15) pseudogene, three novel genes (LOC388753), the 3' end of the TARBP1 gene for TAR (HIV) RNA binding protein 1 and a CpG island, complete sequence Length = 92628 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtgga 175 ||||||| |||| ||||||||||||| ||||||||||||||| Sbjct: 29407 gaagaagcggaccttccgcaagttcacctaccgcggcgtgga 29366
>emb|CR857922.1| Pongo pygmaeus mRNA; cDNA DKFZp469I158 (from clone DKFZp469I158) Length = 677 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtgga 175 ||||||| |||| ||||||||||||| ||||||||||||||| Sbjct: 44 gaagaagcggaccttccgcaagttcacctaccgcggcgtgga 85
>ref|XM_940289.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S15 (RIG protein), transcript variant 3 (LOC401019), mRNA Length = 534 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtgga 175 ||||||| |||| ||||||||||||| ||||||||||||||| Sbjct: 51 gaagaagcggaccttccgcaagttcacctaccgcggcgtgga 92
>ref|XM_376154.3| PREDICTED: Homo sapiens similar to 40S ribosomal protein S15 (RIG protein), transcript variant 1 (LOC401019), mRNA Length = 534 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtgga 175 ||||||| |||| ||||||||||||| ||||||||||||||| Sbjct: 51 gaagaagcggaccttccgcaagttcacctaccgcggcgtgga 92
>ref|XM_939370.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S15 (RIG protein) (LOC650283), mRNA Length = 512 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtgga 175 ||||||| |||| ||||||||||||| ||||||||||||||| Sbjct: 45 gaagaagcggaccttccgcaagttcacctaccgcggcgtgga 86
>ref|XM_496442.2| PREDICTED: Homo sapiens similar to 40S ribosomal protein S15 (RIG protein) (LOC440733), mRNA Length = 514 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtgga 175 ||||||| |||| ||||||||||||| ||||||||||||||| Sbjct: 45 gaagaagcggaccttccgcaagttcacctaccgcggcgtgga 86
>gb|AC007969.3| Homo sapiens BAC clone RP11-471A5 from 2, complete sequence Length = 162760 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtgga 175 ||||||| |||| ||||||||||||| ||||||||||||||| Sbjct: 54119 gaagaagcggaccttccgcaagttcacctaccgcggcgtgga 54160
>gb|J02983.1|HAMRIG Syrian golden hamster insulinoma rig mRNA, encoding a putative DNA-binding protein Length = 486 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtgga 175 ||||||| |||| ||||||||||||| ||||||||||||||| Sbjct: 43 gaagaagcggaccttccgcaagttcacctaccgcggcgtgga 84
>ref|NM_125701.1| Arabidopsis thaliana structural constituent of ribosome AT5G63070 mRNA, complete cds Length = 483 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 357 aacatgatcattgtccctgagatgattgg 385 ||||||||||||||||||||||||||||| Sbjct: 277 aacatgatcattgtccctgagatgattgg 305
>ref|XM_750249.1| Aspergillus fumigatus Af293 ribosomal protein S15 (Afu2g10090) partial mRNA Length = 513 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 358 acatgatcattgtccctgagatgattggcagccttatcggt 398 ||||||||||||||||||||||||| |||||| | |||||| Sbjct: 320 acatgatcattgtccctgagatgatcggcagcgtcatcggt 360
>gb|DQ056736.1| Arabidopsis thaliana putative 40S ribosomal protein S15 (At5g63070) mRNA, complete cds Length = 483 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 357 aacatgatcattgtccctgagatgattgg 385 ||||||||||||||||||||||||||||| Sbjct: 277 aacatgatcattgtccctgagatgattgg 305
>dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDC12 Length = 81662 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 357 aacatgatcattgtccctgagatgattgg 385 ||||||||||||||||||||||||||||| Sbjct: 8019 aacatgatcattgtccctgagatgattgg 7991
>ref|XM_960071.1| Neurospora crassa OR74A hypothetical protein (NCU00971.1) partial mRNA Length = 459 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 351 ctccgtaacatgatcattgtccctgagatgattggcagccttatcggt 398 |||||| |||||||| ||||||| ||||||||||||||| | |||||| Sbjct: 259 ctccgtgacatgatcgttgtccccgagatgattggcagcgtcatcggt 306
>ref|XM_325150.1| Neurospora crassa OR74A hypothetical protein (NCU00971.1) partial mRNA Length = 459 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 351 ctccgtaacatgatcattgtccctgagatgattggcagccttatcggt 398 |||||| |||||||| ||||||| ||||||||||||||| | |||||| Sbjct: 259 ctccgtgacatgatcgttgtccccgagatgattggcagcgtcatcggt 306
>ref|NM_001024541.1| Bos taurus ribosomal protein S15-like (LOC514569), mRNA Length = 490 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| |||||||||||| || ||||| Sbjct: 42 gaagaagcggaccttccgcaagttcacctaccgcggcgtagacctcga 89
>emb|BX842629.1| Neurospora crassa DNA linkage group I BAC contig B20J13 Length = 126048 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 351 ctccgtaacatgatcattgtccctgagatgattggcagccttatcggt 398 |||||| |||||||| ||||||| ||||||||||||||| | |||||| Sbjct: 70698 ctccgtgacatgatcgttgtccccgagatgattggcagcgtcatcggt 70651
>emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5, BAC clone T5E8 (ESSA project) Length = 103534 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 318 gctggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgag 377 ||||||||||||||||| |||||||| || || | | |||||||||||||| ||||| Sbjct: 96716 gctggtgagaagccagaaccagtgagaacccacttgaggaacatgatcattgtgcctgaa 96657 Query: 378 atgattgg 385 |||||||| Sbjct: 96656 atgattgg 96649 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 357 aacatgatcattgtccctgagatgattggcagccttatcggtgt 400 |||||||||||||| ||||| |||||||| ||| | |||||||| Sbjct: 95023 aacatgatcattgtgcctgaaatgattggaagcgtcatcggtgt 94980
>gb|BC102068.1| Bos taurus ribosomal protein S15-like, mRNA (cDNA clone MGC:127050 IMAGE:7942821), complete cds Length = 546 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| |||||||||||| || ||||| Sbjct: 82 gaagaagcggaccttccgcaagttcacctaccgcggcgtagacctcga 129
>gb|AY911317.1| Bos taurus clone IMAGE:7961456 ribosomal protein S15-like mRNA, complete cds Length = 490 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| |||||||||||| || ||||| Sbjct: 42 gaagaagcggaccttccgcaagttcacctaccgcggcgtagacctcga 89
>gb|BT013278.1| Lycopersicon esculentum clone 134857F, mRNA sequence Length = 646 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 235 cccgcagaaggttcaagaggggtctcaagaggaagcccatggcgcttgtcaagaagctgc 294 |||| |||||| || |||| ||| | ||||||||||| ||||| || |||||||||||| Sbjct: 188 cccgtagaaggatcgagagaggtttgaagaggaagccaatggcactgatcaagaagctgc 247 Query: 295 gcaaggcgaaa 305 | ||||||||| Sbjct: 248 ggaaggcgaaa 258
>ref|NM_120987.2| Arabidopsis thaliana structural constituent of ribosome AT5G09500 mRNA, complete cds Length = 652 Score = 52.0 bits (26), Expect = 0.001 Identities = 95/118 (80%) Strand = Plus / Plus Query: 283 tcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtgagaagccagagccagtga 342 ||||||| ||||| || ||||||| || || || ||||| |||||||||| |||||| Sbjct: 253 tcaagaaactgcggaaagcgaaaattgaagcaccagctggagagaagccagcagcagtga 312 Query: 343 ggacacatctccgtaacatgatcattgtccctgagatgattggcagccttatcggtgt 400 | || || || | |||||||||||||| ||||| |||||||| ||| | |||||||| Sbjct: 313 gaacccacctaaggaacatgatcattgtgcctgaaatgattggaagcgtcatcggtgt 370
>ref|NM_123730.1| Arabidopsis thaliana structural constituent of ribosome AT5G43640 mRNA, complete cds Length = 450 Score = 52.0 bits (26), Expect = 0.001 Identities = 77/94 (81%) Strand = Plus / Plus Query: 292 tgcgcaaggcgaaaaaagatgctcctgctggtgagaagccagagccagtgaggacacatc 351 ||||||| ||||||| || || || |||||||||||||||| ||||||| ||||| Sbjct: 191 tgcgcaaagcgaaaatggaggcaccagctggtgagaagccagcatcagtgagaacacact 250 Query: 352 tccgtaacatgatcattgtccctgagatgattgg 385 | | |||||||||||||| ||||| |||||||| Sbjct: 251 tgaggaacatgatcattgtgcctgaaatgattgg 284
>ref|XM_515900.1| PREDICTED: Pan troglodytes similar to ribosomal protein S15; rat insulinoma gene (LOC459733), mRNA Length = 504 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtgga 175 ||||||| |||| ||||||||||||| | ||||||||||||| Sbjct: 28 gaagaagcggaccttccgcaagttcacccaccgcggcgtgga 69
>gb|BT010135.1| Arabidopsis thaliana At5g09500 gene, complete cds Length = 453 Score = 52.0 bits (26), Expect = 0.001 Identities = 95/118 (80%) Strand = Plus / Plus Query: 283 tcaagaagctgcgcaaggcgaaaaaagatgctcctgctggtgagaagccagagccagtga 342 ||||||| ||||| || ||||||| || || || ||||| |||||||||| |||||| Sbjct: 185 tcaagaaactgcggaaagcgaaaattgaagcaccagctggagagaagccagcagcagtga 244 Query: 343 ggacacatctccgtaacatgatcattgtccctgagatgattggcagccttatcggtgt 400 | || || || | |||||||||||||| ||||| |||||||| ||| | |||||||| Sbjct: 245 gaacccacctaaggaacatgatcattgtgcctgaaatgattggaagcgtcatcggtgt 302
>emb|CR857831.1| Pongo pygmaeus mRNA; cDNA DKFZp459D1354 (from clone DKFZp459D1354) Length = 3984 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtgga 175 ||||||| |||| |||| |||||||| ||||||||||||||| Sbjct: 696 gaagaagcggaccttccccaagttcacctaccgcggcgtgga 655
>gb|AY086958.1| Arabidopsis thaliana clone 29963 mRNA, complete sequence Length = 682 Score = 52.0 bits (26), Expect = 0.001 Identities = 110/138 (79%) Strand = Plus / Plus Query: 263 gaggaagcccatggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctgg 322 ||||||||| ||||| || ||||||| ||||||| |||||| |||||| || ||||| Sbjct: 233 gaggaagcctatggctctcatcaagaaattgcgcaaagcgaaactagatgcaccagctgg 292 Query: 323 tgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatgat 382 ||||||||| || |||||| || ||||| | |||||| | ||| | ||||| ||||| Sbjct: 293 tgagaagcccgaagtagtgagaacccatctaaggaacatggtgattatgcctgaaatgat 352 Query: 383 tggcagccttatcggtgt 400 ||| ||| |||| ||||| Sbjct: 353 tggaagcattattggtgt 370
>ref|NM_001035879.1| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural constituent of ribosome AT1G04270 (RPS15) transcript variant AT1G04270.2 mRNA, complete cds Length = 795 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 321 ggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatg 380 |||||||||||||| |||||||| || || | | ||||||||||| |||||||| ||| Sbjct: 317 ggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatg 376 Query: 381 attgg 385 ||||| Sbjct: 377 attgg 381
>ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural constituent of ribosome AT1G04270 (RPS15) transcript variant AT1G04270.1 mRNA, complete cds Length = 798 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 321 ggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatg 380 |||||||||||||| |||||||| || || | | ||||||||||| |||||||| ||| Sbjct: 320 ggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatg 379 Query: 381 attgg 385 ||||| Sbjct: 380 attgg 384
>ref|NM_120986.2| Arabidopsis thaliana structural constituent of ribosome AT5G09490 mRNA, complete cds Length = 681 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 263 gaggaagcccatggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctgg 322 ||||||||| ||||| || ||||||| ||||||| |||||| |||||| || ||||| Sbjct: 233 gaggaagcctatggctctcatcaagaaattgcgcaaagcgaaactagatgcaccagctgg 292 Query: 323 tgagaagcc 331 ||||||||| Sbjct: 293 tgagaagcc 301
>ref|XM_516537.1| PREDICTED: Pan troglodytes similar to voltage-gated calcium channel alpha(2)delta-3 subunit (LOC460455), mRNA Length = 1210 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 147 ttccgcaagttcagctaccgcggcgtgga 175 ||||||||||||| ||||||||||||||| Sbjct: 34 ttccgcaagttcacctaccgcggcgtgga 62
>gb|DQ446937.1| Arabidopsis thaliana clone pENTR221-At5g09490 40S ribosomal protein S15 (At5g09490) mRNA, complete cds Length = 459 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 263 gaggaagcccatggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcctgctgg 322 ||||||||| ||||| || ||||||| ||||||| |||||| |||||| || ||||| Sbjct: 171 gaggaagcctatggctctcatcaagaaattgcgcaaagcgaaactagatgcaccagctgg 230 Query: 323 tgagaagcc 331 ||||||||| Sbjct: 231 tgagaagcc 239
>emb|Z23162.1|ATRBPS15B A.thaliana H1flk-3 gene, 3' end, and ribosomal protein S15 gene, complete CDS Length = 2780 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 321 ggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatg 380 |||||||||||||| |||||||| || || | | ||||||||||| |||||||| ||| Sbjct: 1998 ggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatg 2057 Query: 381 attgg 385 ||||| Sbjct: 2058 attgg 2062
>emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRNA, complete CDS Length = 668 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 321 ggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatg 380 |||||||||||||| |||||||| || || | | ||||||||||| |||||||| ||| Sbjct: 258 ggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatg 317 Query: 381 attgg 385 ||||| Sbjct: 318 attgg 322
>emb|X91962.1|AT40SRS15 A.thaliana mRNA for 40S ribosomal protein S15 Length = 694 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 321 ggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatg 380 |||||||||||||| |||||||| || || | | ||||||||||| ||||||| ||| Sbjct: 290 ggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcctccctgaaatg 349 Query: 381 attggcagc 389 ||||||||| Sbjct: 350 attggcagc 358
>emb|CR937046.1|PT147K15 Pan troglodytes chromosome 11 BAC PTB-147K15, complete sequence Length = 197298 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 147 ttccgcaagttcagctaccgcggcgtgga 175 ||||||||||||| ||||||||||||||| Sbjct: 185719 ttccgcaagttcacctaccgcggcgtgga 185747
>gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds Length = 459 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 321 ggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatg 380 |||||||||||||| |||||||| || || | | ||||||||||| |||||||| ||| Sbjct: 229 ggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatg 288 Query: 381 attgg 385 ||||| Sbjct: 289 attgg 293
>gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds Length = 729 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 321 ggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatg 380 |||||||||||||| |||||||| || || | | ||||||||||| |||||||| ||| Sbjct: 320 ggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatg 379 Query: 381 attgg 385 ||||| Sbjct: 380 attgg 384
>emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL20ZD06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 695 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 321 ggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatg 380 |||||||||||||| |||||||| || || | | ||||||||||| |||||||| ||| Sbjct: 284 ggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatg 343 Query: 381 attgg 385 ||||| Sbjct: 344 attgg 348
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 107527 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 321 ggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgagatg 380 |||||||||||||| |||||||| || || | | ||||||||||| |||||||| ||| Sbjct: 91122 ggtgagaagccagaaccagtgagaacccacttgaggaacatgatcatcgtccctgaaatg 91181 Query: 381 attgg 385 ||||| Sbjct: 91182 attgg 91186
>gb|AF481061.1| Aplysia californica 40S ribosomal protein S15 mRNA, partial cds Length = 243 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Plus Query: 351 ctccgtaacatgatcattgtccctgagatgattggc 386 |||||| |||||||||||||||| || ||||||||| Sbjct: 43 ctccgtgacatgatcattgtcccagaaatgattggc 78
>emb|AL357055.18| Human DNA sequence from clone RP11-389O22 on chromosome 1 Contains the 3' end of a novel gene, the 5' end of a novel gene, the LRIG2 gene for leucine-rich repeats and immunoglobulin-like domains 2, a ring finger protein 12 (RNF12) pseudogene, a ribosomal protein S19 (RPS19) pseudogene, a ribosomal protein S15 (RPS15) pseudogene and a CpG island, complete sequence Length = 188812 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| |||| ||||||||||||| || | |||||||||| ||||| Sbjct: 171239 gaagaagcggaccttccgcaagttcacctgctgcggcgtggacctcga 171286
>ref|NG_004114.1| Rattus norvegicus ribosomal protein S15 pseudogene (LOC414358) on chromosome 7 Length = 684 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| | || ||||||||||||| |||||| |||||||| ||||| Sbjct: 139 gaagaagcgaaccttccgcaagttcacctaccgtggcgtggacctcga 186
>dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9D7 Length = 60476 Score = 48.1 bits (24), Expect = 0.022 Identities = 57/68 (83%) Strand = Plus / Plus Query: 318 gctggtgagaagccagagccagtgaggacacatctccgtaacatgatcattgtccctgag 377 |||||||||||||||| ||||||| ||||| | | |||||||||||||| ||||| Sbjct: 56045 gctggtgagaagccagcatcagtgagaacacacttgaggaacatgatcattgtgcctgaa 56104 Query: 378 atgattgg 385 |||||||| Sbjct: 56105 atgattgg 56112
>gb|U09759.1|HSU09759 Human protein kinase (JNK2) mRNA, complete cds Length = 1873 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Minus Query: 142 ggacgttccgcaagttcagctaccgcggcgtggatctcga 181 |||| |||||||| |||| ||||||||||||||| ||||| Sbjct: 95 ggaccttccgcaacttcacctaccgcggcgtggacctcga 56
>gb|AY440940.1| Armigeres subalbatus ASAP ID: 39525 cytosolic small ribosomal subunit S15 mRNA sequence Length = 665 Score = 46.1 bits (23), Expect = 0.087 Identities = 36/41 (87%) Strand = Plus / Plus Query: 264 aggaagcccatggcgcttgtcaagaagctgcgcaaggcgaa 304 |||||||| ||||| || |||||||||||||| ||||| || Sbjct: 268 aggaagccgatggccctcgtcaagaagctgcgtaaggcsaa 308
>emb|Z23267.1|PAAS1GNA P.anserina AS1 gene, complete CDS Length = 2273 Score = 46.1 bits (23), Expect = 0.087 Identities = 44/51 (86%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcgatgc 184 ||||||||| || |||||||||||| |||||||| || ||||||||||| Sbjct: 958 gaagaagagaaccttccgcaagttctcttaccgcggtgtcgatctcgatgc 1008
>emb|AJ783762.1| Papilio dardanus mRNA for ribosomal protein S15e (rpS15e gene) Length = 444 Score = 46.1 bits (23), Expect = 0.087 Identities = 35/39 (89%) Strand = Plus / Plus Query: 348 catctccgtaacatgatcattgtccctgagatgattggc 386 ||||| ||||| ||||||||||| ||||||||| ||||| Sbjct: 241 catctgcgtaatatgatcattgtacctgagatggttggc 279
>ref|NM_017151.2| Rattus norvegicus ribosomal protein S15 (Rps15), mRNA Length = 508 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 147 ttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||||||||| |||||| |||||||| ||||| Sbjct: 55 ttccgcaagttcacctaccgtggcgtggacctcga 89
>gb|M19393.1|RATRIG Rat insulinoma rig mRNA, encoding a putative DNA-binding protein Length = 487 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 147 ttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||||||||| |||||| |||||||| ||||| Sbjct: 55 ttccgcaagttcacctaccgtggcgtggacctcga 89
>dbj|D11388.1|RATRIBS15 Rattus norvegicus gene for ribosomal protein S15, exon 1, 2, 3, 4, complete cds Length = 1960 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 147 ttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||||||||| |||||| |||||||| ||||| Sbjct: 663 ttccgcaagttcacctaccgtggcgtggacctcga 697
>ref|NM_103107.1| Arabidopsis thaliana structural constituent of ribosome AT1G33850 mRNA, complete cds Length = 213 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 174 gatctcgatgccctccttgacatgtccaccgacgaccttgtc 215 ||||||||||| || || |||||||||||||| || |||||| Sbjct: 73 gatctcgatgcgcttctcgacatgtccaccgaagatcttgtc 114
>gb|AY741683.1| Aedes aegypti 40S ribosomal protein S15 (40sRpS15) mRNA, complete cds Length = 664 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 264 aggaagcccatggcgcttgtcaagaagctgcgcaaggc 301 ||||||||| |||| || ||||||||||||||||||| Sbjct: 260 aggaagcccgtggccctcatcaagaagctgcgcaaggc 297
>gb|AY432933.1| Aedes aegypti ASAP ID: 34337 cytosolic small ribosomal subunit S15 mRNA sequence Length = 621 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 264 aggaagcccatggcgcttgtcaagaagctgcgcaaggc 301 ||||||||| |||| || ||||||||||||||||||| Sbjct: 247 aggaagcccgtggccctcatcaagaagctgcgcaaggc 284
>emb|AM048967.1| Scarabaeus laticollis mRNA for ribosomal protein S15e (rpS15e gene) Length = 444 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 aagcccatggcgcttgtcaagaagctgcgcaaggcgaa 304 ||||| ||||| || || |||||||||||||||||||| Sbjct: 160 aagccgatggccctggtgaagaagctgcgcaaggcgaa 197
>gb|DQ446316.1| Arabidopsis thaliana clone pENTR221-At1g33850 40S ribosomal protein S15 (At1g33850) mRNA, complete cds Length = 213 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 174 gatctcgatgccctccttgacatgtccaccgacgaccttgtc 215 ||||||||||| || || |||||||||||||| || |||||| Sbjct: 73 gatctcgatgcgcttctcgacatgtccaccgaagatcttgtc 114
>gb|AC022288.5|AC022288 Arabidopsis thaliana chromosome 1 BAC T3M13 genomic sequence, complete sequence Length = 80309 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 174 gatctcgatgccctccttgacatgtccaccgacgaccttgtc 215 ||||||||||| || || |||||||||||||| || |||||| Sbjct: 62681 gatctcgatgcgcttctcgacatgtccaccgaagatcttgtc 62722
>gb|AC010164.2|AC010164 Arabidopsis thaliana chromosome I BAC F14M2 genomic sequence, complete sequence Length = 103443 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 174 gatctcgatgccctccttgacatgtccaccgacgaccttgtc 215 ||||||||||| || || |||||||||||||| || |||||| Sbjct: 8842 gatctcgatgcgcttctcgacatgtccaccgaagatcttgtc 8883
>dbj|AB180414.1| Plutella xylostella mRNA for Ribosomal protein S15, complete cds Length = 514 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 267 aagcccatggcgcttgtcaagaagctgcgc 296 |||||||||||||| || |||||||||||| Sbjct: 167 aagcccatggcgctggtgaagaagctgcgc 196 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 aacatgatcattgtccctgagatg 380 ||||||||||||||||| |||||| Sbjct: 257 aacatgatcattgtccccgagatg 280
>ref|XM_514280.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 1810063B05 (LOC457829), mRNA Length = 1989 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 gcaagttcagctaccgcggcgtgga 175 ||||||||| ||||||||||||||| Sbjct: 1064 gcaagttcacctaccgcggcgtgga 1040
>ref|XR_003198.1| PREDICTED: Mus musculus hypothetical LOC544741 (LOC544741), mRNA Length = 612 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccg 166 ||||||| |||| ||||||||||||| |||||| Sbjct: 45 gaagaagcggaccttccgcaagttcacctaccg 77
>gb|BC054858.1| Homo sapiens cDNA clone IMAGE:6103129, partial cds Length = 1210 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 ttccgcaagttcagctaccgcggcgtgga 175 ||||||||||||| ||||||||| ||||| Sbjct: 187 ttccgcaagttcacctaccgcggtgtgga 159
>ref|XM_968046.1| PREDICTED: Tribolium castaneum similar to CG8332-PA, isoform A (LOC661916), mRNA Length = 598 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 273 atggcgcttgtcaagaagctgcgcaaggcgaaaaaagatgctcct 317 ||||| || ||||| || || ||||||||||||||||| |||||| Sbjct: 280 atggctctggtcaaaaaactccgcaaggcgaaaaaagaagctcct 324
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 aagttcagctaccgcggcgtg 173 ||||||||||||||||||||| Sbjct: 4752648 aagttcagctaccgcggcgtg 4752668
>gb|DQ413229.1| Acyrthosiphon pisum isolate WHAP0343 putative ribosomal protein S15e mRNA, complete cds Length = 453 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 348 catctccgtaacatgatcattgtccctgagatgattggcag 388 ||||| || |||||||||||||| ||||| ||| ||||||| Sbjct: 250 catctacgcaacatgatcattgttcctgaaatggttggcag 290
>gb|AC016304.8| Homo sapiens, clone RP11-25H11, complete sequence Length = 164336 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtgg 174 ||||||| |||| ||||||||||||| |||||||| |||| Sbjct: 113940 gaagaagcggaccttccgcaagttcacttaccgcggtgtgg 113980
>gb|BC011998.1|BC011998 Homo sapiens, clone IMAGE:4479080, mRNA, partial cds Length = 1618 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 ttccgcaagttcagctaccgcggcgtgga 175 ||||||||||||| ||||||||| ||||| Sbjct: 603 ttccgcaagttcacctaccgcggtgtgga 575
>gb|AC008446.5| Homo sapiens chromosome 5 clone CTC-340A15, complete sequence Length = 152232 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 ttccgcaagttcagctaccgcggcgtgga 175 ||||||||||||| ||||||||| ||||| Sbjct: 48279 ttccgcaagttcacctaccgcggtgtgga 48251
>gb|AF400212.1| Spodoptera frugiperda ribosomal protein S15 mRNA, complete cds Length = 546 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 357 aacatgatcattgtccctgagatgattgg 385 ||||||||||||||||| |||||| |||| Sbjct: 280 aacatgatcattgtccccgagatggttgg 308
>gb|AC116614.6| Homo sapiens BAC clone CTD-2029L3 from 2, complete sequence Length = 129814 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 321 ggtgagaagccagagccagtgagga 345 ||||||||||||||||||| ||||| Sbjct: 26393 ggtgagaagccagagccagagagga 26369
>emb|AL589661.21| Mouse DNA sequence from clone RP23-58B7 on chromosome 15, complete sequence Length = 241432 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccg 166 ||||||| |||| ||||||||||||| |||||| Sbjct: 200809 gaagaagcggaccttccgcaagttcacctaccg 200841
>gb|L01470.1|RHBRTXAB Bradyrhizobium japonicum aminotransferase and dihydrorhizobitoxine synthase (rtxA) gene, complete cds Length = 2948 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 gcaagttcagctaccgcggcg 171 ||||||||||||||||||||| Sbjct: 2229 gcaagttcagctaccgcggcg 2249
>dbj|AB062279.1| Bradyrhizobium elkanii genes for FixG, FixH, FixI, FixS, Disrupted noeE, NodP, NodQ, RtxA, RtxC, amidotransferase subunit, hypothetical protein, glutamine synthetase, transposase, transposase-associated ATP-binding protein, partial and complete cds Length = 28401 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 gcaagttcagctaccgcggcg 171 ||||||||||||||||||||| Sbjct: 15077 gcaagttcagctaccgcggcg 15097
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 acatgatcattgtccctgagatgattgg 385 |||||||||| ||||| ||||||||||| Sbjct: 1124633 acatgatcatcgtccccgagatgattgg 1124660
>gb|AY738582.1| Giardia intestinalis histone acetyltransferase Gcn5 gene, complete cds Length = 3818 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 342 aggacacatctccgtaacatgatcattgtccctgagatgattgg 385 ||||| |||||||| |||||||||| |||| ||||||||||| Sbjct: 3343 aggactcatctccgcgacatgatcatcttcccagagatgattgg 3386
>gb|AC152062.6| Mus musculus BAC clone RP23-341K9 from chromosome 10, complete sequence Length = 240781 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| | || ||||||||||||| |||||| ||||| || ||||| Sbjct: 144327 gaagaagcgcaccttccgcaagttcacctaccgtggcgtagacctcga 144280
>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230137 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 358 acatgatcattgtccctgagatgattggcagc 389 ||||||||||| | ||||||||| |||||||| Sbjct: 126207 acatgatcattctgcctgagatggttggcagc 126238
>gb|BC010763.1| Mus musculus ribosomal protein S15, mRNA (cDNA clone MGC:18520 IMAGE:4234356), complete cds Length = 524 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| | || ||||||||||||| |||||| ||||| || ||||| Sbjct: 37 gaagaagcgcaccttccgcaagttcacctaccgtggcgtagacctcga 84
>ref|NM_009091.1| Mus musculus ribosomal protein S15 (Rps15), mRNA Length = 500 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| | || ||||||||||||| |||||| ||||| || ||||| Sbjct: 51 gaagaagcgcaccttccgcaagttcacctaccgtggcgtagacctcga 98
>ref|XM_653212.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0700.2), mRNA Length = 2265 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 agatgattggcagccttatcggtg 399 |||| ||||||||||||||||||| Sbjct: 1631 agataattggcagccttatcggtg 1654
>ref|XM_571678.1| Cryptococcus neoformans var. neoformans JEC21 40s ribosomal protein s15 (CNF03840) partial mRNA Length = 740 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 acatgatcattgtccctgagatgattgg 385 |||||||||| ||||| ||||||||||| Sbjct: 305 acatgatcatcgtccccgagatgattgg 332
>gb|AC126042.3| Mus musculus BAC clone RP24-303J10 from chromosome 18, complete sequence Length = 173064 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 tgagaagccagagccagtgaggac 346 ||||||||||||| |||||||||| Sbjct: 52465 tgagaagccagagtcagtgaggac 52488
>gb|AC124367.4| Mus musculus BAC clone RP24-545D20 from chromosome 18, complete sequence Length = 169912 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 tgagaagccagagccagtgaggac 346 ||||||||||||| |||||||||| Sbjct: 11717 tgagaagccagagtcagtgaggac 11694
>ref|XM_763459.1| Giardia lamblia ATCC 50803 ribosomal protein S15 (GLP_191_11250_10813) partial mRNA Length = 438 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 342 aggacacatctccgtaacatgatcattgtccctgagatgattgg 385 ||||| |||||||| |||||||||| |||| ||||||||||| Sbjct: 229 aggactcatctccgcgacatgatcatcttcccagagatgattgg 272
>gb|AF145025.1| Homo sapiens insulinoma protein mRNA, complete cds Length = 478 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| | || ||||||||||||| |||||| ||||| || ||||| Sbjct: 43 gaagaagcgcaccttccgcaagttcacctaccgtggcgtagacctcga 90
>emb|AJ251829.1|SSC251829 Sus scrofa MHC class I SLA genomic region, haplotype H01, clone BAC 207G8 Length = 152211 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 tcctgctggtgagaagccagagcc 337 |||||||||| ||||||||||||| Sbjct: 23151 tcctgctggtcagaagccagagcc 23128
>dbj|AB158487.1| Sus scrofa PPP1R11, ZNRD1, RNF39, TRIM10, TRIM31, MOG, TRIM15, KRAB, TRIM40 genes, complete cds Length = 143480 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 tcctgctggtgagaagccagagcc 337 |||||||||| ||||||||||||| Sbjct: 111502 tcctgctggtcagaagccagagcc 111479
>dbj|AK138531.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330052C19 product:mitogen-activated protein kinase 4, full insert sequence Length = 2723 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 tgagaagccagagccagtgaggac 346 ||||||||||||| |||||||||| Sbjct: 2611 tgagaagccagagtcagtgaggac 2588
>dbj|AK135319.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720473N03 product:ribosomal protein S15, full insert sequence Length = 431 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| | || ||||||||||||| |||||| ||||| || ||||| Sbjct: 45 gaagaagcgcaccttccgcaagttcacctaccgtggcgtagacctcga 92
>dbj|AK146147.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730022O16 product:ribosomal protein S15, full insert sequence Length = 493 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| | || ||||||||||||| |||||| ||||| || ||||| Sbjct: 43 gaagaagcgcaccttccgcaagttcacctaccgtggcgtagagctcga 90
>dbj|AK162916.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330033D12 product:mitogen-activated protein kinase 4, full insert sequence Length = 2723 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 tgagaagccagagccagtgaggac 346 ||||||||||||| |||||||||| Sbjct: 2611 tgagaagccagagtcagtgaggac 2588
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 caagaagctgcgcaaggcga 303 |||||||||||||||||||| Sbjct: 574690 caagaagctgcgcaaggcga 574709
>gb|BC094409.1| Mus musculus ribosomal protein S15, mRNA (cDNA clone MGC:107023 IMAGE:1179896), complete cds Length = 520 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| | || ||||||||||||| |||||| ||||| || ||||| Sbjct: 36 gaagaagcgcaccttccgcaagttcacctaccgtggcgtagacctcga 83
>ref|NM_209389.1| Eremothecium gossypii ADL060Wp (ADL060W), mRNA Length = 1023 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 caagaagctgcgcaaggcga 303 |||||||||||||||||||| Sbjct: 117 caagaagctgcgcaaggcga 136
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 caagaagctgcgcaaggcga 303 |||||||||||||||||||| Sbjct: 401074 caagaagctgcgcaaggcga 401055
>gb|AC140229.3| Mus musculus BAC clone RP24-488O12 from 10, complete sequence Length = 156601 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| | || ||||||||||||| |||||| ||||| || ||||| Sbjct: 142945 gaagaagcgcaccttccgcaagttcacctaccgtggcgtagacctcga 142992
>gb|M33330.1|MUSRIGA Mouse insulinoma (rig) mRNA, complete cds Length = 500 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gaagaagaggacgttccgcaagttcagctaccgcggcgtggatctcga 181 ||||||| | || ||||||||||||| |||||| ||||| || ||||| Sbjct: 51 gaagaagcgcaccttccgcaagttcacctaccgtggcgtagacctcga 98 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,653,772 Number of Sequences: 3902068 Number of extensions: 2653772 Number of successful extensions: 47341 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46918 Number of HSP's gapped (non-prelim): 387 length of query: 400 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 378 effective length of database: 17,147,199,772 effective search space: 6481641513816 effective search space used: 6481641513816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)