ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast56e02 |
|---|---|
| Clone Library Name | barley_pub |
>TINY_ARATH (Q39127) Transcriptional factor TINY| Length = 218 Score = 46.6 bits (109), Expect = 3e-05 Identities = 19/21 (90%), Positives = 19/21 (90%) Frame = +1 Query: 376 GKHPVYRGVRMRAWGKWVSEI 438 GKHPVYRGVR R WGKWVSEI Sbjct: 31 GKHPVYRGVRKRNWGKWVSEI 51
>DRE1B_ARATH (P93835) Dehydration-responsive element-binding protein 1B (DREB1B| protein) (C-repeat-binding factor 1) (C-repeat/dehydration-responsive element-binding factor 1) (CRT/DRE-binding factor 1) Length = 213 Score = 37.4 bits (85), Expect = 0.017 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = +1 Query: 379 KHPVYRGVRMRAWGKWVSEI 438 +HP+YRGVR R GKWVSE+ Sbjct: 44 RHPIYRGVRQRNSGKWVSEV 63
>DRE2B_ARATH (O82133) Dehydration-responsive element-binding protein 2B (DREB2B| protein) Length = 330 Score = 36.6 bits (83), Expect = 0.028 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +1 Query: 373 DGKHPVYRGVRMRAWGKWVSEI 438 D H +RGVR R WGKWV+EI Sbjct: 72 DNSHCSFRGVRQRIWGKWVAEI 93
>DRE1D_ARATH (Q9FJ93) Dehydration-responsive element-binding protein 1D (DREB1D| protein) (C-repeat-binding factor 4) (C-repeat/dehydration-responsive element-binding factor 4) (CRT/DRE-binding factor 4) Length = 224 Score = 35.4 bits (80), Expect = 0.063 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +1 Query: 379 KHPVYRGVRMRAWGKWVSEI 438 +HP+YRGVR R GKWV E+ Sbjct: 50 RHPIYRGVRQRNSGKWVCEV 69
>DRE2F_ARATH (Q9SVX5) Dehydration-responsive element-binding protein 2F (DREB2F| protein) Length = 277 Score = 35.0 bits (79), Expect = 0.083 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 YRGVR R WGKWV+EI Sbjct: 28 YRGVRQRTWGKWVAEI 43
>DRE1C_ARATH (Q9SYS6) Dehydration-responsive element-binding protein 1C (DREB1C| protein) (C-repeat-binding factor 2) (C-repeat/dehydration-responsive element-binding factor 2) (CRT/DRE-binding factor 2) Length = 216 Score = 35.0 bits (79), Expect = 0.083 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +1 Query: 379 KHPVYRGVRMRAWGKWVSEI 438 +HP+YRGVR R GKWV E+ Sbjct: 47 RHPIYRGVRQRNSGKWVCEL 66
>DRE1A_ARATH (Q9M0L0) Dehydration-responsive element-binding protein 1A (DREB1A| protein) (C-repeat-binding factor 3) (C-repeat/dehydration-responsive element-binding factor 3) (CRT/DRE-binding factor 3) Length = 216 Score = 35.0 bits (79), Expect = 0.083 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +1 Query: 379 KHPVYRGVRMRAWGKWVSEI 438 +HP+YRGVR R GKWV E+ Sbjct: 47 RHPIYRGVRRRNSGKWVCEV 66
>DRE2C_ARATH (Q8LFR2) Dehydration-responsive element-binding protein 2C (DREB2C| protein) Length = 341 Score = 34.7 bits (78), Expect = 0.11 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 YRGVR R WGKWV+EI Sbjct: 72 YRGVRQRRWGKWVAEI 87
>DRE2D_ARATH (Q9LQZ2) Putative dehydration-responsive element-binding protein 2D| (DREB2D protein) Length = 206 Score = 34.3 bits (77), Expect = 0.14 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +1 Query: 373 DGKHPVYRGVRMRAWGKWVSEI 438 D Y+GVR R WGKWV+EI Sbjct: 36 DNASCTYKGVRQRTWGKWVAEI 57
>AP23_ARATH (P42736) AP2 domain transcription factor RAP2.3 (Related to AP2| protein 3) (Cadmium-induced protein AS30) Length = 248 Score = 33.9 bits (76), Expect = 0.18 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = +1 Query: 388 VYRGVRMRAWGKWVSEI 438 VYRG+R R WGKW +EI Sbjct: 78 VYRGIRKRPWGKWAAEI 94
>DRE2E_ARATH (O80917) Dehydration-responsive element-binding protein 2E (DREB2E| protein) Length = 244 Score = 33.5 bits (75), Expect = 0.24 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 +RGVR R WGKWV+EI Sbjct: 70 FRGVRQRVWGKWVAEI 85
>DRE2G_ARATH (P61827) Dehydration-responsive element-binding protein 2G (DREB2G| protein) Length = 307 Score = 33.5 bits (75), Expect = 0.24 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 +RGVR R WGKWV+EI Sbjct: 34 FRGVRQRTWGKWVAEI 49
>DRE2A_ARATH (O82132) Dehydration-responsive element-binding protein 2A (DREB2A| protein) Length = 335 Score = 33.1 bits (74), Expect = 0.31 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 +RGVR R WGKWV+EI Sbjct: 79 FRGVRQRIWGKWVAEI 94
>DRE2H_ARATH (Q9SIZ0) Putative dehydration-responsive element-binding protein 2H| (DREB2H protein) Length = 164 Score = 32.7 bits (73), Expect = 0.41 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 Y GVR R WGKWV+EI Sbjct: 74 YTGVRQRTWGKWVAEI 89
>DRE1E_ARATH (Q9SGJ6) Dehydration-responsive element-binding protein 1E (DREB1E| protein) Length = 181 Score = 32.7 bits (73), Expect = 0.41 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +1 Query: 379 KHPVYRGVRMRAWGKWVSEI 438 +HP+YRGVR R KWV E+ Sbjct: 26 RHPIYRGVRRRDGDKWVCEV 45
>DRE1F_ARATH (Q9LN86) Dehydration-responsive element-binding protein 1F (DREB1F| protein) Length = 209 Score = 32.7 bits (73), Expect = 0.41 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +1 Query: 379 KHPVYRGVRMRAWGKWVSEI 438 +HPVYRG+R R KWV E+ Sbjct: 26 RHPVYRGIRRRNGDKWVCEV 45
>ERF1A_ARATH (O80337) Ethylene-responsive transcription factor 1A| (Ethylene-responsive element-binding factor 1A) (EREBP-1A) (AtERF1) Length = 268 Score = 32.0 bits (71), Expect = 0.70 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +1 Query: 367 SSDGKHPVYRGVRMRAWGKWVSEI 438 ++ GKH YRGVR R WGK+ +EI Sbjct: 142 AAKGKH--YRGVRQRPWGKFAAEI 163
>PZ02_LUPPO (P16146) Protein PPLZ02| Length = 164 Score = 31.6 bits (70), Expect = 0.91 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 YRG R R WG WVSEI Sbjct: 8 YRGFRQRHWGSWVSEI 23
>ERF6_ARATH (Q8VZ91) Ethylene-responsive transcription factor 6| (Ethylene-responsive element-binding factor 6) (EREBP-6) (AtERF6) Length = 282 Score = 31.2 bits (69), Expect = 1.2 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 YRGVRMR WGK+ +EI Sbjct: 137 YRGVRMRPWGKFAAEI 152
>ERF7_ARATH (Q9LDE4) Ethylene-responsive transcription factor 7| (Ethylene-responsive element-binding factor 7) (EREBP-7) (AtERF7) Length = 244 Score = 31.2 bits (69), Expect = 1.2 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +1 Query: 379 KHPVYRGVRMRAWGKWVSEI 438 K P YRGVR R WG++ +EI Sbjct: 23 KEPRYRGVRKRPWGRFAAEI 42
>ERF2_NICSY (Q9LW50) Ethylene-responsive transcription factor 2| (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) Length = 237 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +1 Query: 376 GKHPVYRGVRMRAWGKWVSEI 438 G+H YRGVR R WGK+ +EI Sbjct: 100 GRH--YRGVRQRPWGKFAAEI 118
>ERF2_TOBAC (Q40479) Ethylene-responsive transcription factor 2| (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) Length = 233 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +1 Query: 376 GKHPVYRGVRMRAWGKWVSEI 438 G+H YRGVR R WGK+ +EI Sbjct: 96 GRH--YRGVRQRPWGKFAAEI 114
>ERF1_LYCES (Q84XB3) Ethylene-responsive transcription factor 1| (Ethylene-responsive element-binding factor 1) (EREBP-1) (ERF1-like protein) (LeERF1) Length = 244 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +1 Query: 376 GKHPVYRGVRMRAWGKWVSEI 438 G+H YRGVR R WGK+ +EI Sbjct: 104 GRH--YRGVRQRPWGKFAAEI 122
>PTI6_LYCES (O04682) Pathogenesis-related genes transcriptional activator PTI6| (PTO-interacting protein 6) Length = 248 Score = 30.4 bits (67), Expect = 2.0 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 +RGVR R WG+W +EI Sbjct: 98 FRGVRQRPWGRWAAEI 113
>ERF1_TOBAC (Q40476) Ethylene-responsive transcription factor 1| (Ethylene-responsive element-binding factor 1) (EREBP-1) (NtERF1) Length = 236 Score = 30.0 bits (66), Expect = 2.7 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +1 Query: 376 GKHPVYRGVRMRAWGKWVSEI 438 G+H YRGVR R WGK+ +EI Sbjct: 102 GRH--YRGVRRRPWGKFAAEI 120
>ERF11_ARATH (Q9C5I3) Ethylene-responsive transcription factor 11| (Ethylene-responsive element-binding factor 11) (EREBP-11) (AtERF11) Length = 166 Score = 30.0 bits (66), Expect = 2.7 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +1 Query: 364 RSSDGKHPVYRGVRMRAWGKWVSEI 438 ++++G YRGVR R WG++ +EI Sbjct: 11 KTNEGNGVRYRGVRKRPWGRYAAEI 35
>ERF5_NICSY (Q9LW48) Ethylene-responsive transcription factor 5| (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) Length = 282 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 370 SDGKHPVYRGVRMRAWGKWVSEI 438 ++ KH YRGVR R WGK+ +EI Sbjct: 133 TEKKH--YRGVRQRPWGKFAAEI 153
>ERF5_TOBAC (Q40478) Ethylene-responsive transcription factor 5| (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) Length = 291 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 370 SDGKHPVYRGVRMRAWGKWVSEI 438 ++ KH YRGVR R WGK+ +EI Sbjct: 140 TEKKH--YRGVRQRPWGKFAAEI 160
>PTI5_LYCES (O04681) Pathogenesis-related genes transcriptional activator PTI5| (PTO-interacting protein 5) Length = 161 Score = 29.3 bits (64), Expect = 4.5 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 YRGVR R WGK+ +EI Sbjct: 59 YRGVRRRPWGKYAAEI 74
>ERF5_ARATH (O80341) Ethylene-responsive transcription factor 5| (Ethylene-responsive element-binding factor 5) (EREBP-5) (AtERF5) Length = 300 Score = 29.3 bits (64), Expect = 4.5 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 YRGVR R WGK+ +EI Sbjct: 156 YRGVRQRPWGKFAAEI 171
>ERF1B_ARATH (Q8LDC8) Ethylene-responsive transcription factor 1B| (Ethylene-responsive element-binding factor 1B) (EREBP-1B) (AtERF1) Length = 218 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 367 SSDGKHPVYRGVRMRAWGKWVSEI 438 SS YRGVR R WGK+ +EI Sbjct: 74 SSRKSEKSYRGVRRRPWGKFAAEI 97
>ERF14_ARATH (P93822) Ethylene-responsive transcription factor 14| (Ethylene-responsive element-binding factor 14) (EREBP-14) (AtERF14) Length = 133 Score = 29.3 bits (64), Expect = 4.5 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 YRGVR R WGK+ +EI Sbjct: 20 YRGVRRRPWGKYAAEI 35
>ERF2_ARATH (O80338) Ethylene-responsive transcription factor 2| (Ethylene-responsive element-binding factor 2) (EREBP-2) (AtERF2) Length = 243 Score = 29.3 bits (64), Expect = 4.5 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 YRGVR R WGK+ +EI Sbjct: 117 YRGVRQRPWGKFAAEI 132
>ERF13_ARATH (Q8L9K1) Ethylene-responsive transcription factor 13| (Ethylene-responsive element-binding factor 13) (EREBP-13) (AtERF13) Length = 226 Score = 28.9 bits (63), Expect = 5.9 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 YRGVR R WGK+ +EI Sbjct: 92 YRGVRRRPWGKFAAEI 107
>ERF8_ARATH (Q9MAI5) Ethylene-responsive transcription factor 8| (Ethylene-responsive element-binding factor 8) (EREBP-8) (AtERF8) Length = 185 Score = 28.9 bits (63), Expect = 5.9 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +1 Query: 367 SSDGKHPVYRGVRMRAWGKWVSEI 438 S+ K YRGVR R WG++ +EI Sbjct: 23 SNAAKEIRYRGVRKRPWGRYAAEI 46
>ERF15_ARATH (Q8VYM0) Ethylene-responsive transcription factor 15| (Ethylene-responsive element-binding factor 15) (EREBP-15) (AtERF15) Length = 243 Score = 28.9 bits (63), Expect = 5.9 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 391 YRGVRMRAWGKWVSEI 438 YRGVR R WGK+ +EI Sbjct: 86 YRGVRKRPWGKFAAEI 101
>ERF4_TOBAC (Q40477) Ethylene-responsive transcription factor 4| (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) Length = 225 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Frame = +1 Query: 370 SDGKHPV-YRGVRMRAWGKWVSEI 438 +DG V YRGVR R WG++ +EI Sbjct: 19 TDGVKEVHYRGVRKRPWGRYAAEI 42
>ERF4_ARATH (O80340) Ethylene-responsive transcription factor 4| (Ethylene-responsive element-binding factor 4) (Related to APETALA-2 protein 5) (EREBP-4) (AtERF4) Length = 222 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 370 SDGKHPVYRGVRMRAWGKWVSEI 438 ++ K YRGVR R WG++ +EI Sbjct: 18 NNAKEIRYRGVRKRPWGRYAAEI 40 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,193,813 Number of Sequences: 219361 Number of extensions: 315151 Number of successful extensions: 1508 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 1483 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1508 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
