>YMS4_MAIZE (P10580) Hypothetical 29 kDa protein in mitochondrial S-1 DNA (URF|
           4)
          Length = 256

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
 Frame = +1

Query: 277 WDLTSKGAETIPMVKEAAEISTDEESDGV-----VICPPDENTRGCEEVVSGSDHDS 432
           W   S G  TI  V+E A I      +G      V     E   GCEE  SGS+ DS
Sbjct: 172 WGKCSDGDHTIDSVEENATIEYASSKEGSACKEGVDSSCKEEGGGCEEEGSGSEEDS 228

>ZN297_CANFA (Q5TJE2) Zinc finger protein 297|
          Length = 640

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +1

Query: 268 RRRWDLTSKGAET---IPMVKEAAEISTDEESDGVVICPPDENTRGCEEVVSGS 420
           ++ W    +G  +    P+V +  ++  DEE D V+ C  DE+    EE+  GS
Sbjct: 295 QKHWVYVKRGGNSPAPAPLVPQDPDLEEDEEEDLVLTCEDDED----EELGGGS 344

>MPP10_SCHPO (O13910) U3 small nucleolar ribonucleoprotein protein mpp10|
          Length = 598

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +1

Query: 277 WDLTSKGAETIPMVKEAAEIST-DEESDGV-VICPPDENTRGCEEVVSGSDHDS 432
           +D+ +   +T+ + +EA E     +E DG+ ++  PDEN    E+  +G   DS
Sbjct: 165 FDIDNFNKQTLALEEEAVEEGVLGDEDDGIDLLMDPDENMEDSEDESNGPQADS 218


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.127    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,051,343
Number of Sequences: 219361
Number of extensions: 743350
Number of successful extensions: 1929
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1929
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)