ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast56d10 |
|---|---|
| Clone Library Name | barley_pub |
>DCE_PETHY (Q07346) Glutamate decarboxylase (EC 4.1.1.15) (GAD)| Length = 500 Score = 246 bits (627), Expect = 2e-65 Identities = 118/128 (92%), Positives = 125/128 (97%) Frame = +3 Query: 54 TFASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLM 233 TFASRYVR SLPR++MP+NSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPEC+KLM Sbjct: 17 TFASRYVRTSLPRFKMPDNSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLM 76 Query: 234 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLA 413 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPL + ETAVGVGTVGSSEAIMLAGLA Sbjct: 77 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDGETAVGVGTVGSSEAIMLAGLA 136 Query: 414 FKRRWQNR 437 FKR+WQN+ Sbjct: 137 FKRKWQNK 144
>DCE1_ARATH (Q42521) Glutamate decarboxylase 1 (EC 4.1.1.15) (GAD 1)| Length = 502 Score = 245 bits (625), Expect = 4e-65 Identities = 118/128 (92%), Positives = 124/128 (96%) Frame = +3 Query: 54 TFASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLM 233 TFASRYVR SLPR++MPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPEC+KL+ Sbjct: 17 TFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLI 76 Query: 234 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLA 413 M SINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPL E ETAVGVGTVGSSEAIMLAGLA Sbjct: 77 MSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLA 136 Query: 414 FKRRWQNR 437 FKR+WQN+ Sbjct: 137 FKRKWQNK 144
>DCE2_ARATH (Q42472) Glutamate decarboxylase 2 (EC 4.1.1.15) (GAD 2)| Length = 494 Score = 229 bits (585), Expect = 2e-60 Identities = 110/127 (86%), Positives = 120/127 (94%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F SRYVR +LP+Y + ENSIPK+AAYQII DELMLDGNPRLNLASFVTTWMEPEC+KL+M Sbjct: 17 FGSRYVRTTLPKYEIGENSIPKDAAYQIIKDELMLDGNPRLNLASFVTTWMEPECDKLIM 76 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 DSINKNYVDMDEYPVTTELQNRCVN+IA LFNAPL E+ETAVGVGTVGSSEAIMLAGLAF Sbjct: 77 DSINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEESETAVGVGTVGSSEAIMLAGLAF 136 Query: 417 KRRWQNR 437 KR+WQN+ Sbjct: 137 KRKWQNK 143
>DCE_LYCES (P54767) Glutamate decarboxylase (EC 4.1.1.15) (GAD) (ERT D1)| Length = 502 Score = 229 bits (583), Expect = 3e-60 Identities = 106/128 (82%), Positives = 123/128 (96%) Frame = +3 Query: 54 TFASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLM 233 TFASRYV+ LP+++MP+ S+PKEAAYQI+NDELMLDGNPRLNLASFV+TWMEPEC+KL+ Sbjct: 18 TFASRYVQEPLPKFKMPKKSMPKEAAYQIVNDELMLDGNPRLNLASFVSTWMEPECDKLI 77 Query: 234 MDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLA 413 M SINKNYVDMDEYPVTTELQNRCVNM+AHLF+AP+G+ ETAVGVGTVGSSEAIMLAGLA Sbjct: 78 MSSINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGDDETAVGVGTVGSSEAIMLAGLA 137 Query: 414 FKRRWQNR 437 FKR+WQ++ Sbjct: 138 FKRKWQSK 145
>DCE_LACLA (Q9CG20) Glutamate decarboxylase (EC 4.1.1.15) (GAD)| Length = 466 Score = 132 bits (331), Expect = 5e-31 Identities = 64/127 (50%), Positives = 86/127 (67%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F S + LP+Y++ + SI AYQ++ DE++ +GN RLNLA+F T+MEPE KLM Sbjct: 18 FGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMS 77 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 ++ KN +D EYP TTE++NRCVNMIA L+NA E E +G T+GSSEA ML G+A Sbjct: 78 QTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA--SEKEKFMGTSTIGSSEACMLGGMAM 135 Query: 417 KRRWQNR 437 K W+ R Sbjct: 136 KFSWRKR 142
>DCE_LACLC (O30418) Glutamate decarboxylase (EC 4.1.1.15)| Length = 466 Score = 129 bits (323), Expect = 4e-30 Identities = 63/127 (49%), Positives = 84/127 (66%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F S + LP+Y++ + SI AYQ++ DE++ +GN RLNLA+F T+MEPE KLM Sbjct: 18 FGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMS 77 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 ++ KN +D EYP TTE++NRCVNMIA L+NA E G T+GSSEA ML G+A Sbjct: 78 QTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA--SEKGKIYGTSTIGSSEACMLGGMAM 135 Query: 417 KRRWQNR 437 K W+ R Sbjct: 136 KFSWRKR 142
>DCEB_SHIFL (P69912) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 466 Score = 122 bits (305), Expect = 5e-28 Identities = 60/127 (47%), Positives = 82/127 (64%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 417 KRRWQNR 437 K RW+ R Sbjct: 138 KWRWRKR 144
>DCEB_ECOLI (P69910) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 466 Score = 122 bits (305), Expect = 5e-28 Identities = 60/127 (47%), Positives = 82/127 (64%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 417 KRRWQNR 437 K RW+ R Sbjct: 138 KWRWRKR 144
>DCEB_ECOL6 (Q8FHG5) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 466 Score = 122 bits (305), Expect = 5e-28 Identities = 60/127 (47%), Positives = 82/127 (64%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDDNVHKLMD 77 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 417 KRRWQNR 437 K RW+ R Sbjct: 138 KWRWRKR 144
>DCEB_ECO57 (P69911) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 466 Score = 122 bits (305), Expect = 5e-28 Identities = 60/127 (47%), Positives = 82/127 (64%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 417 KRRWQNR 437 K RW+ R Sbjct: 138 KWRWRKR 144
>DCEA_SHIFL (Q83PR1) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 466 Score = 122 bits (305), Expect = 5e-28 Identities = 60/127 (47%), Positives = 82/127 (64%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 417 KRRWQNR 437 K RW+ R Sbjct: 138 KWRWRKR 144
>DCEA_ECOLI (P69908) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 466 Score = 122 bits (305), Expect = 5e-28 Identities = 60/127 (47%), Positives = 82/127 (64%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 417 KRRWQNR 437 K RW+ R Sbjct: 138 KWRWRKR 144
>DCEA_ECOL6 (P69909) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 466 Score = 122 bits (305), Expect = 5e-28 Identities = 60/127 (47%), Positives = 82/127 (64%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 417 KRRWQNR 437 K RW+ R Sbjct: 138 KWRWRKR 144
>DCEA_ECO57 (P58228) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 466 Score = 122 bits (305), Expect = 5e-28 Identities = 60/127 (47%), Positives = 82/127 (64%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F ++ + R P + + + A+QIINDEL LDGN R NLA+F TW + +KLM Sbjct: 18 FGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMD 77 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 SINKN++D +EYP + + RCVNM+A L++AP + AVG T+GSSEA ML G+A Sbjct: 78 LSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM 137 Query: 417 KRRWQNR 437 K RW+ R Sbjct: 138 KWRWRKR 144
>DCEC_LISMO (Q8Y4K4) Probabl glutamate decarboxylase gamma (EC 4.1.1.15)| (GAD-gamma) Length = 467 Score = 120 bits (301), Expect = 1e-27 Identities = 60/126 (47%), Positives = 83/126 (65%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F S S+P+Y + + + AYQ++ D+LM +GN R NLA+F T+ME E LM Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMA 78 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 +++ KN +D EYP T EL+NRCVN++A L+NAP + + +G TVGSSEA ML GLA Sbjct: 79 ETLEKNAIDKSEYPQTAELENRCVNILADLWNAP--KDMSYLGTSTVGSSEACMLGGLAM 136 Query: 417 KRRWQN 434 K RW+N Sbjct: 137 KFRWRN 142
>DCEC_LISIN (Q928K4) Probabl glutamate decarboxylase gamma (EC 4.1.1.15)| (GAD-gamma) Length = 467 Score = 120 bits (301), Expect = 1e-27 Identities = 60/126 (47%), Positives = 83/126 (65%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F S S+P+Y + + + AYQ++ D+LM +GN R NLA+F T+ME E LM Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMA 78 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 +++ KN +D EYP T EL+NRCVN++A L+NAP + + +G TVGSSEA ML GLA Sbjct: 79 ETLEKNAIDKSEYPQTAELENRCVNILADLWNAP--KEMSYLGTSTVGSSEACMLGGLAM 136 Query: 417 KRRWQN 434 K RW+N Sbjct: 137 KFRWRN 142
>DCE_YEAST (Q04792) Glutamate decarboxylase (EC 4.1.1.15) (GAD)| Length = 585 Score = 119 bits (297), Expect = 4e-27 Identities = 56/116 (48%), Positives = 80/116 (68%) Frame = +3 Query: 90 RYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMMDSINKNYVDMD 269 +Y +P+ +P + +YQ+I++EL LDGNP LNLASFV T+ + KL+ +++ KN D D Sbjct: 59 KYSVPKKGLPADLSYQLIHNELTLDGNPHLNLASFVNTFTTDQARKLIDENLTKNLADND 118 Query: 270 EYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAFKRRWQNR 437 EYP EL RC++M+A L++A E +G T GSSEAIML GLA K+RW++R Sbjct: 119 EYPQLIELTQRCISMLAQLWHA--NPDEEPIGCATTGSSEAIMLGGLAMKKRWEHR 172
>DCEB_LISIN (Q928R9) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 464 Score = 114 bits (284), Expect = 1e-25 Identities = 55/127 (43%), Positives = 82/127 (64%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F S +P+Y + + + AY+++ DEL+ +G+ R NLA+F T+ME E KLM Sbjct: 16 FGSSAEDRDIPKYTLAKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMS 75 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 +++ KN +D EYP T EL+NRCVN+IA L++AP + + +G T+GSSEA ML G+A Sbjct: 76 ETLEKNAIDKSEYPRTAELENRCVNIIADLWHAP--KDQKFMGTSTIGSSEACMLGGMAM 133 Query: 417 KRRWQNR 437 K W+ R Sbjct: 134 KFAWRKR 140
>DCEB_LISMO (Q9EYW9) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)| Length = 464 Score = 113 bits (283), Expect = 2e-25 Identities = 55/127 (43%), Positives = 82/127 (64%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMM 236 F S +P+Y + + + AY+++ DEL+ +G+ R NLA+F T+ME E KLM Sbjct: 16 FGSSAEDRDIPKYTLGKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMS 75 Query: 237 DSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAF 416 +++ KN +D EYP T EL+NRCVN+IA L++AP + + +G T+GSSEA ML G+A Sbjct: 76 ETLEKNAIDKSEYPRTAELENRCVNIIADLWHAP--KDQKFMGTSTIGSSEACMLGGMAM 133 Query: 417 KRRWQNR 437 K W+ R Sbjct: 134 KFAWRKR 140
>DCEA_LISMO (Q9F5P3) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)| Length = 462 Score = 112 bits (281), Expect = 3e-25 Identities = 54/117 (46%), Positives = 81/117 (69%) Frame = +3 Query: 84 LPRYRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMMDSINKNYVD 263 LP RM + S+ AYQ++ D+L+ +G+ R NLA+F T+MEPE ++M +++ KN +D Sbjct: 23 LPEKRMNKESVDPRIAYQLVKDQLIDEGSARQNLATFCQTYMEPEAEQIMAETMEKNAID 82 Query: 264 MDEYPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAFKRRWQN 434 EYP T +L++ CVNM+A L+N + E+E +G TVGSSEA ML G+A K RW++ Sbjct: 83 KSEYPQTAKLESSCVNMLADLWN--VDESEHYMGTSTVGSSEACMLGGMAMKFRWRS 137
>NUAK1_HUMAN (O60285) NUAK family, SNF1-like kinase 1 (EC 2.7.11.1)| (AMPK-related protein kinase 5) Length = 661 Score = 32.3 bits (72), Expect = 0.52 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Frame = +2 Query: 86 AKVPDAGELDPQGSGVPDHQRRADAGREPAAEP----GVLRHHLDGARVQQAHDGLHQQE 253 A P AG+ G G P R A AG A EP GV RHH H+ H+ E Sbjct: 4 AAAPVAGDRPDLGLGAPGSPREAVAGATAALEPRKPHGVKRHH-------HKHNLKHRYE 56 Query: 254 LRR------HGRVPR 280 L+ +G+V R Sbjct: 57 LQETLGKGTYGKVKR 71
>CDC27_HUMAN (P30260) Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC)| Length = 824 Score = 31.2 bits (69), Expect = 1.2 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Frame = +3 Query: 57 FASRYVRASLPRYRMPENSIPKEA-AYQIINDELMLDGNPRLNLASFVTTW---MEPE-C 221 FA+ +++L + +PKE+ Y +I G L L +F +W ++P+ Sbjct: 714 FANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNF--SWAMDLDPKGA 771 Query: 222 NKLMMDSINKNYVDMDEYPVTTELQ 296 N + ++I+K Y+ DE P+T E Q Sbjct: 772 NNQIKEAIDKRYLPDDEEPITQEEQ 796
>Y616_FRATT (Q5NH55) UPF0054 protein FTT0616c| Length = 168 Score = 31.2 bits (69), Expect = 1.2 Identities = 12/34 (35%), Positives = 26/34 (76%), Gaps = 1/34 (2%) Frame = +3 Query: 225 KLMMDSINKNYVDMDEYPV-TTELQNRCVNMIAH 323 KL MD++N N+++ DE+P+ + +L +C+ ++A+ Sbjct: 4 KLKMDNLNINFINDDEHPIPSQDLLLKCLQLVAN 37
>ITA5_BOVIN (Q27977) Integrin alpha-5 (Fibronectin receptor alpha subunit)| (Integrin alpha-F) (VLA-5) (CD49e antigen) (Fragment) Length = 385 Score = 30.4 bits (67), Expect = 2.0 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Frame = +2 Query: 95 PDAGELDPQGSGVPDHQRRADAGREPAAE-PGVLR-HHLDGARVQQAHDGLHQQELRRHG 268 P+ ELDP+GS QRR GR PA+ P +L+ + +++ LH+QE R Sbjct: 234 PEGLELDPEGSQHHRLQRRMFLGRSPASSGPQILKCPEAECFKLRCELGPLHRQESRSLQ 293 Query: 269 RVPRHHRAPEPMREHDRASLQ 331 R REH SLQ Sbjct: 294 LHFRVWAKAFLQREHQPFSLQ 314
>CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25| Length = 447 Score = 30.4 bits (67), Expect = 2.0 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Frame = +2 Query: 137 DH--QRRADAGREPAAEPGVLRHHLDGARVQQAHDGLHQQELRRHGRVPRHHRAPEPMRE 310 DH +RR+ A R P+ G H+ D R + DG H R R+H PE R Sbjct: 286 DHSTRRRSYADRSPSPRRG--NHYYDRRRTEDRSDGYH--------RDSRNHDRPEFYRG 335 Query: 311 HDR 319 +DR Sbjct: 336 NDR 338
>LPQT_MYCBO (Q7U0V0) Putative lipoprotein lpqT precursor| Length = 252 Score = 29.6 bits (65), Expect = 3.4 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +2 Query: 161 GREPAAEPGVLRHHLDGARVQQA---HDGLHQQELRRHGRV 274 G AA PG HH G R +QA H G H++ +RR G+V Sbjct: 186 GAGQAALPGAAHHHESGQRGRQARFRHRGDHRR-IRRRGKV 225
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 29.6 bits (65), Expect = 3.4 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +2 Query: 221 QQAHDGLHQQELRRHGRVPRHHRAPEPMREHDRASLQR 334 QQ H QQ+ ++H + +HH+ +P ++H Q+ Sbjct: 203 QQQHHQQQQQQQQQHHQQQQHHQHSQPQQQHQHNQQQQ 240
>LRC8E_XENLA (Q6NU09) Leucine-rich repeat-containing protein 8E| Length = 806 Score = 29.6 bits (65), Expect = 3.4 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = -1 Query: 430 CQRLLKASPASMMASEEPTVPTPTAVSVSPR 338 CQ + S AS + E TVP PTA S PR Sbjct: 69 CQEFTQQSSASNDSDLETTVPPPTATSSPPR 99
>RNB_HHV1M (P56958) RNA-binding protein (Vmw21)| Length = 161 Score = 28.9 bits (63), Expect = 5.8 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 10/93 (10%) Frame = +2 Query: 92 VPDAGELDPQGSGVPDHQRRADAG------REPAA----EPGVLRHHLDGARVQQAHDGL 241 VP AG + P+G P R +G + AA + G+LR D + + + + Sbjct: 22 VPSAG-MHPRGVHAPRGHPRMISGPPQRGDNDQAAGQCGDSGLLRVGAD-TTISKPSEAV 79 Query: 242 HQQELRRHGRVPRHHRAPEPMREHDRASLQRSS 340 + R RVPR R P P RE + R+S Sbjct: 80 RPPTIPRTPRVPREPRVPRPPREPREPRVPRAS 112
>LRC8E_XENTR (Q68F79) Leucine-rich repeat-containing protein 8E| Length = 806 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 430 CQRLLKASPASMMASEEPTVPTPTAVSVSPR 338 CQ + SP S + E T+P PTA S PR Sbjct: 69 CQEYDQQSPPSNDSDLETTIPPPTATSSPPR 99
>MFNA_PYRAB (Q9UZD5) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)| Length = 384 Score = 28.9 bits (63), Expect = 5.8 Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 1/109 (0%) Frame = +3 Query: 96 RMPENSIPKEAAYQIINDELMLDGN-PRLNLASFVTTWMEPECNKLMMDSINKNYVDMDE 272 + PE +P+E ++ D+ +D + + T ++ I++N D Sbjct: 3 KFPEKGLPREEVLNLLEDKTKVDLTFSSGKILGSMCTMPHELAIEVFARYIDRNLGDPGL 62 Query: 273 YPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAFK 419 +P T +++ + M++ L + E G G +EA +LA AF+ Sbjct: 63 HPGTRKIEEEVIEMLSDLLH-----LEKGYGHIVSGGTEANILAVRAFR 106
>MFNA_PYRHO (O58679) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)| Length = 383 Score = 28.9 bits (63), Expect = 5.8 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 1/109 (0%) Frame = +3 Query: 96 RMPENSIPKEAAYQIINDELMLDGN-PRLNLASFVTTWMEPECNKLMMDSINKNYVDMDE 272 + P +PKE ++IN++ D + + T ++ I++N D Sbjct: 2 KFPRIGLPKEKVIELINEKTKKDLTFSSGKILGSMCTMPHDLAIEVYTKYIDRNLGDPGL 61 Query: 273 YPVTTELQNRCVNMIAHLFNAPLGETETAVGVGTVGSSEAIMLAGLAFK 419 +P T +++ + MI+ L + G G G +EA +LA AF+ Sbjct: 62 HPGTRKIEEEVIEMISDLLHLEKGH-----GHIVSGGTEANILAVRAFR 105
>DBP5_CRYNE (Q5KBP5) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 546 Score = 28.5 bits (62), Expect = 7.6 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = -1 Query: 400 SMMASEEPTVPTPTAVSVSPRGALKR 323 +M++ +PT+PTP A+ ++P L R Sbjct: 207 NMLSRVDPTIPTPQAICIAPSRELAR 232
>RNH2_GEOKA (Q5L0P0) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 260 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +2 Query: 242 HQQELRRHGRVPRHHRAPEPMREHDRASLQ 331 H + +RR+G P H R+ P+RE +AS Q Sbjct: 230 HFEAIRRYGVTPEHRRSFAPVREVLKASEQ 259
>TLK1_CAEEL (P34314) Serine/threonine-protein kinase tousled-like 1 (EC| 2.7.11.1) (Tousled-like kinase 1) Length = 965 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/67 (20%), Positives = 30/67 (44%) Frame = +2 Query: 134 PDHQRRADAGREPAAEPGVLRHHLDGARVQQAHDGLHQQELRRHGRVPRHHRAPEPMREH 313 P Q + + ++P L+H + + + A + +E +HG P+ AP+ Sbjct: 211 PQQQSQQQSAQQPQQSSAALQHVNESSNLSSA-GSISDREPEQHGGTPQRPTAPQSSTAT 269 Query: 314 DRASLQR 334 D+ + +R Sbjct: 270 DKKTRKR 276
>AF9_USTMA (Q4PFI5) Protein AF-9 homolog| Length = 431 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = +2 Query: 95 PDAGELDPQGSGVPDHQRRADAGRE--PAAEPGV 190 PD+ E+DP S + Q DA E P AEP V Sbjct: 238 PDSMEVDPTASSTTEQQTSTDAKVESTPVAEPAV 271
>TRMD_SILPO (Q5LNE6) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)| (M1G-methyltransferase) (tRNA [GM37] methyltransferase) Length = 243 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +2 Query: 170 PAAEPGVLRHHLDGARVQQAHDGLHQQELRRHGRVPRHHRAPE 298 P A PGVL L G +Q LH +LRR G V +H + Sbjct: 20 PQAFPGVLGESLTGKALQDGLWQLHTTDLRRFG-VGKHRNVDD 61
>SLIT1_RAT (O88279) Slit homolog 1 protein precursor (Slit-1) (Multiple| epidermal growth factor-like domains 4) Length = 1531 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 213 PECNKLMMDSINKNYVDMDEYPVTTELQN 299 PEC KL+ + N+VD D Y T+LQN Sbjct: 1157 PECEKLL----SVNFVDRDTYLQFTDLQN 1181
>SLIT1_MOUSE (Q80TR4) Slit homolog 1 protein precursor (Slit-1)| Length = 1531 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 213 PECNKLMMDSINKNYVDMDEYPVTTELQN 299 PEC KL+ + N+VD D Y T+LQN Sbjct: 1157 PECEKLL----SVNFVDRDTYLQFTDLQN 1181
>V2A_CCMV (P20179) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)| Length = 808 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/88 (20%), Positives = 39/88 (44%) Frame = +3 Query: 171 PRLNLASFVTTWMEPECNKLMMDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGET 350 P L++ SF K ++ ++ K D+ E + +++ + A L + Sbjct: 296 PELSIGSFQR---RIGTQKTVLTALKKRNADVPELADSVDIKRVACEVAEKFKRAYLNHS 352 Query: 351 ETAVGVGTVGSSEAIMLAGLAFKRRWQN 434 G+G +G S +M GL + ++W++ Sbjct: 353 ----GIGLLGQSMDVMSRGLEYHKKWKD 376
>CPSF7_RAT (Q5XI29) Cleavage and polyadenylation specificity factor 7| Length = 462 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/63 (30%), Positives = 23/63 (36%) Frame = +2 Query: 125 SGVPDHQRRADAGREPAAEPGVLRHHLDGARVQQAHDGLHQQELRRHGRVPRHHRAPEPM 304 SG +R R P+ R H D + HD Q+ R H R HR E Sbjct: 404 SGSSSRKRHRSRERSPSRSRESSRRHRDLLHNEDRHDDYFQERNREHER----HRDRERD 459 Query: 305 REH 313 R H Sbjct: 460 RHH 462
>LOXL3_MOUSE (Q9Z175) Lysyl oxidase homolog 3 precursor (EC 1.4.3.-) (Lysyl| oxidase-like protein 3) (Lysyl oxidase-related protein 2) Length = 754 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +2 Query: 185 GVLRHHLDGARVQQAHDGLHQQELRRHGRVPRHHRAP 295 G R L GAR+ Q +H E+R G+ P R P Sbjct: 352 GTAREALSGARMGQGMGAIHLSEVRCSGQEPSLWRCP 388
>SLIT1_HUMAN (O75093) Slit homolog 1 protein precursor (Slit-1) (Multiple| epidermal growth factor-like domains 4) Length = 1534 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 213 PECNKLMMDSINKNYVDMDEYPVTTELQN 299 PEC KL+ + N+VD D Y T+LQN Sbjct: 1160 PECEKLL----SVNFVDRDTYLQFTDLQN 1184
>GATA3_CHICK (P23825) GATA-binding factor 3 (GATA-3) (Transcription factor| NF-E1C) Length = 444 Score = 28.1 bits (61), Expect = 9.9 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 13/85 (15%) Frame = +2 Query: 110 LDPQGSGVPDHQR---RADAGREPAAEPGV------LRHH----LDGARVQQAHDGLHQQ 250 +D QG+ VP + RA R P A G L H LDG++ +H Sbjct: 53 IDGQGNPVPPYYGNSVRATVQRYPTAHHGSQVCRPPLLHGSLPWLDGSKALSSHHSASPW 112 Query: 251 ELRRHGRVPRHHRAPEPMREHDRAS 325 L + HH +P P+ + AS Sbjct: 113 NLSPFSKTSIHHSSPGPLSVYPPAS 137
>CPSF7_MOUSE (Q8BTV2) Cleavage and polyadenylation specificity factor 7| Length = 471 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/63 (30%), Positives = 23/63 (36%) Frame = +2 Query: 125 SGVPDHQRRADAGREPAAEPGVLRHHLDGARVQQAHDGLHQQELRRHGRVPRHHRAPEPM 304 SG +R R P+ R H D + HD Q+ R H R HR E Sbjct: 413 SGSSSRKRHRSRERSPSRSRESSRRHRDLLHNEDRHDDYFQERNREHER----HRDRERD 468 Query: 305 REH 313 R H Sbjct: 469 RHH 471
>CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity factor 7| (Cleavage and polyadenylation specificity factor 59 kDa subunit) (CPSF 59 kDa subunit) (Pre-mRNA cleavage factor Im 59-kDa subunit) Length = 471 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/63 (30%), Positives = 23/63 (36%) Frame = +2 Query: 125 SGVPDHQRRADAGREPAAEPGVLRHHLDGARVQQAHDGLHQQELRRHGRVPRHHRAPEPM 304 SG +R R P+ R H D + HD Q+ R H R HR E Sbjct: 413 SGSSSRKRHRSRERSPSRSRESSRRHRDLLHNEDRHDDYFQERNREHER----HRDRERD 468 Query: 305 REH 313 R H Sbjct: 469 RHH 471 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,866,725 Number of Sequences: 219361 Number of extensions: 911157 Number of successful extensions: 3974 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 3780 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3958 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
