>KGP1_DROME (Q03042) cGMP-dependent protein kinase, isozyme 1 (EC 2.7.11.12)|
           (CGK)
          Length = 768

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 343 SPMACTSASSRHGRRVASAVAPRALAREMKSSG 245
           SP+A TS++S  GR  A  V P+A+   +K  G
Sbjct: 113 SPLASTSSASPSGRTSADEVRPKAMPAAIKKQG 145

>PRAF1_CANFA (Q8HY39) Prenylated Rab acceptor protein 1 (PRA1 family protein 1)|
          Length = 185

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 294 ATRRPWRELADVHAIGLPPSLGDAYLRVRANLAHFAMNY 410
           AT RPW    D      P +LG+   R+  N+ ++  NY
Sbjct: 40  ATIRPWSSFVDQRRFSRPRNLGELCQRLVRNVEYYQSNY 78

>PRA1_YEAST (P53633) Prenylated Rab acceptor 1|
          Length = 176

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 291 LATRRPWRELADVHAIGLPPSLGDAYLRVRANLAHFAMNYAI 416
           LAT R  +E  +   I  P + G+   RV  NL +F+ NY +
Sbjct: 33  LATLRTPQEFFNFKKISKPQNFGEVQSRVAYNLKYFSSNYGL 74

>PRAF1_HUMAN (Q9UI14) Prenylated Rab acceptor protein 1 (PRA1 family protein 1)|
          Length = 185

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 294 ATRRPWRELADVHAIGLPPSLGDAYLRVRANLAHFAMNY 410
           AT RPW    D      P +LG+   R+  N+ ++  NY
Sbjct: 40  ATIRPWSTFVDQQRFSRPRNLGELCQRLVRNVEYYQSNY 78


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,280,186
Number of Sequences: 219361
Number of extensions: 279207
Number of successful extensions: 817
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)